View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2479_low_80 (Length: 295)
Name: NF2479_low_80
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2479_low_80 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 7 - 279
Target Start/End: Original strand, 5237736 - 5238008
Alignment:
| Q |
7 |
gaataccaataacttcagaaccaacagcatgtgaagtaaaaggaccaagtaaagaagataaaacagaaacaccacctccatcaatcacagacttccttgc |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5237736 |
gaataccaataacttcagaaccaacagcatgtgaagtaaaaggaccaagtaaagaagataaaacagaaacaccacctccatcaatcacagacttccttgc |
5237835 |
T |
|
| Q |
107 |
agtagcatgaacagacacaacttgatgaagctccttcaaagcatgaactctagcttgacccttcaccttcttgagtgtctccacaagctcagaagctctt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5237836 |
agtagcatgaacagacacaacttgatgaagctccttcaaagcatgaactctagcttgacccttcaccttcttgagtgtctccacaagctcagaagctctt |
5237935 |
T |
|
| Q |
207 |
ccttgaacatcttcagacctcttcttcatcaacagatacttctgagaaaaccaagtatatatcaacctataaa |
279 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5237936 |
ccttgaacatcttcggacctcttcttcatcaacagatacttctgagaaaaccaagtatatatcaacctataaa |
5238008 |
T |
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