View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2479_low_4 (Length: 638)

Name: NF2479_low_4
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2479_low_4
NF2479_low_4
[»] chr8 (52 HSPs)
chr8 (38-622)||(34701948-34702527)
chr8 (1-44)||(8951427-8951470)
chr8 (1-45)||(18754138-18754182)
chr8 (1-39)||(51094-51132)
chr8 (1-39)||(1774342-1774380)
chr8 (1-39)||(2944271-2944309)
chr8 (1-39)||(8251932-8251970)
chr8 (1-39)||(13153928-13153966)
chr8 (6-40)||(17856516-17856550)
chr8 (1-39)||(28192174-28192212)
chr8 (1-39)||(28572046-28572084)
chr8 (1-39)||(28579639-28579677)
chr8 (1-39)||(34568490-34568528)
chr8 (2-43)||(17069844-17069885)
chr8 (2-43)||(17578388-17578429)
chr8 (2-39)||(32675757-32675794)
chr8 (2-39)||(39029178-39029215)
chr8 (1-41)||(7758908-7758948)
chr8 (3-39)||(13568906-13568942)
chr8 (1-41)||(38878719-38878759)
chr8 (1-32)||(8797296-8797327)
chr8 (4-39)||(19176136-19176171)
chr8 (1-40)||(40741264-40741303)
chr8 (1-39)||(2152239-2152277)
chr8 (1-39)||(5162304-5162342)
chr8 (1-39)||(5593421-5593459)
chr8 (1-39)||(8948350-8948388)
chr8 (1-39)||(9035538-9035576)
chr8 (1-39)||(11798605-11798643)
chr8 (6-40)||(11798869-11798903)
chr8 (2-52)||(12802598-12802648)
chr8 (5-39)||(16998996-16999030)
chr8 (5-39)||(17856779-17856813)
chr8 (1-39)||(18455720-18455758)
chr8 (1-39)||(18641379-18641417)
chr8 (5-39)||(26016569-26016603)
chr8 (1-39)||(29598224-29598262)
chr8 (1-39)||(36177102-36177140)
chr8 (1-39)||(38781140-38781178)
chr8 (1-39)||(40529307-40529345)
chr8 (5-39)||(42885054-42885088)
chr8 (1-39)||(43654202-43654240)
chr8 (1-39)||(44251120-44251158)
chr8 (6-39)||(13154192-13154225)
chr8 (6-39)||(29279460-29279493)
chr8 (6-39)||(40530410-40530443)
chr8 (6-39)||(43653943-43653976)
chr8 (6-39)||(44250859-44250892)
chr8 (4-44)||(6050557-6050597)
chr8 (1-41)||(14699450-14699490)
chr8 (1-33)||(33865540-33865572)
chr8 (3-39)||(44502620-44502656)
[»] scaffold0308 (2 HSPs)
scaffold0308 (1-40)||(14347-14386)
scaffold0308 (7-40)||(5292-5325)
[»] chr7 (40 HSPs)
chr7 (1-39)||(41003153-41003191)
chr7 (1-41)||(32872374-32872414)
chr7 (1-40)||(21295150-21295189)
chr7 (1-40)||(28060716-28060755)
chr7 (1-40)||(41026095-41026134)
chr7 (1-40)||(41252360-41252399)
chr7 (1-40)||(48521028-48521067)
chr7 (1-39)||(19920563-19920601)
chr7 (1-39)||(26255096-26255134)
chr7 (1-39)||(29286036-29286074)
chr7 (1-39)||(32814433-32814471)
chr7 (1-39)||(33858865-33858903)
chr7 (1-39)||(36698130-36698168)
chr7 (1-39)||(38858298-38858336)
chr7 (1-39)||(39197718-39197756)
chr7 (2-39)||(39871613-39871650)
chr7 (1-45)||(2290015-2290059)
chr7 (3-39)||(40300230-40300266)
chr7 (1-40)||(7449269-7449308)
chr7 (1-40)||(7703819-7703858)
chr7 (5-40)||(35569654-35569689)
chr7 (1-39)||(25247689-25247727)
chr7 (1-39)||(25950831-25950869)
chr7 (1-39)||(29177251-29177289)
chr7 (1-39)||(31457997-31458035)
chr7 (1-39)||(34012516-34012554)
chr7 (1-39)||(34979076-34979114)
chr7 (1-39)||(36646636-36646674)
chr7 (1-39)||(36711297-36711335)
chr7 (1-39)||(44547426-44547464)
chr7 (1-39)||(44719127-44719165)
chr7 (2-39)||(12631816-12631853)
chr7 (6-39)||(20075111-20075144)
chr7 (6-39)||(28060981-28061014)
chr7 (1-34)||(31769331-31769364)
chr7 (6-39)||(38428411-38428444)
chr7 (5-41)||(1275736-1275772)
chr7 (1-33)||(9140532-9140564)
chr7 (3-31)||(24211149-24211177)
chr7 (3-39)||(33381574-33381610)
[»] chr4 (63 HSPs)
chr4 (1-39)||(36391854-36391892)
chr4 (1-42)||(9328239-9328280)
chr4 (1-41)||(5375556-5375596)
chr4 (1-41)||(44294787-44294827)
chr4 (1-40)||(26866862-26866901)
chr4 (1-36)||(37352547-37352582)
chr4 (1-36)||(37357446-37357481)
chr4 (1-48)||(47228727-47228774)
chr4 (1-39)||(4035825-4035863)
chr4 (1-39)||(30771528-30771566)
chr4 (1-39)||(32032992-32033030)
chr4 (2-40)||(33413517-33413555)
chr4 (1-39)||(34273218-34273256)
chr4 (1-39)||(45742805-45742843)
chr4 (1-39)||(47806860-47806898)
chr4 (1-39)||(52977982-52978020)
chr4 (2-39)||(5743659-5743696)
chr4 (3-39)||(375424-375460)
chr4 (3-39)||(26626003-26626039)
chr4 (1-40)||(1859143-1859182)
chr4 (6-41)||(4036089-4036124)
chr4 (1-40)||(6753524-6753563)
chr4 (1-48)||(17610019-17610066)
chr4 (1-40)||(31937075-31937114)
chr4 (1-44)||(46949987-46950030)
chr4 (1-40)||(53629791-53629830)
chr4 (1-39)||(4415965-4416003)
chr4 (1-39)||(6807429-6807467)
chr4 (1-39)||(15241480-15241518)
chr4 (5-39)||(20391440-20391474)
chr4 (1-39)||(20455180-20455218)
chr4 (1-39)||(24754078-24754116)
chr4 (2-40)||(25124246-25124284)
chr4 (1-39)||(25708677-25708715)
chr4 (5-39)||(35675923-35675957)
chr4 (5-39)||(37776740-37776774)
chr4 (1-39)||(43387992-43388030)
chr4 (1-39)||(45097164-45097202)
chr4 (1-39)||(48030313-48030351)
chr4 (1-39)||(49373692-49373730)
chr4 (1-39)||(49793091-49793129)
chr4 (1-39)||(53277184-53277222)
chr4 (1-39)||(56432518-56432556)
chr4 (2-39)||(2615945-2615982)
chr4 (6-39)||(4549629-4549662)
chr4 (1-34)||(16545982-16546015)
chr4 (6-39)||(20747434-20747467)
chr4 (5-42)||(26625740-26625777)
chr4 (2-39)||(28501386-28501423)
chr4 (6-39)||(29014064-29014097)
chr4 (2-39)||(29520164-29520201)
chr4 (1-34)||(41620519-41620552)
chr4 (2-39)||(52870644-52870681)
chr4 (2-39)||(53564356-53564393)
chr4 (6-39)||(55631999-55632032)
chr4 (1-33)||(6083290-6083322)
chr4 (3-39)||(24073127-24073163)
chr4 (8-40)||(25708419-25708451)
chr4 (3-39)||(32899219-32899255)
chr4 (1-41)||(39144402-39144442)
chr4 (1-41)||(50424853-50424893)
chr4 (1-37)||(54676549-54676585)
chr4 (3-39)||(55563128-55563164)
[»] chr2 (47 HSPs)
chr2 (1-39)||(8841656-8841694)
chr2 (2-39)||(23788969-23789006)
chr2 (1-40)||(36131027-36131066)
chr2 (1-39)||(2438225-2438263)
chr2 (1-39)||(7491844-7491882)
chr2 (1-39)||(8716891-8716929)
chr2 (1-39)||(11201683-11201721)
chr2 (1-39)||(15404706-15404744)
chr2 (1-39)||(16669626-16669664)
chr2 (1-39)||(17408293-17408331)
chr2 (1-39)||(20252210-20252248)
chr2 (1-39)||(34062664-34062702)
chr2 (1-39)||(34883847-34883885)
chr2 (1-39)||(41450516-41450554)
chr2 (1-39)||(44573881-44573919)
chr2 (2-39)||(27560206-27560243)
chr2 (2-39)||(40607702-40607739)
chr2 (1-32)||(1859554-1859585)
chr2 (2-41)||(2060314-2060353)
chr2 (1-39)||(4711728-4711766)
chr2 (1-39)||(5664638-5664676)
chr2 (6-40)||(7492108-7492142)
chr2 (1-39)||(8912873-8912911)
chr2 (5-39)||(9701070-9701104)
chr2 (1-39)||(12360457-12360495)
chr2 (1-39)||(15228148-15228186)
chr2 (1-39)||(16805790-16805828)
chr2 (1-39)||(16845071-16845109)
chr2 (1-39)||(22897391-22897429)
chr2 (1-39)||(25624733-25624771)
chr2 (1-39)||(26322292-26322330)
chr2 (2-40)||(28566150-28566188)
chr2 (1-39)||(34113531-34113569)
chr2 (5-39)||(34113789-34113823)
chr2 (1-39)||(40680727-40680765)
chr2 (1-39)||(45628878-45628916)
chr2 (6-39)||(2438489-2438522)
chr2 (2-39)||(7116299-7116336)
chr2 (1-50)||(8990193-8990242)
chr2 (6-39)||(16108215-16108248)
chr2 (6-39)||(22897655-22897688)
chr2 (5-46)||(32120937-32120978)
chr2 (6-39)||(39833739-39833772)
chr2 (6-39)||(45474351-45474384)
chr2 (7-39)||(22182929-22182961)
chr2 (1-41)||(26334844-26334884)
chr2 (5-37)||(42629373-42629405)
[»] chr3 (75 HSPs)
chr3 (2-39)||(46878439-46878476)
chr3 (1-40)||(9499496-9499535)
chr3 (5-40)||(54604591-54604626)
chr3 (1-39)||(6784463-6784501)
chr3 (1-39)||(10220933-10220971)
chr3 (1-39)||(12050391-12050429)
chr3 (1-39)||(21756486-21756524)
chr3 (1-39)||(22103928-22103966)
chr3 (1-39)||(25149121-25149159)
chr3 (1-39)||(26593764-26593802)
chr3 (1-39)||(32467425-32467463)
chr3 (1-39)||(35165961-35165999)
chr3 (1-39)||(35868082-35868120)
chr3 (1-39)||(37728713-37728751)
chr3 (1-39)||(43868103-43868141)
chr3 (1-39)||(44543782-44543820)
chr3 (1-39)||(45252773-45252811)
chr3 (1-39)||(51284061-51284099)
chr3 (2-39)||(7181350-7181387)
chr3 (1-34)||(8546909-8546942)
chr3 (2-39)||(14428610-14428647)
chr3 (6-51)||(20862461-20862506)
chr3 (2-39)||(46049986-46050023)
chr3 (1-42)||(54782916-54782957)
chr3 (3-39)||(4024052-4024088)
chr3 (1-41)||(12683181-12683221)
chr3 (3-39)||(29454787-29454823)
chr3 (1-41)||(47066932-47066972)
chr3 (2-33)||(22527621-22527652)
chr3 (6-41)||(31531415-31531450)
chr3 (6-40)||(4024315-4024349)
chr3 (1-39)||(4759350-4759388)
chr3 (1-39)||(7051719-7051757)
chr3 (1-39)||(8321925-8321963)
chr3 (1-39)||(20862196-20862234)
chr3 (1-39)||(22832606-22832644)
chr3 (1-39)||(23700784-23700822)
chr3 (1-39)||(23719239-23719277)
chr3 (1-39)||(23737695-23737733)
chr3 (1-39)||(24087334-24087372)
chr3 (1-39)||(26058546-26058584)
chr3 (1-39)||(26221288-26221326)
chr3 (1-39)||(26306606-26306644)
chr3 (5-39)||(27687986-27688020)
chr3 (2-40)||(29719710-29719748)
chr3 (1-39)||(32963104-32963142)
chr3 (5-39)||(33360885-33360919)
chr3 (1-39)||(33868448-33868486)
chr3 (1-39)||(36098966-36099004)
chr3 (6-40)||(37728977-37729011)
chr3 (1-39)||(41392879-41392917)
chr3 (1-39)||(43701178-43701216)
chr3 (1-39)||(45324086-45324124)
chr3 (1-39)||(46845491-46845529)
chr3 (1-39)||(50726782-50726820)
chr3 (1-39)||(50786028-50786066)
chr3 (1-39)||(53361854-53361892)
chr3 (6-39)||(9779979-9780012)
chr3 (6-39)||(14428873-14428906)
chr3 (5-42)||(15996776-15996813)
chr3 (6-39)||(16434977-16435010)
chr3 (1-34)||(20918224-20918257)
chr3 (1-34)||(20927186-20927219)
chr3 (6-39)||(26306354-26306387)
chr3 (6-39)||(26806115-26806148)
chr3 (6-39)||(33868712-33868745)
chr3 (6-39)||(36005768-36005801)
chr3 (1-34)||(46703032-46703065)
chr3 (6-39)||(50647684-50647717)
chr3 (2-39)||(50647944-50647981)
chr3 (6-39)||(52058985-52059018)
chr3 (1-42)||(53164160-53164201)
chr3 (1-33)||(1572337-1572369)
chr3 (5-33)||(31186764-31186792)
chr3 (2-34)||(31397771-31397803)
[»] chr6 (31 HSPs)
chr6 (3-39)||(13648130-13648166)
chr6 (1-44)||(231104-231147)
chr6 (1-39)||(4844400-4844438)
chr6 (1-39)||(8743188-8743226)
chr6 (1-39)||(30248647-30248685)
chr6 (1-39)||(34301831-34301869)
chr6 (5-40)||(9038641-9038676)
chr6 (4-39)||(23398141-23398176)
chr6 (1-39)||(287413-287451)
chr6 (1-39)||(402620-402658)
chr6 (1-39)||(925932-925970)
chr6 (1-39)||(2090658-2090696)
chr6 (1-39)||(5457412-5457450)
chr6 (1-39)||(9388790-9388828)
chr6 (1-39)||(10195992-10196030)
chr6 (5-39)||(11847835-11847869)
chr6 (1-39)||(13901641-13901679)
chr6 (1-39)||(15498629-15498667)
chr6 (1-39)||(19097800-19097838)
chr6 (1-39)||(25045642-25045680)
chr6 (1-39)||(33487833-33487871)
chr6 (1-39)||(34915542-34915580)
chr6 (6-39)||(9388529-9388562)
chr6 (2-39)||(11161851-11161888)
chr6 (7-48)||(12144043-12144084)
chr6 (2-39)||(13011120-13011157)
chr6 (2-39)||(23604460-23604497)
chr6 (2-39)||(25197152-25197189)
chr6 (6-39)||(34741730-34741763)
chr6 (5-41)||(1730104-1730140)
chr6 (2-34)||(17227527-17227559)
[»] scaffold0339 (1 HSPs)
scaffold0339 (1-48)||(7139-7186)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-48)||(12056-12103)
[»] chr5 (39 HSPs)
chr5 (1-40)||(9828392-9828431)
chr5 (1-48)||(26894872-26894919)
chr5 (1-39)||(1265949-1265987)
chr5 (2-48)||(3028004-3028050)
chr5 (1-39)||(5527974-5528012)
chr5 (1-39)||(6673227-6673265)
chr5 (1-39)||(14913648-14913686)
chr5 (1-39)||(16127259-16127297)
chr5 (1-39)||(22527692-22527730)
chr5 (1-39)||(40004408-40004446)
chr5 (3-39)||(7951562-7951598)
chr5 (3-39)||(34662204-34662240)
chr5 (5-48)||(4976293-4976336)
chr5 (1-40)||(13862994-13863033)
chr5 (1-36)||(42561348-42561383)
chr5 (5-39)||(9020694-9020728)
chr5 (6-40)||(9828657-9828691)
chr5 (5-39)||(10734526-10734560)
chr5 (1-39)||(15190814-15190852)
chr5 (1-39)||(15521941-15521979)
chr5 (1-39)||(16153254-16153292)
chr5 (1-39)||(16440931-16440969)
chr5 (1-39)||(23286473-23286511)
chr5 (1-39)||(25601059-25601097)
chr5 (1-39)||(32147294-32147332)
chr5 (1-39)||(41384171-41384209)
chr5 (1-39)||(43060410-43060448)
chr5 (6-39)||(186362-186395)
chr5 (2-39)||(3497800-3497837)
chr5 (2-39)||(8949812-8949849)
chr5 (2-39)||(23260138-23260175)
chr5 (1-34)||(24308139-24308172)
chr5 (1-34)||(24365151-24365184)
chr5 (1-34)||(39984775-39984808)
chr5 (1-33)||(14789558-14789590)
chr5 (2-34)||(18251019-18251051)
chr5 (3-39)||(19571940-19571976)
chr5 (1-33)||(27873344-27873376)
chr5 (1-33)||(32478144-32478176)
[»] chr1 (47 HSPs)
chr1 (1-40)||(1039380-1039419)
chr1 (1-40)||(1046286-1046325)
chr1 (1-39)||(943636-943674)
chr1 (1-39)||(4102713-4102751)
chr1 (1-39)||(11741397-11741435)
chr1 (1-39)||(15811231-15811269)
chr1 (1-39)||(23541979-23542017)
chr1 (1-39)||(36694854-36694892)
chr1 (1-39)||(36710955-36710993)
chr1 (1-39)||(37951948-37951986)
chr1 (1-39)||(38261340-38261378)
chr1 (1-39)||(39363193-39363231)
chr1 (1-39)||(39497433-39497471)
chr1 (1-39)||(44649629-44649667)
chr1 (1-39)||(45039412-45039450)
chr1 (1-39)||(46075866-46075904)
chr1 (1-39)||(49907021-49907059)
chr1 (1-39)||(52431173-52431211)
chr1 (1-38)||(30289861-30289898)
chr1 (2-39)||(30290265-30290302)
chr1 (1-37)||(32169953-32169989)
chr1 (1-36)||(13343776-13343811)
chr1 (6-41)||(23542243-23542278)
chr1 (1-48)||(39750380-39750427)
chr1 (1-39)||(1427199-1427237)
chr1 (1-39)||(7763748-7763786)
chr1 (1-39)||(7783991-7784029)
chr1 (1-39)||(14171542-14171580)
chr1 (5-39)||(23530542-23530576)
chr1 (1-39)||(25509209-25509247)
chr1 (1-39)||(27037269-27037307)
chr1 (5-39)||(38920239-38920273)
chr1 (6-44)||(39750116-39750154)
chr1 (1-39)||(41855472-41855510)
chr1 (1-39)||(43456620-43456658)
chr1 (1-39)||(45335885-45335923)
chr1 (1-39)||(50246928-50246966)
chr1 (1-39)||(52601991-52602029)
chr1 (6-39)||(1047992-1048025)
chr1 (6-39)||(9202245-9202278)
chr1 (2-39)||(16456636-16456673)
chr1 (6-39)||(39362934-39362967)
chr1 (6-39)||(39497697-39497730)
chr1 (2-39)||(42276161-42276198)
chr1 (6-39)||(44646535-44646568)
chr1 (6-39)||(44649893-44649926)
chr1 (5-41)||(25227302-25227338)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-39)||(3781-3819)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-39)||(51681-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-39)||(47640-47678)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-39)||(259121-259159)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-44)||(355334-355373)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-39)||(5151-5189)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-39)||(10181-10219)
[»] scaffold0240 (1 HSPs)
scaffold0240 (1-39)||(18497-18535)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-39)||(3438-3476)
[»] scaffold0107 (1 HSPs)
scaffold0107 (1-39)||(48654-48692)
[»] scaffold0025 (2 HSPs)
scaffold0025 (1-39)||(65636-65674)
scaffold0025 (6-39)||(65378-65411)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-32)||(24224-24253)


Alignment Details
Target: chr8 (Bit Score: 553; Significance: 0; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 553; E-Value: 0
Query Start/End: Original strand, 38 - 622
Target Start/End: Original strand, 34701948 - 34702527
Alignment:
Q  38 tacaaaataaattgatgaaaaaaggtatgtctgagtgagttagtcaaaaagtcaaataggcaaaattgggtgatggctagctacctaaacgcactaatgc 137  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34701948 tacaaaataaattgatgaaaaaaggtatgtgtgagtgagttagtcaaaaagtcaaataggcaaaattgggtgatggctagctacctaaacgcactaatgc 34702047  T
Q  138 ttttctttttaactgtcatcacatcattgatggtcaatagagaataatttgataatcgattaatttttgtaaaagaatgaaattcataaaggtgaatgat 237  Q
    ||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34702048 ttttctttttaactgtcatc-----attgatggtcaatagagaataatttgataatcgattaatttttgtaaaagaatgaaaatcataaaggtgaatgat 34702142  T
Q  238 aatgaagtggtaaaaagcatttcaatttggatttctctttggtactattaattcggaggcgtcaacaaattatttccacaagtataagcaagagtttgaa 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34702143 aatgaagtggtaaaaagcatttcaatttggatttctctttggtactattaattcggaggcgtcaacaaattatttccacaagtataagcaagagtttgaa 34702242  T
Q  338 gttcaaagtgagaaaccaatgtgatgtgttgtaagataaattgcttattgccgacaattcttcagacaccctttacgtgaatggtaagtgaagttaacct 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34702243 gttcaaagtgagaaaccaatgtgatgtgttgtaagataaattgcttattgccggcaattcttcagacaccctttacgtgaatggtaagtgaagttaacct 34702342  T
Q  438 cagttcaataatcttatcaagcaagtgttaacagctgtttaatttacttttaatttgtggttcacattcatacttaacgtaagaaaacttattaggccgg 537  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34702343 cagttcaataatcttatcaagcaagtgttaacagctgtttaatttacttttaatttgtggttcacattcatacttaacgtaagaaaacttattaggccgg 34702442  T
Q  538 taatcacaataggtttactttcaattttctttttggttgtttccatttgtctttgactgaactgatccagataaagtgtatatac 622  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34702443 taatcacaataggtttactttcaattttctttttggttgtttccatttgtctttgactgaactgatccagataaagtgtatatac 34702527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8951427 - 8951470
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  8951427 attctcaaaagggtcttataattagggacggagggagtacaaaa 8951470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18754182 - 18754138
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaat 45  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  18754182 attctcaaaagggtcttataattagggacggagggagtataaaat 18754138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51094 - 51132
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51094 attctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1774380 - 1774342
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1774380 attctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2944271 - 2944309
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  2944271 attctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8251932 - 8251970
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8251932 attctcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13153966 - 13153928
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13153966 attctcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 17856550 - 17856516
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||||||||||||||    
T  17856550 caaaagggtcttataattaaggacggagggagtac 17856516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28192174 - 28192212
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28192174 attctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28572084 - 28572046
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28572084 attctcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28579677 - 28579639
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28579677 attctcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34568528 - 34568490
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34568528 attctcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 17069844 - 17069885
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtacaaa 43  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  17069844 ttctcaaaagggtcttataattagggacggaggtagtacaaa 17069885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 17578429 - 17578388
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtacaaa 43  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  17578429 ttctcaaaagggtcttataattagggacggaggtagtacaaa 17578388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 32675757 - 32675794
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32675757 ttctcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 39029215 - 39029178
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39029215 ttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7758908 - 7758948
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  7758908 attctcaaaagtgtcttataattagggacggagggagtaca 7758948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 13568906 - 13568942
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13568906 tctcaaaagggtcttataattaaggacggaggtagta 13568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38878759 - 38878719
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  38878759 attctcaaaagggtcttataattagagacggagggagtaca 38878719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8797296 - 8797327
Alignment:
Q  1 attctcaaaagggtcttataattaaggacgga 32  Q
    ||||||||||||||||||||||||||||||||    
T  8797296 attctcaaaagggtcttataattaaggacgga 8797327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 19176171 - 19176136
Alignment:
Q  4 ctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||||||||| ||||    
T  19176171 ctcaaaagggtcttataattaaggacggaggtagta 19176136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 40741303 - 40741264
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  40741303 attctcaaaagggtattataattagggacggagggagtac 40741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2152239 - 2152277
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  2152239 attctcaaaagggtcttataattagggacggaggtagta 2152277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5162342 - 5162304
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  5162342 attctcaaaagggtcttataattagggacggaggtagta 5162304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5593459 - 5593421
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  5593459 attctcaaaagggtcttataattagggacggaaggagta 5593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8948350 - 8948388
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  8948350 attctcaaaagggtcttataattagggacggatggagta 8948388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9035538 - 9035576
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  9035538 attctcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11798643 - 11798605
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  11798643 attctcaaaagggtcttataattagggacagagggagta 11798605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 11798869 - 11798903
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||| |||||||||||||||    
T  11798869 caaaagggtcttataattagggacggagggagtac 11798903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 12802648 - 12802598
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtacaaaataaattga 52  Q
    ||||||||||||||||||||||| ||||||||| |||| ||| || |||||    
T  12802648 ttctcaaaagggtcttataattagggacggaggtagtataaattacattga 12802598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 16999030 - 16998996
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  16999030 tcaaaagggtcttataattatggacggagggagta 16998996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 17856779 - 17856813
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagta 17856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18455758 - 18455720
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  18455758 attcttaaaagggtcttataattagggacggagggagta 18455720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18641379 - 18641417
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  18641379 attctcaaaagggtcttataattagggacggaggtagta 18641417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 26016603 - 26016569
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  26016603 tcaaaagggtcttataattagggacggagggagta 26016569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29598262 - 29598224
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  29598262 attctcaaaagggtcttataattagagacggagggagta 29598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36177102 - 36177140
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  36177102 attctcaaaagagtcttataattagggacggagggagta 36177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38781140 - 38781178
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  38781140 attctcaaaagggtcttataattatggacggaggtagta 38781178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40529345 - 40529307
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  40529345 attctcaaaaggatcttataattagggacggagggagta 40529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 42885088 - 42885054
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagta 42885054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43654202 - 43654240
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  43654202 attctcaaaagagtcttataattagggacggagggagta 43654240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44251120 - 44251158
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  44251120 attctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 13154192 - 13154225
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagta 13154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 29279460 - 29279493
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  29279460 caaaagggtcttataattagggacggagggagta 29279493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 40530410 - 40530443
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  40530410 caaaagggtcttataattagggacggagggagta 40530443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 43653976 - 43653943
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  43653976 caaaagggtcttataattagggacggagggagta 43653943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 44250892 - 44250859
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  44250892 caaaagggtcttataattagggacggagggagta 44250859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6050557 - 6050597
Alignment:
Q  4 ctcaaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    ||||||||||||||||||||| ||||||||| |||| ||||    
T  6050557 ctcaaaagggtcttataattagggacggaggtagtaaaaaa 6050597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14699490 - 14699450
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||| ||||||||||| ||||||||| ||||||    
T  14699490 attctcaaaaggatcttataattagggacggaggaagtaca 14699450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33865540 - 33865572
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  33865540 attctcaaaagggtcttataattagggacggag 33865572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 44502656 - 44502620
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagta 44502620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14347 - 14386
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14347 attctcaaaagggtcttataattaaggacggagggagtac 14386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 5292 - 5325
Alignment:
Q  7 aaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||| ||||||||||||||    
T  5292 aaaagggtcttataattaaagacggagggagtac 5325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41003153 - 41003191
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41003153 attctcaaaagggtcttataattaaggacggagggagta 41003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32872374 - 32872414
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  32872374 attctcaaaagggtcttataattagggacggagggagtaca 32872414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21295189 - 21295150
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  21295189 attctcaaaagggtcttataattagggacggagggagtac 21295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 28060755 - 28060716
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  28060755 attctcaaaagggtcttataattaaggacggatggagtac 28060716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41026095 - 41026134
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41026095 attctcaaaagggtcttataattagggacggagggagtac 41026134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41252360 - 41252399
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41252360 attctcaaaagggtcttataattagggacggagggagtac 41252399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 48521067 - 48521028
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  48521067 attctcaaaagggtcttataattagggacggagggagtac 48521028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19920601 - 19920563
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19920601 attctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26255134 - 26255096
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26255134 attctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29286036 - 29286074
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29286036 attctcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32814471 - 32814433
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32814471 attctcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33858865 - 33858903
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33858865 attctcaaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36698130 - 36698168
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36698130 attctcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38858336 - 38858298
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38858336 attctcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39197756 - 39197718
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  39197756 attctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 39871613 - 39871650
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2290015 - 2290059
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaat 45  Q
    |||||||||||||||||||||||| ||||||||| |||| |||||    
T  2290015 attctcaaaagggtcttataattagggacggaggtagtataaaat 2290059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 40300266 - 40300230
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 7449308 - 7449269
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  7449308 attctcaaaatggtcttataattagggacggagggagtac 7449269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7703819 - 7703858
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  7703819 attctcaaaagaatcttataattaaggacggagggagtac 7703858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 35569654 - 35569689
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||||||||| |||||    
T  35569654 tcaaaagggtcttataattaaggacggaggtagtac 35569689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25247689 - 25247727
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  25247689 attctcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25950869 - 25950831
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  25950869 attctcaaaaaggtcttataattaaggacggaggtagta 25950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29177251 - 29177289
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  29177251 attctcaaaaggatcttataattagggacggagggagta 29177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31458035 - 31457997
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  31458035 attctcaaaagggtcttataattagggacggaggaagta 31457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34012516 - 34012554
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  34012516 attctcaaaagggtcttataattagggacggaggtagta 34012554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34979076 - 34979114
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  34979076 attctcaaaagagtcttataattagggacggagggagta 34979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36646636 - 36646674
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  36646636 attctcaaaagggtcttctaattagggacggagggagta 36646674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36711297 - 36711335
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  36711297 attctcaaaagggtcttataattaggaacggagggagta 36711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44547464 - 44547426
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  44547464 attctcaaaaaggtcttataattagggacggagggagta 44547426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44719165 - 44719127
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  44719165 attctcaaaatggtcttataattaaggacggaggtagta 44719127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 12631816 - 12631853
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  12631816 ttctcaaaatggtcttataattaaggacggaggtagta 12631853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 20075111 - 20075144
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  20075111 caaaagggtcttataattagggacggagggagta 20075144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 28060981 - 28061014
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  28060981 caaaagggtcttataattagggacggagggagta 28061014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31769331 - 31769364
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  31769331 attctcaaaagggtcttataattagggacggagg 31769364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 38428411 - 38428444
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  38428411 caaaagggtcttataattagggacggagggagta 38428444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 1275736 - 1275772
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  1275736 tcaaaagggtcttataattagggatggagggagtaca 1275772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9140532 - 9140564
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  9140532 attctcaaaagggtcttataattagggacggag 9140564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 24211149 - 24211177
Alignment:
Q  3 tctcaaaagggtcttataattaaggacgg 31  Q
    |||||||||||||||||||||||||||||    
T  24211149 tctcaaaagggtcttataattaaggacgg 24211177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 33381574 - 33381610
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  33381574 tctcaaaagggtcttataattagggacggaggtagta 33381610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36391892 - 36391854
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36391892 attctcaaaagggtcttataattaaggacggagggagta 36391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9328239 - 9328280
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaa 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  9328239 attctcaaaagggtcttataattagggacggagggagtacaa 9328280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5375556 - 5375596
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  5375556 attctcaaaagggtcttataattagggacggagggagtaca 5375596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44294827 - 44294787
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  44294827 attctcaaaagggtcttataattagggacggagggagtaca 44294787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 26866862 - 26866901
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  26866862 attctcaaaagggtcttataattaaggacggaggtagtac 26866901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 37352582 - 37352547
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggaggga 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  37352582 attctcaaaagggtcttataattaaggacggaggga 37352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 37357481 - 37357446
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggaggga 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  37357481 attctcaaaagggtcttataattaaggacggaggga 37357446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47228727 - 47228774
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  47228727 attctcaaaagggtcttataattagggacggaggaagtaaaaaataaa 47228774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4035863 - 4035825
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4035863 attctcaaaagggtcttataattagggacggagggagta 4035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30771566 - 30771528
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30771566 attctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32032992 - 32033030
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32032992 attctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 33413555 - 33413517
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagtac 33413517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34273218 - 34273256
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34273218 attctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45742805 - 45742843
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45742805 attctcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47806898 - 47806860
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47806898 attctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52978020 - 52977982
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  52978020 attctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 5743659 - 5743696
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5743659 ttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 375460 - 375424
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||| ||||    
T  375460 tctcaaaagggtcttataattaaggacggaggtagta 375424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 26626003 - 26626039
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1859182 - 1859143
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  1859182 attctcaaaaaggtcttataattagggacggagggagtac 1859143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 4036089 - 4036124
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4036089 caaaagggtcttataattagggacggagggagtaca 4036124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6753563 - 6753524
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  6753563 attctcaaaaggatcttataattagggacggagggagtac 6753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17610019 - 17610066
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||| ||||||||||| ||||||||||||||  |||||||    
T  17610019 attctcaaaaggatcttataattagggacggagggagtattaaataaa 17610066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31937114 - 31937075
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| ||||||||| |||||    
T  31937114 attctcaaaagggtcttataattagggacggaggtagtac 31937075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46950030 - 46949987
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||    
T  46950030 attctcaaaagggtcttataattagggacggaggtagtataaaa 46949987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 53629830 - 53629791
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  53629830 attctcaaaagggtcttataattagggatggagggagtac 53629791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4416003 - 4415965
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  4416003 attctcaaaagggtcttataattagggacggaggtagta 4415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6807467 - 6807429
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  6807467 attctcaaaagggtcttataattagggacagagggagta 6807429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15241518 - 15241480
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  15241518 attctcaaaagagtcttataattagggacggagggagta 15241480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 20391440 - 20391474
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  20391440 tcaaaagggtcttataattagggacggagggagta 20391474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20455180 - 20455218
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  20455180 attctcaaaagggtcttataattagggacggaggtagta 20455218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24754116 - 24754078
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  24754116 attctcaaaaggatcttataattagggacggagggagta 24754078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 25124246 - 25124284
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  25124246 ttctcaaaagggtcttataattagggacggaggtagtac 25124284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25708677 - 25708715
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  25708677 attctcaaaaaggtcttataattagggacggagggagta 25708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 35675923 - 35675957
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagta 35675957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 37776740 - 37776774
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  37776740 tcaaaagggtcttataattaaggacggaggtagta 37776774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43387992 - 43388030
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  43387992 attctcaaaagggtcttataattagggacggaggaagta 43388030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45097164 - 45097202
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  45097164 attctcaaaagggtcttataattagggacggatggagta 45097202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48030351 - 48030313
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  48030351 attctcaaaagggtcttataattagggatggagggagta 48030313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49373692 - 49373730
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  49373692 attctcaaaagggtcttataattagggacggaggtagta 49373730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49793129 - 49793091
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  49793129 attctcaaaagggtcttataattagggacggaggtagta 49793091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 53277184 - 53277222
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  53277184 attcttaaaagggtcttataattagggacggagggagta 53277222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 56432556 - 56432518
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  56432556 attctcaaaagggtcttataattagggacggaggtagta 56432518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 2615945 - 2615982
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  2615945 ttctcaaaagggtcttatgattagggacggagggagta 2615982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 4549662 - 4549629
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  4549662 caaaagggtcttataattagggacggagggagta 4549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16545982 - 16546015
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||| |||||||||||||||||||||    
T  16545982 attctcaaaaggatcttataattaaggacggagg 16546015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 20747434 - 20747467
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  20747434 caaaagggtcttataattagggacggagggagta 20747467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 26625777 - 26625740
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtacaa 42  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  26625777 tcaaaagggtcctataattagggacggagggagtacaa 26625740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 28501386 - 28501423
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  28501386 ttctcaaaagggtcttataattagggacggaggtagta 28501423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 29014097 - 29014064
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  29014097 caaaagggtcttataattagggacggagggagta 29014064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 29520164 - 29520201
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  29520164 ttctcaaaagggtcttataattagggacggaggtagta 29520201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 41620552 - 41620519
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  41620552 attctcaaaagggtcttataattagggacggagg 41620519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 52870681 - 52870644
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||  |||||||||||||    
T  52870681 ttctcaaaagggtcttataattagagacggagggagta 52870644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 53564356 - 53564393
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  53564356 ttctcaaaagggtcttataattagggacggaggtagta 53564393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 55632032 - 55631999
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  55632032 caaaagggtcttataattagggacggagggagta 55631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 6083322 - 6083290
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||| ||||||||||||||||||||||    
T  6083322 attctcaaaaaggtcttataattaaggacggag 6083290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 24073127 - 24073163
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  24073127 tctcaaaaaggtcttataattaaggacggaggtagta 24073163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 25708451 - 25708419
Alignment:
Q  8 aaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||| |||||||||||||||    
T  25708451 aaagggtcttataattagggacggagggagtac 25708419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 32899219 - 32899255
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  32899219 tctcaaaagggtcttataattagggacggaggtagta 32899255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39144442 - 39144402
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  39144442 attcttaaaaggatcttataattagggacggagggagtaca 39144402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50424853 - 50424893
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||||||||  |||||||||| ||||    
T  50424853 attctcaaaagggtcttataattagagacggagggaataca 50424893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54676585 - 54676549
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggag 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  54676585 attctcaaaaaggtcttataattagggacggagggag 54676549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 55563128 - 55563164
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  55563128 tctcaaaagggtcttataattagggacggaggtagta 55563164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8841656 - 8841694
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8841656 attctcaaaagggtcttataattaaggacggagggagta 8841694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 23789006 - 23788969
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23789006 ttctcaaaagggtcttataattaaggacggagggagta 23788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 36131027 - 36131066
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36131027 attctcaaaagggtcttataattagggacggagggagtac 36131066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2438263 - 2438225
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  2438263 attctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7491882 - 7491844
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7491882 attctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8716891 - 8716929
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8716891 attctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11201721 - 11201683
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11201721 attctcaaaagggtcttataattagggacggagggagta 11201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15404706 - 15404744
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  15404706 attctcaaaagggtcttacaattaaggacggagggagta 15404744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16669664 - 16669626
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  16669664 attctcaaaagggtcttataattaagaacggagggagta 16669626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17408293 - 17408331
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17408293 attctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20252248 - 20252210
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  20252248 attctcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34062664 - 34062702
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34062664 attctcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34883847 - 34883885
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34883847 attctcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41450554 - 41450516
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41450554 attctcaaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44573881 - 44573919
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  44573881 attctcaaaagggtcttataattaaggacggaggtagta 44573919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 27560243 - 27560206
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  27560243 ttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 40607739 - 40607702
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  40607739 ttctcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1859585 - 1859554
Alignment:
Q  1 attctcaaaagggtcttataattaaggacgga 32  Q
    ||||||||||||||||||||||||||||||||    
T  1859585 attctcaaaagggtcttataattaaggacgga 1859554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 2060353 - 2060314
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  2060353 ttctcaaaagggtcttataattagggacggaggtagtaca 2060314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4711766 - 4711728
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  4711766 attctcaaaagggtcttttaattagggacggagggagta 4711728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5664676 - 5664638
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  5664676 attctcaaaaaggtcttataattagggacggagggagta 5664638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 7492108 - 7492142
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||| |||||||||||||||    
T  7492108 caaaagggtcttataattagggacggagggagtac 7492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8912873 - 8912911
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  8912873 attctcaaaagggtcttataattagggacggaggtagta 8912911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 9701104 - 9701070
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  9701104 tcaaaagggtcttataattaaggacggaggtagta 9701070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12360495 - 12360457
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  12360495 attctcaaaagggtcttataattaaagacggaggtagta 12360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15228148 - 15228186
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  15228148 attctcaaaaggatcttataattagggacggagggagta 15228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16805790 - 16805828
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  16805790 attctcaaaaggatcttataattagggacggagggagta 16805828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16845071 - 16845109
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  16845071 attctcaaaaggatcttataattagggacggagggagta 16845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22897429 - 22897391
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  22897429 attctcaaaaggatcttataattagggacggagggagta 22897391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25624771 - 25624733
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  25624771 attctcaaaaaggtcttataattagggacggagggagta 25624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26322292 - 26322330
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  26322292 attctcaaaagggtcttataattagggacggaggtagta 26322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 28566188 - 28566150
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  28566188 ttctcaaaagggtcttataattagggacggaggtagtac 28566150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34113569 - 34113531
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  34113569 attctcaaaagggtcttataattagggacggatggagta 34113531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 34113789 - 34113823
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagta 34113823  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40680765 - 40680727
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  40680765 attctcaaaagggtcttataattagggacggatggagta 40680727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45628878 - 45628916
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  45628878 attctcaaaagggtcttataattaaggatggaggtagta 45628916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 2438489 - 2438522
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  2438489 caaaagggtcttataattagggacggagggagta 2438522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 7116299 - 7116336
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  7116299 ttctcaaaagggtcttataattagggacggaggtagta 7116336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8990242 - 8990193
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaatt 50  Q
    |||||||||| | ||||||||||| |||||||||||||| ||||| ||||    
T  8990242 attctcaaaaagatcttataattagggacggagggagtataaaattaatt 8990193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 16108248 - 16108215
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  16108248 caaaagggtcttataattagggacggagggagta 16108215  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 22897655 - 22897688
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  22897655 caaaagggtcttataattagggacggagggagta 22897688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 32120978 - 32120937
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtacaaaata 46  Q
    |||||||| ||||||||||| ||||||||||||||| |||||    
T  32120978 tcaaaaggatcttataattagggacggagggagtacgaaata 32120937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 39833772 - 39833739
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  39833772 caaaagggtcttataattagggacggagggagta 39833739  T

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Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 45474384 - 45474351
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  45474384 caaaagggtcttataattagggacggagggagta 45474351  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 39
Target Start/End: Original strand, 22182929 - 22182961
Alignment:
Q  7 aaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||| ||||||||||||||    
T  22182929 aaaagggtcttataattagggacggagggagta 22182961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26334844 - 26334884
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||| |||||||||||| ||||||||| ||||||    
T  26334844 attctcaaaagagtcttataattagggacggaggtagtaca 26334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 42629405 - 42629373
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggag 37  Q
    |||||||||||||||||||| ||||||||||||    
T  42629405 tcaaaagggtcttataattagggacggagggag 42629373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 46878439 - 46878476
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46878439 ttctcaaaagggtcttataattaaggacggagggagta 46878476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 9499496 - 9499535
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9499496 attctcaaaagggtcttataattagggacggagggagtac 9499535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 54604591 - 54604626
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||||||||||||||||    
T  54604591 tcaaaagggtcttataattaaggacggagggagtac 54604626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6784501 - 6784463
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  6784501 attctcaaaagggtcttataattaaggacggaggtagta 6784463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10220971 - 10220933
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10220971 attctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12050391 - 12050429
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12050391 attctcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21756524 - 21756486
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21756524 attctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22103928 - 22103966
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22103928 attctcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25149121 - 25149159
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25149121 attctcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26593764 - 26593802
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26593764 attctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32467463 - 32467425
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  32467463 attctcaaaagggtcttataattaaggacggagagagta 32467425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35165961 - 35165999
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  35165961 attctcaaaagggtcttataattaaggacgaagggagta 35165999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35868082 - 35868120
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35868082 attctcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37728751 - 37728713
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37728751 attctcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43868141 - 43868103
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43868141 attctcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44543820 - 44543782
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44543820 attctcaaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45252811 - 45252773
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45252811 attctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51284061 - 51284099
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51284061 attctcaaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 7181387 - 7181350
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8546942 - 8546909
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    ||||||||||||||||||||||||||||||||||    
T  8546942 attctcaaaagggtcttataattaaggacggagg 8546909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 14428647 - 14428610
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  14428647 ttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 20862461 - 20862506
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtacaaaataaattg 51  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  20862461 caaaagggtcttataattagggacggagggagtattaaataaattg 20862506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 46049986 - 46050023
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 54782916 - 54782957
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaa 42  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  54782916 attctcaaaagggtcttataattagggacgaagggagtacaa 54782957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 4024088 - 4024052
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12683181 - 12683221
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  12683181 attctcaaaatggtcttataattagggacggagggagtaca 12683221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 29454787 - 29454823
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29454787 tctcaaaagggtcttataattaaggacggaggtagta 29454823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47066972 - 47066932
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  47066972 attctcaaaagggtcttataattagggacggaggaagtaca 47066932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 22527621 - 22527652
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggag 33  Q
    ||||||||||||||||||||||||||||||||    
T  22527621 ttctcaaaagggtcttataattaaggacggag 22527652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 31531415 - 31531450
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  31531415 caaaagggtcttataattagggacggagggagtaca 31531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 4024315 - 4024349
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||| |||||||||||||||    
T  4024315 caaaagggtcttataattagggacggagggagtac 4024349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4759350 - 4759388
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  4759350 attctcaaaagggtcttataattagggacggaggtagta 4759388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7051719 - 7051757
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  7051719 attctcaaaaggatcttataattagggacggagggagta 7051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8321963 - 8321925
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  8321963 attctcaaaagggtcttataattagggacggaggtagta 8321925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20862234 - 20862196
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  20862234 attctcaaaagggtcttataattagggacggatggagta 20862196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22832606 - 22832644
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  22832606 attctcaaaagggtcttataattagggacggaaggagta 22832644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23700784 - 23700822
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  23700784 attctcaaaaaggtcttataattagggacggagggagta 23700822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23719239 - 23719277
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  23719239 attctcaaaaaggtcttataattagggacggagggagta 23719277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23737695 - 23737733
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  23737695 attctcaaaaaggtcttataattagggacggagggagta 23737733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24087334 - 24087372
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  24087334 attctcaaaagggtcttataattagggacggaggtagta 24087372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26058584 - 26058546
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  26058584 attctcaaaagggtcttataattagggacggaggaagta 26058546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26221326 - 26221288
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  26221326 attctcaaaagagtcttataattagggacggagggagta 26221288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26306606 - 26306644
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  26306606 attctcaaaagggtcttataattaggaacggagggagta 26306644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 27688020 - 27687986
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  27688020 tcaaaagggtcttataattaaggacggaggtagta 27687986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 29719710 - 29719748
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  29719710 ttctcaaaagggtcttataattatggacggaggtagtac 29719748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32963104 - 32963142
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  32963104 attctcaaaaggatcttataattagggacggagggagta 32963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 33360919 - 33360885
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  33360919 tcaaaagggtcttataattaaggacggaggtagta 33360885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33868486 - 33868448
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  33868486 attctcaaaaggatcttataattagggacggagggagta 33868448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36099004 - 36098966
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  36099004 attctcaaaagggtcttataattagggacggatggagta 36098966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 37728977 - 37729011
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| ||||||||||    
T  37728977 caaaagggtcttataattaaggacagagggagtac 37729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41392879 - 41392917
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  41392879 attctcaaaagggtcttataattagggacggaggtagta 41392917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43701216 - 43701178
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  43701216 attctcaaaagggtcttataattagggacagagggagta 43701178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45324086 - 45324124
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  45324086 attctcaaaatggtcttataattaaggacggaggtagta 45324124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46845491 - 46845529
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  46845491 attctcaaaagggtcttataattagggacggaggtagta 46845529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50726782 - 50726820
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  50726782 attctcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 50786066 - 50786028
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  50786066 attctcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 53361854 - 53361892
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  53361854 attctcaaaatggtcttataattagggacggagggagta 53361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 9780012 - 9779979
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  9780012 caaaagggtcttataattagggacggagggagta 9779979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 14428873 - 14428906
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  14428873 caaaagggtcttataattagggacggagggagta 14428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 15996776 - 15996813
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtacaa 42  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  15996776 tcaaaagggtcttataattagggacggaggtagtacaa 15996813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 16435010 - 16434977
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  16435010 caaaagggtcttataattagggacggagggagta 16434977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20918257 - 20918224
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  20918257 attctcaaaagggtcttataattagggacggagg 20918224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 20927219 - 20927186
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  20927219 attctcaaaagggtcttataattagggacggagg 20927186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 26306387 - 26306354
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| |||||||||    
T  26306387 caaaagggtcttataattaaggacagagggagta 26306354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 26806148 - 26806115
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  26806148 caaaagggtcttataattagggacggagggagta 26806115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 33868712 - 33868745
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  33868712 caaaagggtcttataattagggacggagggagta 33868745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 36005768 - 36005801
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  36005768 caaaagggtcttataattagggacggagggagta 36005801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46703065 - 46703032
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    |||||||||||||||||||||||| |||||||||    
T  46703065 attctcaaaagggtcttataattagggacggagg 46703032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 50647717 - 50647684
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  50647717 caaaagggtcttataattagggacggagggagta 50647684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 50647944 - 50647981
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||  |||||||||||||    
T  50647944 ttctcaaaagggtcttataattagagacggagggagta 50647981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 52059018 - 52058985
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagta 52058985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 53164201 - 53164160
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaa 42  Q
    |||||||||||| ||||||||||| ||||||||| |||||||    
T  53164201 attctcaaaaggatcttataattagggacggaggtagtacaa 53164160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1572369 - 1572337
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  1572369 attctcaaaagggtcttataattagggacggag 1572337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 31186792 - 31186764
Alignment:
Q  5 tcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||||||||    
T  31186792 tcaaaagggtcttataattaaggacggag 31186764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 31397803 - 31397771
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagg 34  Q
    ||||||||||||||||||||||||||| |||||    
T  31397803 ttctcaaaagggtcttataattaaggaaggagg 31397771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 13648130 - 13648166
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  13648130 tctcaaaagggtcttataattaaggacggagggagta 13648166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 231104 - 231147
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  231104 attctcaaaagggtcttataattagggacggagggagtaaaaaa 231147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4844438 - 4844400
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4844438 attctcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8743226 - 8743188
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8743226 attctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30248685 - 30248647
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30248685 attctcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34301831 - 34301869
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34301831 attctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 9038676 - 9038641
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||| |||||||||||||||    
T  9038676 tcaaaagggtcttataattagggacggagggagtac 9038641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 23398141 - 23398176
Alignment:
Q  4 ctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggagggagta 23398176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 287413 - 287451
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  287413 attctcaaaaaggtcttataattagggacggagggagta 287451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 402620 - 402658
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  402620 attctcaaaagggtcttataattagggacggaggtagta 402658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 925932 - 925970
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  925932 attctcaaaagggtcttataattaggaacggagggagta 925970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2090696 - 2090658
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  2090696 attctcaaaagggtcttataattagggacggaggtagta 2090658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5457450 - 5457412
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  5457450 attctcaaaaaggtcttataattagggacggagggagta 5457412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9388790 - 9388828
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  9388790 attctcaaaaaggtcttataattagggacggagggagta 9388828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10195992 - 10196030
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  10195992 attctcaaaagggtcttataattagagacggagggagta 10196030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 11847835 - 11847869
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagta 11847869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13901679 - 13901641
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  13901679 attctcaaaagggtcttataattagggacggaggtagta 13901641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15498667 - 15498629
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  15498667 attctcaaaagggtcttataattagggacggaggtagta 15498629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19097800 - 19097838
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  19097800 attctcaaaagggtcttataattagagacggagggagta 19097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25045642 - 25045680
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  25045642 attctcaaaagggtcttataattagggacggaggtagta 25045680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33487871 - 33487833
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  33487871 attctcaaaaaggtcttataattagggacggagggagta 33487833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34915542 - 34915580
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  34915542 attctcaaaagggtcttataattagggacggaggtagta 34915580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 9388562 - 9388529
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  9388562 caaaagggtcttataattagggacggagggagta 9388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 11161888 - 11161851
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  11161888 ttctcaaaaggctcttataattaaggacggaggtagta 11161851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 12144043 - 12144084
Alignment:
Q  7 aaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||| ||||||||||||||  |||||||    
T  12144043 aaaagggtcttataattagggacggagggagtattaaataaa 12144084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13011120 - 13011157
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  13011120 ttctcaaaaggatcttataattaaggacggaggtagta 13011157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 23604497 - 23604460
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  23604497 ttctcaaaagggtcttataattagggacggaggtagta 23604460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 25197189 - 25197152
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  25197189 ttctcaaaaggatcttataattagggacggagggagta 25197152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 34741730 - 34741763
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  34741730 caaaagggtcttataattagggacggagggagta 34741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 1730104 - 1730140
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  1730104 tcaaaaggatcttataattagggacggagggagtaca 1730140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 17227527 - 17227559
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagg 34  Q
    ||||||||||||||||||||||| |||||||||    
T  17227527 ttctcaaaagggtcttataattagggacggagg 17227559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7139 - 7186
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  7139 attctcaaaagggtcttataattagggacggaggaagtaaaaaataaa 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12103 - 12056
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||    
T  12103 attctcaaaagggtcttataattagggacggagggagtataagataaa 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 9828431 - 9828392
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  9828431 attctcaaaagggtcttataattagggacggagggagtac 9828392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26894872 - 26894919
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||    
T  26894872 attctcaaaagggtcttataattagggacggagggagtataatataaa 26894919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1265987 - 1265949
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1265987 attctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 3028050 - 3028004
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||    
T  3028050 ttctcaaaagggtcttataattagggacggaggtagtataaaataaa 3028004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5528012 - 5527974
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5528012 attctcaaaaaggtcttataattaaggacggagggagta 5527974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6673227 - 6673265
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6673227 attctcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14913686 - 14913648
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  14913686 attctcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16127297 - 16127259
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16127297 attctcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22527730 - 22527692
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22527730 attctcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40004408 - 40004446
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40004408 attctcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 7951598 - 7951562
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 34662240 - 34662204
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 4976293 - 4976336
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||    
T  4976293 tcaaaagggtcttataattagggacggaggtagtactaaataaa 4976336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13862994 - 13863033
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  13862994 attctcaaaagggtcatataattagggacggagggagtac 13863033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 42561348 - 42561383
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggaggga 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  42561348 attctcaaaaggatcttataattaaggacggaggga 42561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 9020728 - 9020694
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  9020728 tcaaaagggtcttataattagggacggagggagta 9020694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 9828657 - 9828691
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtac 40  Q
    ||||||||||||||||||| |||||||||||||||    
T  9828657 caaaagggtcttataattagggacggagggagtac 9828691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 10734526 - 10734560
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagta 10734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15190814 - 15190852
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  15190814 attctcaaaagagtcttataattagggacggagggagta 15190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15521941 - 15521979
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  15521941 attctcaaaagggttttataattagggacggagggagta 15521979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16153254 - 16153292
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  16153254 attctcaaaagggtcttataattagggacggatggagta 16153292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16440969 - 16440931
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  16440969 attcttaaaagggtcttataattagggacggagggagta 16440931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23286473 - 23286511
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  23286473 attctcaaaagggtcttataattagggacggaggtagta 23286511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25601059 - 25601097
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  25601059 attctcaaaagggtcttataattaggaacggagggagta 25601097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32147332 - 32147294
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  32147332 attctcaaaaaggtcttataattagggacggagggagta 32147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41384171 - 41384209
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  41384171 attctcaaaaggatcttataattagggacggagggagta 41384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43060410 - 43060448
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  43060410 attctcaaaagggtcttataattagggacggaggtagta 43060448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 186362 - 186395
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  186362 caaaagggtcttataattagggacggagggagta 186395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 3497800 - 3497837
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  3497800 ttctcaaaagggtcttataattaggaacggagggagta 3497837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 8949849 - 8949812
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  8949849 ttctcaaaagggtcttataattagggacggaggtagta 8949812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 23260138 - 23260175
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  23260138 ttctcaaaagggtcttataattagggacggaggtagta 23260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24308139 - 24308172
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  24308139 attctcaaaagagtcttataattaaggacggagg 24308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24365184 - 24365151
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  24365184 attctcaaaagagtcttataattaaggacggagg 24365151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39984808 - 39984775
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagg 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  39984808 attcttaaaagggtcttataattaaggacggagg 39984775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14789590 - 14789558
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||| ||||||||||    
T  14789590 attctcaaaagggtcttataataaaggacggag 14789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 18251051 - 18251019
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagg 34  Q
    |||| ||||||||||||||||||||||||||||    
T  18251051 ttcttaaaagggtcttataattaaggacggagg 18251019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 19571940 - 19571976
Alignment:
Q  3 tctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagta 19571976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 27873344 - 27873376
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  27873344 attctcaaaagggtcttataattagggacggag 27873376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32478176 - 32478144
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggag 33  Q
    |||||||||||||||||||||||| ||||||||    
T  32478176 attctcaaaagggtcttataattagggacggag 32478144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000006; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1039380 - 1039419
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1039380 attctcaaaagggtcttataattagggacggagggagtac 1039419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1046286 - 1046325
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtac 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  1046286 attctcaaaagggtcttataattagggacggagggagtac 1046325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 943636 - 943674
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  943636 attctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4102713 - 4102751
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4102713 attctcaaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11741435 - 11741397
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11741435 attctcaaaagggtcttataattagggacggagggagta 11741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15811231 - 15811269
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  15811231 attctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23542017 - 23541979
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23542017 attctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36694892 - 36694854
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36694892 attctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36710993 - 36710955
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36710993 attctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37951948 - 37951986
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37951948 attctcaaaagggtcttataattagggacggagggagta 37951986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38261378 - 38261340
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  38261378 attctcaaaagggtcttataattaaggacggaggtagta 38261340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39363193 - 39363231
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  39363193 attctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39497471 - 39497433
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  39497471 attctcaaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44649667 - 44649629
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44649667 attctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45039450 - 45039412
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45039450 attctcaaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46075866 - 46075904
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  46075866 attctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 49907059 - 49907021
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49907059 attctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52431173 - 52431211
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  52431173 attctcaaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30289861 - 30289898
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagt 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  30289861 attctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 30290302 - 30290265
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32169953 - 32169989
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggag 37  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32169953 attctcaaaatggtcttataattaaggacggagggag 32169989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13343811 - 13343776
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggaggga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  13343811 attctcaaaagggtcttataattagggacggaggga 13343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 23542243 - 23542278
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtaca 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23542243 caaaagggtcttataattagggacggagggagtaca 23542278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39750380 - 39750427
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagtacaaaataaa 48  Q
    |||||||||||||||||||||||| |||| |||||||||  |||||||    
T  39750380 attctcaaaagggtcttataattagggacagagggagtaggaaataaa 39750427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1427237 - 1427199
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  1427237 attctcaaaagggtcttatatttaaggacggaggtagta 1427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7763748 - 7763786
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  7763748 attctcaaaagggtcttataattagggacggaggtagta 7763786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7784029 - 7783991
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  7784029 attctcaaaagggtattataattagggacggagggagta 7783991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14171580 - 14171542
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  14171580 attctcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 23530576 - 23530542
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||||||||| ||||    
T  23530576 tcaaaagggtcttataattaaggacggaggtagta 23530542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25509247 - 25509209
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  25509247 attctcaaaagggtcttataattagggacggaggtagta 25509209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27037307 - 27037269
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  27037307 attctcaaaagggtcttataattagggacggaggtagta 27037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 38920273 - 38920239
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  38920273 tcaaaagggtcttataattagggacggagggagta 38920239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 39750154 - 39750116
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  39750154 caaaagggtcttataattagggacggagggagtataaaa 39750116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41855472 - 41855510
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  41855472 attctcaaaagggtcttataattagggacggatggagta 41855510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43456620 - 43456658
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  43456620 attctcaaaagggtcttataattagggacggaggtagta 43456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45335923 - 45335885
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  45335923 attctcaaaagggtcttataattagggagggagggagta 45335885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50246928 - 50246966
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  50246928 attctcaaaaggatcttataattacggacggagggagta 50246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52602029 - 52601991
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  52602029 attcttaaaagggtcttataattagggacggagggagta 52601991  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 1048025 - 1047992
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  1048025 caaaagggtcttataattagggacggagggagta 1047992  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 9202278 - 9202245
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  9202278 caaaagggtcttataattagggacggagggagta 9202245  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 16456673 - 16456636
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  16456673 ttctcagaagggtcttataattagggacggagggagta 16456636  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 39362967 - 39362934
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  39362967 caaaagggtcttataattagggacggagggagta 39362934  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 39497697 - 39497730
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  39497697 caaaagggtcttataattagggacggagggagta 39497730  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 42276161 - 42276198
Alignment:
Q  2 ttctcaaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  42276161 ttctcaaaagggtcttataattagggacggaggtagta 42276198  T

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Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 44646535 - 44646568
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  44646535 caaaagggtcttataattagggacggagggagta 44646568  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 44649893 - 44649926
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  44649893 caaaagggtcttataattagggacggagggagta 44649926  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 25227338 - 25227302
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtaca 41  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  25227338 tcaaaagggtcttataattagggacggaggtagtaca 25227302  T

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Target: scaffold0604 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3781 - 3819
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  3781 attctcaaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51681 - 51719
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51681 attctcaaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47678 - 47640
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47678 attctcaaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0008 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 259121 - 259159
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  259121 attctcaaaagggtcttataattagggacggagggagta 259159  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 355334 - 355373
Alignment:
Q  5 tcaaaagggtcttataattaaggacggagggagtacaaaa 44  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  355334 tcaaaagggtcttataattagggacggagggagtataaaa 355373  T

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Target: scaffold0674 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5189 - 5151
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  5189 attctcaaaagggtcttataattagggacggaggtagta 5151  T

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Target: scaffold0549 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10181 - 10219
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  10181 attctcaaaagggtcttataattagggacggaggtagta 10219  T

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Target: scaffold0240 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18535 - 18497
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  18535 attctcaaaagggtcttataattagggacggaggtagta 18497  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3476 - 3438
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  3476 attctcaaaagggtcttataattagggacggaggtagta 3438  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48692 - 48654
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  48692 attctcaaaagggtcttataattagggacggaggtagta 48654  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 65636 - 65674
Alignment:
Q  1 attctcaaaagggtcttataattaaggacggagggagta 39  Q
    |||||||||| ||||||||||||| ||||||||||||||    
T  65636 attctcaaaaaggtcttataattagggacggagggagta 65674  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 65411 - 65378
Alignment:
Q  6 caaaagggtcttataattaaggacggagggagta 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  65411 caaaagggtcttataattagggacggagggagta 65378  T

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Target: scaffold0130 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 24253 - 24224
Alignment:
Q  3 tctcaaaagggtcttataattaaggacgga 32  Q
    ||||||||||||||||||||||||||||||    
T  24253 tctcaaaagggtcttataattaaggacgga 24224  T

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