View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2479_low_32 (Length: 409)

Name: NF2479_low_32
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2479_low_32
NF2479_low_32
[»] chr7 (62 HSPs)
chr7 (225-404)||(37517710-37517891)
chr7 (225-409)||(43737621-43737807)
chr7 (229-405)||(9152321-9152497)
chr7 (225-349)||(19225102-19225226)
chr7 (225-349)||(36629736-36629860)
chr7 (225-391)||(19818909-19819075)
chr7 (225-347)||(42925144-42925266)
chr7 (225-359)||(24041684-24041818)
chr7 (225-323)||(36468079-36468177)
chr7 (225-342)||(47203017-47203134)
chr7 (225-405)||(3936517-3936697)
chr7 (225-405)||(42864548-42864728)
chr7 (225-342)||(8155428-8155545)
chr7 (225-342)||(31643577-31643694)
chr7 (225-369)||(36408886-36409029)
chr7 (3-88)||(42925414-42925499)
chr7 (3-85)||(9152091-9152173)
chr7 (3-85)||(37518040-37518122)
chr7 (225-339)||(18951380-18951494)
chr7 (10-88)||(19225372-19225450)
chr7 (12-110)||(36468291-36468389)
chr7 (225-338)||(3304261-3304374)
chr7 (231-359)||(24689829-24689958)
chr7 (3-88)||(47202787-47202872)
chr7 (10-88)||(31985291-31985369)
chr7 (3-88)||(43737382-43737467)
chr7 (235-319)||(6467837-6467921)
chr7 (12-85)||(7115046-7115119)
chr7 (3-88)||(19818680-19818764)
chr7 (3-88)||(31643340-31643425)
chr7 (25-88)||(24041971-24042034)
chr7 (21-88)||(33573822-33573889)
chr7 (3-85)||(42864878-42864961)
chr7 (12-75)||(43186094-43186157)
chr7 (15-86)||(48705775-48705846)
chr7 (3-85)||(3304528-3304610)
chr7 (10-84)||(8155206-8155280)
chr7 (225-295)||(26554721-26554791)
chr7 (3-85)||(36629503-36629585)
chr7 (14-79)||(8214377-8214442)
chr7 (12-85)||(16278322-16278395)
chr7 (39-88)||(26554937-26554986)
chr7 (12-78)||(5731063-5731128)
chr7 (39-88)||(28230266-28230315)
chr7 (39-85)||(6466914-6466960)
chr7 (225-322)||(31985072-31985170)
chr7 (19-84)||(30861399-30861464)
chr7 (225-339)||(33573566-33573676)
chr7 (12-88)||(32701034-32701110)
chr7 (39-85)||(1519050-1519096)
chr7 (225-286)||(28230054-28230115)
chr7 (225-282)||(30861603-30861660)
chr7 (42-110)||(36408702-36408776)
chr7 (19-88)||(47239492-47239561)
chr7 (54-85)||(37217509-37217540)
chr7 (80-110)||(1519109-1519139)
chr7 (80-110)||(36629600-36629630)
chr7 (80-110)||(43737476-43737506)
chr7 (81-110)||(19818774-19818803)
chr7 (3-56)||(33151502-33151555)
chr7 (24-76)||(24690122-24690174)
chr7 (80-108)||(42864835-42864863)
[»] chr2 (56 HSPs)
chr2 (225-372)||(4268096-4268243)
chr2 (225-372)||(41509908-41510055)
chr2 (225-405)||(44465194-44465376)
chr2 (225-408)||(32187321-32187506)
chr2 (245-405)||(16749888-16750050)
chr2 (225-405)||(17474236-17474417)
chr2 (225-372)||(33451937-33452084)
chr2 (228-372)||(45153380-45153524)
chr2 (3-110)||(33452189-33452296)
chr2 (225-406)||(8450827-8451010)
chr2 (225-372)||(38308319-38308467)
chr2 (230-369)||(25217254-25217393)
chr2 (225-329)||(36948644-36948748)
chr2 (236-352)||(39447690-39447806)
chr2 (3-85)||(42894677-42894759)
chr2 (3-88)||(25217543-25217628)
chr2 (3-88)||(44465509-44465594)
chr2 (225-397)||(41854348-41854517)
chr2 (3-85)||(17474570-17474652)
chr2 (225-302)||(42894909-42894986)
chr2 (277-359)||(15994636-15994718)
chr2 (10-110)||(38308572-38308679)
chr2 (10-88)||(27670803-27670881)
chr2 (10-88)||(34517410-34517488)
chr2 (10-88)||(41854672-41854750)
chr2 (225-302)||(38065123-38065200)
chr2 (12-88)||(17133034-17133110)
chr2 (20-88)||(39447474-39447542)
chr2 (15-110)||(11457264-11457358)
chr2 (34-85)||(16750216-16750267)
chr2 (20-86)||(15994890-15994956)
chr2 (10-84)||(38065350-38065424)
chr2 (10-88)||(41202958-41203036)
chr2 (40-88)||(5507757-5507805)
chr2 (30-85)||(32187656-32187711)
chr2 (3-85)||(41510201-41510283)
chr2 (20-81)||(30763967-30764028)
chr2 (50-103)||(41204267-41204320)
chr2 (12-78)||(25715770-25715835)
chr2 (23-85)||(33440282-33440344)
chr2 (225-349)||(34517643-34517766)
chr2 (65-110)||(19109768-19109813)
chr2 (225-282)||(27671034-27671091)
chr2 (12-88)||(9847075-9847150)
chr2 (40-84)||(35251269-35251313)
chr2 (41-110)||(8388980-8389056)
chr2 (39-85)||(36948805-36948851)
chr2 (236-336)||(8389180-8389281)
chr2 (39-88)||(42604795-42604844)
chr2 (80-110)||(5507814-5507844)
chr2 (33-83)||(27900387-27900437)
chr2 (80-110)||(34517500-34517530)
chr2 (80-110)||(42894772-42894802)
chr2 (12-85)||(9847286-9847358)
chr2 (12-88)||(12885271-12885347)
chr2 (12-84)||(45293938-45294010)
[»] chr1 (70 HSPs)
chr1 (225-405)||(32817253-32817435)
chr1 (225-372)||(44572589-44572736)
chr1 (229-405)||(45046309-45046485)
chr1 (225-405)||(34162235-34162417)
chr1 (229-372)||(40907411-40907554)
chr1 (225-372)||(49677977-49678124)
chr1 (225-349)||(17000843-17000967)
chr1 (225-405)||(40650152-40650333)
chr1 (225-372)||(45567384-45567530)
chr1 (3-102)||(45046610-45046709)
chr1 (225-359)||(41584093-41584227)
chr1 (242-405)||(42546479-42546643)
chr1 (225-322)||(52744387-52744484)
chr1 (225-372)||(38885747-38885892)
chr1 (269-372)||(7011789-7011892)
chr1 (225-339)||(23443263-23443377)
chr1 (225-359)||(34006797-34006931)
chr1 (225-339)||(44937804-44937918)
chr1 (225-342)||(32542744-32542861)
chr1 (23-110)||(49677783-49677870)
chr1 (225-337)||(667190-667303)
chr1 (225-405)||(4615413-4615595)
chr1 (3-88)||(42546268-42546352)
chr1 (20-110)||(41584332-41584423)
chr1 (225-383)||(15069380-15069541)
chr1 (226-320)||(33610935-33611029)
chr1 (3-88)||(18583318-18583403)
chr1 (11-88)||(28866404-28866481)
chr1 (225-342)||(49786812-49786929)
chr1 (225-349)||(6223255-6223381)
chr1 (3-85)||(41584442-41584524)
chr1 (39-88)||(40650478-40650527)
chr1 (3-88)||(49786568-49786653)
chr1 (3-88)||(52744617-52744702)
chr1 (12-84)||(9445967-9446038)
chr1 (20-88)||(27795147-27795215)
chr1 (10-85)||(6223530-6223604)
chr1 (225-308)||(18583090-18583173)
chr1 (10-85)||(40907711-40907786)
chr1 (22-88)||(38885532-38885598)
chr1 (12-85)||(24472605-24472678)
chr1 (225-339)||(24472342-24472457)
chr1 (12-78)||(800677-800742)
chr1 (52-110)||(34162532-34162590)
chr1 (276-329)||(28866175-28866228)
chr1 (10-85)||(34006568-34006642)
chr1 (23-85)||(33611187-33611249)
chr1 (53-102)||(17000670-17000719)
chr1 (3-88)||(23443038-23443123)
chr1 (30-88)||(42929208-42929266)
chr1 (3-77)||(44572885-44572959)
chr1 (20-85)||(8704295-8704360)
chr1 (225-302)||(9445714-9445791)
chr1 (12-85)||(43319062-43319134)
chr1 (229-265)||(27795346-27795382)
chr1 (41-88)||(3561109-3561156)
chr1 (39-82)||(38131221-38131264)
chr1 (30-85)||(44037191-44037246)
chr1 (39-85)||(6099718-6099764)
chr1 (39-85)||(6099898-6099944)
chr1 (20-74)||(27400069-27400123)
chr1 (80-110)||(38885603-38885633)
chr1 (80-110)||(42546362-42546392)
chr1 (80-110)||(45567643-45567673)
chr1 (81-110)||(3561067-3561096)
chr1 (47-88)||(44938073-44938114)
chr1 (81-110)||(52744574-52744603)
chr1 (39-83)||(11384305-11384349)
chr1 (80-108)||(24472562-24472590)
chr1 (80-108)||(40907669-40907697)
[»] chr8 (53 HSPs)
chr8 (225-405)||(42280346-42280528)
chr8 (225-405)||(40995190-40995372)
chr8 (225-405)||(9074061-9074243)
chr8 (225-369)||(8884935-8885079)
chr8 (225-405)||(11697764-11697946)
chr8 (225-372)||(44106747-44106894)
chr8 (225-406)||(14163492-14163677)
chr8 (225-405)||(27927397-27927579)
chr8 (225-409)||(28917311-28917497)
chr8 (225-405)||(11698602-11698784)
chr8 (236-405)||(34853861-34854030)
chr8 (225-330)||(3095221-3095326)
chr8 (225-373)||(21594312-21594461)
chr8 (236-405)||(34854245-34854414)
chr8 (225-317)||(21004849-21004941)
chr8 (3-88)||(8885226-8885311)
chr8 (3-85)||(42280668-42280750)
chr8 (3-85)||(11698093-11698175)
chr8 (225-342)||(31519398-31519515)
chr8 (12-84)||(7981825-7981897)
chr8 (228-339)||(17119384-17119496)
chr8 (3-86)||(28917075-28917158)
chr8 (13-87)||(40994980-40995054)
chr8 (3-87)||(3094985-3095069)
chr8 (3-110)||(34853628-34853742)
chr8 (12-84)||(36980878-36980950)
chr8 (3-88)||(31519668-31519751)
chr8 (39-103)||(32504095-32504159)
chr8 (12-85)||(31234598-31234672)
chr8 (12-84)||(33472286-33472358)
chr8 (30-85)||(4259459-4259514)
chr8 (10-88)||(10840527-10840605)
chr8 (12-85)||(10833386-10833458)
chr8 (12-85)||(24627789-24627861)
chr8 (12-85)||(24627998-24628070)
chr8 (12-88)||(36318105-36318181)
chr8 (30-85)||(27927727-27927782)
chr8 (225-302)||(4259236-4259314)
chr8 (39-85)||(9073855-9073901)
chr8 (30-88)||(14163831-14163889)
chr8 (225-307)||(36407249-36407331)
chr8 (20-85)||(6395401-6395466)
chr8 (225-282)||(10840314-10840371)
chr8 (51-88)||(11698445-11698482)
chr8 (46-87)||(17119655-17119696)
chr8 (30-87)||(40328225-40328281)
chr8 (24-88)||(27234597-27234661)
chr8 (45-88)||(28219004-28219047)
chr8 (79-110)||(44106611-44106642)
chr8 (225-263)||(40328437-40328475)
chr8 (12-85)||(41530891-41530963)
chr8 (81-109)||(3095085-3095113)
chr8 (80-108)||(36980963-36980991)
[»] chr3 (80 HSPs)
chr3 (225-405)||(47739383-47739565)
chr3 (225-405)||(33439706-33439890)
chr3 (225-405)||(46622249-46622429)
chr3 (236-372)||(3351542-3351678)
chr3 (229-405)||(3902254-3902432)
chr3 (225-404)||(35142610-35142789)
chr3 (225-408)||(39150312-39150495)
chr3 (225-405)||(50716781-50716963)
chr3 (225-405)||(50795884-50796066)
chr3 (225-405)||(49095657-49095838)
chr3 (225-342)||(2358125-2358242)
chr3 (225-357)||(38977244-38977374)
chr3 (225-349)||(41301434-41301558)
chr3 (225-339)||(500693-500807)
chr3 (225-329)||(26053262-26053366)
chr3 (225-372)||(47130871-47131018)
chr3 (269-359)||(52777792-52777882)
chr3 (47-110)||(39150146-39150209)
chr3 (3-110)||(46622547-46622654)
chr3 (236-342)||(3938728-3938834)
chr3 (225-342)||(8657655-8657772)
chr3 (3-110)||(3902551-3902665)
chr3 (3-88)||(34821117-34821202)
chr3 (3-88)||(35142373-35142458)
chr3 (272-372)||(54588226-54588326)
chr3 (225-320)||(47302534-47302629)
chr3 (10-88)||(28873313-28873391)
chr3 (225-329)||(41485818-41485921)
chr3 (10-88)||(47302326-47302404)
chr3 (10-84)||(51258711-51258785)
chr3 (3-88)||(2358396-2358481)
chr3 (3-86)||(3938482-3938565)
chr3 (3-88)||(4394279-4394364)
chr3 (12-84)||(29048639-29048711)
chr3 (14-85)||(500963-501034)
chr3 (3-85)||(51540404-51540486)
chr3 (20-110)||(51816531-51816621)
chr3 (12-85)||(45244606-45244678)
chr3 (3-88)||(50716553-50716638)
chr3 (3-88)||(50796209-50796294)
chr3 (20-88)||(14828690-14828758)
chr3 (20-88)||(35345683-35345751)
chr3 (5-76)||(3351852-3351923)
chr3 (10-85)||(33439494-33439569)
chr3 (47-105)||(21481395-21481453)
chr3 (20-78)||(43471466-43471524)
chr3 (3-68)||(43472762-43472827)
chr3 (41-85)||(30721611-30721655)
chr3 (20-88)||(34009868-34009936)
chr3 (225-281)||(51540200-51540256)
chr3 (11-88)||(38977521-38977599)
chr3 (30-88)||(41300937-41300995)
chr3 (39-84)||(49095995-49096040)
chr3 (39-110)||(47739679-47739756)
chr3 (316-370)||(4394555-4394609)
chr3 (39-85)||(29036140-29036186)
chr3 (225-322)||(51493330-51493428)
chr3 (225-302)||(28873537-28873614)
chr3 (49-86)||(43419905-43419942)
chr3 (47-88)||(47123328-47123369)
chr3 (47-88)||(47130694-47130735)
chr3 (13-85)||(4300054-4300125)
chr3 (40-84)||(11266573-11266617)
chr3 (44-88)||(47769603-47769647)
chr3 (45-88)||(41486058-41486101)
chr3 (80-110)||(3351795-3351825)
chr3 (80-110)||(8657511-8657541)
chr3 (19-85)||(19419734-19419800)
chr3 (80-110)||(35142467-35142497)
chr3 (80-110)||(47123378-47123408)
chr3 (80-110)||(47130744-47130774)
chr3 (80-110)||(49095952-49095982)
chr3 (80-110)||(50716647-50716677)
chr3 (80-110)||(50796170-50796200)
chr3 (80-110)||(51258799-51258829)
chr3 (80-109)||(35345645-35345674)
chr3 (12-61)||(45711886-45711935)
chr3 (12-88)||(8735402-8735476)
chr3 (12-88)||(9087643-9087717)
chr3 (225-281)||(14828491-14828547)
[»] chr6 (48 HSPs)
chr6 (225-405)||(7423440-7423622)
chr6 (225-405)||(2539983-2540167)
chr6 (229-351)||(17264955-17265077)
chr6 (229-359)||(4507798-4507926)
chr6 (225-405)||(7416315-7416497)
chr6 (13-102)||(21514791-21514880)
chr6 (225-349)||(13096696-13096820)
chr6 (247-359)||(2812732-2812844)
chr6 (225-349)||(3716797-3716921)
chr6 (225-339)||(5639633-5639746)
chr6 (225-362)||(9905593-9905731)
chr6 (225-405)||(14587006-14587187)
chr6 (225-320)||(32044752-32044847)
chr6 (225-349)||(5700135-5700259)
chr6 (225-372)||(1945057-1945202)
chr6 (15-88)||(237110-237183)
chr6 (3-88)||(2812996-2813081)
chr6 (3-88)||(4508076-4508161)
chr6 (3-88)||(5639161-5639246)
chr6 (45-110)||(29630716-29630781)
chr6 (3-91)||(17264709-17264797)
chr6 (3-88)||(2539751-2539836)
chr6 (3-88)||(3717056-3717141)
chr6 (30-88)||(5699925-5699983)
chr6 (30-88)||(9905390-9905448)
chr6 (3-88)||(14587335-14587420)
chr6 (225-339)||(4655371-4655486)
chr6 (10-85)||(24604138-24604213)
chr6 (225-288)||(33413200-33413263)
chr6 (42-88)||(7416125-7416171)
chr6 (30-85)||(1945359-1945414)
chr6 (38-85)||(16450553-16450600)
chr6 (42-88)||(7413106-7413152)
chr6 (225-295)||(23407276-23407346)
chr6 (225-307)||(24603910-24603991)
chr6 (225-322)||(29519813-29519911)
chr6 (44-88)||(7423240-7423284)
chr6 (3-86)||(3365959-3366042)
chr6 (39-88)||(29519611-29519661)
chr6 (53-85)||(29289469-29289501)
chr6 (80-110)||(2539845-2539875)
chr6 (43-85)||(8120153-8120195)
chr6 (80-110)||(17264808-17264838)
chr6 (225-295)||(29289257-29289327)
chr6 (80-110)||(29289430-29289460)
chr6 (225-282)||(13799107-13799164)
chr6 (12-85)||(17501297-17501369)
chr6 (225-281)||(14037542-14037598)
[»] chr5 (71 HSPs)
chr5 (225-405)||(31928571-31928753)
chr5 (225-405)||(38692239-38692421)
chr5 (225-405)||(37183233-37183415)
chr5 (225-406)||(38872151-38872334)
chr5 (225-405)||(31220783-31220966)
chr5 (225-405)||(40619433-40619612)
chr5 (225-349)||(33488104-33488228)
chr5 (225-405)||(15799726-15799908)
chr5 (225-359)||(4064289-4064423)
chr5 (225-359)||(20892106-20892240)
chr5 (225-349)||(29863053-29863177)
chr5 (229-372)||(32841454-32841598)
chr5 (225-349)||(38372800-38372924)
chr5 (269-359)||(6157901-6157991)
chr5 (225-369)||(39525250-39525393)
chr5 (3-110)||(39525038-39525145)
chr5 (272-372)||(14112257-14112357)
chr5 (269-354)||(6157676-6157761)
chr5 (225-338)||(12464620-12464733)
chr5 (225-406)||(24203167-24203348)
chr5 (3-87)||(14112127-14112211)
chr5 (3-110)||(37183528-37183640)
chr5 (3-85)||(6156993-6157075)
chr5 (3-88)||(26898577-26898662)
chr5 (3-88)||(31928899-31928984)
chr5 (230-406)||(15958252-15958431)
chr5 (225-320)||(26189849-26189944)
chr5 (10-85)||(32841748-32841823)
chr5 (225-302)||(26898347-26898424)
chr5 (3-87)||(38692557-38692642)
chr5 (225-308)||(7884694-7884777)
chr5 (10-88)||(26190096-26190174)
chr5 (11-88)||(31221114-31221190)
chr5 (12-101)||(41253577-41253666)
chr5 (12-88)||(11185961-11186037)
chr5 (10-85)||(33487880-33487955)
chr5 (42-88)||(27158385-27158431)
chr5 (10-84)||(27212972-27213046)
chr5 (12-85)||(5456327-5456400)
chr5 (3-88)||(7884456-7884541)
chr5 (21-85)||(40619762-40619826)
chr5 (13-84)||(26093731-26093802)
chr5 (10-88)||(20891881-20891959)
chr5 (3-85)||(38372563-38372645)
chr5 (53-110)||(4064530-4064587)
chr5 (3-88)||(12464892-12464977)
chr5 (12-85)||(16429250-16429323)
chr5 (12-85)||(21070636-21070709)
chr5 (12-77)||(28445284-28445348)
chr5 (39-85)||(15799523-15799569)
chr5 (3-85)||(15958011-15958093)
chr5 (39-85)||(18515104-18515150)
chr5 (20-78)||(33331420-33331478)
chr5 (269-342)||(38030770-38030843)
chr5 (17-84)||(26622394-26622461)
chr5 (39-77)||(6800725-6800763)
chr5 (12-78)||(43387944-43388009)
chr5 (225-302)||(6800498-6800575)
chr5 (12-65)||(8739079-8739132)
chr5 (47-88)||(38640938-38640979)
chr5 (44-84)||(5247276-5247316)
chr5 (45-81)||(28083157-28083193)
chr5 (30-85)||(19027338-19027393)
chr5 (42-88)||(5535204-5535250)
chr5 (80-110)||(20891970-20892000)
chr5 (38-88)||(26095367-26095417)
chr5 (39-85)||(28624357-28624403)
chr5 (80-110)||(33487968-33487998)
chr5 (36-78)||(34530208-34530249)
chr5 (39-77)||(42289754-42289792)
chr5 (55-87)||(12847717-12847749)
[»] chr4 (85 HSPs)
chr4 (225-404)||(25490830-25491011)
chr4 (230-372)||(47874262-47874404)
chr4 (236-405)||(54630937-54631108)
chr4 (225-405)||(25751895-25752076)
chr4 (225-405)||(7932143-7932325)
chr4 (225-405)||(46439730-46439912)
chr4 (225-359)||(8106920-8107054)
chr4 (225-390)||(48318545-48318711)
chr4 (225-359)||(55052181-55052315)
chr4 (225-349)||(17932643-17932766)
chr4 (225-405)||(53893465-53893647)
chr4 (3-110)||(48318816-48318923)
chr4 (225-371)||(2505511-2505657)
chr4 (225-359)||(38536719-38536853)
chr4 (225-349)||(40704471-40704595)
chr4 (3-110)||(38417099-38417205)
chr4 (225-342)||(6228327-6228444)
chr4 (225-320)||(41412748-41412843)
chr4 (3-85)||(25752220-25752302)
chr4 (235-329)||(32442363-32442457)
chr4 (225-342)||(27631879-27631996)
chr4 (225-329)||(34973399-34973503)
chr4 (269-344)||(31581958-31582033)
chr4 (3-85)||(7931964-7932046)
chr4 (225-338)||(27741667-27741780)
chr4 (3-88)||(38536479-38536564)
chr4 (3-87)||(46440047-46440131)
chr4 (10-109)||(8106709-8106808)
chr4 (10-85)||(19835835-19835910)
chr4 (10-85)||(25538755-25538830)
chr4 (256-359)||(29823154-29823256)
chr4 (10-83)||(6228592-6228665)
chr4 (3-88)||(18050963-18051048)
chr4 (3-88)||(25491169-25491254)
chr4 (3-88)||(29822888-29822973)
chr4 (3-88)||(34973172-34973257)
chr4 (3-88)||(40703972-40704057)
chr4 (3-88)||(54631266-54631351)
chr4 (4-88)||(53893800-53893884)
chr4 (17-88)||(37222286-37222357)
chr4 (22-88)||(14473989-14474055)
chr4 (3-85)||(17932914-17932996)
chr4 (10-76)||(49001341-49001407)
chr4 (225-302)||(3702808-3702885)
chr4 (225-372)||(49001038-49001186)
chr4 (42-85)||(31582207-31582250)
chr4 (10-88)||(3703029-3703107)
chr4 (42-88)||(20083317-20083363)
chr4 (3-69)||(52089562-52089628)
chr4 (3-91)||(2505801-2505890)
chr4 (292-349)||(19836011-19836068)
chr4 (39-88)||(32601182-32601231)
chr4 (19-88)||(48629340-48629409)
chr4 (53-110)||(55052429-55052486)
chr4 (225-342)||(23524327-23524440)
chr4 (30-88)||(6003447-6003505)
chr4 (12-85)||(4936499-4936572)
chr4 (39-88)||(5803202-5803251)
chr4 (3-88)||(23524095-23524180)
chr4 (12-85)||(42497712-42497785)
chr4 (3-88)||(49397319-49397404)
chr4 (225-337)||(38417298-38417410)
chr4 (42-85)||(47072334-47072377)
chr4 (316-370)||(18050719-18050773)
chr4 (14-76)||(27741899-27741961)
chr4 (20-85)||(41322870-41322934)
chr4 (40-85)||(47784338-47784383)
chr4 (20-85)||(48095639-48095704)
chr4 (242-290)||(42340188-42340236)
chr4 (30-85)||(5043641-5043696)
chr4 (30-85)||(39118482-39118537)
chr4 (225-337)||(41322615-41322729)
chr4 (80-110)||(3702984-3703014)
chr4 (80-110)||(29822982-29823012)
chr4 (80-110)||(31582172-31582202)
chr4 (40-74)||(47456950-47456984)
chr4 (80-110)||(47874119-47874149)
chr4 (80-110)||(54631225-54631255)
chr4 (12-81)||(372238-372307)
chr4 (12-85)||(25140586-25140658)
chr4 (80-108)||(13509463-13509491)
chr4 (46-110)||(20517561-20517624)
chr4 (80-108)||(25491128-25491156)
chr4 (313-341)||(47224535-47224563)
chr4 (30-74)||(53836072-53836116)
[»] scaffold0018 (2 HSPs)
scaffold0018 (225-399)||(173813-173989)
scaffold0018 (3-87)||(174136-174220)
[»] scaffold0508 (2 HSPs)
scaffold0508 (225-359)||(2880-3014)
scaffold0508 (3-85)||(3170-3252)
[»] scaffold0770 (3 HSPs)
scaffold0770 (225-405)||(4319-4501)
scaffold0770 (40-85)||(4122-4167)
scaffold0770 (81-110)||(4185-4214)
[»] scaffold0029 (3 HSPs)
scaffold0029 (225-405)||(102623-102805)
scaffold0029 (40-85)||(102426-102471)
scaffold0029 (81-110)||(102489-102518)
[»] scaffold0027 (3 HSPs)
scaffold0027 (225-405)||(141442-141624)
scaffold0027 (39-85)||(141771-141817)
scaffold0027 (82-110)||(141727-141755)
[»] scaffold0137 (2 HSPs)
scaffold0137 (229-359)||(8996-9126)
scaffold0137 (11-82)||(9278-9348)
[»] scaffold0010 (2 HSPs)
scaffold0010 (243-372)||(141021-141150)
scaffold0010 (3-77)||(140786-140860)
[»] scaffold0182 (1 HSPs)
scaffold0182 (30-88)||(23300-23358)
[»] scaffold0564 (2 HSPs)
scaffold0564 (23-77)||(4691-4745)
scaffold0564 (80-110)||(4774-4804)
[»] scaffold0016 (2 HSPs)
scaffold0016 (19-85)||(205887-205952)
scaffold0016 (12-89)||(205672-205748)
[»] scaffold0003 (1 HSPs)
scaffold0003 (225-281)||(421029-421085)


Alignment Details
Target: chr7 (Bit Score: 111; Significance: 7e-56; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 225 - 404
Target Start/End: Complemental strand, 37517891 - 37517710
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  37517891 aaagcaaaactcaaaactgctgaaatgtgagagagtctgattgctgattatacataagaattgtccagattataaaatccgaaatagtaaacatgaatcc 37517792  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaa 404  Q
    ||||||||||||||||||||||||| |||| ||||| || |||||||  || ||||| ||| | ||||||||| ||||||||    
T  37517791 ggattttaaaatccggaatgcacaagggcatttttagaaattttacagggcgcgggaaaaggctataggatggaaaaagtaa 37517710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 43737621 - 43737807
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  43737621 aaagcaaaactcaaaactgttgaaatgtgagagagtctaatggctgattatacataagaattgtccggattataaaatatgaaatagtaaacatgaatct 43737720  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacagcacgg--gagaagaccataggatgggaaaagtaattgtc 409  Q
    |||||||||||||||||||||||||||||| ||||  || ||||||||  ||   ||||||  |||||| |||||||||||||||||    
T  43737721 ggattttaaaatccggaatgcacaaaggcatttttggaaattttacagggcgcatgagaaggtcatagggtgggaaaagtaattgtc 43737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 229 - 405
Target Start/End: Original strand, 9152321 - 9152497
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    ||||||| |||| |||||||||||||||  |||||||   |||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||    
T  9152321 caaaacttaaaactgctgaaatgtgaga--gtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaattcggat 9152418  T
Q  329 tttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||| |||| |||| ||| |||||||  || |||||||||  |||||| ||| |||||||||    
T  9152419 tttaaaatccggaatgcacaagggcatttttgaaaattttacagcgcgcgggagaaggtcatagggtggaaaaagtaat 9152497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 19225226 - 19225102
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| |||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||     
T  19225226 aaagcaaaattcaaaactgctgaaatgtgggagagtctgatggctgattatacataagaattgtccagattataaaatccgaaatagtaaacataaatcc 19225127  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    ||||||||||||||||||| |||||    
T  19225126 ggattttaaaatccggaatacacaa 19225102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 36629736 - 36629860
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||| ||||||||   ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  36629736 aaagcaaaactcaaaactgctgaaatgtgagaaagtctgatgactgattatacataagaattgtccatattataaaatccgaaatagtaaacatgaatcc 36629835  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    |||||||||||||| ||||| ||||    
T  36629836 ggattttaaaatccagaatgtacaa 36629860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 225 - 391
Target Start/End: Original strand, 19818909 - 19819075
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || ||||||||||||  |||||||   |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  19818909 aaagcaaaactcaaaactgttgaaatgtgaga--gtctgatgcgtgattatacataagaattgtccggattataaaatccgaaataataaacatgaatct 19819006  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccatagg 391  Q
    |||||||||||||| |||||||||| | || |||| ||| |||||||  || ||||||||| |||||||    
T  19819007 ggattttaaaatccagaatgcacaaggacatttttgaaaattttacagggcgcgggagaaggccatagg 19819075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 225 - 347
Target Start/End: Complemental strand, 42925266 - 42925144
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||     
T  42925266 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatcc 42925167  T
Q  325 ggattttaaaatccggaatgcac 347  Q
    ||||||||||||||| |||||||    
T  42925166 ggattttaaaatccgaaatgcac 42925144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 24041818 - 24041684
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||  ||||||||||| ||||||||||||||||| ||     
T  24041818 aaagcaaaactcaaaactgataaaatgtgagagagtctgatggctgattatacataagaattgtcaggattataaaatccgaaatagtaaacatgattcc 24041719  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    | ||||||||||| ||||||||||| |||| ||||    
T  24041718 gaattttaaaatctggaatgcacaagggcattttt 24041684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 323
Target Start/End: Complemental strand, 36468177 - 36468079
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatc 323  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  36468177 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatc 36468079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 47203017 - 47203134
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  47203017 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 47203116  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  47203117 ggattatgaaatccggaa 47203134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 3936517 - 3936697
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| |||| | ||||||||  |||||||   |||||||||||||||||||||| |||||||||||   ||||||||||||||||||     
T  3936517 aaagtaaaactcaaaactgcttacatgtgaga--gtctgatggctgattatacataagaattgtccggattataaaatctaaaatagtaaacatgaatcc 3936614  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||||||| ||||| |||| |||| ||| |||||||  || ||| ||||| ||||||| |||||||||||||    
T  3936615 agattttaaaatccggaatacacaagggcatttttgaaaattttacagggcgcggaagaaggccatagggtgggaaaagtaat 3936697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 42864728 - 42864548
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| ||||||  |||||||||||||||  ||||||   ||| ||||| |||||||||||| ||||||||||| | ||||||||||||||||||     
T  42864728 aaagcaaaattcaaaacagctgaaatgtgagag--tctgatggctgaatatacttaagaattgtccggattataaaatccaaaatagtaaacatgaatcc 42864631  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||||| |  |||||||||||| || || | || ||||||||||    
T  42864630 ggattttaaaatccggaatgcacaagggcatttttgaaaattttagagggcacgggagaaggccttaaggtgagaaaagtaat 42864548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 8155428 - 8155545
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||| ||||||| ||||||||||| | ||||||||||||||| |||    
T  8155428 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataagtattgtccggattataaaatccaaaatagtaaacatgattct 8155527  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  8155528 ggattatgaaatccggaa 8155545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 31643577 - 31643694
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||| ||||||| ||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  31643577 aaagcaaaactcaaaactgctgaaatatgagagattctgatggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 31643676  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||| ||||||    
T  31643677 ggattatgaaagccggaa 31643694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 369
Target Start/End: Original strand, 36408886 - 36409029
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||||||| |||||||||||  |||||||||||||||||| ||| |||| ||||||  |||||||||||||| ||||     
T  36408886 aaagcaaaactcaaaactactgaaatgtgaaagagtctgataactgattatacataagaattatccggattgtaaaatctgaaatagtaaacat-aatcc 36408984  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaattttta 369  Q
    | |||||||||| || |||||||||||||| ||||| || |||||    
T  36408985 gaattttaaaattcgaaatgcacaaaggcatttttagaaatttta 36409029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42925499 - 42925414
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42925499 aaggaccatgactcccttagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 42925414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 9152091 - 9152173
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  9152091 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 9152173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 37518122 - 37518040
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37518122 aaggaccatgactcccatagaagagacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 37518040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 18951494 - 18951380
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| ||  ||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  18951494 aaagtaaaactcaaaactggagaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 18951395  T
Q  325 ggattttaaaatccg 339  Q
    ||||| | |||||||    
T  18951394 ggattatgaaatccg 18951380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 19225450 - 19225372
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19225450 atgactcccatagaaggaacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagatccatttttcat 19225372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 36468389 - 36468291
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||  |||||| |||||||  ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  36468389 gactccctttaaagggacttcttacgggactccgcccctcaagattcaaaatttcatcgtttagacccatttttcatattctcataaaaatacgaaaaa 36468291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 3304374 - 3304261
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||| ||||| ||||||| ||||||   |||||||||||||||||| ||| ||||||||||| ||||||| ||||||||| |||    
T  3304374 aaagcaaaactcaaaactgccgaaatatgagagattctgatggctgattatacataagaattatccggattataaaatccgaaataataaacatgattct 3304275  T
Q  325 ggattttaaaatcc 338  Q
    ||||| | ||||||    
T  3304274 ggattatgaaatcc 3304261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 231 - 359
Target Start/End: Complemental strand, 24689958 - 24689829
Alignment:
Q  231 aaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatctggatt 329  Q
    |||||||||| |  |||||| | ||||||| ||||   |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||    
T  24689958 aaactcaaaactattgaaatatcagagagtttgatggctgattatacataagaattgtccggattataaaattcgaaatagtgaaacatgaatacggatt 24689859  T
Q  330 ttaaaatccggaatgcacaaaggcaatttt 359  Q
    |||||||||| | | |||||||||| ||||    
T  24689858 ttaaaatccgaattacacaaaggcattttt 24689829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 47202787 - 47202872
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47202787 aaggaccatgactcccatagaagggacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 47202872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 31985369 - 31985291
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | |||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  31985369 atgactctcatagaagggatttcttacaggactctgcccctcaaactccaaaattcaatcgtttagacccatttttcat 31985291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43737382 - 43737467
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | |||||    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43737382 aaggaccatgactcccttagaaggaacttcttgtgggactccgcccctcaaaatctaaaattccatcgtttagacccatttttcat 43737467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 6467921 - 6467837
Alignment:
Q  235 tcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatg 319  Q
    |||||| ||||||||||||||||||||||||   |||||||||||||||||||| | ||||||||||| ||||| ||||||||||    
T  6467921 tcaaaactgctgaaatgtgagagagtctgatgactgattatacataagaattgttcggattataaaatccgaaaaagtaaacatg 6467837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 7115119 - 7115046
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  ||||||  |||||||||||||||||||||| ||||||||||||||||    
T  7115119 gactcccttagaagggacttcttacgggactccttccctcaaaatccaaaattccattgtttagacccattttt 7115046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19818680 - 19818764
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  |||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  19818680 aaggaccatgactcccgtagaagggacttcttacgggactccacccctcaaa-tccaaaattccatcgtttagacctatttttcat 19818764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 31643340 - 31643425
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | ||||||   |||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  31643340 aaggaccatgactcccttagaaggaacttcttatgggactccacccctcaaaatccaaaattccattatttagacccatttttcat 31643425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 24042034 - 24041971
Alignment:
Q  25 gggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24042034 gggacttcttacgggactccgcccctcaaaatccaaaactccatcgtttagacccatttttcat 24041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 33573889 - 33573822
Alignment:
Q  21 agaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||| |||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  33573889 agaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacccatttttcat 33573822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 42864961 - 42864878
Alignment:
Q  3 aaggactatgactcccttagaagg-gatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||| | || ||||||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  42864961 aaggaccatgactcccttagaaagagacttcttatgggactccgcccctcaaaatccaaaattcaatcgtttagacccattttt 42864878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 43186094 - 43186157
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttag 75  Q
    ||||||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||||||    
T  43186094 gactcccttagaagggacttcttacgggactccgcccctaaaaatccaaaattccatcgtttag 43186157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 48705846 - 48705775
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||| ||||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  48705846 tcccgtagaagggacttcttataggactccgcccctcaaattccaaaatttcatcgtttagacccatttttc 48705775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 3304610 - 3304528
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||  ||||||||| |||||||  |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  3304610 aaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaatttcattgtttagacctattttt 3304528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 8155206 - 8155280
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| || |||| | |||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  8155206 atgactcccgtacaaggaacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccatttt 8155280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 26554791 - 26554721
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagatt 295  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||| ||||||||||| ||||||| ||||    
T  26554791 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttggttatacataagcattgtccggatt 26554721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 36629503 - 36629585
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||  || |||||||||||||||||||||||||||| |||||||    
T  36629503 aaggaccatgactcccgtagaagggacttcttacgggactccatccttcaaaatccaaaattccatcgtttagactcattttt 36629585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 8214442 - 8214377
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc 79  Q
    ||||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  8214442 ctcccttagaagggacttcttacgagacttcgcccctcacaatccaaaattccatcttttagaccc 8214377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16278322 - 16278395
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  |||||||| | ||||||||||||||| |||||||||||||| |||||    
T  16278322 gactcccttagaagggacttcttacgggactccgcacatcaaaatccaaaatttcatcgtttagaccctttttt 16278395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 26554986 - 26554937
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26554986 gactctgcccctcaaaatccaaaattccatcgtttagacccatttttcat 26554937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 5731128 - 5731063
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  5731128 gactcccttagaagggacttcttacgagactccaccc-tcaaaatccaaaattccatcatttagacc 5731063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 28230315 - 28230266
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28230315 gactccacccctcaaaatctaaaattccatcgtttagacccatttttcat 28230266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6466960 - 6466914
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6466960 gactccgcccctcaaaatctaaaatttcatcgtttagacccattttt 6466914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 31985170 - 31985072
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaat 322  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||   |||||||||||||| || || | ||||||||||| |||| |||| ||||||||||    
T  31985170 aaagcaaaattcaaaactgctgaaatgtaagagattctgattgctgattatacataagcatagttcggattataaaatccgaattagtgaaacatgaat 31985072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 30861399 - 30861464
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||| |||||||| || ||| |||||| |||| ||||||| |||||||||||||||||||    
T  30861399 ttagaagggacttcttacaggattcctcccctcgaaattcaaaatttcatcgtttagacccatttt 30861464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 33573676 - 33573566
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||| |||| |||| ||||||||||||||||| ||||||    |  |||| ||||||||||| | ||||||||||| | ||||||||||||||| ||     
T  33573676 aaagcagaacttaaaactgctgaaatgtgagagattctgat----ggctatatataagaattgttcggattataaaatccaaaatagtaaacatgattcc 33573581  T
Q  325 ggattttaaaatccg 339  Q
    ||||| | |||||||    
T  33573580 ggattatgaaatccg 33573566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 32701110 - 32701034
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||| |||||||  | |||  |||||||||||  || |||||||| ||||||||||||||||||    
T  32701110 gactcccttagaagggacttcttacggggctcttcccctcaaaatttaacattccatcttttagacccatttttcat 32701034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 1519050 - 1519096
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||    
T  1519050 gactccgctcctcaaaatctaaaattccatcgtttagatccattttt 1519096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 28230115 - 28230054
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaatt 286  Q
    |||| ||||||||||| |||| |||||||||| ||||||||   ||||||||||||||||||    
T  28230115 aaagtaaaactcaaaactgctaaaatgtgagaaagtctgatgcatgattatacataagaatt 28230054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 30861603 - 30861660
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| | ||||||||||||||| ||||||  |||||||||||||||    
T  30861603 aaagcaaaattcaaaactcctgaaatgtgagagattctgattgttgattatacataag 30861660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 36408702 - 36408776
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||| ||||| ||       |||||||||||||||| ||||||||||||||    
T  36408702 tccgcccctcaaaatccaaaattccatcg-ttagatccattttaaatttttcatattctcaaaaaaatccgaaaaa 36408776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 47239561 - 47239492
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| |||||||  |||| |||| |||||||||||||||| |||||||||| ||  ||||||||    
T  47239561 ttagaagggacttcttacgggacttcgcctctcaaaatccaaaatttcatcgtttagtcctgtttttcat 47239492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 85
Target Start/End: Complemental strand, 37217540 - 37217509
Alignment:
Q  54 aatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||||||    
T  37217540 aatccaaaattccatcgtttagacccattttt 37217509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 1519109 - 1519139
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  1519109 atttttcatattctcagaaaaatccgaaaaa 1519139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 36629600 - 36629630
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  36629600 atttttcatattctcagaaaaatccgaaaaa 36629630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 43737476 - 43737506
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  43737476 atttttcatattctcagaaaaatccgaaaaa 43737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 19818774 - 19818803
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  19818774 tttttcatattctcagaaaaatccgaaaaa 19818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 33151502 - 33151555
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaat 56  Q
    |||||| ||||||||||||||||||| |||||||  |||||| ||| |||||||    
T  33151502 aaggaccatgactcccttagaagggacttcttacgggactccacccttcaaaat 33151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 24690174 - 24690122
Alignment:
Q  24 agggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||| |||||||| ||||   |||||||||||||||||||| ||||||||||    
T  24690174 agggacttcttacaggactttacccctcaaaatccaaaattcaatcgtttaga 24690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 42864863 - 42864835
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  42864863 atttttcatattctcagaaaaatccgaaa 42864835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 4e-54; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 4268243 - 4268096
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||     
T  4268243 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacataagaattgttcagattataaaatgcaaaatagtaaacatgaatcc 4268144  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  4268143 ggattttaaaatccggaatgcacaagggcatttttaaaaattttacag 4268096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 41510055 - 41509908
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||    
T  41510055 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatgaatgattatacataagaattgtccggattataaaatccgaaataataaacatgaatct 41509956  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||||||||||||||  ||||||||  || ||||||||    
T  41509955 ggattttaaaatccggaatgcacaagagcaattttggaaattttacag 41509908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 44465376 - 44465194
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  44465376 aaagcaaaactcaaaactgctgaaatgtgagagagtttgatggctgattatacataagaattgtccggattataaaattcgaaatagtaaacatgaatcc 44465277  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||||||||||||| |||| ||||  || ||||| ||  | ||||||||| ||||| | |||||||| ||||    
T  44465276 gaattttaaaatccggaatgcacaagggcatttttggaaattttaaaggtcgcgggagaaggccataaggtgggaaaactaat 44465194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 225 - 408
Target Start/End: Complemental strand, 32187506 - 32187321
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||||||||||   ||||||||||||||||||||||  ||||||||||   ||||||||||||||||||     
T  32187506 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggctgattatacataagaattgtccgaattataaaatctaaaatagtaaacatgaatcc 32187407  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaattgt 408  Q
    |||||||||||||||||||||||||  ||| |||| ||| |||||||  || |||||||||  |||||  ||||||||||||||||    
T  32187406 ggattttaaaatccggaatgcacaagagcatttttgaaaattttacagggcgcgggagaaggtcatagagtgggaaaagtaattgt 32187321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 245 - 405
Target Start/End: Complemental strand, 16750050 - 16749888
Alignment:
Q  245 tgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatg 344  Q
    |||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16750050 tgaaatgtgagaaagtctgatagctgattatacataagaattgtccggattataaaattcaaaatagtaaacatgaatccggattttaaaatccggaatg 16749951  T
Q  345 cacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    || ||  |||||||| ||| |||||||  || |||||||||  |||||| ||||||| |||||    
T  16749950 caaaatagcaattttgaaaattttacagggcgcgggagaaggtcatagggtgggaaaggtaat 16749888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 17474417 - 17474236
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||| ||||||||| | |||||||||||  |||||||||||||||||||     
T  17474417 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacacaagaattgttcggattataaaatctgaaatagtaaacatgaatcc 17474318  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||| | ||| |||| ||||  || |||||||  || ||||||||| ||||||| |||||||||||||    
T  17474317 ggattttaaaatccggaatacccaagggcatttttggaa-ttttacagggcgcgggagaaggccatagggtgggaaaagtaat 17474236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 33452084 - 33451937
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  33452084 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 33451985  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
      |||||||||||| ||||| |||| |||| ||||  || ||||||||    
T  33451984 aaattttaaaatccagaatgtacaagggcatttttggaaattttacag 33451937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 228 - 372
Target Start/End: Complemental strand, 45153524 - 45153380
Alignment:
Q  228 gcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctgga 327  Q
    ||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||| | ||||||||||| | |||||| ||||||||||| |||    
T  45153524 gcaaaactcaaaactactgaaatgtgagagagtctgatggctgattatacataagaattgttcggattataaaatccaaaatagcaaacatgaatccgga 45153425  T
Q  328 ttttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||    
T  45153424 ttttaaaatctggaatgcacaagggcatttttgaaaattttacag 45153380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 33452296 - 33452189
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||| || ||| || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33452296 aaggaccatgactcccataaaagcgacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 33452197  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  33452196 ccgaaaaa 33452189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 225 - 406
Target Start/End: Original strand, 8450827 - 8451010
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||   |||||||||| | ||||||||||||||||||     
T  8450827 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtctgaattataaaatccaaaatagtaaacatgaatcc 8450926  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaatt 406  Q
      |||||||||||| |||| ||||| |||| ||||  || ||||||||  | ||||||||||  ||||| ||| ||||||||||    
T  8450927 aaattttaaaatccagaatacacaagggcatttttggaaattttacaggacgcgggagaagattatagggtggtaaaagtaatt 8451010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 38308467 - 38308319
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||| ||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||     
T  38308467 aaagaaaaactcaaaactgctgaaatgtgagagagtttgatgactgattatacataagaattgtccggagtataaaatccgaaatagtgaaacatgaatt 38308368  T
Q  324 tggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||||| | | ||||| |||| |||| ||| ||||||||    
T  38308367 tggattttaaaatccgaattacacaagggcatttttgaaaattttacag 38308319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 369
Target Start/End: Complemental strand, 25217393 - 25217254
Alignment:
Q  230 aaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggatt 329  Q
    |||||| |||| ||||||||||||||||| ||||||   |||||| ||||||||||||| | ||||||||||| ||||||||||||||||||||  ||||    
T  25217393 aaaacttaaaactgctgaaatgtgagagaatctgatggctgattacacataagaattgttcggattataaaatccgaaatagtaaacatgaatccagatt 25217294  T
Q  330 ttaaaatccggaatgcacaaaggcaattttaaaattttta 369  Q
    ||||||||||||||||| || |||| |||| ||| |||||    
T  25217293 ttaaaatccggaatgcagaagggcatttttgaaaatttta 25217254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 36948748 - 36948644
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  36948748 aaagcaaaactcaaaactgttgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 36948649  T
Q  325 ggatt 329  Q
    |||||    
T  36948648 ggatt 36948644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 352
Target Start/End: Original strand, 39447690 - 39447806
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| || |||||||||||||| ||||||   |||||||||||||||||||| | ||||||||||| |||||||||||| ||||||| |||||||||||    
T  39447690 caaaactgttgaaatgtgagagactctgatgactgattatacataagaattgttcggattataaaatccgaaatagtaaatatgaatccggattttaaaa 39447789  T
Q  336 tccggaatgcacaaagg 352  Q
    |||| ||| ||||||||    
T  39447790 tccgaaatacacaaagg 39447806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 42894677 - 42894759
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  42894677 aaggaccatgactcccttagaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 42894759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 25217628 - 25217543
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25217628 aaggaccatgactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacccatttttcat 25217543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 44465594 - 44465509
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44465594 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcttttagacccatttttcat 44465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 397
Target Start/End: Complemental strand, 41854517 - 41854348
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||      ||   ||||||||||||||||||||||   ||||||||| ||||||||||||||||||||     
T  41854517 aaagcaaaactcaaaactgctgaaatgtgagagt-----atggctgattatacataagaattgtccgagttataaaatccgaaatagtaaacatgaatcc 41854423  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatggga 397  Q
      ||||||||||||  ||||||||| | || ||||  || |||||||  || |||||||||||||||||||||||    
T  41854422 aaattttaaaatccataatgcacaaggacatttttggaaattttacatggcgcgggagaagaccataggatggga 41854348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17474652 - 17474570
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||  | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  17474652 aaggaccatgactcccttagaagaaacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 17474570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 42894909 - 42894986
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||    
T  42894909 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaat 42894986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 359
Target Start/End: Complemental strand, 15994718 - 15994636
Alignment:
Q  277 cataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||||| |||||||||| | |||||||    
T  15994718 cataagaattgtccggattataaaatccaaaatagtaaacatgaatctgaattttaaaatccagaatgcacaaggacaatttt 15994636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 38308679 - 38308572
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaat 102  Q
    ||||||||||||||||||| || |||   |||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||| |||||||    
T  38308679 atgactcccttagaagggaatttttattggactccgcccctcaaaatccaaaattccattgtttagacccttttttgatttttcatattctccgaaaaat 38308580  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  38308579 ccgaaaaa 38308572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 27670803 - 27670881
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| ||  |||||   |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27670803 atgactcccttagaagagacctcttatgggactccgcccctcaaaattcaaaattccatcgtttagacccatttttcat 27670881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 34517410 - 34517488
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||||| |||||||  || ||||| ||||||||||||||||||||||||||||||| |||||||||    
T  34517410 atgactcccatagaagggacttcttacgggattccgcacctcaaaatccaaaattccatcgtttagaccaatttttcat 34517488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41854750 - 41854672
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || |||||||| | ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41854750 atgacaccattagaaggaacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 41854672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 38065200 - 38065123
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||  |||||| ||||    
T  38065200 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatagcagattatacataagaattgtctggattatgaaat 38065123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 17133034 - 17133110
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||| || || ||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17133034 gactcccttagaagagactttttacgggactccgaccctcaaaatccaaaatttcatcgtttagacccatttttcat 17133110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 39447474 - 39447542
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  39447474 tagaagggacttcttacgggactccgcccctcaaaatccaaaattacatcgtttagaccgatttttcat 39447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 11457264 - 11457358
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||| ||||||||| ||||||| |||||||| ||||||||||  |||||||||||||||||||| ||||||| || ||||| |||||| |||||||    
T  11457264 tcccatagaagggacttcttacgagactccgtccctcaaaatttaaaattccatcgtttagaccaatttttctta-tctcataaaaattcgaaaaa 11457358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 34 - 85
Target Start/End: Complemental strand, 16750267 - 16750216
Alignment:
Q  34 tacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16750267 tacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 16750216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 15994956 - 15994890
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    ||||| ||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15994956 tagaatggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttttc 15994890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 38065424 - 38065350
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||  |||||| || |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  38065424 atgactcctgtagaagagacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttt 38065350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 41203036 - 41202958
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | |||||| || | |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  41203036 atgactctcgtagaagagactccttacaggactccgcccatcaaaatccaaaatttcatcgtttagacccatttttcat 41202958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 5507757 - 5507805
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5507757 actccgcccctcaaaatccaaaattccatcgtttagactcatttttcat 5507805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 32187711 - 32187656
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32187711 ttcttacgggactccacccctcaaaatccaaaattccatcgtttagacccattttt 32187656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41510283 - 41510201
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||| ||||||||| | ||||||   |||||| ||||||||||||||||||| |||||||||||||| |||||    
T  41510283 aaggaccatgactctcttagaaggaacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagaccccttttt 41510201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 30763967 - 30764028
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    ||||||||| |||||||  |||||||||||||||||||||||||| |||||| |||||||||    
T  30763967 tagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtctagacccat 30764028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 41204267 - 41204320
Alignment:
Q  50 tcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatc 103  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  41204267 tcaaaatccaaaatttcatcgtttagactcatttttcatattctcataaaaatc 41204320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 25715770 - 25715835
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    |||||||||||||| |||||||||   |||||||||| |||||||||||||||||||| ||||||||    
T  25715770 gactcccttagaagagatttcttatgggactccgccc-tcaaaatccaaaattccatcatttagacc 25715835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 33440344 - 33440282
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||  ||||||||| |||||||| ||||||||||||||||||| ||||||||    
T  33440344 aagggacttcttacgggactccgcctctcaaaattcaaaattccatcgtttagatccattttt 33440282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 34517643 - 34517766
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||||||||||||||| ||||||||||||||||  ||| ||   |||||||||||||| ||||||| |||| || ||| |||| |||| ||||||||||     
T  34517643 aaagcaaaactcaaaactgctgaaatgtgagag--tctaatgactgattatacataagcattgtccggattttagaatccgaattagtgaaacatgaatt 34517740  T
Q  324 tggattttaaaatccggaatgcacaa 349  Q
     ||||| | ||||||| | |||||||    
T  34517741 cggattatgaaatccgaattgcacaa 34517766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 19109813 - 19109768
Alignment:
Q  65 ccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  19109813 ccatcgtttagacccatttttcatatttttagaaaaatccgaaaaa 19109768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 27671034 - 27671091
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||||||||||||||| ||||||||||||||||||||||||   ||||| ||||||||    
T  27671034 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatgactgattttacataag 27671091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 9847150 - 9847075
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||| || |||||||  |||||||| | |||||||||||||| ||||| ||||||||| ||||||||    
T  9847150 gactcccttagaagagacttcttacgggactccgctc-tcaaaatccaaaatcccatcatttagacccttttttcat 9847075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 35251269 - 35251313
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  35251269 actccgccccttaaaatccaaaatttcatcgtttagacccatttt 35251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 8388980 - 8389056
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||| ||| ||||||||||||||||||||||||||||||       ||||||||||| |||| ||||||||||||||    
T  8388980 ctccacccttcaaaatccaaaattccatcgtttagacccaatttttatttttcatatactcaaaaaaatccgaaaaa 8389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 36948851 - 36948805
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  36948851 gactccgcccttcaaaatcctaaattccattgtttagacccattttt 36948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 336
Target Start/End: Original strand, 8389180 - 8389281
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatctggattttaaa 334  Q
    ||||| ||||||||||||||||| | ||||   |||||||||||||  || || ||||||||||||| |||| |||| ||||||||||  | ||||||||    
T  8389180 caaaactgctgaaatgtgagagattatgattgctgattatacataaacatagttcagattataaaatccgaattagtgaaacatgaattcgaattttaaa 8389279  T
Q  335 at 336  Q
    ||    
T  8389280 at 8389281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 42604844 - 42604795
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| ||||||| ||||||||||||| ||||||||||||||| |||||||    
T  42604844 gacttcgccccttaaaatccaaaatttcatcgtttagacccacttttcat 42604795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 5507814 - 5507844
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  5507814 atttttcatattctcagaaaaatccgaaaaa 5507844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 27900437 - 27900387
Alignment:
Q  33 ttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    |||| ||||||| ||||||| ||||||||||||||||||||| ||| ||||    
T  27900437 ttacgagactcctcccctcataatccaaaattccatcgtttaaacctattt 27900387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 34517500 - 34517530
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  34517500 atttttcatattctcagaaaaatccgaaaaa 34517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 42894772 - 42894802
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  42894772 atttttcatattctcagaaaaatccgaaaaa 42894802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 9847358 - 9847286
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| ||||||||| || |||||||  ||||| |||| |||||||||||||||||||| |||| |||| |||||    
T  9847358 gacttccttagaagagacttcttacgggactctgccc-tcaaaatccaaaattccatcatttacaccctttttt 9847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 12885347 - 12885271
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||  | |||||||  ||||||||||||||||| |||||||| || | | |||||| |||||||||    
T  12885347 gactcccgtagaagaaacttcttacgcgactccgcccctcaaaacccaaaatttcaacatatagaccgatttttcat 12885271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 45293938 - 45294010
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||||||| |||||    |||| | ||||||||||||||||||| ||||||||| ||| |||||    
T  45293938 gactcccctagaagggacttcttgttggacttcacccctcaaaatccaaaatttcatcgtttaaaccaatttt 45294010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 4e-54; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 32817435 - 32817253
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  32817435 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 32817336  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||||||||||||| |||| |||| ||| |||||||  || ||||||||| | ||||| |||||||||||||    
T  32817335 agattttaaaatccggaatgcacaagggcatttttgaaaattttacagggcgcgggagaaggctatagggtgggaaaagtaat 32817253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 44572736 - 44572589
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||   |||||||||| ||||||||    
T  44572736 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatgtttgattatatataagaattgttcagattataaaatctaaaatagtaaatatgaatct 44572637  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
     |||||||||||||||||||||||| |||||||||  || ||||||||    
T  44572636 agattttaaaatccggaatgcacaagggcaattttggaaattttacag 44572589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 45046485 - 45046309
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| ||||||||||||||||  ||||||   ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||    
T  45046485 caaaactcaaaactgctgaaatgtgagag--tctgatggctgattatacataaaaattgtccggattataaaatttgaaatagtaaacatgaatctggat 45046388  T
Q  329 tttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||| ||||| ||||| |||| ||||  || |||||||  || |||||||||||| |||| |||||||||||||    
T  45046387 tttaaaatctggaatacacaagggcatttttggaaattttacagggcgcgggagaagaccgtagggtgggaaaagtaat 45046309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 34162417 - 34162235
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||| ||||||||||||||   ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||     
T  34162417 aaagcaaaactcaaaactgttaaaatttgagagagtctgatgactgattatacataataattgtccggattataaaatccgaaatagtaaacatgaatcc 34162318  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt--aaaatttttacagcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||||||| |||| ||||  |||| || ||  || |||||||||  |||||| |||||||||||||    
T  34162317 ggattttaaaatccggaatgcacaagggcatttttggaaaaattatagggcgcgggagaaggtcatagggtgggaaaagtaat 34162235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 40907554 - 40907411
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| ||||||||||||||||||||||||   ||||||||||||| |||||||| |||||||||||  ||||||||||||||||||| ||||    
T  40907554 caaaactcaaaattgctgaaatgtgagagagtctgatgactgattatacataaaaattgtccggattataaaatctgaaatagtaaacatgaatccggat 40907455  T
Q  329 tttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    ||||||||||||||||||||| | || |||| ||| ||||||||    
T  40907454 tttaaaatccggaatgcacaatgacatttttgaaaattttacag 40907411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 49677977 - 49678124
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  49677977 aaagcaaaactcaaaattgctgaaatgtgagagagtctgatggctgataatacataagaattgtccggattataaaatccgaaatagtaaacatgaatct 49678076  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    | ||||||||||||  ||||||||| |||| ||||  || ||||||||    
T  49678077 gaattttaaaatccaaaatgcacaagggcatttttggaaattttacag 49678124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 17000843 - 17000967
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  17000843 aaagaaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 17000942  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    |||||||||||||||||||||||||    
T  17000943 ggattttaaaatccggaatgcacaa 17000967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 40650333 - 40650152
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||     
T  40650333 aaagcaaaactcaaaattgctgaaatgtgagagagtctgattgctgattaaacataagaattgtctggattataaaatccgaaatagtaaacatgaatcc 40650234  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||| |||||||  ||||| |||   || |||||||  || |||||||||  |||||| |||||||||||||    
T  40650233 ggattttaaaatccgaaatgcac-caggcattttcggaaattttacatggcgcgggagaaggtcatagggtgggaaaagtaat 40650152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 45567530 - 45567384
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||| | |||||||||||||||||      
T  45567530 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattacacataagaattgtccggattataaaatccaaaatagtaaacatgaattc 45567431  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||||| |||||||||| || |||| ||| ||||||||    
T  45567430 ggattttaaaatccgg-atgcacaaagacatttttgaaaattttacag 45567384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 45046709 - 45046610
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  45046709 aaggaccatgactcccttagaagggacttcttatgagactccgcccctcaaaatccaaaattccatcgtttagatccattttttatattctcagaaaaat 45046610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 41584227 - 41584093
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||     
T  41584227 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataagaattgtccggattataaaatccgaaatagtaatcatgaatcc 41584128  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
     |||||||||| | ||||||||||| |||| ||||    
T  41584127 agattttaaaacctggaatgcacaagggcattttt 41584093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 242 - 405
Target Start/End: Original strand, 42546479 - 42546643
Alignment:
Q  242 tgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccgga 341  Q
    ||||||||||||||||||||||||   |||||||||||||||||||||  |||||| ||||  ||||||||||||||||||| ||||||||||||||| |    
T  42546479 tgctgaaatgtgagagagtctgatggctgattatacataagaattgtctggattat-aaatctgaaatagtaaacatgaatccggattttaaaatccgaa 42546577  T
Q  342 atgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||||| | || ||||  || ||||||||  | ||||||||| |||||||||| ||||||||||    
T  42546578 atgcacaaggacatttttggaaattttacaggacgcgggagaaggccataggatgagaaaagtaat 42546643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 52744484 - 52744387
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaat 322  Q
    |||||||||||||||| ||||||||||||| ||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52744484 aaagcaaaactcaaaactgctgaaatgtgaaagagtctgatggctgattatacataagaattgtccggattataaaattcgaaatagtaaacatgaat 52744387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 38885747 - 38885892
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||| |||| ||||||  | ||||   |||||||||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  38885747 aaagcaaaactcaaaactgcttaaatatgagag--tttgatgactgattatacataagaattgtccggattataaaaccccaaatagtaaacatgaatct 38885844  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||  |||||||||| | ||||||||||| ||||||||    
T  38885845 ggattttaaaatcgagaatgcacaaggacaattttaaaaattttacag 38885892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 7011789 - 7011892
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaattttaaaattttt 368  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||  || ||||    
T  7011789 tgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccgaaatgcacaagggcatttttggaaatttt 7011888  T
Q  369 acag 372  Q
    ||||    
T  7011889 acag 7011892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 23443263 - 23443377
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||| ||| ||||||||||||||||| | ||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||    
T  23443263 aaagcaaaactcgaaactgctgaaatgtgagagattgtgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattct 23443362  T
Q  325 ggattttaaaatccg 339  Q
    ||||| | |||||||    
T  23443363 ggattatgaaatccg 23443377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 359
Target Start/End: Original strand, 34006797 - 34006931
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| ||||||||||||||||||||||||   ||||||||||||| |||| ||| ||||||||||| ||||||||| ||  ||||||     
T  34006797 aaagtaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataaaaattatccggattataaaatccgaaatagtgaaactgaatcc 34006896  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    | ||||||||||||||| |||||||| ||| ||||    
T  34006897 gaattttaaaatccggattgcacaaatgcattttt 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 44937918 - 44937804
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||| | ||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  44937918 aaagcaaaactcaatactgctgaaatgtgagagattctgatgactgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 44937819  T
Q  325 ggattttaaaatccg 339  Q
    ||||| | |||||||    
T  44937818 ggattatgaaatccg 44937804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 32542744 - 32542861
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||| |||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||     
T  32542744 aaagcaaaactcaaaactgcttaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgattcc 32542843  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  32542844 ggattatgaaatccggaa 32542861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 49677783 - 49677870
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  49677783 aagggacttcttacgggactccgcccctcaaaattcaaaattccatcgtttagactcatttttcatattcttagaaaaatccgaaaaa 49677870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 667190 - 667303
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||| ||||||||||| | ||||||||||||||||||||||   | ||||||||||||||||||||  |||||||||| ||||||||| |||||||||||    
T  667190 aaagtaaaactcaaaactactgaaatgtgagagagtctgatggctaattatacataagaattgtccgaattataaaatccgaaatagtgaaacatgaatc 667289  T
Q  324 tggattttaaaatc 337  Q
     |||||||||||||    
T  667290 cggattttaaaatc 667303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 4615413 - 4615595
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||||||| ||   |||||||||| ||||||| ||| |||||||||||  |||||||||||||| ||||     
T  4615413 aaagcaaaactcaaaactgttgaaatgtgagagagtctaatggctgattatacacaagaattatccggattataaaatatgaaatagtaaacattaatcc 4615512  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacagca--cgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||  | ||||||   ||| |||| ||| |||||||  |  |||||||||||| ||| ||| ||||||||||    
T  4615513 agattttaaaatccaaactgcacacgagcatttttgaaaattttacaagatgcgggagaagaccgtagaatgagaaaagtaat 4615595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 42546268 - 42546352
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||| | |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42546268 aaggaccatgactcccttagaaggaacttcttacgggactccgccc-tcaaaatccaaaattccatcgtttagacccatttttcat 42546352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 41584423 - 41584332
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca-tattctcagaaaaatccgaaaaa 110  Q
    ||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||||||||||||| | || ||||||||||||||||||    
T  41584423 tagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacccatttttcatttttttcagaaaaatccgaaaaa 41584332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 383
Target Start/End: Complemental strand, 15069541 - 15069380
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaa-tc 323  Q
    |||||||||||||||| |  |||||||||| ||||||||||   | |||||||||||||||||||   |||||||||| |||||||||||||||||| ||    
T  15069541 aaagcaaaactcaaaactaatgaaatgtgacagagtctgattgcttattatacataagaattgtctgaattataaaatccgaaatagtaaacatgaattc 15069442  T
Q  324 tggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaag 383  Q
     |  ||||||||| |||||| ||||| |  | |||||||| |||||||  ||||||||||||    
T  15069441 agatttttaaaattcggaatacacaatgatatttttaaaaattttacagggcacgggagaag 15069380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 33611029 - 33610935
Alignment:
Q  226 aagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatga 320  Q
    ||||||||||||||| || |||||||||  ||| ||||||   ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  33611029 aagcaaaactcaaaactgttgaaatgtggaagattctgatggctgattatacataagaattgtccgaattataaaattcgaaatagtaaacatga 33610935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18583403 - 18583318
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| | ||||||| |||||| || |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18583403 aaggaccacgactcccatagaagagacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 18583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 28866481 - 28866404
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| | ||| |||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28866481 tgactcccttagaaggcacttcctacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttttcat 28866404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 49786812 - 49786929
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||| ||| ||| ||||||   ||| ||||||| |||||||||| ||||||||||| ||||||||||||||||| ||     
T  49786812 aaagcaaaattcaaaactgctgaaatatgaaagattctgatggctgactatacattagaattgtccggattataaaatccgaaatagtaaacatgattcc 49786911  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  49786912 ggattatgaaatccggaa 49786929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 6223381 - 6223255
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaa-tgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaat 322  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   ||||||| ||||||||||||||||||| |||||| |||| |||| ||||||||||    
T  6223381 aaagaaaaattcaaaactgctgaaaatgtgagagagtctgatggctgattatgcataagaattgtccagattttaaaatccgaattagtgaaacatgaat 6223282  T
Q  323 ctggattttaaaatccggaatgcacaa 349  Q
     |||||| | ||||||| | |||||||    
T  6223281 ttggattatgaaatccgaactgcacaa 6223255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 41584524 - 41584442
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  41584524 aaggaccatgactcccatagaagggacttcttacgggactccgcccctcacaatctaaaattccattgtttagacccattttt 41584442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 40650527 - 40650478
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40650527 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 40650478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49786568 - 49786653
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| |||||| || ||||||  ||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  49786568 aaggaccatgactcccgtagaagagacttcttatgagactccgcccctcaaaatccaaaattccattgttcaaacccatttttcat 49786653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 52744702 - 52744617
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | ||||||||| ||||||||||||||| || |||||||| ||||||| ||||||||||||| |||||||||    
T  52744702 aaggaccatgactctcatagaagggacttcttacaagactccacctctcaaaattcaaaatttcatcgtttagacctatttttcat 52744617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 9446038 - 9445967
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  9446038 gactcccttagaagggatttcttacgggactccgccc-tcaaaatccaaaatttcatcgtttagacccttttt 9445967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 27795147 - 27795215
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  27795147 tagaagagacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagacccgtttttcat 27795215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 6223604 - 6223530
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| || |||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  6223604 atgactcccttagaagagacttcttacg-gacaccgcccctcaaaatccaaaattccatcgtttagatccattttt 6223530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 18583173 - 18583090
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaa 308  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||||||| | ||||||||||| |||||    
T  18583173 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataagaattgttcggattataaaatccgaaa 18583090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 40907786 - 40907711
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| | || |||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  40907786 atgactctcataaaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 40907711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 38885532 - 38885598
Alignment:
Q  22 gaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||   |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38885532 gaagggacttcttatgggactccgcccctcaaaattcaaaattccatcgtttagacccatttttcat 38885598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 24472678 - 24472605
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||||||| ||||| |  |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24472678 gactcccatagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagacccattttt 24472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 24472457 - 24472342
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    ||||||||| | ||||  |||||||||||||||| |||||| | |||||||||||||| || || | ||||||||||| |||| |||| ||| ||||||     
T  24472457 aaagcaaaatttaaaacggctgaaatgtgagagattctgatttctgattatacataagcatagttcggattataaaatccgaattagtgaaaaatgaatt 24472358  T
Q  324 tggattttaaaatccg 339  Q
     |||||||||||||||    
T  24472357 cggattttaaaatccg 24472342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 800742 - 800677
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||||||| |||||||  ||||| |||| |||||||||||||||||||||||||||||    
T  800742 gactcccttagaagggacttcttacgggactctgccc-tcaaaatccaaaattccatcgtttagacc 800677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 34162590 - 34162532
Alignment:
Q  52 aaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  34162590 aaaatccaaaattcaatcgtgtagacccatttttcatattcttagaaaaatccaaaaaa 34162532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 28866228 - 28866175
Alignment:
Q  276 acataagaattgtccagattataaaattcgaaatagtaaacatgaatctggatt 329  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  28866228 acataagaattgtccggattataaaatccgaaatagtaaacatgaatccggatt 28866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 34006568 - 34006642
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||| ||||| |||||||| |||||    
T  34006568 atgactcccgtagaagggacttcttacgggactccgtccctcaaaatccaaaatttcatcg-ttagacccgttttt 34006642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 33611249 - 33611187
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||  |||| || |||||||||||||||||||||| ||||||||||||||||    
T  33611249 aagggacttcttacgggactacgtccctcaaaatccaaaattccattgtttagacccattttt 33611187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 17000670 - 17000719
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  17000670 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaat 17000719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23443038 - 23443123
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||| |||||| || ||||| || ||||| || |||||||||||||||||| || ||||| |||||||||||||    
T  23443038 aaggaccataactcccatagaagagacttcttgcacgactctgctcctcaaaatccaaaattctattgtttaaacccatttttcat 23443123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 42929208 - 42929266
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||| || ||| ||||||| |||||||||||||||||||  |||||||||    
T  42929208 ttcttacaagacttcgtcccccaaaatcaaaaattccatcgtttagacatatttttcat 42929266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 44572959 - 44572885
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| ||||||||| |||||| || ||||||   |||||||||| ||||||| |||||||| |||||||||||    
T  44572959 aaggaccatgactcccatagaagagacttcttaggggactccgcccatcaaaattcaaaattctatcgtttagac 44572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 8704360 - 8704295
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| |||||||  |||| | ||||||||||||||||||| |||||||| || ||||||||    
T  8704360 tagaagggacttcttacgggactacacccctcaaaatccaaaatttcatcgttttgatccattttt 8704295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 9445791 - 9445714
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    ||||||||| |||||| |||||||||| |||||| | ||||   |||||||||||||| || ||||||||||| ||||    
T  9445791 aaagcaaaattcaaaattgctgaaatgggagagattatgattgctgattatacataagcatagtccagattatgaaat 9445714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 43319134 - 43319062
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| ||||||||| || |||||||  |||||||||| |||||||||||||||||||| |||| |||| |||||    
T  43319134 gacttccttagaagagacttcttacgggactccgccc-tcaaaatccaaaattccatcatttacaccctttttt 43319062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 27795346 - 27795382
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgat 265  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27795346 caaaactcaaaactgctgaaatgtgagagagtctgat 27795382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 3561156 - 3561109
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||| ||||||| |||| |||||||| |||||||||    
T  3561156 ctccgcccctcaaaattcaaaatttcatcttttagacctatttttcat 3561109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 82
Target Start/End: Original strand, 38131221 - 38131264
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatt 82  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||    
T  38131221 gactctgcccctcaaaatccaaaactccatcgtttagactcatt 38131264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 44037191 - 44037246
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| |||| || |||||||||||| |||||||||||||||||| || |||||    
T  44037191 ttcttacgagacaccacccctcaaaatctaaaattccatcgtttagatcctttttt 44037246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6099764 - 6099718
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  6099764 gactctgcccctcaaaatccaaaatttaatcgtttagacctattttt 6099718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 6099944 - 6099898
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||  |||||||||||| ||||||    
T  6099944 gactctgcccctcaaaatccaaaatttaatcgtttagacctattttt 6099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 27400123 - 27400069
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgttta 74  Q
    ||||||| | |||||||| ||||||||||||||||||| ||||||  ||||||||    
T  27400123 tagaaggaacttcttacaggactccgcccctcaaaatcgaaaattttatcgttta 27400069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 38885603 - 38885633
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  38885603 atttttcatattctcagaaaaatccgaaaaa 38885633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 42546362 - 42546392
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  42546362 atttttcatattctcagaaaaatccgaaaaa 42546392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 45567673 - 45567643
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  45567673 atttttcatattctcagaaaaatccgaaaaa 45567643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 3561096 - 3561067
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  3561096 tttttcatattctcagaaaaatccgaaaaa 3561067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 44938114 - 44938073
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| ||||||| ||| |||||||||||||||||||    
T  44938114 ccctcaaaattcaaaatttcattgtttagacccatttttcat 44938073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Complemental strand, 52744603 - 52744574
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  52744603 tttttcatattctcagaaaaatccgaaaaa 52744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 11384349 - 11384305
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    ||||||||| || |||| ||||||||||||| |||||||||||||    
T  11384349 gactccgccactaaaaaaccaaaattccatcttttagacccattt 11384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 24472590 - 24472562
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  24472590 atttttcatattctcagaaaaatccgaaa 24472562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 40907697 - 40907669
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  40907697 atttttcatattctcagaaaaatccgaaa 40907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 42280528 - 42280346
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| | |||||||||||| |||||     
T  42280528 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccaaaatagtaaacaagaatcc 42280429  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||| ||||| |||| ||||  || |||||||  || ||||||||| |||||||||||||||||||||    
T  42280428 ggattttaaaatccggaatacacaagggcatttttggaaattttacagggcgcgggagaaggccataggatgggaaaagtaat 42280346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 40995190 - 40995372
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| |||||||||||||||  |||||||||| |||||||||||||||||||      
T  40995190 aaagcaaaactcaaaattgctgaaatgtgagagagtctgatggctgattacacataagaattgtccgaattataaaatccgaaatagtaaacatgaattc 40995289  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||| |||||||| || |||| |||| ||| ||||||||  | ||||||||| |||||||||||||||||||||    
T  40995290 ggattttaaaatcaggaatgcataagggcatttttgaaaattttacaggacgcgggagaaggccataggatgggaaaagtaat 40995372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 9074061 - 9074243
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  9074061 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 9074160  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||  ||||||||| | || |||| ||| ||||||||  | ||||||||| ||||| | |||||||||||||    
T  9074161 ggattttaaaatccaaaatgcacaaggacatttttgaaaattttacaggacgcgggagaaggccatatggtgggaaaagtaat 9074243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 225 - 369
Target Start/End: Complemental strand, 8885079 - 8884935
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  8885079 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 8884980  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaattttta 369  Q
    |||||||||||||| || ||||||| |||| |||| ||| |||||    
T  8884979 ggattttaaaatccagactgcacaagggcatttttgaaaatttta 8884935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 11697946 - 11697764
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||     
T  11697946 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaactgtccggattataaaatccgaaatagtaaacatgaatcc 11697847  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||||||||||| |||||||||| |||| || | |||  ||||||  || ||| ||||| |||| |||||| |||||||||    
T  11697846 ggattttaaaatccagaatgcacaagggcatttatgaaaaatttacagggcgcggaagaaggccatgggatggaaaaagtaat 11697764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 44106747 - 44106894
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||| ||||||||||| |||||||   |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  44106747 aaagcaaaactcaaaactgctaaaatgtgagagtgtctgatgactgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatct 44106846  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    ||||||||||||||||||| ||||| |||| ||||  || ||||||||    
T  44106847 ggattttaaaatccggaatacacaagggcatttttggaaattttacag 44106894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 406
Target Start/End: Complemental strand, 14163677 - 14163492
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||||||||||||||   | ||||||||||||||||||||  |||||||||||||||||||||||||||||||     
T  14163677 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatggctaattatacataagaattgtccgaattataaaattcgaaatagtaaacatgaatcc 14163578  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttac--agcacgggagaagacc--ataggatgggaaaagtaatt 406  Q
    |||||||||||||||||||| |||||| || ||||  || ||||||   ||||||||||||  |  ||||| ||||||||||||||    
T  14163577 ggattttaaaatccggaatggacaaagacattttttgaaattttacggggcacgggagaaggtcatatagggtgggaaaagtaatt 14163492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 27927579 - 27927397
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||||||||||||||||||   |||||||||||||||||||||  |||||||||||  |||||||||||||||||||     
T  27927579 aaagcaaaactcaaaacttctgaaatgtgagagagtctgattgctgattatacataagaattgtctggattataaaatctgaaatagtaaacatgaatcc 27927480  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||||||||||||| || | ||||  || |||||||  || || |||||| ||||||| |||||||||||||    
T  27927479 agattttaaaatccggaatgcacaagggtatttttggaaattttacagtgcgcgagagaaggccatagggtgggaaaagtaat 27927397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 28917311 - 28917497
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||| ||||||||||||||   ||||||||||||||||||||   ||||||||||| | |||||||||||||||||||    
T  28917311 aaagcaaaactcaaaactgctgaaatttgagagagtctgatgactgattatacataagaattgtttggattataaaatccaaaatagtaaacatgaatct 28917410  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaattgtc 409  Q
    | |||||||| ||||||||||||||| ||| |||| ||| |||||||  || ||| |||||  |||||| || ||||||||||||||    
T  28917411 gaattttaaattccggaatgcacaaatgcatttttgaaaattttacagggcgcggaagaaggtcatagggtgagaaaagtaattgtc 28917497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 11698602 - 11698784
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||| |||| ||||||||   |||||||||||||||| | ||| ||||||||||| ||||||||||||||||||||     
T  11698602 aaagcaaaactcaaaattgctgaaatgcgagatagtctgatggctgattatacataagaactatccggattataaaatccgaaatagtaaacatgaatcc 11698701  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | |||||||||||||||||| |||| |||| || | |||  ||||||  |||||| |||||||||||||  ||||||||||||    
T  11698702 gaattttaaaatccggaatgtacaagggcatttatgaaaactttacagggcacggaagaagaccataggtagggaaaagtaat 11698784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 236 - 405
Target Start/End: Original strand, 34853861 - 34854030
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| |||||||||||||||  |||||||   || ||||||||||||||||||| ||||||||||| | ||||||||||| |||||| |||||||||||    
T  34853861 caaaactgctgaaatgtgaga--gtctgatggctggttatacataagaattgtccggattataaaatccaaaatagtaaacgtgaatccggattttaaaa 34853958  T
Q  336 tccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | |||||||||||| |||| || | ||| |||||||  || ||||||||| ||||||| |||||||||||||    
T  34853959 ttcggaatgcacaagggcatttctgaaaattttacagggcgcgggagaaggccatagggtgggaaaagtaat 34854030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 330
Target Start/End: Original strand, 3095221 - 3095326
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  3095221 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 3095320  T
Q  325 ggattt 330  Q
    ||||||    
T  3095321 ggattt 3095326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 21594312 - 21594461
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||||||||||||||| ||||||||||||||||||| ||||   ||||||||| |||||||| | | ||||||||||| ||||||||| ||||||||||     
T  21594312 aaagcaaaactcaaaactgctgaaatgtgagagagtttgattgctgattatacgtaagaatttttcggattataaaatccgaaatagtgaaacatgaatt 21594411  T
Q  324 tggattttaaaatccggaatgcacaaaggcaattttaaaatttttacagc 373  Q
     ||||||||||||||| | ||||||| |||| |||| ||| |||||||||    
T  21594412 cggattttaaaatccgaattgcacaagggcatttttgaaaattttacagc 21594461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 405
Target Start/End: Original strand, 34854245 - 34854414
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| ||||||||||||||||  | ||||   |||||||||||||||||||||| ||||||||||| | |||||||||||||||||| | |||||||||    
T  34854245 caaaactgctgaaatgtgagag--tttgatgactgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatccgaattttaaaa 34854342  T
Q  336 tccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | |||||||||||| |||| || | ||| |||||||  || ||||||||| ||||||| | |||||||||||    
T  34854343 ttcggaatgcacaagggcatttctgaaaattttacagggcgcgggagaaggccatagggtaggaaaagtaat 34854414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 317
Target Start/End: Original strand, 21004849 - 21004941
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaaca 317  Q
    |||| ||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21004849 aaagtaaaactcaaaactgctgaaatgtgagagattctgatggttgattatacataagaattgtccggattataaaattcgaaatagtaaaca 21004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 8885311 - 8885226
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8885311 aaggaccatgactcccgtagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcatttagacccatttttcat 8885226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 42280750 - 42280668
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42280750 aaggaccataactcccctagaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 42280668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 11698175 - 11698093
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| |||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  11698175 aaggaccatgactcccatagaagggacgtcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 11698093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 31519515 - 31519398
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||| || |||   |||||||  |||||||||||||  |||||||||| ||||||||||||||||| ||     
T  31519515 aaagcaaaactcaaaactgctgaaatgtgagagattcagatggctgattatttataagaattgtccgaattataaaatccgaaatagtaaacatgattcc 31519416  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  31519415 ggattatgaaatccggaa 31519398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 7981825 - 7981897
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||| ||||||    
T  7981825 gactcccttagaagggatttgttataggacttcgcccctcaaaatccaaaattccatcgtttagactcatttt 7981897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 17119496 - 17119384
Alignment:
Q  228 gcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatag-taaacatgaatctgg 326  Q
    ||||||||||||| ||| ||||||||||||||||||||   |||||||||||| ||||||| |  |||||||||| ||||||||  ||||||||||  ||    
T  17119496 gcaaaactcaaaattgcagaaatgtgagagagtctgatggctgattatacatatgaattgttcgaattataaaatccgaaatagagaaacatgaattcgg 17119397  T
Q  327 attttaaaatccg 339  Q
    |||||||||||||    
T  17119396 attttaaaatccg 17119384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 28917075 - 28917158
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||| ||||||||||||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  28917075 aaggaccatgactcccttagaaggaacttcttatgggactccgcccctcaaaatccaaaattccattgtttagactcatttttc 28917158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 40994980 - 40995054
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  40994980 actcccgtagaagggatttattacgggactccgcctctcaaaatccaaaattccatcgtttagacacatttttca 40995054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 3094985 - 3095069
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||| ||| ||||| | |||||  |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  3094985 aaggaccatgactcccataggagggactacttacgcgactccacccctcaaaatccaaaatttcatcgtttagacccatttttca 3095069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 34853628 - 34853742
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctca 95  Q
    |||||| ||||||||||||||| ||| |||||    ||||||||||||||||||  |||||||||||||||||||||       ||||||||||||||||    
T  34853628 aaggaccatgactcccttagaaaggacttcttctgggactccgcccctcaaaataaaaaattccatcgtttagacccatttttaatttttcatattctca 34853727  T
Q  96 gaaaaatccgaaaaa 110  Q
    |||||||| ||||||    
T  34853728 gaaaaatctgaaaaa 34853742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 36980878 - 36980950
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||||||| |||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  36980878 gactcccctagaagggacttcttacaggactccgctcctcaaaattcaaaatcccatcgtttagacccatttt 36980950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31519751 - 31519668
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||| |||||||||||||  ||||||  ||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  31519751 aaggaccatgacacccttagaagggacgtcttacgggactcc--ccctcaaaatccaaaattccattgtttagacccatttttcat 31519668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 32504159 - 32504095
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatc 103  Q
    |||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||    
T  32504159 gactccacccctcaaaatccaaaatttcattgttgaaacccatttttcatattctcagaaaaatc 32504095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 31234672 - 31234598
Alignment:
Q  12 gactcccttagaagggatttcttacaag--actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| |||||||  |  ||||||||| |||||||||||||||||||||||||||||| |||||    
T  31234672 gactcccttagaagggacttcttacgcgggactccgccc-tcaaaatccaaaattccatcgtttagaccccttttt 31234598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 33472286 - 33472358
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||||||||||| || |||||||  |||| ||||||||||||| ||||||| |||||||||||||| ||||    
T  33472286 gactcccttagaagagacttcttacgggactacgcccctcaaaattcaaaatttcatcgtttagacccttttt 33472358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 4259514 - 4259459
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  4259514 ttcttacgggactccgcccctcaaaatccaaaattctatcctttagacccattttt 4259459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10840605 - 10840527
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||   |||||||  |||||| ||||||||||| |||||| ||||| ||||||||||||||||||    
T  10840605 atgactcccgtagaaggatattcttacgggactccacccctcaaaattcaaaatcccatcttttagacccatttttcat 10840527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 10833458 - 10833386
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||| || ||||| |||||||||  ||||||||||||||| ||||||||| |||| |||||    
T  10833458 gactcccttagaagggactttttacaggactccgcca-tcaaaatccaaaatttcatcgtttacaccctttttt 10833386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 24627789 - 24627861
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || ||||||||  ||||||||| |||||||||||||||| ||| ||||||||| |||||    
T  24627789 gactcccttagaagagacttcttacagaactccgccc-tcaaaatccaaaattctatcatttagaccctttttt 24627861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 24627998 - 24628070
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||||||||||| ||| ||||| ||| |||||    
T  24627998 gactcccttagaagagacttcttacgagactccg-ccctcaaaatccaaaattctatcatttaggccctttttt 24628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 36318105 - 36318181
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| ||||||||  || ||||||  ||||||| |||||||||||  ||||||||||||||||||| ||||||||||    
T  36318105 gactaccttagaaatgacttcttatgagactccacccctcaaaatttaaaattccatcgtttagactcatttttcat 36318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 27927782 - 27927727
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  27927782 ttcttacgggactccacccctccaaatccaaaatttcatcgtttagacccattttt 27927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 4259314 - 4259236
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaa-tgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    ||||||||| |||||| |||||||| ||||||| | ||||||  ||||||||||||||| || || |||||||||||||    
T  4259314 aaagcaaaattcaaaactgctgaaaatgtgagatattctgattgttgattatacataagcatagttcagattataaaat 4259236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 9073855 - 9073901
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  9073855 gactcagcccctcaaaatccaaaattctatcgtttagaaccattttt 9073901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 14163889 - 14163831
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  14163889 ttcttacgggactccgcccctcaaaataaaaaattccatcatttagacctatttttcat 14163831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 36407331 - 36407249
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaa 307  Q
    ||||||||| ||||||||||||||||| |||||| ||||||   |||||||||||||| ||  |   ||||||||||||||||    
T  36407331 aaagcaaaattcaaaaatgctgaaatgggagagattctgattgctgattatacataagcatatttaggattataaaattcgaa 36407249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 6395401 - 6395466
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||  ||| | ||||||||||||||||||||| ||| |||||||| ||||||    
T  6395401 tagaagagatttcttacgtgacgctgcccctcaaaatccaaaattcaatcatttagacctattttt 6395466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 10840371 - 10840314
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    |||| |||| |||||| ||||||||||||||||| ||||||  |||||||||||||||    
T  10840371 aaaggaaaattcaaaactgctgaaatgtgagagactctgattgttgattatacataag 10840314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 11698445 - 11698482
Alignment:
Q  51 caaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  11698445 caaaatcaaaaattccatcgtttagacccatttttcat 11698482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 17119696 - 17119655
Alignment:
Q  46 cccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    ||||||||||||||||||| |||||||||||||||| |||||    
T  17119696 cccctcaaaatccaaaatttcatcgtttagacccatctttca 17119655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 40328225 - 40328281
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||||  |||||||||||||||||||| ||||||||||||| || |||||||||||    
T  40328225 ttcttacgggactccgcccctcaaaatcc-aaattccatcgttaagtcccatttttca 40328281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 27234661 - 27234597
Alignment:
Q  24 agggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||| |||||||||  ||| |||||||| ||||||| |||| ||||||||||||||||||    
T  27234661 agggacttcctacaagactttgccactcaaaattcaaaatttcatcatttagacccatttttcat 27234597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 28219047 - 28219004
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  28219047 gcccctcaaaatccaaaattttatcgtttagacctatttttcat 28219004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 110
Target Start/End: Original strand, 44106611 - 44106642
Alignment:
Q  79 catttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||||    
T  44106611 catttttcatattctcagaaaaatccgaaaaa 44106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 40328437 - 40328475
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctg 263  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  40328437 aaagcaaaacttaaaactgctgaaatgtgagagagtctg 40328475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 41530891 - 41530963
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||| || |||||||  ||||||| |||||||||||||||||| |||  |||||| || |||||    
T  41530891 gactcccttagaagagacttcttacgggactccg-ccctcaaaatccaaaattgcattatttagatcctttttt 41530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 109
Target Start/End: Original strand, 3095085 - 3095113
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaa 109  Q
    |||||||||||||||||||||||||||||    
T  3095085 tttttcatattctcagaaaaatccgaaaa 3095113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 36980963 - 36980991
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  36980963 atttttcatattctcagaaaaatccgaaa 36980991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 1e-51; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 47739565 - 47739383
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| | |||||||| ||||||||      
T  47739565 aaagcaaaactcaaaactgctgaaatgtgagagagtctgattgctgattatacataagaattgtccggattataaaatccaaaatagtagacatgaattc 47739466  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttac--agcacgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||||||||||||| |||| |||| ||| ||||||  ||| ||||||||||||||||| |||||||||||||    
T  47739465 agattttaaaatccggaatgcacaagggcatttttgaaaattttacagagcgcgggagaagaccatagggtgggaaaagtaat 47739383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 33439706 - 33439890
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattata--cataagaattgtccagattataaaattcgaaatagtaaacatgaat 322  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||  |||| ||||||||||||||||||||| |||||||||||||||||||    
T  33439706 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatatacatatgaattgtccagattataaaatccgaaatagtaaacatgaat 33439805  T
Q  323 ctggattttaaaatccggaatgcacaaaggcaattttaaaatttttac--agcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||||||||||||||| |||| |||| ||| ||||||   || ||| ||||| ||||||| |||||||||||||    
T  33439806 ccggattttaaaatccggaatgcacaagggcatttttgaaaattttactaggcgcggaagaaggccatagggtgggaaaagtaat 33439890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 46622429 - 46622249
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||  ||||||   ||||||||||||||||||||||  |||||||||| ||||||||||||||||||||     
T  46622429 aaagcaaaactcaaaactgctgaaatgtgagag--tctgatggctgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatcc 46622332  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||||||  |||| |||| ||| |||||||  || ||||||||| ||||||| |||||||||||||    
T  46622331 ggattttaaaatccggaatgcacatgggcatttttgaaaattttacagggcgcgggagaaggccataggttgggaaaagtaat 46622249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 236 - 372
Target Start/End: Complemental strand, 3351678 - 3351542
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  3351678 caaaactgctgaattgtgagagagtctgatggttgattatacataagaattgtccagattataaaatccgaaatagtaaacatgaatccggattttaaaa 3351579  T
Q  336 tccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    ||| |||||||||| |||| ||||  || ||||||||    
T  3351578 tccagaatgcacaagggcatttttggaaattttacag 3351542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 229 - 405
Target Start/End: Complemental strand, 3902432 - 3902254
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| || | |||| ||||||||||||||   |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||    
T  3902432 caaaactcaaaactgttaaaatttgagagagtctgatggctgattatacataagaattgttcggattataaaatccgaaatagtaaacatgaatctggat 3902333  T
Q  329 tttaaaatccggaatgcacaaaggcaatttt--aaaatttttacagcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||| |||| ||||  |||| ||  |  || ||||||||| ||||||| |||||||||||||    
T  3902332 tttaaaatccggaatgcacaagggcattttttgaaaaattacagggcgcgggagaaggccatagggtgggaaaagtaat 3902254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 404
Target Start/End: Original strand, 35142610 - 35142789
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| |||||||||||||||  |||||||   ||||||| ||||||||||||||  |||||||||| ||||||||||||||||||| |    
T  35142610 aaagcaaaattcaaaactgctgaaatgtgaga--gtctgatggctgattatgcataagaattgtccgaattataaaatccgaaatagtaaacatgaatat 35142707  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaa 404  Q
    ||||||||||||| ||||||||||| | ||||||| ||| |||||||  || ||||||||| ||||||| ||||||||||||    
T  35142708 ggattttaaaatcaggaatgcacaaggacaattttgaaaattttacagggcgcgggagaaggccatagggtgggaaaagtaa 35142789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 408
Target Start/End: Original strand, 39150312 - 39150495
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||||||  |||||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||     
T  39150312 aaagcaaaactcaaaactgctgaaatgtgaaggagtctgatggatgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatcc 39150411  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttac--agcacgggagaagaccataggatgggaaaagtaattgt 408  Q
    |||||||||||| |||||||||| |  |||||||| ||| ||||||  |||||  |||||| | ||||||||| ||||||||||||    
T  39150412 ggattttaaaattcggaatgcacga--gcaattttgaaaattttacagagcacaagagaaggctataggatggaaaaagtaattgt 39150495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 50716781 - 50716963
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||||| |||| || | |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |     
T  50716781 aaagcaaaacttaaaactgttaaaatgtgagagagtctgatggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaagcc 50716880  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||  ||||||||| |||| |||| |||   |||||  || ||||||||| ||||||| ||| |||||||||    
T  50716881 ggattttaaaatccaaaatgcacaagggcatttttgaaaaaattacagggcgcgggagaaggccatagggtggaaaaagtaat 50716963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 50796066 - 50795884
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||||| |||| || | |||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |     
T  50796066 aaagcaaaacttaaaactgttaaaatgtgagagagtctgatggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaagcc 50795967  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||  ||||||||| |||| |||| |||   |||||  || ||||||||| ||||||| ||| |||||||||    
T  50795966 ggattttaaaatccaaaatgcacaagggcatttttgaaaaaattacagggcgcgggagaaggccatagggtggaaaaagtaat 50795884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 49095838 - 49095657
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||| |||||||||||  ||||| |||||||||||||     
T  49095838 aaagcaaaactcaaaactgcttaaatgtgagagagtctgatgactgattatacataagaattgtccggattataaaatctgaaatggtaaacatgaatcc 49095739  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||| | | || |||| |||| ||||  || |||||||  |  ||||||||| ||||||| |||||||||||||    
T  49095738 ggattttaaaatctgaactg-acaagggcatttttggaaattttacagggtgcgggagaaggccatagggtgggaaaagtaat 49095657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 2358242 - 2358125
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  2358242 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 2358143  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  2358142 ggattatgaaatccggaa 2358125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 38977374 - 38977244
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||| || || ||  |||  ||||||||||||||||||||||| ||||||||||| | ||||| ||||||||||||     
T  38977374 aaagcaaaactcaaaactgctgaaatgcgaaagtgt--gatggttgattatacataagaattgtccggattataaaatccaaaatattaaacatgaatcc 38977277  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatt 357  Q
    ||||||||||||||||||||||||| |||||||    
T  38977276 ggattttaaaatccggaatgcacaagggcaatt 38977244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 41301434 - 41301558
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||| ||||||||||||||||   |||||||||||||||||||||| |||||||||||  |||||||||||||||||||     
T  41301434 aaagcaaaactcaaaactgttgaattgtgagagagtctgatggatgattatacataagaattgtccggattataaaatctgaaatagtaaacatgaatcc 41301533  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    | ||||||||||  |||||||||||    
T  41301534 gaattttaaaatttggaatgcacaa 41301558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 500807 - 500693
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||||| |||| || | |||||||| ||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||     
T  500807 aaagcaaaacttaaaactgttaaaatgtgatagagtctgatggctgattatacataagaattgtccagattataaaatccgaaatagtaaacatcaatcc 500708  T
Q  325 ggattttaaaatccg 339  Q
    |||||||||||||||    
T  500707 ggattttaaaatccg 500693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 26053366 - 26053262
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||| ||||||||||   |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  26053366 aaagcaaaactcaaaactgttgaaatgtgatagagtctgatgactgattataaataagaattgtccggattataaaattcgaaatagtaaacatgaatcc 26053267  T
Q  325 ggatt 329  Q
    |||||    
T  26053266 ggatt 26053262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 225 - 372
Target Start/End: Original strand, 47130871 - 47131018
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| |||||||||||||| ||||| ||    |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||     
T  47130871 aaagaaaaactcaaaactgctgaaatgtgagggagtccgaagactgattatacataagaattgtctggattataaaatccgaaatagtaaacatgaatcc 47130970  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||| || ||| ||||| |||| |||| |||  |||||||    
T  47130971 ggattttaaaattcgaaattcacaagggcatttttgaaaactttacag 47131018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 269 - 359
Target Start/End: Original strand, 52777792 - 52777882
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  52777792 tgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatctggattttaaaatccggactgcacaagggcattttt 52777882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 39150146 - 39150209
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39150146 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 39150209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 46622654 - 46622547
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| || |||||| |||||   |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46622654 aaggaccatcactcccatagaatcaatttcttacgggactccgcccctcagaatccaaaattccatcgtttagacccatttttcatattcttagaaaaat 46622555  T
Q  103 ccgaaaaa 110  Q
    | ||||||    
T  46622554 ctgaaaaa 46622547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 3938728 - 3938834
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| ||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||| | |||    
T  3938728 caaaactgctgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattccggattatgaaa 3938827  T
Q  336 tccggaa 342  Q
    |||||||    
T  3938828 tccggaa 3938834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 8657655 - 8657772
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| ||||||||||||||||| ||||||   ||||||||||| |||||||||| ||||||||||| | ||||||||||||||| ||     
T  8657655 aaagtaaaactcaaaactgctgaaatgtgagagattctgatggctgattatacatgagaattgtccggattataaaatccaaaatagtaaacatgattcc 8657754  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  8657755 ggattatgaaatccggaa 8657772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3902665 - 3902551
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-------atttttcatattctca 95  Q
    |||||| ||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||| |||||||||| ||       ||||||||||||||||    
T  3902665 aaggaccatgacacccttagaaggaatttcttacgggactccgcccctcaaaatccaaaattcaatcgtttagatccatttttaatttttcatattctca 3902566  T
Q  96 gaaaaatccgaaaaa 110  Q
    |||||||||||||||    
T  3902565 gaaaaatccgaaaaa 3902551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 34821202 - 34821117
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | ||||||||| |||||||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  34821202 aaggaccatgactctcatagaagggacttcttacgggagtccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 34821117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 35142373 - 35142458
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  35142373 aaggaccatgactcccgtagaagggacttcttacggggctccgcccctaaaaatccaaaattccatcgtttagacccatttttcat 35142458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 54588326 - 54588226
Alignment:
Q  272 ttatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca 371  Q
    ||||||||||||||| ||  ||||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||  ||| |||||||| |||||||    
T  54588326 ttatacataagaattttctggattataaaatccgaaatagtaaacatgaatccggattttaaaatccaaaatgcacaatagcatttttaaaaattttaca 54588227  T
Q  372 g 372  Q
    |    
T  54588226 g 54588226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 47302534 - 47302629
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatga 320  Q
    |||||||||||||||| || |||||| ||||||| || |||   |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  47302534 aaagcaaaactcaaaactgttgaaatatgagagattccgatgactgattatatataagaattgtccggattataaaattcgaaatagtaaacatga 47302629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28873313 - 28873391
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||| || |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28873313 atgactcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagatccatttttcat 28873391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 329
Target Start/End: Complemental strand, 41485921 - 41485818
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||||||||||||||| ||||||||||||||||  ||||||  ||||||||| ||||||||||||| ||||||||||| |||||| || |||||||||||    
T  41485921 aaagcaaaactcaaaactgctgaaatgtgagag--tctgatggttgattatatataagaattgtccggattataaaatccgaaattgtgaaacatgaatc 41485824  T
Q  324 tggatt 329  Q
     |||||    
T  41485823 cggatt 41485818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 47302326 - 47302404
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||||| |||||||  ||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  47302326 atgactcccatagaagggacttcttacgggactctgcccctcaaaatccaaaattccattgtttagacccatttttcat 47302404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 51258711 - 51258785
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| ||||||||| |||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  51258711 atgactcccgtagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacccatttt 51258785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2358481 - 2358396
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| |||||||  |||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  2358481 aaggaccatgactcccctagaagggacttcttacgggactacgcccctcaaaatctaaaattccattgtttagacccatttttcat 2358396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 3938482 - 3938565
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||| |||||||||||| |||| | ||||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||    
T  3938482 aaggaccatgactcccttataaggaacttcttacaagactccgcccctcaaaatcttaaatttcattgtttagacccatttttc 3938565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 4394279 - 4394364
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||| | || ||||  || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  4394279 aaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagacccttttttcat 4394364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 29048639 - 29048711
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| ||||| ||| || ||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  29048639 gactcccgtagaaaggacttattacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttt 29048711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 501034 - 500963
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||| |||||||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  501034 ctcccatagaagggacttcttacggcactccgcccctcaaaatccaaaattccatcgtttagaccaattttt 500963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 51540486 - 51540404
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||||| |||| |   || || |||||||||||||||||| ||||||||||||||||||||||    
T  51540486 aaggaccatgactcccttagaagggacttctcatgggattctgcccctcaaaatccaaaactccatcgtttagacccattttt 51540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 51816531 - 51816621
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||| ||| |||||||  ||||| |||||||||||| |||| || ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  51816531 tagaatggacttcttacgggactctgcccctcaaaattcaaattttcatcgtttagatccatttttcatgttctaagaaaaatccgaaaaa 51816621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 45244606 - 45244678
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  45244606 gactcccttagaaaggacttcttacgagactccgccc-tcaaaatccaaaattccatcatttagaccctttttt 45244678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 50716553 - 50716638
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  |||||| || |||||||  || |||||||||||||||||||||||||||| |||||||| |||||||||    
T  50716553 aaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagacctatttttcat 50716638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 50796294 - 50796209
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  |||||| || |||||||  || |||||||||||||||||||||||||||| |||||||| |||||||||    
T  50796294 aaggaccatgactcctctagaagagacttcttacgggattccgcccctcaaaatccaaaattccatcctttagacctatttttcat 50796209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 14828758 - 14828690
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  14828758 tagaagagacttcttacaggactccgcctttcaaaatccaaaattccatcgtttagacctatttttcat 14828690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 35345751 - 35345683
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||| ||  ||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  35345751 tagaagggacttctaacgggactccgcccctcaaaatccaaaattccaccgtttaaacccatttttcat 35345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 3351923 - 3351852
Alignment:
Q  5 ggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    |||| ||||||||| ||||||||| ||||||   ||||||||||||||||||| ||||||||||||||||||    
T  3351923 ggacaatgactcccgtagaagggacttcttatgggactccgcccctcaaaatctaaaattccatcgtttaga 3351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 33439494 - 33439569
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| || |||||| || ||||   |||||||||| |||||||||||||||||||||||||||||||||||    
T  33439494 atgactcccataaaagggacttgttacggaactccgccccacaaaatccaaaattccatcgtttagacccattttt 33439569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Original strand, 21481395 - 21481453
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccg 105  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  21481395 cccttaaaatccaaaattccattgtttagaccaatttttcatattctctgaaaaatccg 21481453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 43471524 - 43471466
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||| | ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  43471524 tagaaggaacttcttacaagactccacccctcaaaatccaaaatttcatcgtttagacc 43471466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43472827 - 43472762
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccat 68  Q
    |||||| ||||||||  ||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  43472827 aaggaccatgactcctctagaagggacttcttacgggactccgcccctcaaaatccaaaattccat 43472762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 30721655 - 30721611
Alignment:
Q  41 ctccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  30721655 ctccgcccctcaaaatccaaaatttcatcgtttagacccattttt 30721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 34009936 - 34009868
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||  ||||||||||| ||||||||||||||||||| |||| || ||||||||||    
T  34009936 tagaagggacttcttacgtgactccgccccccaaaatccaaaattccatcatttatactcatttttcat 34009868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 51540256 - 51540200
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||    
T  51540256 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataa 51540200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 38977599 - 38977521
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcg-tttagacccatttttcat 88  Q
    |||||||| ||||||||| |||||    |||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  38977599 tgactcccgtagaagggacttcttgtgggactccgcccctcaaaatccaaaatttcatcgttttaaacccatttttcat 38977521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 41300937 - 41300995
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  41300937 ttcttacgggactccgcccatcaaaatcaaaaattccatcgtttagacctatttttcat 41300995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 49096040 - 49095995
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  49096040 gactccgtccctcaaaatccaaaattccatcgttaagacccatttt 49095995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 39 - 110
Target Start/End: Complemental strand, 47739756 - 47739679
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt-------catattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||       |||||||||||||||||||||||||    
T  47739756 gactccgcccctcaaaattcaaaattccgt-gtttagacccatttttaatttttcatattctcagaaaaatccgaaaaa 47739679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 370
Target Start/End: Original strand, 4394555 - 4394609
Alignment:
Q  316 catgaatctggattttaaaatccggaatgcacaaaggcaattttaaaatttttac 370  Q
    |||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  4394555 catgaatccggattttaaaatccggaatgcacaagggcatttttgaaaattttac 4394609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 29036140 - 29036186
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  29036140 gactctgcccctcaaaatctaaaatttcatcgtttagacccattttt 29036186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 51493330 - 51493428
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaat 322  Q
    ||||||||| |||||| |||| ||||||||||||  |||||   |||||||||||||| || || | ||||||||||| |||| |||| ||||||||||    
T  51493330 aaagcaaaattcaaaactgctaaaatgtgagagatcctgattgatgattatacataagcatagttcggattataaaatccgaattagtgaaacatgaat 51493428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 28873537 - 28873614
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    |||||||||||||||| || | |||||||||||||||||||    || ||||||||| |||||||| |||| ||||||    
T  28873537 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgaccgactatacataaaaattgtccggattttaaaat 28873614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 43419942 - 43419905
Alignment:
Q  49 ctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    |||||||||||||||||||||||||| |||||||||||    
T  43419942 ctcaaaatccaaaattccatcgtttatacccatttttc 43419905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 47123328 - 47123369
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  47123328 ccctcaaaatccaaaatttcatcgttttgacccatttttcat 47123369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 47130694 - 47130735
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  47130694 ccctcaaaatccaaaatttcatcgttttgacccatttttcat 47130735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 4300125 - 4300054
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||| |||||||| |||||| ||| ||||||||||||||| |||||||| ||| |||||||    
T  4300125 actcccatataagggacttcttacaggactccaccc-tcaaaatccaaaatttcatcgtttggacgcattttt 4300054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 11266573 - 11266617
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||    
T  11266573 actccgtccctcaaaatctaaaattccatcgtttagatccatttt 11266617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 47769603 - 47769647
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||| ||| ||||| |||||||||||||    
T  47769603 cgcccctcaaaatccaaaatttcattgtttaaacccatttttcat 47769647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 41486101 - 41486058
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| || ||||||||||||||||||| |||||||||||    
T  41486101 gcccctcaatattcaaaattccatcgtttagatccatttttcat 41486058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 3351825 - 3351795
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  3351825 atttttcatattctcagaaaaatccgaaaaa 3351795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 8657511 - 8657541
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  8657511 atttttcatattctcagaaaaatccgaaaaa 8657541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 19419734 - 19419800
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| || |||||| | || ||||||||||||||||||||| ||| |||||||| ||| |||||    
T  19419734 ttagaagagacttcttataggattccgcccctcaaaatccaaaactccttcgtttaggcccgttttt 19419800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 35142467 - 35142497
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  35142467 atttttcatattctcagaaaaatccgaaaaa 35142497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47123378 - 47123408
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47123378 atttttcatattctcagaaaaatccgaaaaa 47123408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47130744 - 47130774
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47130744 atttttcatattctcagaaaaatccgaaaaa 47130774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 49095982 - 49095952
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  49095982 atttttcatattctcagaaaaatccgaaaaa 49095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 50716647 - 50716677
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  50716647 atttttcatattctcagaaaaatccgaaaaa 50716677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 50796200 - 50796170
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  50796200 atttttcatattctcagaaaaatccgaaaaa 50796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 51258799 - 51258829
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  51258799 atttttcatattctcagaaaaatccgaaaaa 51258829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 109
Target Start/End: Complemental strand, 35345674 - 35345645
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaa 109  Q
    ||||||||||||||||||||||||||||||    
T  35345674 atttttcatattctcagaaaaatccgaaaa 35345645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 45711935 - 45711886
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaa 61  Q
    ||||| ||||||||||| |||||||  |||||| ||||||||||||||||    
T  45711935 gactctcttagaagggacttcttacgggactccacccctcaaaatccaaa 45711886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 8735402 - 8735476
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||||| | ||||||  ||||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  8735402 gactaccttagaaggaacttcttaggagactccgccc-tcaaaatccaaaatttcat-atttagacccttttttcat 8735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 9087643 - 9087717
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||| |||||||||| | ||||||  ||||||||||| ||||||||||||||| |||  ||||||||| ||||||||    
T  9087643 gactaccttagaaggaacttcttaggagactccgccc-tcaaaatccaaaatttcat-atttagacccttttttcat 9087717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 14828547 - 14828491
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| |||||||||| |||||| ||||||   |||||||||||||    
T  14828547 aaagcaaaattcaaaactgctgaaatgggagagattctgattgctgattatacataa 14828491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-49; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 7423440 - 7423622
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  7423440 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggttgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 7423539  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||||||||||| |  ||| |||| ||| ||||| |  || ||||||||||||||||  ||| |||||||||    
T  7423540 ggattttaaaatccggaatgcactagagcatttttgaaaattttatagggcgcgggagaagaccatagagtggaaaaagtaat 7423622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 2539983 - 2540167
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattataca--taagaattgtccagattataaaattcgaaatagtaaacatgaat 322  Q
    |||||||||||||||| ||||||||||||||||||| | ||   ||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||    
T  2539983 aaagcaaaactcaaaactgctgaaatgtgagagagtgtaatggatgattatacacataagaattgtccggattataaaatccgaaatagtaaacatgaat 2540082  T
Q  323 ctggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||||||||||||||||| || |||| ||| |||||||  || ||||||||| ||||||| |||||||||||||    
T  2540083 ccggattttaaaatccggaatgcacaaagacatttttgaaaattttacagggcgcgggagaaggccatagggtgggaaaagtaat 2540167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 229 - 351
Target Start/End: Original strand, 17264955 - 17265077
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  17264955 caaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatattaaacatgaatctggat 17265054  T
Q  329 tttaaaatccggaatgcacaaag 351  Q
    |||||||||||||||||||||||    
T  17265055 tttaaaatccggaatgcacaaag 17265077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 229 - 359
Target Start/End: Complemental strand, 4507926 - 4507798
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| ||||||||||||||||  ||||||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  4507926 caaaactcaaaattgctgaaatgtgagag--tctgatggctgattatacataagaattgtccggattataaaattcgaaatagtaaacatgaatccggat 4507829  T
Q  329 tttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||| ||||| |||| ||||    
T  4507828 tttaaaatccggaatacacaagggcattttt 4507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 7416315 - 7416497
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||| ||||   ||||||||||||| |||||||| |||||||||||  |||||||||||||||||||     
T  7416315 aaagcaaaactcaaaactgctgaaatgtgagagagtatgatggctgattatacataaaaattgtccggattataaaatctgaaatagtaaacatgaatcc 7416414  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    |||| |||| ||||||||| ||||| | || |||| ||| ||||| ||  | ||||||||||||||| | ||| |||||||||    
T  7416415 ggatattaacatccggaatacacaaggacatttttgaaaattttataggacgcgggagaagaccataaggtggaaaaagtaat 7416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 21514880 - 21514791
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21514880 actcccttagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 21514791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 13096696 - 13096820
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||||  |||||||||||||||||||     
T  13096696 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattatccggattataaaatctgaaatagtaaacatgaatcc 13096795  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    |||||||||||| || | |||||||    
T  13096796 ggattttaaaattcgaactgcacaa 13096820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 247 - 359
Target Start/End: Complemental strand, 2812844 - 2812732
Alignment:
Q  247 aaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgca 346  Q
    |||||||||||||||||||   |||||||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  2812844 aaatgtgagagagtctgatgactgattatacataagaattgtccggataataaaatccgtaatagtaaacatgaatctggattttaaaatccgaaatgca 2812745  T
Q  347 caaaggcaatttt 359  Q
    ||| |||| ||||    
T  2812744 caagggcattttt 2812732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 3716921 - 3716797
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||| ||||||||||   ||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  3716921 aaagcaaaactcaaaattgttaaaatgtgaaagagtctgatggctgattatacataagaattgtccgaattataaaattcgaaataataaacatgaatct 3716822  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    | |||||| |||| |||||| ||||    
T  3716821 gaattttacaatcaggaatgtacaa 3716797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 339
Target Start/End: Original strand, 5639633 - 5639746
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||| |||||||||||||||||||   ||||||||||||| ||||||||  |||||||||| ||||||||||||| ||||||     
T  5639633 aaagcaaaactcaaaactgctcaaatgtgagagagtctgatggctgattatacataaaaattgtccgaattataaaatccgaaatagtaaacgtgaatc- 5639731  T
Q  325 ggattttaaaatccg 339  Q
    |||||||||||||||    
T  5639732 ggattttaaaatccg 5639746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 362
Target Start/End: Original strand, 9905593 - 9905731
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    |||||||||||||||| ||||||||||||| ||||||||||   |||||||||||||||||||| | |||||||||||   ||||||| |||||||||||    
T  9905593 aaagcaaaactcaaaactgctgaaatgtgaaagagtctgatggctgattatacataagaattgttcggattataaaatcgaaaatagtgaaacatgaatc 9905692  T
Q  324 tggattttaaaatccggaatgcacaaaggcaattttaaa 362  Q
     |||||||||||||| || ||||| | |||| |||||||    
T  9905693 cggattttaaaatccagattgcaccagggcatttttaaa 9905731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 14587187 - 14587006
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||| ||||||||||   |||||||| ||||||||| |||  |||||||||| |||||   ||||||||||||     
T  14587187 aaagcaaaattcaaaactgctgaaatgtgaaagagtctgatggctgattata-ataagaattttccgaattataaaatccgaaaatctaaacatgaatcc 14587089  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||||||||||||||||||| || | || ||||| || ||||||||  | ||||||||| ||||||  | |||||||||||    
T  14587088 ggattttaaaatccggaatgcataaggtcatttttagaaattttacaggacgcgggagaaggccatagagttggaaaagtaat 14587006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 225 - 320
Target Start/End: Original strand, 32044752 - 32044847
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatga 320  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  32044752 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatga 32044847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 5700135 - 5700259
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||| ||||||||||||||   ||||| |||||||||||||||| || |||||||| | ||||| |||||||||||      
T  5700135 aaagcaaaactcaaaactgttaaaatttgagagagtctgatggctgattgtacataagaattgtccggactataaaatccaaaataataaacatgaattc 5700234  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    ||||||||||| |||||||||||||    
T  5700235 ggattttaaaacccggaatgcacaa 5700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 1945202 - 1945057
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||| ||||||||||||  ||||||   |||||||||||||||||| |||  |||||||||| |||||||||||| ||||||      
T  1945202 aaagcaaaagtcaaaactgccgaaatgtgagag--tctgatgactgattatacataagaattttccgaattataaaatccgaaatagtaaaaatgaattc 1945105  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    ||||||||||||||| | | ||||| |||| |||| ||| ||||||||    
T  1945104 ggattttaaaatccgaactccacaagggcatttttgaaaattttacag 1945057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 237110 - 237183
Alignment:
Q  15 tcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  237110 tcccttagaagggtcttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 237183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 2813081 - 2812996
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||| ||| ||||||   |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2813081 aaggaccatgactcccttagaatggacttcttatgggactccacccctcaaaatccaaaatttcatcgtttagacccatttttcat 2812996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 4508161 - 4508076
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||  ||||| || ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4508161 aaggaccatgactcccacagaagagacttcttaagggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 4508076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 5639161 - 5639246
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||| ||||||| || |||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||    
T  5639161 aaggaccatgactcctttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttatatccatttttcat 5639246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 29630781 - 29630716
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  29630781 gcccctcaaaatccaaaatttcatcgtttagactcatttttcatattctcagaaaaatccaaaaaa 29630716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 17264709 - 17264797
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatatt 91  Q
    |||||| ||||||||| ||||||||| |||||||  |||| || |||||||||||||||||| ||||||||||| ||||||||||||||    
T  17264709 aaggaccatgactcccctagaagggacttcttacgggacttcgtccctcaaaatccaaaatttcatcgtttagatccatttttcatatt 17264797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2539751 - 2539836
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | |||||| || |||||||  ||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  2539751 aaggaccatgactctcatagaagtgacttcttacgggactccgcccctcaaaatccaaaattcaatcgtttagactcatttttcat 2539836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 3717141 - 3717056
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||| ||||| |||||| || |||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3717141 aaggaccatggctcccctagaagagacttcttacgggactccgcccctcaaaatccaaaattccactgtttagacccatttttcat 3717056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 5699925 - 5699983
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5699925 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 5699983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 9905390 - 9905448
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9905390 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacctatttttcat 9905448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 14587420 - 14587335
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| | ||||||||||||||| | |||||||  ||||||||| |||||||||||||||||||| ||||| || ||||||||||    
T  14587420 aaggaccaagactcccttagaaggaacttcttacgggactccgccactcaaaatccaaaattccattgtttaaactcatttttcat 14587335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 339
Target Start/End: Complemental strand, 4655486 - 4655371
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    ||||||||| |||||| |||||||||  |||||| |||||||  |||||||||||||| ||  | ||||||||||||||| || |||| ||| ||||||     
T  4655486 aaagcaaaattcaaaactgctgaaataggagagattctgatagctgattatacataagcatatttcagattataaaattcaaattagtaaaaaatgaatt 4655387  T
Q  324 tggattttaaaatccg 339  Q
     |||||||||||||||    
T  4655386 cggattttaaaatccg 4655371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 24604213 - 24604138
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| ||||| |   |||||||| ||||||||||||||||||| ||||||||||| |||||    
T  24604213 atgactcccttagaagggacttcttgcggaactccgcctctcaaaatccaaaattccaccgtttagaccctttttt 24604138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 288
Target Start/End: Complemental strand, 33413263 - 33413200
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgt 288  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||| |||||||||||||    
T  33413263 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattacacataagaattgt 33413200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 7416125 - 7416171
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  7416125 tccgcccctcaaaatccaaaattcaatcgtttagacccatttttcat 7416171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 1945414 - 1945359
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  1945414 ttcttacgggactccgcccctcaaaatccaaaattccaacgtttagaccccttttt 1945359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 85
Target Start/End: Original strand, 16450553 - 16450600
Alignment:
Q  38 agactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16450553 agactccgcccatcaaaatccaaaattccatcgtttagacctattttt 16450600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 7413106 - 7413152
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  7413106 tccgcccctcaaaatccaaaatttcatcgtttagacccattattcat 7413152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 295
Target Start/End: Original strand, 23407276 - 23407346
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagatt 295  Q
    |||||||||||||||| || | |||| ||||||||||||||   |||||||||||||||||||||| ||||    
T  23407276 aaagcaaaactcaaaattgttaaaatatgagagagtctgatggctgattatacataagaattgtccggatt 23407346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 24603991 - 24603910
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaa 307  Q
    |||||||||||||||| ||||||||||||||||||||||||   | ||||| |||||||||| ||| |||||| |||| ||||    
T  24603991 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctaattat-cataagaattatccggattatgaaatccgaa 24603910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 29519813 - 29519911
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaat 322  Q
    |||||||||||||||| || |||||| |||||| |||||||   | |||||||||||||||||||| |||| || ||| |||| |||| ||||||||||    
T  29519813 aaagcaaaactcaaaactgttgaaatatgagagggtctgatgacttattatacataagaattgtccggattttagaatccgaattagtgaaacatgaat 29519911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 7423240 - 7423284
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  7423240 cgcccctcaaaatccaaaattcaaccgtttagacccatttttcat 7423284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 3365959 - 3366042
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttc 86  Q
    ||||| || ||||||  |||||| || ||||||| |||||||| | ||||||||| |||||| |||||||||||| ||||||||    
T  3365959 aaggattaagactcctctagaagagacttcttacgagactccgtcgctcaaaatctaaaatttcatcgtttagactcatttttc 3366042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29519611 - 29519661
Alignment:
Q  39 gactccgcccctcaaaatccaaaa-ttccatcgtttagacccatttttcat 88  Q
    |||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  29519611 gactcctcctctcaaaatccaaaaattccatcgtttagacccatttttcat 29519661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 85
Target Start/End: Complemental strand, 29289501 - 29289469
Alignment:
Q  53 aaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||||||||||||||||||||    
T  29289501 aaatccaaaattccatcgtttagacccattttt 29289469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 2539845 - 2539875
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  2539845 atttttcatattctcagaaaaatccgaaaaa 2539875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 8120195 - 8120153
Alignment:
Q  43 ccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||    
T  8120195 ccgcccctcaaaatccaaaattctatcatttagacctattttt 8120153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 17264808 - 17264838
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  17264808 atttttcatattctcagaaaaatccgaaaaa 17264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 29289327 - 29289257
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagatt 295  Q
    |||||||||||||||| |  |||||| ||||||||||||||   | |||||||||||| ||||||| ||||    
T  29289327 aaagcaaaactcaaaactaatgaaatatgagagagtctgatggcttattatacataagcattgtccggatt 29289257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 29289460 - 29289430
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  29289460 atttttcatattctcagaaaaatccgaaaaa 29289430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 13799164 - 13799107
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataag 282  Q
    ||||||||| |||||| ||||||||||| ||||| ||||||   ||||||||||||||    
T  13799164 aaagcaaaattcaaaactgctgaaatgtaagagattctgattgctgattatacataag 13799107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 17501297 - 17501369
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||||| || ||||  |||||||||  ||||||||||||||| ||||||||| |||| |||||    
T  17501297 gactcctttagaagggactttttacgggactccgcca-tcaaaatccaaaatttcatcgtttacaccctttttt 17501369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 14037598 - 14037542
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| ||||||||| ||||||| ||||||   |||||||||||||    
T  14037598 aaagcaaaattcaaaactgctgaaatatgagagattctgattgctgattatacataa 14037542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 31928753 - 31928571
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||     
T  31928753 aaagcaaaattcaaaactgctgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatcctaaatagtaaacatgaatcc 31928654  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||||| |||||||||  ||||||||| || |||||||  || ||||||||| ||||||||||| |||||||||    
T  31928653 ggattttaaaatccgaaatgcacaagagcaattttagaaattttacagggcgcgggagaaggccataggatggaaaaagtaat 31928571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 38692421 - 38692239
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||  |||||||||||||||||||     
T  38692421 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatctgaaatagtaaacatgaatcc 38692322  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||||||||||||||| | || |||| ||| |||||||  || ||||||||| ||||| | |||||||||||||    
T  38692321 agattttaaaatccggaatgcacaaggacatttttgaaaattttacagggcgcgggagaaggccatatggtgggaaaagtaat 38692239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 37183415 - 37183233
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||||||||||||| ||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  37183415 aaagcaaaactcaaaactactgaaatgtgagagagtttgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 37183316  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||| |||||||||||||||||| |||| |||| ||| |||||||  || |||||||||  |||||| ||| |||||||||    
T  37183315 ggatttgaaaatccggaatgcacaatggcatttttgaaaattttacagggcgcgggagaaggtcatagggtggaaaaagtaat 37183233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 225 - 406
Target Start/End: Original strand, 38872151 - 38872334
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   | |||||||||||||||||||| |||||||||||  |||||||||||||||||||     
T  38872151 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctaattatacataagaattgtccggattataaaatctgaaatagtaaacatgaatcc 38872250  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaatt 406  Q
    |||||||||||| |||||||||| | |||| ||||  || |||||||  || ||||||||| ||||| | ||||||||||||||    
T  38872251 ggattttaaaattcggaatgcactagggcattttttgaaattttacagggcgcgggagaaggccataaggtgggaaaagtaatt 38872334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 31220966 - 31220783
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  31220966 aaagcaaaactcaaaactgctgaaatgtgagagagtttgattgctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 31220867  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag---cacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||| ||| ||||| |||| ||||  || ||||||||   | ||| |||| |||||||| |||||||||||||    
T  31220866 gaattttaaaatccgtaatacacaagggcatttttggaaattttacagattcgcggcagaaaaccatagggtgggaaaagtaat 31220783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 40619612 - 40619433
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||||||||||||||||||   ||||   ||||||||||||| | |||||||||||  ||||||||||||||||||      
T  40619612 aaagcaaaactcaaaactactgaaatgtgagagagtctgatgactgat---acataagaattgttcggattataaaatctgaaatagtaaacatgaattc 40619516  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttacagca--cgggagaagaccataggatgggaaaagtaat 405  Q
     |||||||||||| ||||||||||||| || |||||||| ||||||||||  |||||||||||||||||||| ||||||||||    
T  40619515 tgattttaaaatctggaatgcacaaagacatttttaaaaattttacagcacgcgggagaagaccataggatgagaaaagtaat 40619433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 33488104 - 33488228
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  33488104 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 33488203  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    |||||||||||||||||||||||||    
T  33488204 ggattttaaaatccggaatgcacaa 33488228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 15799726 - 15799908
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | ||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||     
T  15799726 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgtctgattatacataagaattgtccggattataaaatccgaaataataaacatgaatcc 15799825  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt--aaaatttttacagcacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||||||||||| |||||||||| |||| ||||  |||| || ||  || | ||||||| | ||| |||||||||||||||    
T  15799826 ggattttaaaatccagaatgcacaagggcatttttgaaaaaattatagggcgcaggagaaggcgataagatgggaaaagtaat 15799908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 4064423 - 4064289
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||     
T  4064423 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatcc 4064324  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||||||||||||| |||| ||||    
T  4064323 ggattttaaaatccggaatgcacaagggcattttt 4064289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 225 - 359
Target Start/End: Original strand, 20892106 - 20892240
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||  ||||||||||||||||||| ||||   ||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||     
T  20892106 aaagcaaaactcaaagctgctgaaatgtgagagagtttgatggctgattatacctaagaattgtccggattataaaatccgaaatagtaaacatgaatcc 20892205  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||| ||||||||| |||| ||||    
T  20892206 ggattttaaaatccgaaatgcacaagggcattttt 20892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 29863053 - 29863177
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||| ||||||||||||||   |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||     
T  29863053 aaagcaaaactcaaaactgttaaaatatgagagagtctgatggctgattatacataagaattgtccggattatataattcgaaatagtaaacatgaatcc 29863152  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    ||||||||||||  |||||||||||    
T  29863153 ggattttaaaatatggaatgcacaa 29863177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 229 - 372
Target Start/End: Complemental strand, 32841598 - 32841454
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatctgga 327  Q
    |||||||||||| || ||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||||   |    
T  32841598 caaaactcaaaattgttgaaatgtgagagagtctgatagctgattatatataagaattgtccggattataaaatccgaaatagtgaaacatgaatccaaa 32841499  T
Q  328 ttttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||| ||||||| |||| |||| |||  |||||||    
T  32841498 ttttaaaatccggattgcacaagggcatttttgaaaaatttacag 32841454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 38372800 - 38372924
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| || |||||||||||||||||||||   ||||||||| |||||||| ||| |||||||||||  ||||||||||| |||||||     
T  38372800 aaagcaaaattcaaaactgttgaaatgtgagagagtctgatggctgattatacgtaagaattatccggattataaaatctgaaatagtaaatatgaatcc 38372899  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    |||||||||||||||||||||||||    
T  38372900 ggattttaaaatccggaatgcacaa 38372924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 269 - 359
Target Start/End: Original strand, 6157901 - 6157991
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6157901 tgattatacataagaattgtccgaattataaaatccgaaatagtaaacatgaatccggattttaaaatccggaatgcacaaaggcattttt 6157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 369
Target Start/End: Original strand, 39525250 - 39525393
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||| | ||||| ||||||   |||||||||||| ||||||||| ||||||||||| | |||||||||| |||||||     
T  39525250 aaagcaaaactcaaaactactgaaatataagagaatctgatggctgattatacata-gaattgtccggattataaaatccaaaatagtaaatatgaatcc 39525348  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaattttta 369  Q
    | |||||||||||||||||||| ||||||| |||||||| |||||    
T  39525349 gaattttaaaatccggaatgcataaaggcatttttaaaaatttta 39525393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 39525038 - 39525145
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||||||||||||| | |||||    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  39525038 aaggaccatgactcccttagaaggaacttcttgtgggactctgcccctcaaaatccaaaattccatcgtttagaccaatttttcatattctcataaaaat 39525137  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  39525138 ccgaaaaa 39525145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 372
Target Start/End: Original strand, 14112257 - 14112357
Alignment:
Q  272 ttatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca 371  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||  || |||||||    
T  14112257 ttataaataagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccggaatgcacaagggcatttttgcaaattttaca 14112356  T
Q  372 g 372  Q
    |    
T  14112357 g 14112357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 269 - 354
Target Start/End: Original strand, 6157676 - 6157761
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggca 354  Q
    ||||||||| |||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  6157676 tgattatacgtaagaattgtctggattataaaatccgaaatagtaaacatgaatccggattttaaaatccggaatgcacaagggca 6157761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 12464733 - 12464620
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| ||||||||||||||||| ||||||   |||||||||||||||||| |||| || ||||||| ||||||||||||||||| ||     
T  12464733 aaaggaaaactcaaaactgctgaaatgtgagagattctgatgactgattatacataagaattctccaaataataaaatccgaaatagtaaacatgattcc 12464634  T
Q  325 ggattttaaaatcc 338  Q
    ||||| ||||||||    
T  12464633 ggattataaaatcc 12464620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 406
Target Start/End: Complemental strand, 24203348 - 24203167
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||||||||||  | |||||||||||||  |||||||  |||||||| ||||||||||||| ||||||||||| ||||| ||||||||||||||     
T  24203348 aaagcaaaactcaaaacagttgaaatgtgagag--tctgatagatgattatatataagaattgtccggattataaaatccgaaaaagtaaacatgaatcc 24203251  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt--aaaatttttacagcacgggagaagaccataggatgggaaaagtaatt 406  Q
    | ||||||||||||| ||| ||| | |||| ||||  ||| ||| ||  || |||||||||  || ||| ||||||||||||||    
T  24203250 gaattttaaaatccgaaatacaccatggcatttttggaaattttgtagggcgcgggagaaggtcacagggtgggaaaagtaatt 24203167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 14112127 - 14112211
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||| |||| ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14112127 aaggaccatgaatcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 14112211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 37183640 - 37183528
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-----atttttcatattctcaga 97  Q
    |||||| ||||||||| |||||||||  ||||||  ||||||||||||||||||||||||||||||| |||||||||     ||||||||||||||||||    
T  37183640 aaggaccatgactcccgtagaagggacatcttacgggactccgcccctcaaaatccaaaattccatcatttagacccatttgatttttcatattctcaga 37183541  T
Q  98 aaaatccgaaaaa 110  Q
    ||||| |||||||    
T  37183540 aaaattcgaaaaa 37183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 6156993 - 6157075
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  6156993 aaggaccatgactcccgtagtagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 6157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 26898662 - 26898577
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26898662 aaggaccatgactcctgtagaagggacttcttacaggactccgcccctcaaaatccaaaatttcatcgtttagactcatttttcat 26898577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 31928984 - 31928899
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| ||||| |  |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  31928984 aaggaccatgactcccttagaagggacttcttgcgggactccgcccttcaaaatccaaaatttcatcgtttagacccatttttcat 31928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 230 - 406
Target Start/End: Original strand, 15958252 - 15958431
Alignment:
Q  230 aaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggatt 329  Q
    ||||||||||| | ||||||||||||||||| ||||   | ||||| |||||||||| | | ||||||||||| | |||||||||||||||||    |||    
T  15958252 aaaactcaaaactactgaaatgtgagagagtttgatggctaattatgcataagaattattcggattataaaatccaaaatagtaaacatgaattcaaatt 15958351  T
Q  330 ttaaaatccggaatgcacaaaggcaattttaaaatttttacagcac--gggagaagaccatagga-tgggaaaagtaatt 406  Q
    |||||||||  ||||||||||| || |||||||| |||||||| ||  || | |||| ||||||| ||||||||||||||    
T  15958352 ttaaaatccaaaatgcacaaagacatttttaaaaattttacagaacgtggaacaagatcataggattgggaaaagtaatt 15958431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 26189944 - 26189849
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatga 320  Q
    |||||||||||||||| ||||||||||||||||| ||||||   |||||| |||||||||||||||  ||||||||||  ||||||||||||||||    
T  26189944 aaagcaaaactcaaaactgctgaaatgtgagagattctgatggctgattaaacataagaattgtccgaattataaaatctgaaatagtaaacatga 26189849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 32841823 - 32841748
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  32841823 atgactcccctagaagggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 32841748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 26898424 - 26898347
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    |||||||||||||||| || | |||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  26898424 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatggctgattatacataagaattgtccagattataaaat 26898347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 38692642 - 38692557
Alignment:
Q  3 aaggactatgactcccttag-aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  38692642 aaggaccatgactcccttaggaagggacttcttacgggactccgcccctcaaaatccaaaattctatcgtttagacacatttttca 38692557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 7884694 - 7884777
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaa 308  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||  | ||||||||||| |||||    
T  7884694 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgatcggattataaaatccgaaa 7884777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 26190174 - 26190096
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| ||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26190174 atgactcccctagaaggaacttcttaagggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 26190096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 31221190 - 31221114
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  31221190 tgacttccatagaagggacttcttacgagactccgcccctcaaaatccaaaatttcatcgtttaga-ccatttttcat 31221114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 41253577 - 41253666
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaa 101  Q
    |||||||||||||| || |||||   |||||||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  41253577 gactcccttagaagagacttctttagagactccgaccttcaaaatctaaaatttcatcgtttagacccatttttcatatactcagaaaaa 41253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 11186037 - 11185961
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| | ||||||| ||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  11186037 gactcccgttgaagggacttcttacgatactccgcccctcaaaattcaaaattcaatcgtttagacccatttttcat 11185961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 33487880 - 33487955
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| |||||    ||| |||||||| ||||||||||||||||||||||||||||||||||    
T  33487880 atgactcccttagaagggacttcttttgggaccccgcccctaaaaatccaaaattccatcgtttagacccattttt 33487955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 27158385 - 27158431
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27158385 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 27158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 27212972 - 27213046
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||| ||||||||| |||||||  ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  27212972 atgactcccctagaagggacttcttacgggactccgcccctcaaaatctaaaattccattgtttagacccttttt 27213046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 5456327 - 5456400
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| |||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||| | ||||||||    
T  5456327 gactcacttagaagggatttcttacgggactccgcctctcaaaatccaaaatttcatcgtttaaatccattttt 5456400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 7884456 - 7884541
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| |||||| || |||||||   |||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  7884456 aaggaccatgactcccgtagaagagacttcttacggaactccgcccctcaaaatctaaaatttcattgtttagacccatttttcat 7884541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 40619826 - 40619762
Alignment:
Q  21 agaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||||||||    
T  40619826 agaaggaacttcttacgggactccgcccctcaaaatccaaaattccatcatttagacccattttt 40619762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 26093731 - 26093802
Alignment:
Q  13 actcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    |||||| |||| |||| |||||||  |||||| |||||||||||||||||||||||| ||||||||||||||    
T  26093731 actcccgtagaggggacttcttacgggactcctcccctcaaaatccaaaattccatcatttagacccatttt 26093802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 20891881 - 20891959
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| || |||||| |||||||  || |||| || |||||||||||||||||||||||||||| ||||||||||    
T  20891881 atgactcccctacaagggacttcttacgggattccgtccttcaaaatccaaaattccatcgtttagacacatttttcat 20891959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 38372563 - 38372645
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||| ||||||||| || |||||||  |||||| |||||||||||||||||||||||||  ||||||| |||||    
T  38372563 aaggaccatgacttccttagaagagacttcttacgggactccacccctcaaaatccaaaattccatcgcctagaccctttttt 38372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 4064587 - 4064530
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  4064587 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaatccaaaaaa 4064530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 12464977 - 12464892
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||  ||||||| | |||||||  ||||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  12464977 aaggaccatgactcctatagaaggaacttcttacgggactctgcccctcaaaatccaaaattccattatttagacctatttttcat 12464892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 16429250 - 16429323
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||| |||||||||||| |||||||  |||||||||||||||||| |||||||  ||||||||||||| |||||    
T  16429250 gactaccttagaagggacttcttacgggactccgcccctcaaaattcaaaattttatcgtttagaccctttttt 16429323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 21070636 - 21070709
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||||||| ||||||   ||| | |||||||||||||||||||||||| ||||||||||||||||    
T  21070636 gactcccctagaagggacttcttattggacactgcccctcaaaatccaaaattccattgtttagacccattttt 21070709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 28445348 - 28445284
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    ||||||||||||||||| ||||||  | ||||||||| ||||||||||||||||||||||||||||    
T  28445348 gactcccttagaagggacttcttatgatactccgccc-tcaaaatccaaaattccatcgtttagac 28445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 15799523 - 15799569
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15799523 gactccacccctcaaaatccaaaattccatcgtttagaccaattttt 15799569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 15958011 - 15958093
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || ||||||||||||| || ||||||   |||| |||| |||||||||||||||| ||||||||||||| ||||||    
T  15958011 aaggaccataactcccttagaagcgacttcttatgggacttcgcctctcaaaatccaaaatttcatcgtttagaccaattttt 15958093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 18515104 - 18515150
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  18515104 gactccgcccctcaaaatctaaaattccatcatttagacccattttt 18515150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 33331420 - 33331478
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||| |||||||||||||    
T  33331420 tagaagggacttcttaccagacttcgtccctcaaaatccaaaatttcatcgtttagacc 33331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 38030843 - 38030770
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaa 342  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||||  | || ||||| | ||||||||||    
T  38030843 tgattatacataagaattgtccggattataaaatctgaaatagtaaacaccattccggattatgaaatccggaa 38030770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 26622394 - 26622461
Alignment:
Q  17 ccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||| | || ||||||  ||||||||||||||||||| |||||||  ||||||||||||||||||    
T  26622394 ccttagatgagacttcttatgagactccgcccctcaaaattcaaaattttatcgtttagacccatttt 26622461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 6800763 - 6800725
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  6800763 gactccgcccctcaaaatccaaaatttcatcgtttagac 6800725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 43388009 - 43387944
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||| ||| |||||||  ||||||| || |||||||||||||||||||| ||||||||    
T  43388009 gactcccttagaaaggacttcttacgggactccgtcc-tcaaaatccaaaattccatcatttagacc 43387944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 6800575 - 6800498
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    ||||||||| |||||| ||||||||||||||||| ||||||   |||||||||||||  ||  || ||||||||||||    
T  6800575 aaagcaaaattcaaaactgctgaaatgtgagagattctgattactgattatacataaccatattcaagattataaaat 6800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 8739132 - 8739079
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattc 65  Q
    ||||||||||||||| | || ||||  |||||||||||||||||||||||||||    
T  8739132 gactcccttagaaggaacttattacgggactccgcccctcaaaatccaaaattc 8739079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 38640938 - 38640979
Alignment:
Q  47 ccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  38640938 ccctcaaaatccaaaattccatcatttagacccttttttcat 38640979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 5247316 - 5247276
Alignment:
Q  44 cgcccctcaaaatccaaaattccatcgtttagacccatttt 84  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  5247316 cgcccctcaaaatccaaaatttcatcgtttagactcatttt 5247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 28083193 - 28083157
Alignment:
Q  45 gcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    |||||||||||||||||||||||||||| ||||||||    
T  28083193 gcccctcaaaatccaaaattccatcgttcagacccat 28083157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 19027338 - 19027393
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| ||||| | |||||||||||||||||||  |||||||||||| ||||||    
T  19027338 ttcttacgagacttcacccctcaaaatccaaaattatatcgtttagacctattttt 19027393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 5535250 - 5535204
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||    
T  5535250 tccgcccatcaaaatcataaattccatcgtttagaccaatttttcat 5535204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 20891970 - 20892000
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  20891970 atttttcatattctcagaaaaatccgaaaaa 20892000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 26095367 - 26095417
Alignment:
Q  38 agactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| ||||||||||||| |||| ||  ||||||||||||||||||||||    
T  26095367 agacttcgcccctcaaaattcaaagttatatcgtttagacccatttttcat 26095417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 28624403 - 28624357
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||| ||||||||| ||||||| |||||||||||||||||||    
T  28624403 gactctgccactcaaaatctaaaattctatcgtttagacccattttt 28624357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 33487968 - 33487998
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  33487968 atttttcatattctcagaaaaatccgaaaaa 33487998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 34530208 - 34530249
Alignment:
Q  36 caagactccgcccctcaaaatccaaaattccatcgtttagacc 78  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  34530208 caagactccgccc-tcaaaattcaaaattccatcgtttagacc 34530249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 77
Target Start/End: Original strand, 42289754 - 42289792
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  42289754 gactctgcccctcaaaatccaaaattctatcgtttagac 42289792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 12847717 - 12847749
Alignment:
Q  55 atccaaaattccatcgtttagacccatttttca 87  Q
    |||||||||| ||||||||||||||||||||||    
T  12847717 atccaaaatttcatcgtttagacccatttttca 12847749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 225 - 404
Target Start/End: Complemental strand, 25491011 - 25490830
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||||| |||| ||||||||||||||||||||||||   |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||     
T  25491011 aaagcaaaacttaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgttcggattataaaatccgaaatagtaaacatgaatcc 25490912  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaa 404  Q
    ||||||||||||||||||||||||| |||| ||||  || |||||||  || ||  ||||||||||| | ||||||||||||    
T  25490911 ggattttaaaatccggaatgcacaagggcatttttggaaattttacagggcgcgaaagaagaccataaggtgggaaaagtaa 25490830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 230 - 372
Target Start/End: Original strand, 47874262 - 47874404
Alignment:
Q  230 aaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggatt 329  Q
    ||||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||  |||||    
T  47874262 aaaactcaaaactgctgaaatatgagagagtctgatagctgattatacataagaattgtccggattataaaatccgaaataataaacatgaatgcggatt 47874361  T
Q  330 ttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||||||||||||||| |||| |||||||| ||||||||    
T  47874362 ttaaaatccggaatgcacaagggcatttttaaaaattttacag 47874404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 236 - 405
Target Start/End: Complemental strand, 54631108 - 54630937
Alignment:
Q  236 caaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaa 335  Q
    ||||| ||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||||||||||||||    
T  54631108 caaaactgctgaaatgtgagagagtgtgatagttgattatacataagaattctccggattataaaatccggaatagtaaacatgaatctggattttaaaa 54631009  T
Q  336 tccggaatgcacaaaggcaattttaaaatttttacag--cacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||| || | |||| |||| ||| ||||||||  | || |||||| ||||||| |||||||||||||    
T  54631008 tccggaatgtacgagggcatttttgaaaattttacaggacgcgagagaaggccatagggtgggaaaagtaat 54630937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 25752076 - 25751895
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || |||||||||||||||||||||   |||||||||||||||||||| | ||||||||||| | |||| |||||||||||||     
T  25752076 aaagcaaaactcaaaactgttgaaatgtgagagagtctgatggctgattatacataagaattgttcggattataaaatccaaaattgtaaacatgaatcc 25751977  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    |||||||||||||||||||||||||| ||| |||| ||| |||||||  || ||||||||| ||||||| | |||||||||||    
T  25751976 ggattttaaaatccggaatgcacaaaagcatttttgaaaattttacagggcgcgggagaaggccatagggt-ggaaaagtaat 25751895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 7932143 - 7932325
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| |||||| ||||||||||||||||||||||||   |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||     
T  7932143 aaagcaaaattcaaaactgctgaaatgtgagagagtctgatgactgattatacataagaattgttcggattataaaatccgaaatagtaaacatgaatcc 7932242  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    ||||||||||||  |||||||| || |||| |||| ||| |||||||  || |||||||||  ||| |||| |||||||||||    
T  7932243 ggattttaaaatttggaatgcataagggcatttttgaaaattttacagggcgcgggagaaggtcattggataggaaaagtaat 7932325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 46439912 - 46439730
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||     
T  46439912 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattttccggattataaaatttgaaatagtaaacatgaatcc 46439813  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||| | ||||||||  |||| |||| ||| |||||||  |  ||||||||| ||||||| || ||||||||||    
T  46439812 gaattttaaaatctgaaatgcacatgggcattttttaaaattttacagggtgcgggagaaggccatagggtgagaaaagtaat 46439730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 225 - 359
Target Start/End: Original strand, 8106920 - 8107054
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  8106920 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattataaataagaattgtccagattataaaatccgaaatagtaaacatgaatct 8107019  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    | |||||||||||| || | ||||| |||| ||||    
T  8107020 gaattttaaaatcctgattacacaagggcattttt 8107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 225 - 390
Target Start/End: Complemental strand, 48318711 - 48318545
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  48318711 aaagcaaaactcaaaactgctgaaatgtgagagagtctga-ggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 48318613  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccatag 390  Q
    | ||||||||||| ||||||||||| |||| ||||  || |||||||  || ||||||||| ||||||    
T  48318612 gaattttaaaatctggaatgcacaagggcatttttggaaattttacagggcgcgggagaaggccatag 48318545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 55052315 - 55052181
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | |||||||||||||||||||   |||||||||||||||||| ||| ||||||||||| | ||||||||||||||||||     
T  55052315 aaagcaaaactcaaaactgttaaaatgtgagagagtctgatgactgattatacataagaattatccggattataaaatccaaaatagtaaacatgaatcc 55052216  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||||||||||||| |||| ||||    
T  55052215 ggattttaaaatccggaatgcacaagggcattttt 55052181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 17932766 - 17932643
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  17932766 aaagaaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 17932667  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    ||||||| ||||||| |||||||||    
T  17932666 ggatttt-aaatccgaaatgcacaa 17932643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 53893647 - 53893465
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||| ||||||||| ||||||||||||||||||||||||   |||||||||||||||||| ||  |||||||||||  |||||||||||||||||||     
T  53893647 aaagcagaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattttctggattataaaatctgaaatagtaaacatgaatcc 53893548  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
      |||||||||||||||||||| ||  ||| |||| ||| |||||||  ||  |||||||| ||||||| |||||||||||||    
T  53893547 aaattttaaaatccggaatgcataagagcatttttgaaaattttacagggcgtgggagaaggccatagggtgggaaaagtaat 53893465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 48318923 - 48318816
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||| | | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48318923 aaggaccatgactctcctggaagggacttcttacaggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattcacagaaaaat 48318824  T
Q  103 ccgaaaaa 110  Q
    | ||||||    
T  48318823 ctgaaaaa 48318816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 371
Target Start/End: Complemental strand, 2505657 - 2505511
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    ||||||||| ||| || ||||||||||||||||||| ||||   |||||||||||||||||| | | ||||||||||| |||||||||||| |||||||     
T  2505657 aaagcaaaattcacaattgctgaaatgtgagagagtttgatggctgattatacataagaattattcggattataaaatccgaaatagtaaatatgaatcc 2505558  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca 371  Q
    |||||||||||||| |||| ||||| |||| |||| ||| |||||||    
T  2505557 ggattttaaaatccagaatacacaagggcatttttgaaaattttaca 2505511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 359
Target Start/End: Original strand, 38536719 - 38536853
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || | ||||||||||||||| |||   |||||||||||||||||| ||||||||||||||| | |||||||||||||||||      
T  38536719 aaagcaaaactcaaaactgttaaaatgtgagagagtccgatgactgattatacataagaattatccagattataaaatccaaaatagtaaacatgaattc 38536818  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
     |||||||||||||| ||||||||| |||| ||||    
T  38536819 agattttaaaatccgaaatgcacaagggcattttt 38536853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 225 - 349
Target Start/End: Original strand, 40704471 - 40704595
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| || ||||||||| |||||||||||   ||||||||||||||| ||| || ||||||||||| | ||||||||||||||||||     
T  40704471 aaagcaaaactcaaaactgttgaaatgtgggagagtctgatggctgattatacataagagttgcccggattataaaatccaaaatagtaaacatgaatcc 40704570  T
Q  325 ggattttaaaatccggaatgcacaa 349  Q
    ||||||||||||||  |||||||||    
T  40704571 ggattttaaaatccaaaatgcacaa 40704595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 38417099 - 38417205
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaat 102  Q
    |||||| ||||||| | ||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||| ||||||    
T  38417099 aaggaccatgactcacgtagaagggacttcttacaggactccgcccttcaaaatccaaaatttcatcgtttaga-ccatttttcatattctcataaaaat 38417197  T
Q  103 ccgaaaaa 110  Q
    ||||||||    
T  38417198 ccgaaaaa 38417205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 6228444 - 6228327
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||| | ||||   |||||||||||||||||||||| ||||||||||| ||| ||||||||||||| | |    
T  6228444 aaagcaaaactcaaaactgctgaaatgtgagagattatgatggctgattatacataagaattgtccggattataaaatccgagatagtaaacatgattat 6228345  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||||||||    
T  6228344 ggattatgaaatccggaa 6228327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 225 - 320
Target Start/End: Complemental strand, 41412843 - 41412748
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatga 320  Q
    |||||||||||||||| | ||||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  41412843 aaagcaaaactcaaaactactgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatga 41412748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 25752302 - 25752220
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| |||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  25752302 aaggaccatgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccattttt 25752220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 32442363 - 32442457
Alignment:
Q  235 tcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggatt 329  Q
    |||||| ||||||||||||||||| ||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  32442363 tcaaaactgctgaaatgtgagagattctgatggctggttatacataagaattgtccagattataaaattcgaaatagtaaacatgattccggatt 32442457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 27631996 - 27631879
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| | ||||||||||| ||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  27631996 aaagcaaaactcaaaactactgaaatgtgaaagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 27631897  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| | ||||| ||||    
T  27631896 ggattatgaaatctggaa 27631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 225 - 329
Target Start/End: Original strand, 34973399 - 34973503
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |  |||||||||||||| ||||||   |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||     
T  34973399 aaagcaaaactcaaaactattgaaatgtgagagattctgatggctgattatacataagaattgtccggattataaaatccgaaatagtaaacatgattcc 34973498  T
Q  325 ggatt 329  Q
    |||||    
T  34973499 ggatt 34973503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 344
Target Start/End: Complemental strand, 31582033 - 31581958
Alignment:
Q  269 tgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatg 344  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31582033 tgattatacataagaattttccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccggaatg 31581958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 7931964 - 7932046
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  7931964 aaggaccatgactcccctagaagggacttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacacattttt 7932046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 27741780 - 27741667
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| |||||| |||| ||||||||||||||||||||||||    |||||||||||| |||||||| | ||||||||| ||||||||||| ||||||||     
T  27741780 aaagaaaaactaaaaactgctgaaatgtgagagagtctgatgaccgattatacataaaaattgtccgggttataaaatccgaaatagtaatcatgaatcc 27741681  T
Q  325 ggattttaaaatcc 338  Q
     ||||| |||||||    
T  27741680 agatttcaaaatcc 27741667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 38536479 - 38536564
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| || ||||| |||||| ||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536479 aaggaccataactcctttagaaaggacttcttatgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 38536564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 46440131 - 46440047
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| |||||||||  |||||||| |||||||  |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  46440131 aaggaccatgactcccaaagaagggacttcttacgggactccgcccctcaaaatccaaaatttcatcgtttagacacatttttca 46440047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 8106709 - 8106808
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaa 109  Q
    ||||||||| ||||||| | |||||||  ||||||||| ||||||||| ||||||  |||||||||| |||||||||||||||||| |||||||| ||||    
T  8106709 atgactcccgtagaaggaacttcttacgggactccgcctctcaaaatcaaaaattaaatcgtttagatccatttttcatattctcaaaaaaatccaaaaa 8106808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 19835835 - 19835910
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| || |||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  19835835 atgactcccctaaaagggacttcttacgggactccgcccctcaaaatccaaaattccattgtttagacccattttt 19835910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 25538830 - 25538755
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| || |||||||  ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  25538830 atgactcccttagaagagacttcttacgggactccgcccctcaaaatccaaaataccatcgtttagacacattttt 25538755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 359
Target Start/End: Original strand, 29823154 - 29823256
Alignment:
Q  256 agagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaaaggcaa 355  Q
    ||||||||| |  |||||||||||||| ||||||| ||||||||||| | |||||||||||||||||| ||| |||||||||| ||| |||||||||||     
T  29823154 agagtctgacaactgattatacataaggattgtccggattataaaatccaaaatagtaaacatgaatccgga-tttaaaatccagaaagcacaaaggcat 29823252  T
Q  356 tttt 359  Q
    ||||    
T  29823253 tttt 29823256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 6228665 - 6228592
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattt 83  Q
    ||||||||| ||||||| | |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||    
T  6228665 atgactcccgtagaaggaacttcttacaggactcctcccctcaaaatccaaaattccattgtttagacccattt 6228592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18051048 - 18050963
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||| | || ||||  || |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18051048 aaggaccatgactcccgtagaaggaactttttacgggattccgcccctcaaaatccaaaattccatcgtttagacccttttttcat 18050963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 25491254 - 25491169
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||||||||||||| |||| |   || |||| |||||||||||||||||||||||||||||||| |||||||||    
T  25491254 aaggaccatgactcccttagaagggacttctcaagggattccgtccctcaaaatccaaaattccatcgtttagaccaatttttcat 25491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 29822888 - 29822973
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||||||| ||| |||  ||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  29822888 aaggaccatgactcccgtagaagggacttcctacgggactctgcccctcaaaattcaaaattccatcgtttagactcatttttcat 29822973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 34973172 - 34973257
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||| | || |||||| ||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34973172 aaggaccatgactctcctaaaagggacttctttcgggactccgcccctcaaaatccaaaattccattgtttagacccatttttcat 34973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 40703972 - 40704057
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||| | |||||||| | |||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  40703972 aaggaccatgacttcattagaaggaacttcttacgggactccgcccctcaaaatctaaaattccatcgtttaaacccatttttcat 40704057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 54631351 - 54631266
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| ||||||||| ||||| ||| |||||||  |||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  54631351 aaggaccatgactcccatagaaaggacttcttacgggactccgcacctcaaaatacaaaattccatcgtttagaccaatttttcat 54631266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 53893884 - 53893800
Alignment:
Q  4 aggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| || |||||| ||||||||| ||||||   | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  53893884 aggaccatcactcccgtagaagggacttcttatgggtctccgcccctcaaaatccaaaatttcatcgtttagacccatttttcat 53893800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 37222286 - 37222357
Alignment:
Q  17 ccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| | ||||||| ||||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  37222286 ccttagaaggaacttcttacgagactcctcccctcaaaatccaaaattccaacgtttagacccttttttcat 37222357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 14474055 - 14473989
Alignment:
Q  22 gaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||| |||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  14474055 gaagggacttcttacgggactccgcccctcaagatccaaaatttcatcgtttagacccatttttcat 14473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17932996 - 17932914
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||||||||||||| | | ||||||  ||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  17932996 aaggaccatgactcccttagaaagaacttcttaagagattccgcctctcaaaatccaaaattccatagtttagacccattttt 17932914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 49001407 - 49001341
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||||||||||||||||| |||||||  |||||||| ||||||||||||||||| |||||||||||    
T  49001407 atgactcccttagaagggacttcttacgggactccgctcctcaaaatccaaaattacatcgtttaga 49001341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 3702885 - 3702808
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaat 302  Q
    |||||||||||||||| |||| |||||||||||||||||||   ||||||| |||||||||||||| |||| ||||||    
T  3702885 aaagcaaaactcaaaactgcttaaatgtgagagagtctgatggctgattatccataagaattgtccggattttaaaat 3702808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 372
Target Start/End: Complemental strand, 49001186 - 49001038
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagt-aaacatgaatc 323  Q
    ||||||||| |||||| |||| ||||||| |||| ||||||  ||||||||||||||| || || | ||||||||||| |||| |||| ||||||||||     
T  49001186 aaagcaaaattcaaaactgctcaaatgtgtgagattctgattgttgattatacataagcatagttcggattataaaatccgaattagtgaaacatgaatt 49001087  T
Q  324 tggattttaaaatccggaatgcacaaaggcaattttaaaatttttacag 372  Q
     ||||| | ||||||| | ||||||| |||| |||| |||  |||||||    
T  49001086 cggattatgaaatccgaattgcacaagggcatttttgaaaaatttacag 49001038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 31582250 - 31582207
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31582250 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 31582207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 3703107 - 3703029
Alignment:
Q  10 atgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||||||||  || ||||||   ||||||| || |||||||||||||||||||||||| ||||||||||||||    
T  3703107 atgactcccttagaaatgacttcttatgggactccgtccttcaaaatccaaaattccatcgtttggacccatttttcat 3703029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 20083317 - 20083363
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  20083317 tccgctcctcaaaatccaaaattccatcgtttagacccatttttcat 20083363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 52089562 - 52089628
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatc 69  Q
    |||||| || |||||| ||||||||| |||||||  |||||||||||||||||||||||||||||||    
T  52089562 aaggaccataactcccatagaagggacttcttacgggactccgcccctcaaaatccaaaattccatc 52089628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 2505890 - 2505801
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagaccc-atttttcatatt 91  Q
    |||||| |||||||||  |||||||| |||||||  || || ||||||||||||||||||||| |||||||| |||| ||||||||||||    
T  2505890 aaggaccatgactccccaagaagggacttcttacgggattctgcccctcaaaatccaaaattctatcgtttacaccctatttttcatatt 2505801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 19836011 - 19836068
Alignment:
Q  292 gattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaatgcacaa 349  Q
    ||||||||||| | |||||||||||||||||| | |||||||||||||||||||||||    
T  19836011 gattataaaatccaaaatagtaaacatgaatccgaattttaaaatccggaatgcacaa 19836068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 32601182 - 32601231
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  32601182 gactccgccgctcaaaatccaaaattccatcgtttagacctatttttcat 32601231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 48629409 - 48629340
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||||||| |||||||    
T  48629409 ttagaagggacttcttacgagattccgcccctcaaaatttaaaattccatcatttagacccaattttcat 48629340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 55052486 - 55052429
Alignment:
Q  53 aaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||| |||||||||| |||||    
T  55052486 aaatccaaaattcaatcgtctagacccatttttcatattcttagaaaaatccaaaaaa 55052429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 23524327 - 23524440
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |  |||||||||||||| ||||||   ||||||||   ||| |||||||  |||||||||| ||||||||||||||||| ||     
T  23524327 aaagcaaaactcaaaactaatgaaatgtgagagattctgatggctgattata---aag-attgtccgaattataaaatccgaaatagtaaacatgattcc 23524422  T
Q  325 ggattttaaaatccggaa 342  Q
    ||||| ||||||| ||||    
T  23524423 ggattataaaatctggaa 23524440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 6003505 - 6003447
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  6003505 ttcttacgggactccgcccctcaaaatccaaaattctattgtttagaccaatttttcat 6003447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 4936572 - 4936499
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||  | ||||||   ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  4936572 gactcccttagaagatacttcttatgggactccgtccctcaaaatccaaaatttcatcttttagacccattttt 4936499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 5803251 - 5803202
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  5803251 gactccaccccacaaaattcaaaattccatcgtttagacccatttttcat 5803202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 23524095 - 23524180
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||  |||||||| || |||   |||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  23524095 aaggaccatgactcccgaagaagggacttattatgggacttcgcccctcaaaatccaaaatttcattatttagacccatttttcat 23524180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 42497785 - 42497712
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||| | ||||||  |||||||| ||||||||||||||||||| |||||| ||| ||||||||| ||||||    
T  42497785 gactcccatggaaggggcttcttacaggactccgcccctcaaaatctaaaatttcattgtttagacctattttt 42497712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 49397319 - 49397404
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||| |||||||||| |||||  | ||||||   || || |||||||||||||||||||| ||| |||||||||||||||||||    
T  49397319 aaggaccatgactccctaagaagaaacttcttatgggattcggcccctcaaaatccaaaatttcattgtttagacccatttttcat 49397404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 38417298 - 38417410
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||| ||||||||||| || |||||||| ||||||||||||   || ||||||||||||||||||| |||| || ||| |||| |   ||||||||||      
T  38417298 aaaggaaaactcaaaactgttgaaatgtaagagagtctgatggctgcttatacataagaattgtcctgattttagaatccgaattgtgaaacatgaattc 38417397  T
Q  325 ggattttaaaatc 337  Q
    ||||| |||||||    
T  38417398 ggattataaaatc 38417410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 47072334 - 47072377
Alignment:
Q  42 tccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||||||||||| ||||||||||||||||||||| |||||    
T  47072334 tccgcccctcaaaatctaaaattccatcgtttagaccctttttt 47072377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 370
Target Start/End: Complemental strand, 18050773 - 18050719
Alignment:
Q  316 catgaatctggattttaaaatccggaatgcacaaaggcaattttaaaatttttac 370  Q
    |||||||| ||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  18050773 catgaatccggattttaaaatccggaatgcacaagggcatttttgaaaattttac 18050719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 27741961 - 27741899
Alignment:
Q  14 ctcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttaga 76  Q
    ||||| ||||||| | ||||||   |||||||||||||||||||||||||||||| |||||||    
T  27741961 ctcccgtagaaggaacttcttatgggactccgcccctcaaaatccaaaattccattgtttaga 27741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 41322934 - 41322870
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| || |||||||  || |||||||||||||||||| | |||||||||||||||||||||||    
T  41322934 tagaagagacttcttacgggattccgcccctcaaaatccata-ttccatcgtttagacccattttt 41322870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 47784338 - 47784383
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  47784338 actcctcccctcaaaatccaaaatttcatcgtttagaccaattttt 47784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 48095704 - 48095639
Alignment:
Q  20 tagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||| ||||| |  |||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  48095704 tagaagggacttcttgcgggactccgcctttcaaaatccgaaattccatcgattagacccattttt 48095639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 42340236 - 42340188
Alignment:
Q  242 tgctgaaatgtgagagagtctgatatttgattatacataagaattgtcc 290  Q
    ||||||||||| ||||||||||||  ||||||||||||||| |||||||    
T  42340236 tgctgaaatgttagagagtctgatggttgattatacataagtattgtcc 42340188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 5043641 - 5043696
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| ||||||| | ||||||||||||||||||||| ||||||| || |||||||    
T  5043641 ttcttgcaagacttcacccctcaaaatccaaaattccttcgtttaaactcattttt 5043696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 39118482 - 39118537
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||||| ||| || ||||| ||||||||||||| ||||||||||| ||||||||    
T  39118482 ttcttacatgacaccaccccttaaaatccaaaatttcatcgtttagaaccattttt 39118537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 337
Target Start/End: Complemental strand, 41322729 - 41322615
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttg--attatacataagaattgtccagattataaaattcgaaatagtaaacatgaat 322  Q
    ||||||||| ||||||  | |||||||||||||| ||||||   ||  |||||||||||| || || | ||||||||||| |||| ||  ||||||||||    
T  41322729 aaagcaaaattcaaaacagatgaaatgtgagagattctgattgctgatattatacataagtatagttcggattataaaatccgaattaagaaacatgaat 41322630  T
Q  323 ctggattttaaaatc 337  Q
      |||||||||||||    
T  41322629 tcggattttaaaatc 41322615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 3703014 - 3702984
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  3703014 atttttcatattctcagaaaaatccgaaaaa 3702984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 29822982 - 29823012
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  29822982 atttttcatattctcagaaaaatccgaaaaa 29823012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 31582202 - 31582172
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  31582202 atttttcatattctcagaaaaatccgaaaaa 31582172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 47456950 - 47456984
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgttta 74  Q
    |||||| ||||||||||||||||||||||||||||    
T  47456950 actccgtccctcaaaatccaaaattccatcgttta 47456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 47874119 - 47874149
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  47874119 atttttcatattctcagaaaaatccgaaaaa 47874149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Complemental strand, 54631255 - 54631225
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  54631255 atttttcatattctcagaaaaatccgaaaaa 54631225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 372238 - 372307
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccat 81  Q
    |||| ||||| |||||| |||||||  |||||| ||||||||||| ||||||  ||||||||| ||||||    
T  372238 gacttccttataagggacttcttacgggactcctcccctcaaaattcaaaatatcatcgtttaaacccat 372307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 25140658 - 25140586
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||| | ||||| |  || ||||||  ||||||||||||||||||||||||| |||| |||||    
T  25140658 gactcccttagaaggaacttcttgcgggattccgcca-tcaaaatccaaaattccatcgtttacaccctttttt 25140586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Original strand, 13509463 - 13509491
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  13509463 atttttcatattctcagaaaaatccgaaa 13509491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 20517624 - 20517561
Alignment:
Q  46 cccctcaaaatccaaaattccatcgtttagacccatttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||| ||| ||| |||||||| || ||||||||||||||||| | ||||||| ||||    
T  20517624 cccctcaaaatctaaatttc-atcgtttaaactcatttttcatattctcatacaaatccggaaaa 20517561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 108
Target Start/End: Complemental strand, 25491156 - 25491128
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaa 108  Q
    |||||||||||||||||||||||||||||    
T  25491156 atttttcatattctcagaaaaatccgaaa 25491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 341
Target Start/End: Complemental strand, 47224563 - 47224535
Alignment:
Q  313 aaacatgaatctggattttaaaatccgga 341  Q
    |||||||||||||||||||||||||||||    
T  47224563 aaacatgaatctggattttaaaatccgga 47224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 53836116 - 53836072
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgttta 74  Q
    |||||||  ||||||| ||||||||||||||||||| ||||||||    
T  53836116 ttcttacgggactccgtccctcaaaatccaaaattctatcgttta 53836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 225 - 399
Target Start/End: Complemental strand, 173989 - 173813
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||| ||||||||||| | ||||||||||||||||||     
T  173989 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggctgattatacataagaattgtccggattataaaatccaaaatagtaaacatgaatcc 173890  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaa 399  Q
    ||||||||||||| | ||||||||| |||| |||| ||| |||||||  || ||||||||| | ||||| |||||||    
T  173889 ggattttaaaatctgaaatgcacaatggcatttttgaaaattttacagggcgcgggagaaggctatagggtgggaaa 173813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 174220 - 174136
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttca 87  Q
    |||||| ||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  174220 aaggaccatgactcctgtagaagggacttcttacgagactccgcccctcaaaattcaaaattccatcgtttagacacatttttca 174136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 225 - 359
Target Start/End: Complemental strand, 3014 - 2880
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||||||| | ||||| ||||||||||||     
T  3014 aaagcaaaactcaaaactgctgaaatgtgagagagtctgatggttgattatacataggaattgtccggattataaaatccaaaatattaaacatgaatcc 2915  T
Q  325 ggattttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||| ||||||||||| |||| ||||    
T  2914 ggattttaaaatctggaatgcacaagggcattttt 2880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 3252 - 3170
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||||| ||||||||||||| ||||||   ||| || ||||||||||||||||||||||||||||||||||||||||    
T  3252 aaggaccatgacccccttagaagggacttcttatgggaccccacccctcaaaatccaaaattccatcgtttagacccattttt 3170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 4319 - 4501
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||||||||  |||||||||||  |||||||||||||||||||     
T  4319 aaagcaaaactcaaaactgctgaaatgcgagagagactgatggctgattatacataagaattgtctggattataaaatctgaaatagtaaacatgaatcg 4418  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||||||| ||||| |||| |||| ||| |||||||  || |||||||||  |||||| || ||||||||||    
T  4419 gaattttaaaatccggaatacacaagggcatttttgaaaattttacagggcgcgggagaaggtcatagggtgagaaaagtaat 4501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 4122 - 4167
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  4122 actccgcccctcaaaatccaaaattccattgtttaaacctattttt 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 4185 - 4214
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  4185 tttttcatattctcagaaaaatccgaaaaa 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Original strand, 102623 - 102805
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| |||||||||| ||||||| |||||   |||||||||||||||||||||  |||||||||||  |||||||||||||||||||     
T  102623 aaagcaaaactcaaaactgctgaaatgcgagagagactgatggctgattatacataagaattgtctggattataaaatctgaaatagtaaacatgaatcg 102722  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||||||| ||||| |||| |||| ||| |||||||  || |||||||||  |||||| || ||||||||||    
T  102723 gaattttaaaatccggaatacacaagggcatttttgaaaattttacagggcgcgggagaaggtcatagggtgagaaaagtaat 102805  T

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Target: scaffold0029; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 102426 - 102471
Alignment:
Q  40 actccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  102426 actccgcccctcaaaatccaaaattccattgtttaaacctattttt 102471  T

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Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 102489 - 102518
Alignment:
Q  81 tttttcatattctcagaaaaatccgaaaaa 110  Q
    ||||||||||||||||||||||||||||||    
T  102489 tttttcatattctcagaaaaatccgaaaaa 102518  T

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Target: scaffold0027 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 225 - 405
Target Start/End: Complemental strand, 141624 - 141442
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatct 324  Q
    |||||||||||||||| ||||||||| ||||||||||||||   | |||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  141624 aaagcaaaactcaaaactgctgaaatatgagagagtctgatggctaattatacataagaattgtccggattataaaatccgaaatagtaaacatgaatcc 141525  T
Q  325 ggattttaaaatccggaatgcacaaaggcaattttaaaatttttaca--gcacgggagaagaccataggatgggaaaagtaat 405  Q
    | ||||||||||||| |||| ||||| ||| ||||  || |||||||  | |||  ||||||||||||  |||||||||||||    
T  141524 gaattttaaaatccgaaatgtacaaaagcatttttggaaattttacagggtacgaaagaagaccatagagtgggaaaagtaat 141442  T

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Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 85
Target Start/End: Complemental strand, 141817 - 141771
Alignment:
Q  39 gactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  141817 gactctgcccctcaaaatccaaaattccatcgtttagacccaatttt 141771  T

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Target: scaffold0027; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 141755 - 141727
Alignment:
Q  82 ttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||    
T  141755 ttttcatattctcagaaaaatccgaaaaa 141727  T

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Target: scaffold0137 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 229 - 359
Target Start/End: Complemental strand, 9126 - 8996
Alignment:
Q  229 caaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggat 328  Q
    |||||||||||| || | |||||||||||||||||||   ||||| |||||||||||||||| ||||||||||| | |||||||||||||||||| ||||    
T  9126 caaaactcaaaactgttaaaatgtgagagagtctgatggctgattttacataagaattgtccggattataaaatccaaaatagtaaacatgaatccggat 9027  T
Q  329 tttaaaatccggaatgcacaaaggcaatttt 359  Q
    ||||||||||||||||||||| |||| ||||    
T  9026 tttaaaatccggaatgcacaagggcattttt 8996  T

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Target: scaffold0137; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 9348 - 9278
Alignment:
Q  11 tgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatt 82  Q
    |||||||||||||||| | |||||||  |||||||||||||||||| |||||| ||||||||||||||||||    
T  9348 tgactcccttagaagg-acttcttacgggactccgcccctcaaaattcaaaataccatcgtttagacccatt 9278  T

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Target: scaffold0010 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 141021 - 141150
Alignment:
Q  243 gctgaaatgtgagagagtctgatatttgattatacataagaattgtccagattataaaattcgaaatagtaaacatgaatctggattttaaaatccggaa 342  Q
    |||| ||||||||||||||||||  |||||||||||  |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  141021 gctggaatgtgagagagtctgatggttgattatacaccagaattgtccggattataaaatccgaaatagtaaacatgaatccggattttaaaatccggaa 141120  T
Q  343 tgcacaaaggcaattttaaaatttttacag 372  Q
    |||||||  ||| |||| ||| ||||||||    
T  141121 tgcacaagagcatttttgaaaattttacag 141150  T

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Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 140786 - 140860
Alignment:
Q  3 aaggactatgactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| ||||||||| || |||||| |||||||  |||| |||||||||||||||||| || ||||||||||||    
T  140786 aaggaccatgactcccataaaagggacttcttacgggacttcgcccctcaaaatccaaagtttcatcgtttagac 140860  T

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Target: scaffold0182 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 23300 - 23358
Alignment:
Q  30 ttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 88  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23300 ttcttacgggactccgcccctcaaaatccaaaattccatcgtttagacccatttttcat 23358  T

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Target: scaffold0564 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 4691 - 4745
Alignment:
Q  23 aagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagac 77  Q
    |||||| |||||||  |||||| ||||||||||||||||||| ||||||||||||    
T  4691 aagggacttcttacgggactccacccctcaaaatccaaaattacatcgtttagac 4745  T

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Target: scaffold0564; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 4774 - 4804
Alignment:
Q  80 atttttcatattctcagaaaaatccgaaaaa 110  Q
    |||||||||||||||||||||||||||||||    
T  4774 atttttcatattctcagaaaaatccgaaaaa 4804  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 205952 - 205887
Alignment:
Q  19 ttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccattttt 85  Q
    |||||| ||| |||||||  |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  205952 ttagaaaggacttcttacgggactccgccc-tcaaaatccaaaattccatcatttagaccctttttt 205887  T

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Target: scaffold0016; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 205748 - 205672
Alignment:
Q  12 gactcccttagaagggatttcttacaagactccgcccctcaaaatccaaaattccatcgtttagacccatttttcata 89  Q
    |||||||||||||| || |||||||  |||||| ||| ||||||||||||||| |||| ||||||| | |||||||||    
T  205748 gactcccttagaagagacttcttacgggactccaccc-tcaaaatccaaaatttcatcatttagactcttttttcata 205672  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 421085 - 421029
Alignment:
Q  225 aaagcaaaactcaaaaatgctgaaatgtgagagagtctgatatttgattatacataa 281  Q
    ||||||||| |||||| | ||||||||||||||| ||||||  ||||||||||||||    
T  421085 aaagcaaaattcaaaactactgaaatgtgagagattctgattgttgattatacataa 421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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