View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2479_low_46 (Length: 360)

Name: NF2479_low_46
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2479_low_46
NF2479_low_46
[»] chr1 (9 HSPs)
chr1 (1-321)||(17577483-17577803)
chr1 (61-171)||(3887555-3887665)
chr1 (61-112)||(11941299-11941350)
chr1 (4-45)||(11941300-11941341)
chr1 (61-168)||(2295133-2295240)
chr1 (76-171)||(27146178-27146273)
chr1 (4-43)||(27820189-27820228)
chr1 (61-115)||(4481967-4482020)
chr1 (61-115)||(47498818-47498872)
[»] chr5 (9 HSPs)
chr5 (61-163)||(10639990-10640092)
chr5 (61-112)||(7808542-7808593)
chr5 (61-111)||(39105501-39105551)
chr5 (4-45)||(7808543-7808584)
chr5 (98-171)||(9107164-9107237)
chr5 (61-171)||(16937806-16937916)
chr5 (61-115)||(42582375-42582428)
chr5 (78-171)||(41419373-41419466)
chr5 (131-171)||(35299872-35299912)
[»] chr3 (8 HSPs)
chr3 (61-141)||(21367704-21367784)
chr3 (61-115)||(53952085-53952138)
chr3 (78-171)||(31365111-31365204)
chr3 (80-165)||(34610735-34610820)
chr3 (61-115)||(402521-402575)
chr3 (129-171)||(16072964-16073006)
chr3 (4-45)||(26878238-26878279)
chr3 (65-114)||(39723381-39723429)
[»] chr4 (9 HSPs)
chr4 (61-171)||(17822788-17822898)
chr4 (61-171)||(13126499-13126609)
chr4 (64-115)||(49939930-49939981)
chr4 (61-144)||(54069367-54069450)
chr4 (129-171)||(27043753-27043795)
chr4 (61-171)||(52315120-52315230)
chr4 (62-167)||(25904150-25904255)
chr4 (6-43)||(49939944-49939981)
chr4 (98-171)||(49940090-49940163)
[»] chr7 (7 HSPs)
chr7 (37-170)||(48470058-48470190)
chr7 (81-168)||(19302489-19302576)
chr7 (77-115)||(17248605-17248643)
chr7 (61-115)||(20526483-20526537)
chr7 (61-115)||(39967957-39968011)
chr7 (65-114)||(43219785-43219833)
chr7 (78-162)||(33601342-33601426)
[»] chr8 (10 HSPs)
chr8 (61-153)||(1930072-1930164)
chr8 (100-171)||(43717857-43717928)
chr8 (61-108)||(1113095-1113142)
chr8 (76-115)||(7514630-7514669)
chr8 (61-168)||(32840912-32841019)
chr8 (61-171)||(30251377-30251487)
chr8 (61-115)||(33808340-33808394)
chr8 (129-171)||(38602432-38602474)
chr8 (4-40)||(1930073-1930109)
chr8 (78-142)||(28763422-28763486)
[»] chr6 (6 HSPs)
chr6 (61-112)||(28641732-28641782)
chr6 (61-115)||(9912170-9912224)
chr6 (4-43)||(9912184-9912223)
chr6 (65-114)||(696483-696531)
chr6 (76-157)||(9559359-9559440)
chr6 (103-171)||(21405077-21405145)
[»] chr2 (8 HSPs)
chr2 (61-115)||(43570451-43570504)
chr2 (58-155)||(18066162-18066259)
chr2 (63-115)||(750709-750761)
chr2 (61-171)||(4606962-4607072)
chr2 (129-171)||(15305779-15305821)
chr2 (61-115)||(16451155-16451209)
chr2 (61-114)||(36534805-36534858)
chr2 (103-171)||(30331830-30331898)
[»] scaffold0608 (1 HSPs)
scaffold0608 (61-115)||(9617-9670)


Alignment Details
Target: chr1 (Bit Score: 284; Significance: 1e-159; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 321
Target Start/End: Complemental strand, 17577803 - 17577483
Alignment:
Q  1 acaaaaataagcttaaaacagcttatgaacaatgtaataagctatctttgaataatgtaagaaaataagctaaagacagcttatgaacaatgttatcagc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17577803 acaaaaataagcttaaaacagcttatgaacaatgtaataagctatctttgaataatgtaagaaaataagctaaagacagcttatgaacaatgttatcagc 17577704  T
Q  101 tgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatccagtaaaacctcaattcaaagttcattgaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17577703 tgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatctagtaaaacctcaattcaaagttccttgaat 17577604  T
Q  201 aaaattctattttttctgatattttcgtgagtttcctatgatatttctannnnnnncttcataaatatatgacatttccatttatgatgcttgaatattc 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  17577603 aaaattctaatttttctgatattttcgtgagtttcctatgatatttctatttttttcttcataaatatatgacatttccatttatgatgcttgaatattc 17577504  T
Q  301 acgagcactagcatcgagcta 321  Q
    ||||||| |||||||||||||    
T  17577503 acgagcattagcatcgagcta 17577483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 3887665 - 3887555
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||| |||| |||||||||||||||||| || || |||||||||||||||  ||||| |     |||||||||||  ||||||  ||||||| ||    
T  3887665 gaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacagccttacaaaacttataccaatagtaaagctcaaat 3887566  T
Q  161 aagtcaatcca 171  Q
    |||||||||||    
T  3887565 aagtcaatcca 3887555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 11941299 - 11941350
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataag 112  Q
    ||||||||||| || ||||||||||||||||||||| |||| ||||||||||    
T  11941299 gaaaataagctgaaaacagcttatgaacaatgttataagctattttcataag 11941350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 11941300 - 11941341
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataagctat 45  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  11941300 aaaataagctgaaaacagcttatgaacaatgttataagctat 11941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 2295133 - 2295240
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||| | || | |||||||||| | ||| || ||||||||||||||||||  ||||| | |  ||||||||||||| || ||| |||||||| ||    
T  2295133 gaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaat 2295232  T
Q  161 aagtcaat 168  Q
    ||| ||||    
T  2295233 aagccaat 2295240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 171
Target Start/End: Complemental strand, 27146273 - 27146178
Alignment:
Q  76 acagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||||||| || || ||||| | |||||||  ||||  | |  ||||||||||||| |||||| |||||||| || ||||||||||    
T  27146273 acagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtcaatcca 27146178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 27820228 - 27820189
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataagct 43  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  27820228 aaaataagctgaaaatagcttatgaacaatgtaataagct 27820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 4481967 - 4482020
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| ||||||||||||| |||| || || |||||||||||||||    
T  4481967 gaaaataagctaaaaacagcttatgaac-atgtaataagttgttttcataagttc 4482020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 47498872 - 47498818
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| ||| |||||||||||| | || |||| |||||||||||||    
T  47498872 gaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttc 47498818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 10639990 - 10640092
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    |||||||||||| | | |||||||||| ||||| || ||||||||||||||||||  ||||| | || |||||||||||||||| ||| ||| |||| ||    
T  10639990 gaaaataagctagaaaaagcttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaat 10640089  T
Q  161 aag 163  Q
    |||    
T  10640090 aag 10640092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 7808542 - 7808593
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataag 112  Q
    ||||||||||| || ||||||||||||||||||||| |||| ||||||||||    
T  7808542 gaaaataagctgaaaacagcttatgaacaatgttataagctattttcataag 7808593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 39105501 - 39105551
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataa 111  Q
    |||||||||||||| | |||||||||||||||| || ||||||||||||||    
T  39105501 gaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataa 39105551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 7808543 - 7808584
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataagctat 45  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  7808543 aaaataagctgaaaacagcttatgaacaatgttataagctat 7808584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 9107164 - 9107237
Alignment:
Q  98 agctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||| |||||  ||||| |||  |||||||||||||||| ||| ||| |||| |||||||||||||    
T  9107164 agctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaatcca 9107237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 16937916 - 16937806
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||||| || | ||||||||||   ||| || ||||||||||||||||||  ||||| | |  |||||||||||||  | ||| |||||||| ||    
T  16937916 gaaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaat 16937817  T
Q  161 aagtcaatcca 171  Q
    ||| |||||||    
T  16937816 aagccaatcca 16937806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 42582428 - 42582375
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||| ||||||||| |||| |||||||||||||||| ||||||| ||||||||||    
T  42582428 gaaactaagctaaa-acagtttatgaacaatgttataagctgttctcataagttc 42582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 171
Target Start/End: Original strand, 41419373 - 41419466
Alignment:
Q  78 agcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||| ||||||||||| || ||||||||||| |||||   ||||| | |  ||||||| |||||||| ||| | |||||| |||||||||||||    
T  41419373 agctcatgaacaatgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatcca 41419466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 35299872 - 35299912
Alignment:
Q  131 caaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    ||||||| |||||||||| |||||||| |||||||||||||    
T  35299872 caaaactcatgtcaatagataagctcaaataagtcaatcca 35299912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 21367704 - 21367784
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatg 141  Q
    ||||||||||| || ||||||| |||||||||| || ||||||||||||||||||  ||||| | | ||||||||||||||    
T  21367704 gaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaacagtcccacaaaacttatg 21367784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 53952085 - 53952138
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||||| || |||||| ||||||| |||||||||||||||||||||||||    
T  53952085 gaaaataagctgaaaacagctcatgaaca-tgttatcagctgttttcataagttc 53952138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 31365204 - 31365111
Alignment:
Q  78 agcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||| | ||| || ||||| ||||||||||||  ||||| | |  ||||||||||||| |||||| |||||||| ||||| |||||||    
T  31365204 agcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 34610820 - 34610735
Alignment:
Q  80 cttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtc 165  Q
    |||||||||||||| || ||| ||||||||||||||  ||||| | |   ||||||||||||||| ||| |||||||| |||||||    
T  34610820 cttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctcaaataagtc 34610735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 402575 - 402521
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||| |||||| || |||||||||||||||||| || ||||||||||||| ||||    
T  402575 gaaattaagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttc 402521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 16073006 - 16072964
Alignment:
Q  129 cacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||||| ||| |||||||| |||||||||||||    
T  16073006 cacaaaacttatgtcattagataagctcaaataagtcaatcca 16072964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 26878238 - 26878279
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataagctat 45  Q
    |||||||||| ||||||| ||||||||||||| |||||||||    
T  26878238 aaaataagctgaaaacagtttatgaacaatgtcataagctat 26878279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 39723429 - 39723381
Alignment:
Q  65 ataagctaaagacagcttatgaacaatgttatcagctgttttcataagtt 114  Q
    |||||||||| ||||||||||||| |||| || |||||||||||||||||    
T  39723429 ataagctaaaaacagcttatgaac-atgtcataagctgttttcataagtt 39723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 17822898 - 17822788
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    |||||||||||||| | |||||||||| ||||| || ||||||||||||| ||||  | ||| | |  |||| ||||||||||| ||| |||||||| ||    
T  17822898 gaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaat 17822799  T
Q  161 aagtcaatcca 171  Q
    |||| ||||||    
T  17822798 aagttaatcca 17822788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 13126609 - 13126499
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||||| || | |||||||||  ||||| || ||||||||| ||||||||  ||||| | |  |||||||||||||| | |||||||||| | ||    
T  13126609 gaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaacttatgttagtaggtaagctaaaat 13126510  T
Q  161 aagtcaatcca 171  Q
    ||| |||||||    
T  13126509 aagccaatcca 13126499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 49939981 - 49939930
Alignment:
Q  64 aataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||| || |||||||||||||||||| || |||| |||||||||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttc 49939930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 54069450 - 54069367
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtca 144  Q
    ||||||||| |||| |||||||||||| | |||| | ||||||||||| || | | |||||| | | |||||||||||||||||    
T  54069450 gaaaataagttaaaaacagcttatgaaaattgttgtaagctgttttcaaaaatcctaccaaacagtcccacaaaacttatgtca 54069367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 27043795 - 27043753
Alignment:
Q  129 cacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||||| ||| |||||||| |||||||||||||    
T  27043795 cacaaaacttatgtcagtagataagctcaaataagtcaatcca 27043753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 52315230 - 52315120
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||||| ||  || |||||||| ||||| || || |||||| ||||||||  ||||| | |  ||||||||||| |||| ||| ||| |||| ||    
T  52315230 gaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactcaaat 52315131  T
Q  161 aagtcaatcca 171  Q
    |||||||||||    
T  52315130 aagtcaatcca 52315120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 25904255 - 25904150
Alignment:
Q  62 aaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagata 161  Q
    |||||||||| || | |||||||||| ||||  || ||||||||||||||| ||  ||||| | |  ||||||| |||||||| | | |||||||| |||    
T  25904255 aaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaata 25904156  T
Q  162 agtcaa 167  Q
    ||||||    
T  25904155 agtcaa 25904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 49939981 - 49939944
Alignment:
Q  6 aataagcttaaaacagcttatgaacaatgtaataagct 43  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagct 49939944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 49940163 - 49940090
Alignment:
Q  98 agctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    ||||||||||||||||||   |||| | |  |||||||||||||| |  ||||||||||| |||||||||||||    
T  49940163 agctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatcca 49940090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 48470058 - 48470190
Alignment:
Q  37 ataagctatctttgaataatgtaagaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaac 136  Q
    ||||||||| |||||||||  || ||| ||||||| || | |||||||||| ||||  || ||||||||||||||||||  ||||| | |  || |||||    
T  48470058 ataagctat-tttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaaacaatctcataaaac 48470156  T
Q  137 ttatgtcaataggtaagctcagataagtcaatcc 170  Q
    ||||||| |||| |||||||| ||||| ||||||    
T  48470157 ttatgtctatagataagctcaaataagccaatcc 48470190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 19302576 - 19302489
Alignment:
Q  81 ttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaat 168  Q
    ||||||| | ||| || |||||||||||||| |||  ||||| |||  |||||||||||||||| ||| |||||||| ||||||||||    
T  19302576 ttatgaaaattgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaat 19302489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 17248605 - 17248643
Alignment:
Q  77 cagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  17248605 cagcttatgaacaatgttataagctgtttttataagttc 17248643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 20526483 - 20526537
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| |||||||| ||| ||||| || | ||||||||||||||||    
T  20526483 gaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttc 20526537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 39967957 - 39968011
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||| | || |||||||||||||||||  || ||||||||||||||||||    
T  39967957 gaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttc 39968011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 43219833 - 43219785
Alignment:
Q  65 ataagctaaagacagcttatgaacaatgttatcagctgttttcataagtt 114  Q
    |||||||||| ||||||||||||| |||| || |||||||||||||||||    
T  43219833 ataagctaaaaacagcttatgaac-atgtcataagctgttttcataagtt 43219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 33601426 - 33601342
Alignment:
Q  78 agcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataa 162  Q
    |||||||||| | ||| || ||||||||||||||||||    ||||| |  ||||||||||||| |||||| |||||||| ||||    
T  33601426 agcttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 1930072 - 1930164
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaag 153  Q
    ||||||||||| || |||||||||||||||||| || | ||||||||| ||||||  ||||| | |  |||||||||||||||| ||| ||||    
T  1930072 gaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaaaacttatgtcagtagataag 1930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 43717928 - 43717857
Alignment:
Q  100 ctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    ||||||||||||||||  ||||| | |  |||||||||||||||||||| |||||||| ||||| |||||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatcca 43717857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 1113095 - 1113142
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttca 108  Q
    |||||| ||||||| ||||||||||||||||||| | |||||||||||    
T  1113095 gaaaattagctaaaaacagcttatgaacaatgttttaagctgttttca 1113142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 7514630 - 7514669
Alignment:
Q  76 acagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  7514630 acagcttatgaacaatgttatcagctgctttcacaagttc 7514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 32841019 - 32840912
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||||| || ||| |||||||||||||| || || |||||||||||||||  ||||| | |  | |||||||| ||| | ||| ||||||||  |    
T  32841019 gaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctcaagt 32840920  T
Q  161 aagtcaat 168  Q
    ||||||||    
T  32840919 aagtcaat 32840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 30251487 - 30251377
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    |||||||||||  | | |||||||||| ||||  || |||||||||| |||||||  ||||| | |  ||| |||||||||||| ||| |||||||| ||    
T  30251487 gaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaat 30251388  T
Q  161 aagtcaatcca 171  Q
    ||| |||||||    
T  30251387 aagccaatcca 30251377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 33808340 - 33808394
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| ||| |||||||||||| | || |||| |||||||||||||    
T  33808340 gaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttc 33808394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 38602432 - 38602474
Alignment:
Q  129 cacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||||| ||| |||||||| |||||||||||||    
T  38602432 cacaaaacttatgtcagtagataagctcaaataagtcaatcca 38602474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 1930073 - 1930109
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataa 40  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  1930073 aaaataagctgaaaacagcttatgaacaatgtcataa 1930109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 28763422 - 28763486
Alignment:
Q  78 agcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgt 142  Q
    |||||||||| | |||||| ||||||||||||||||||  ||||| | |  ||||||||||||||    
T  28763422 agcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgt 28763486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 28641782 - 28641732
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataag 112  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||    
T  28641782 gaaaataagctaaaaacagcttatgaac-atgttataagctgttttcataag 28641732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 9912224 - 9912170
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||||| || |||||||||||||||||| || ||||| ||||||||||||    
T  9912224 gaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttc 9912170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 9912223 - 9912184
Alignment:
Q  4 aaaataagcttaaaacagcttatgaacaatgtaataagct 43  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  9912223 aaaataagctcaaaacagcttatgaacaatgtcataagct 9912184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 696483 - 696531
Alignment:
Q  65 ataagctaaagacagcttatgaacaatgttatcagctgttttcataagtt 114  Q
    |||||||||| ||||||||||||| |||| || |||||||||||||||||    
T  696483 ataagctaaaaacagcttatgaac-atgtcataagctgttttcataagtt 696531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 9559440 - 9559359
Alignment:
Q  76 acagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctca 157  Q
    ||||||||||||||||||| | |||||||||||||| |||  | ||| | |  ||||||||||||| |||||| ||| ||||    
T  9559440 acagcttatgaacaatgttgtaagctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctca 9559359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Complemental strand, 21405145 - 21405077
Alignment:
Q  103 ttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    ||||||| |||||  ||||| |||  |||||||||||||||| ||  |||||||| |||||||||||||    
T  21405145 ttttcattagttcccccaaatattctcacaaaacttatgtcagtatataagctcaaataagtcaatcca 21405077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 43570451 - 43570504
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| | |||||||||||||||| || ||||||||||||||||||    
T  43570451 gaaaataagctaaaaa-agcttatgaacaatgtcataagctgttttcataagttc 43570504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 18066162 - 18066259
Alignment:
Q  58 taagaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagct 155  Q
    |||||||||||| | || | ||||||||| |||||| || |||||||||||||||||  || ||| | |  |||||||||||||||| ||| ||||||    
T  18066162 taagaaaataaggtgaaaatagcttatgagcaatgtcataagctgttttcataagttgtacaaaacagtttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 750709 - 750761
Alignment:
Q  63 aaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||| || |||||||||||||||||| || |||| |||||||||||||    
T  750709 aaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttc 750761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 4606962 - 4607072
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagat 160  Q
    ||||||||||||||  ||||| ||||||||||| || || |||||||| ||||||  ||||| | |  |||||||||||| |   ||| |||||||| ||    
T  4606962 gaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaat 4607061  T
Q  161 aagtcaatcca 171  Q
    ||| |||||||    
T  4607062 aagccaatcca 4607072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 15305779 - 15305821
Alignment:
Q  129 cacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||||||||| |||||||| ||||| |||||||    
T  15305779 cacaaaacttatgtcaatagataagctcaaataagccaatcca 15305821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 16451155 - 16451209
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    ||||||||||| || |||||| ||||||||||| || || |||||||||||||||    
T  16451155 gaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttc 16451209  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 36534805 - 36534858
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagtt 114  Q
    ||||||||||| || | || ||||||||||| |||| |||||||||||||||||    
T  36534805 gaaaataagctgaaaatagattatgaacaattttataagctgttttcataagtt 36534858  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 30331830 - 30331898
Alignment:
Q  103 ttttcataagttcaaccaaagattaccacaaaacttatgtcaataggtaagctcagataagtcaatcca 171  Q
    |||||||||||||  ||||| | |  |||||||||||||||| ||| |||||| | |||||||||||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatcca 30331898  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 9670 - 9617
Alignment:
Q  61 gaaaataagctaaagacagcttatgaacaatgttatcagctgttttcataagttc 115  Q
    |||||||||||||| ||||||||||||| |||| || || |||||||||||||||    
T  9670 gaaaataagctaaaaacagcttatgaac-atgtaataagttgttttcataagttc 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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