View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2479_low_94 (Length: 271)

Name: NF2479_low_94
Description: NF2479
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2479_low_94
NF2479_low_94
[»] chr7 (37 HSPs)
chr7 (26-258)||(6592690-6592921)
chr7 (25-258)||(18392549-18392781)
chr7 (26-258)||(6594906-6595137)
chr7 (26-247)||(32060668-32060888)
chr7 (23-245)||(20343497-20343718)
chr7 (26-258)||(1562356-1562587)
chr7 (125-258)||(18389113-18389246)
chr7 (26-251)||(24789426-24789651)
chr7 (26-244)||(2058388-2058604)
chr7 (46-244)||(21646423-21646623)
chr7 (26-246)||(21640204-21640423)
chr7 (46-245)||(43504500-43504701)
chr7 (26-246)||(20357028-20357247)
chr7 (26-244)||(39730933-39731153)
chr7 (46-211)||(21811758-21811923)
chr7 (26-257)||(12406627-12406857)
chr7 (70-244)||(1532947-1533121)
chr7 (26-244)||(4873505-4873721)
chr7 (67-243)||(25767327-25767505)
chr7 (26-245)||(48408398-48408619)
chr7 (25-243)||(18414056-18414276)
chr7 (26-244)||(31109070-31109287)
chr7 (26-243)||(18409180-18409399)
chr7 (46-211)||(24023838-24024003)
chr7 (49-211)||(24265699-24265861)
chr7 (46-191)||(2479795-2479940)
chr7 (26-104)||(12397415-12397492)
chr7 (46-191)||(47264102-47264247)
chr7 (132-211)||(24260926-24261005)
chr7 (156-257)||(12397275-12397376)
chr7 (26-75)||(18390514-18390562)
chr7 (46-103)||(44847639-44847696)
chr7 (46-100)||(1532904-1532958)
chr7 (49-211)||(16880476-16880638)
chr7 (49-211)||(16885331-16885493)
chr7 (33-103)||(21983790-21983859)
chr7 (46-103)||(21989454-21989511)
[»] chr3 (63 HSPs)
chr3 (26-258)||(3617034-3617265)
chr3 (26-258)||(4598875-4599107)
chr3 (26-258)||(4601096-4601328)
chr3 (24-258)||(10055803-10056037)
chr3 (26-258)||(10066915-10067147)
chr3 (26-258)||(10210978-10211210)
chr3 (26-258)||(10058027-10058259)
chr3 (26-258)||(10060249-10060481)
chr3 (26-258)||(10062471-10062703)
chr3 (26-258)||(10064693-10064925)
chr3 (26-247)||(10208778-10208999)
chr3 (26-258)||(25637013-25637244)
chr3 (26-258)||(6716085-6716316)
chr3 (26-258)||(54634710-54634941)
chr3 (89-258)||(45282628-45282797)
chr3 (25-244)||(8477785-8478003)
chr3 (26-244)||(40372256-40372473)
chr3 (89-258)||(6718331-6718500)
chr3 (21-242)||(800680-800903)
chr3 (26-245)||(7167664-7167882)
chr3 (46-251)||(27352100-27352305)
chr3 (26-251)||(23198303-23198530)
chr3 (73-245)||(2671111-2671283)
chr3 (26-257)||(22172662-22172891)
chr3 (21-251)||(23200502-23200734)
chr3 (26-244)||(28501152-28501368)
chr3 (26-243)||(1306385-1306604)
chr3 (26-244)||(28503319-28503535)
chr3 (135-240)||(8738631-8738736)
chr3 (135-240)||(9090869-9090974)
chr3 (26-211)||(18656844-18657029)
chr3 (26-245)||(26928080-26928301)
chr3 (26-191)||(37726134-37726299)
chr3 (26-152)||(7782586-7782712)
chr3 (26-191)||(33386137-33386302)
chr3 (26-191)||(37408036-37408200)
chr3 (49-211)||(8512643-8512805)
chr3 (46-211)||(2672438-2672603)
chr3 (49-211)||(8517523-8517685)
chr3 (89-251)||(32143720-32143884)
chr3 (31-211)||(32475887-32476066)
chr3 (31-211)||(32480745-32480924)
chr3 (156-244)||(7782513-7782603)
chr3 (24-211)||(24968520-24968706)
chr3 (26-84)||(6718288-6718345)
chr3 (26-84)||(45282585-45282642)
chr3 (46-211)||(2676594-2676759)
chr3 (46-183)||(27027174-27027311)
chr3 (26-251)||(27453355-27453581)
chr3 (26-84)||(8738542-8738599)
chr3 (26-84)||(9090780-9090837)
chr3 (35-84)||(40734084-40734132)
chr3 (46-86)||(27974453-27974493)
chr3 (33-85)||(36029658-36029709)
chr3 (33-84)||(16264896-16264946)
chr3 (33-84)||(21711768-21711818)
chr3 (89-191)||(27986001-27986103)
chr3 (33-84)||(30709266-30709316)
chr3 (33-84)||(40592252-40592302)
chr3 (26-84)||(16498637-16498694)
chr3 (46-170)||(27038522-27038646)
chr3 (33-77)||(1730916-1730959)
chr3 (46-86)||(27985977-27986017)
[»] chr5 (44 HSPs)
chr5 (26-258)||(16546216-16546447)
chr5 (26-258)||(40379678-40379909)
chr5 (26-258)||(16543994-16544225)
chr5 (26-258)||(40381889-40382120)
chr5 (25-258)||(10592843-10593074)
chr5 (26-258)||(25077706-25077937)
chr5 (26-258)||(25135675-25135906)
chr5 (26-245)||(22536634-22536852)
chr5 (46-244)||(24136266-24136464)
chr5 (26-243)||(18442014-18442233)
chr5 (26-243)||(26177466-26177685)
chr5 (26-245)||(29719965-29720187)
chr5 (26-257)||(27450180-27450409)
chr5 (26-258)||(43599087-43599318)
chr5 (26-258)||(43604579-43604810)
chr5 (26-258)||(43610071-43610302)
chr5 (26-230)||(9789605-9789809)
chr5 (26-257)||(27445337-27445566)
chr5 (50-243)||(26170381-26170576)
chr5 (23-211)||(30631764-30631951)
chr5 (26-211)||(15045096-15045279)
chr5 (26-258)||(29751513-29751724)
chr5 (26-242)||(1456638-1456852)
chr5 (25-245)||(16407640-16407862)
chr5 (33-211)||(28807083-28807260)
chr5 (26-205)||(29722152-29722332)
chr5 (89-258)||(43592642-43592811)
chr5 (26-150)||(29752266-29752390)
chr5 (26-245)||(16409077-16409298)
chr5 (26-205)||(29402550-29402728)
chr5 (33-211)||(2785778-2785955)
chr5 (33-211)||(33768587-33768764)
chr5 (33-211)||(33791719-33791896)
chr5 (25-151)||(15465000-15465126)
chr5 (26-191)||(9352807-9352972)
chr5 (156-244)||(35388079-35388169)
chr5 (46-210)||(37556144-37556308)
chr5 (46-210)||(37560966-37561130)
chr5 (106-251)||(38219803-38219949)
chr5 (46-151)||(36931863-36931968)
chr5 (135-240)||(31180637-31180741)
chr5 (33-84)||(14520796-14520846)
chr5 (17-84)||(31180773-31180839)
chr5 (26-84)||(43592797-43592854)
[»] chr6 (42 HSPs)
chr6 (26-258)||(25420797-25421028)
chr6 (26-258)||(6136316-6136547)
chr6 (26-258)||(16578870-16579101)
chr6 (26-258)||(16616279-16616510)
chr6 (26-258)||(34166666-34166898)
chr6 (26-258)||(16554454-16554685)
chr6 (26-258)||(16631010-16631241)
chr6 (25-258)||(33342456-33342689)
chr6 (34-247)||(13150857-13151070)
chr6 (26-258)||(34164444-34164676)
chr6 (26-258)||(6026834-6027065)
chr6 (21-246)||(27647462-27647687)
chr6 (150-258)||(25421014-25421122)
chr6 (46-244)||(5674249-5674447)
chr6 (89-258)||(16652759-16652928)
chr6 (46-245)||(2171883-2172084)
chr6 (26-241)||(411685-411903)
chr6 (26-194)||(30125018-30125185)
chr6 (25-244)||(3073123-3073344)
chr6 (89-246)||(5266453-5266610)
chr6 (26-243)||(22709426-22709645)
chr6 (26-257)||(11857338-11857567)
chr6 (26-207)||(14741926-14742106)
chr6 (26-244)||(22010189-22010405)
chr6 (26-128)||(34151828-34151929)
chr6 (26-211)||(6438899-6439083)
chr6 (26-152)||(6097860-6097986)
chr6 (89-211)||(28155133-28155255)
chr6 (33-244)||(16839114-16839323)
chr6 (33-211)||(33329940-33330117)
chr6 (33-211)||(33335437-33335614)
chr6 (33-211)||(6005822-6005999)
chr6 (156-245)||(6097786-6097877)
chr6 (135-207)||(14737174-14737246)
chr6 (24-211)||(5343880-5344066)
chr6 (46-191)||(23896792-23896937)
chr6 (26-84)||(16652716-16652773)
chr6 (25-151)||(26253588-26253714)
chr6 (33-84)||(24714938-24714989)
chr6 (26-84)||(14737085-14737142)
chr6 (156-251)||(26253698-26253795)
chr6 (26-78)||(5266602-5266653)
[»] chr4 (32 HSPs)
chr4 (25-258)||(7122266-7122498)
chr4 (26-258)||(5135649-5135881)
chr4 (26-258)||(5137875-5138107)
chr4 (23-258)||(8392979-8393213)
chr4 (26-258)||(8395191-8395422)
chr4 (26-219)||(7124489-7124681)
chr4 (24-244)||(24742360-24742579)
chr4 (25-241)||(31495685-31495903)
chr4 (26-257)||(51520821-51521050)
chr4 (26-243)||(28467977-28468196)
chr4 (26-244)||(13992659-13992879)
chr4 (26-244)||(56141511-56141728)
chr4 (89-245)||(29761040-29761196)
chr4 (33-211)||(45347324-45347501)
chr4 (26-211)||(18856125-18856309)
chr4 (25-244)||(9223898-9224115)
chr4 (26-244)||(9228686-9228902)
chr4 (26-211)||(3814422-3814605)
chr4 (26-211)||(5733062-5733247)
chr4 (67-207)||(18712295-18712435)
chr4 (90-211)||(45356861-45356982)
chr4 (26-145)||(18860403-18860521)
chr4 (156-251)||(31985236-31985333)
chr4 (26-151)||(31985127-31985252)
chr4 (33-87)||(8689044-8689097)
chr4 (33-86)||(5143807-5143859)
chr4 (33-85)||(5268699-5268750)
chr4 (33-151)||(5148177-5148294)
chr4 (33-84)||(16628353-16628403)
chr4 (33-84)||(38151918-38151968)
chr4 (33-83)||(3778116-3778165)
chr4 (46-84)||(16622786-16622824)
[»] scaffold0565 (1 HSPs)
scaffold0565 (26-258)||(2954-3185)
[»] chr2 (23 HSPs)
chr2 (26-258)||(12647736-12647967)
chr2 (26-244)||(9295862-9296079)
chr2 (20-244)||(14291908-14292131)
chr2 (46-243)||(25410047-25410246)
chr2 (25-243)||(6266273-6266493)
chr2 (26-244)||(11098387-11098604)
chr2 (26-243)||(30832921-30833140)
chr2 (26-243)||(3492158-3492377)
chr2 (26-243)||(32289148-32289367)
chr2 (26-244)||(4484703-4484923)
chr2 (26-150)||(32247229-32247352)
chr2 (26-244)||(39811477-39811693)
chr2 (26-251)||(40739230-40739457)
chr2 (33-211)||(19344825-19345002)
chr2 (26-104)||(44310471-44310548)
chr2 (46-211)||(19349683-19349848)
chr2 (89-252)||(28258713-28258877)
chr2 (33-84)||(8389631-8389681)
chr2 (33-84)||(20522788-20522838)
chr2 (33-78)||(33528105-33528149)
chr2 (33-86)||(36757425-36757477)
chr2 (46-86)||(28258689-28258729)
chr2 (155-211)||(32247189-32247245)
[»] chr1 (28 HSPs)
chr1 (26-258)||(44203218-44203449)
chr1 (26-258)||(9036003-9036234)
chr1 (26-258)||(20622589-20622821)
chr1 (25-244)||(40281957-40282179)
chr1 (25-244)||(21053539-21053760)
chr1 (26-211)||(39445898-39446082)
chr1 (25-244)||(9986784-9987005)
chr1 (26-245)||(19360912-19361133)
chr1 (33-211)||(25439406-25439583)
chr1 (26-211)||(44023377-44023561)
chr1 (89-244)||(24793709-24793864)
chr1 (46-245)||(51765010-51765211)
chr1 (33-211)||(25444599-25444776)
chr1 (46-211)||(41391002-41391166)
chr1 (26-243)||(19365768-19365987)
chr1 (26-211)||(1054514-1054698)
chr1 (135-244)||(24786933-24787042)
chr1 (26-252)||(13604095-13604322)
chr1 (26-151)||(24202251-24202376)
chr1 (156-244)||(24202360-24202450)
chr1 (89-211)||(41398657-41398778)
chr1 (132-211)||(43988054-43988133)
chr1 (33-84)||(13598967-13599017)
chr1 (26-84)||(13659840-13659897)
chr1 (46-84)||(21536132-21536170)
chr1 (26-84)||(24793666-24793723)
chr1 (46-84)||(37070334-37070372)
chr1 (46-103)||(26644393-26644450)
[»] scaffold0137 (1 HSPs)
scaffold0137 (26-258)||(5859-6091)
[»] chr8 (29 HSPs)
chr8 (26-258)||(42575677-42575909)
chr8 (26-247)||(15290143-15290364)
chr8 (26-247)||(15470512-15470733)
chr8 (21-258)||(3439083-3439318)
chr8 (89-258)||(25689604-25689772)
chr8 (26-244)||(4759534-4759751)
chr8 (24-244)||(36979797-36980016)
chr8 (21-244)||(30656065-30656287)
chr8 (26-246)||(33037287-33037506)
chr8 (46-244)||(1261434-1261634)
chr8 (25-251)||(18852626-18852851)
chr8 (26-245)||(18870021-18870239)
chr8 (26-230)||(2627318-2627522)
chr8 (25-211)||(10683738-10683923)
chr8 (24-244)||(7289425-7289644)
chr8 (25-211)||(39784324-39784509)
chr8 (23-246)||(6311717-6311938)
chr8 (26-224)||(26288319-26288517)
chr8 (26-224)||(26301576-26301774)
chr8 (26-224)||(26313570-26313768)
chr8 (46-191)||(7412787-7412932)
chr8 (26-207)||(25327664-25327844)
chr8 (33-211)||(35745794-35745971)
chr8 (25-150)||(31042907-31043032)
chr8 (89-246)||(10688661-10688817)
chr8 (26-78)||(25689561-25689612)
chr8 (156-243)||(31043017-31043106)
chr8 (33-84)||(5701959-5702009)
chr8 (26-84)||(10688618-10688675)
[»] scaffold0674 (1 HSPs)
scaffold0674 (26-258)||(4079-4310)
[»] scaffold0491 (2 HSPs)
scaffold0491 (26-245)||(9088-9308)
scaffold0491 (47-244)||(11534-11732)
[»] scaffold0188 (1 HSPs)
scaffold0188 (26-245)||(17431-17652)
[»] scaffold0286 (1 HSPs)
scaffold0286 (46-245)||(21959-22160)
[»] scaffold0464 (1 HSPs)
scaffold0464 (26-211)||(761-945)
[»] scaffold0006 (3 HSPs)
scaffold0006 (26-252)||(132752-132979)
scaffold0006 (33-84)||(6252-6302)
scaffold0006 (26-84)||(149601-149658)
[»] scaffold0355 (1 HSPs)
scaffold0355 (26-207)||(3337-3517)
[»] scaffold1519 (1 HSPs)
scaffold1519 (67-251)||(523-709)
[»] scaffold0135 (1 HSPs)
scaffold0135 (25-244)||(34553-34770)
[»] scaffold0197 (2 HSPs)
scaffold0197 (49-211)||(13806-13968)
scaffold0197 (33-244)||(18671-18880)
[»] scaffold0009 (1 HSPs)
scaffold0009 (49-211)||(176472-176634)
[»] scaffold0259 (1 HSPs)
scaffold0259 (49-244)||(1761-1955)
[»] scaffold0028 (1 HSPs)
scaffold0028 (49-244)||(148466-148660)
[»] scaffold1455 (1 HSPs)
scaffold1455 (26-102)||(1709-1784)
[»] scaffold0665 (2 HSPs)
scaffold0665 (135-207)||(8112-8184)
scaffold0665 (26-84)||(8216-8273)
[»] scaffold0140 (1 HSPs)
scaffold0140 (26-151)||(7911-8036)
[»] scaffold0510 (1 HSPs)
scaffold0510 (46-191)||(1103-1248)
[»] scaffold0087 (1 HSPs)
scaffold0087 (50-191)||(43458-43599)
[»] scaffold0036 (1 HSPs)
scaffold0036 (33-84)||(86153-86204)
[»] scaffold0098 (1 HSPs)
scaffold0098 (26-78)||(45752-45804)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 6592921 - 6592690
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  6592921 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 6592823  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592822 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6592724  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  6592723 gacgcaaatcgtgacacgattgggaaaatcgtga 6592690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 18392781 - 18392549
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggtt 124  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||   | |||||||||||||||||    
T  18392781 ctgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggtt 18392683  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18392682 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18392583  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  18392582 gacgcaaatcgtgacacgattgggaaaatcgtga 18392549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 6595137 - 6594906
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  6595137 tgttgagattgtcttcaaattt-gtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 6595039  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6595038 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6594940  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  6594939 gacgcaaatcgtgacacgattgggaaaatcgtga 6594906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 32060888 - 32060668
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32060888 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 32060790  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060789 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 32060691  T
Q  225 gacgcaaatcgtgacacgattgg 247  Q
    |||||||||||||||||||||||    
T  32060690 gacgcaaatcgtgacacgattgg 32060668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 20343497 - 20343718
Alignment:
Q  23 aactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagg 121  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||  |||| ||| ||||||||||||||||||  ||||||||||||||    
T  20343497 aactgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctagg 20343595  T
Q  122 gttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
     |||| |  |||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20343596 -ttgccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttggg 20343694  T
Q  222 acggacgcaaatcgtgacacgatt 245  Q
      | ||||| ||||||||||||||    
T  20343695 tggtacgcagatcgtgacacgatt 20343718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 1562587 - 1562356
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  |  | |    |  | ||     
T  1562587 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttgtttt 1562489  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
      | ||   |||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1562488 ttgggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacgg 1562389  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||    
T  1562388 acgcaaatcgtgacacgattgggaaaatcgtga 1562356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 18389246 - 18389113
Alignment:
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  18389146 gacgcaaatcgtgacacgattgggaaaatcgtga 18389113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 24789426 - 24789651
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||||  |    
T  24789426 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagt-t 24789523  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| ||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||      
T  24789524 tgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtt 24789623  T
Q  224 ggacgcaaatcgtgacacgattgggaaa 251  Q
    | ||||||||| |||||||||| |||||    
T  24789624 gtacgcaaatcttgacacgatttggaaa 24789651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 2058604 - 2058388
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||  | |||||||||||||  |||    
T  2058604 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggtgccgtgagctagt-ttg 2058507  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    |||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||||  |     
T  2058506 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgt 2058407  T
Q  226 acgcaaatcgtgacacgat 244  Q
    |||||||||||||||||||    
T  2058406 acgcaaatcgtgacacgat 2058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 46 - 244
Target Start/End: Complemental strand, 21646623 - 21646423
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||||||||||||||| ||||||||||||  | ||||| ||||||||||||||||| ||||||||||||| || |||||| |||| |||||||| |    
T  21646623 tttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgac 21646525  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | ||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||||| | |||||||||| |||  ||||||||| ||||    
T  21646524 acgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgttcaaatcgtgccacg 21646425  T
Q  243 at 244  Q
    ||    
T  21646424 at 21646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 246
Target Start/End: Complemental strand, 21640423 - 21640204
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||  ||    
T  21640423 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-tt 21640326  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || |||||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||  ||||||||||||||| | |||||| |||    
T  21640325 gcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacg 21640226  T
Q  225 gacgcaaatcgtgacacgattg 246  Q
    ||||||||||||||||||||||    
T  21640225 gacgcaaatcgtgacacgattg 21640204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 46 - 245
Target Start/End: Complemental strand, 43504701 - 43504500
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |||||| |||| |||||||| |    
T  43504701 tttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgac 43504603  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacg 242  Q
    |||||   || |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| ||||||||| || |||  ||||||||||||    
T  43504602 acgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacagatgcaccaatcgtgacacg 43504503  T
Q  243 att 245  Q
    |||    
T  43504502 att 43504500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 20357028 - 20357247
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  | |||||||||||||  ||    
T  20357028 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-tt 20357125  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || ||||||||||| |||   ||||||||||||||||||||||||||||||||| ||||   ||||||| |     
T  20357126 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtca 20357225  T
Q  225 gacgcaaatcgtgacacgattg 246  Q
    ||||||||||||| ||||||||    
T  20357226 gacgcaaatcgtggcacgattg 20357247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 39730933 - 39731153
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  39730933 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 39731030  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | |   ||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  39731031 tgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 39731130  T
Q  224 ggacg--caaatcgtgacacgat 244  Q
    | |||  | ||||||||||||||    
T  39731131 gtacgtaccaatcgtgacacgat 39731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 21811758 - 21811923
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| | ||||||| || |||||||  ||||||||||||| |  |||||||||||| | | |||||| ||||||||||||||||    
T  21811758 tttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctgagatgccgtgagcaatgtttgcagggtgcaaaatcgtggca 21811857  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||| | || ||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||    
T  21811858 cgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtc 21811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 12406857 - 12406627
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatg-ccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||   || |||||||||||  ||    
T  12406857 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagt-tt 12406760  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||    || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| |     
T  12406759 gcaagacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtcc 12406661  T
Q  225 gacgcaaatcgtgacacga-ttgggaaaatcgtg 257  Q
    |  |||||||||||||||| ||||| ||||||||    
T  12406660 gttgcaaatcgtgacacgatttggggaaatcgtg 12406627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 1532947 - 1533121
Alignment:
Q  70 atcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacg 168  Q
    ||||||||| || ||||| ||||||||| ||||| | | |||| ||||||||  |||||| |||| |||||||| |||||| | || |||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagt-ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacg 1533045  T
Q  169 atcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    || ||||||||| |||||||||||||||||||||||||||||  | |||||||||  || ||||||||||||||||    
T  1533046 attgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgat 1533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 4873721 - 4873505
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||| || || | ||    
T  4873721 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagata-gttt 4873624  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||| ||   |||||||||||||||||||||  ||||||||||| ||| ||||||||| |     
T  4873623 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtc-ttccttgggtcc 4873525  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |  |||||||||||||||||    
T  4873524 gttgcaaatcgtgacacgat 4873505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 25767505 - 25767327
Alignment:
Q  67 gaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgac 165  Q
    ||||||||||||  | ||||| ||||||||||||||||| ||||||||||||| || |||||| |||| |||||||| |||||||| || ||||||||||    
T  25767505 gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgac 25767407  T
Q  166 acgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacga 243  Q
    |||||  | ||||||||||||||||| ||   ||||||||| |||||| ||||| |||| |||  | |||||||||||||    
T  25767406 acgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacgtacgtaccaatcgtgacacga 25767327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 48408398 - 48408619
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  48408398 tgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 48408495  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | |  |||||||||||||||    ||||||||||||||||| ||   |||||||||||||||| |||||  ||    
T  48408496 tgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttgtaac 48408595  T
Q  224 ggacg--caaatcgtgacacgatt 245  Q
    | |||  | |||||||||||||||    
T  48408596 gtacgtaccaatcgtgacacgatt 48408619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 18414276 - 18414056
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| | ||||||||||  |||| ||||||||||| |||||||||||| || ||||| |||||| |||||||| | | ||||||||||| ||     
T  18414276 ctgttgagatttggcttcaaattta-tggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagct-ggt 18414179  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    |||||| | || |||||||| |||||| | || ||||||| |||||||  | ||||||||| ||||||| ||| ||||||||||||||||| ||||| ||    
T  18414178 ttgcagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtga 18414079  T
Q  223 cggacg--caaatcgtgacacga 243  Q
    || |||  | |||||||||||||    
T  18414078 cgtacgtaccaatcgtgacacga 18414056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 31109070 - 31109287
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgcc-gtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||   |||| || ||||| | ||    
T  31109070 tgttgaaattggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagttt 31109168  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||| |||||||||   ||||||||||| ||| | ||||||| |     
T  31109169 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtc-tgccttggggcc 31109267  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |  ||| |||||||||||||    
T  31109268 gttgcagatcgtgacacgat 31109287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 18409399 - 18409180
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||| | ||||||||||| |||||||| ||| || ||||| ||||||||||||||| | | ||||||||||| || |    
T  18409399 tgttgagatttggcttcaaattt-gtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagct-ggtt 18409302  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| ||||| || |||||| | |  |||||||||||||||  | ||||||||| ||||||| ||| ||||||||||||||||| ||||| |||    
T  18409301 tgcagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgac 18409202  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  18409201 gtacgtaccaatcgtgacacga 18409180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 24023838 - 24024003
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgcc-gtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| |||||||||||| |||| ||| |||||| |||||||||   || | | |||||||  ||||||   || ||||||||||    
T  24023838 tttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagt-ttgcaggacgccaaatcgtggc 24023936  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||||||||    
T  24023937 acgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtc 24024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 24265699 - 24265861
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||| ||||||| | ||||||| || |||||||   ||||||||||||   ||| || |||||||| | |||| |   |||||||||||||||||    
T  24265699 gtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaatcgtggcacga 24265798  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  24265799 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 2479940 - 2479795
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacga-tttcggatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    ||||||||||| |||||||| ||||| |||||| |||||||| |||||||||||| ||||  |||||||||||| || |||||| |||  |||||||| |    
T  2479940 tttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagct-ggtttgcagggtgtcaaatcgtgtc 2479842  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||||| |  ||||||| |||||||  | ||||||| | |||||||    
T  2479841 acgattttgtgaaatcgttacacgattttcaaacttgttggttaagt 2479795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 12397492 - 12397415
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc 104  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  12397492 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttc 12397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 47264247 - 47264102
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    ||||||||||||||||| || |||||||||||| |||||||| ||||||||||||||| |  ||| |||||||| || ||| || |||  ||||||||||    
T  47264247 tttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagct-ggtttgtagggtgtcaaatcgtggc 47264149  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    || |||  |  |||||||||||||||  | ||||||||| |||||||    
T  47264148 acaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 24260926 - 24261005
Alignment:
Q  132 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  24260926 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 24261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 12397376 - 12397275
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacga-ttgggaaaatc 254  Q
    |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| | |  |||||||||||||||| ||||| |||||    
T  12397376 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgatttggggaaatc 12397278  T
Q  255 gtg 257  Q
    |||    
T  12397277 gtg 12397275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 18390562 - 18390514
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtg 75  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  18390562 tgttgagattgtcttcaaattt-gtggtttagaagaacagggaaatcgtg 18390514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 44847639 - 44847696
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgattt 103  Q
    ||||||||||  |||||||| |||||||||||| |||||||| |||||||||||||||    
T  44847639 tttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 1532904 - 1532958
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacga 100  Q
    |||||||| ||||||||||| |||||||||||| || ||||| ||||||||||||    
T  1532904 tttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 16880638 - 16880476
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||||||| ||| | ||||||| || |||||||  |||||||||||||   ||| || ||||||   | |||| |   ||||||||||| |||||    
T  16880638 gtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaagcaaaatcgtgtcacga 16880539  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||| ||||||||||   |||||||||| ||||||| ||  |||||||||||||||    
T  16880538 tcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc 16880476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 16885493 - 16885331
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||||||| ||| | ||||||| || |||||||  |||||||||||||   ||| || ||||||   | |||| |   ||||||||||| |||||    
T  16885493 gtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaagcaaaatcgtgtcacga 16885394  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||| ||||||||||   |||||||||| ||||||| ||  |||||||||||||||    
T  16885393 tcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc 16885331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 21983859 - 21983790
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgattt 103  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    |||||||||||||||    
T  21983859 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattt 21983790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 21989511 - 21989454
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgattt 103  Q
    |||||||||||||||||||| |||||||||||| |||||    |||||||||||||||    
T  21989511 tttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 3617034 - 3617265
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3617034 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 3617132  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  3617133 caggggtgcaaa-tcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacg 3617231  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  3617232 gacgcaaatcgtgacacgattgggaaaatcgtga 3617265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 4599107 - 4598875
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  4599107 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttg 4599009  T
Q  126 cagag-tgcaaaatcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4599008 caggggtgcaaa-tcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4598910  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  4598909 ggacgcaaatcgtgacacgattgggaaaatcgtga 4598875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 4601328 - 4601096
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  4601328 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttg 4601230  T
Q  126 cagag-tgcaaaatcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4601229 caggggtgcaaa-tcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 4601131  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  4601130 ggacgcaaatcgtgacacgattgggaaaatcgtga 4601096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 24 - 258
Target Start/End: Original strand, 10055803 - 10056037
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggt 123  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  10055803 actgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggt 10055901  T
Q  124 tgcagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
    ||||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10055902 tgcaggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 10056000  T
Q  222 acggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10056001 acggacgcaaatcgtgacacgattgggcaaatcgtga 10056037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10066915 - 10067147
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10066915 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10067013  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10067014 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10067112  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||| |||||||||    
T  10067113 ggacgcaaatcgtgacacgattgggcaaatcgtga 10067147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10210978 - 10211210
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| ||||||||    
T  10210978 tgttgagattgtctttaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttg 10211076  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| |||||||||||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10211077 caggggtgcaaa-tcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10211175  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  10211176 ggacgcaaatcgtgacacgattgggaaaatcgtga 10211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10058027 - 10058259
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10058027 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10058125  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10058126 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10058224  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | ||||||||||||||||||||||| |||||||||    
T  10058225 gtacgcaaatcgtgacacgattgggcaaatcgtga 10058259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10060249 - 10060481
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10060249 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10060347  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10060348 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10060446  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | ||||||||||||||||||||||| |||||||||    
T  10060447 gtacgcaaatcgtgacacgattgggcaaatcgtga 10060481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10062471 - 10062703
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10062471 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10062569  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10062570 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10062668  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | ||||||||||||||||||||||| |||||||||    
T  10062669 gtacgcaaatcgtgacacgattgggcaaatcgtga 10062703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 10064693 - 10064925
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10064693 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10064791  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10064792 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 10064890  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | ||||||||||||||||||||||| |||||||||    
T  10064891 gtacgcaaatcgtgacacgattgggcaaatcgtga 10064925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 26 - 247
Target Start/End: Original strand, 10208778 - 10208999
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10208778 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 10208876  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10208877 caggggtgcaaa-tcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggac 10208975  T
Q  224 ggacgcaaatcgtgacacgattgg 247  Q
    ||||||||||||||||||||||||    
T  10208976 ggacgcaaatcgtgacacgattgg 10208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 25637013 - 25637244
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||| | ||| | |||||||||||    
T  25637013 tgttgagattgtctttaaattt-gtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgc-gagagctagggtt 25637110  T
Q  125 gcagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||| | |||||| |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25637111 gcaggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 25637209  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  25637210 ggacgcaaatcgtgacacgattgggaaaatcgtga 25637244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 6716085 - 6716316
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  6716085 tgttgagattgtcttgaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 6716182  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  6716183 gcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 6716282  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||  |||||||||||||| ||||||||||||    
T  6716283 tacgcggatcgtgacacgatttggaaaatcgtga 6716316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 54634710 - 54634941
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| || |||||||||||||||  |||||||||||| | ||    
T  54634710 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaag-tt 54634807  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| |||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |    
T  54634808 gcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtgg 54634907  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||||||| |||||||||||||||||||||||    
T  54634908 tacgcaaatcatgacacgattgggaaaatcgtga 54634941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 89 - 258
Target Start/End: Original strand, 45282628 - 45282797
Alignment:
Q  89 atcgtgacacgatttcgga-tgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||||  |||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctagg-ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 45282726  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||| ||||||  | ||||| |||||||||||||||||||||||||||    
T  45282727 aagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgattgggaaaatcgtga 45282797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 8478003 - 8477785
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| ||||| |||||| |||||||| ||||||||||||||||| | |||||||||||||  |    
T  8478003 ctgttgacattggcttcaaattt-gtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-t 8477906  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| |  ||| ||||||||||||||| | || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||      
T  8477905 tgctggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggtt 8477806  T
Q  224 ggacgcaaatcgtgacacgat 244  Q
    | |||||||||||||||||||    
T  8477805 gtacgcaaatcgtgacacgat 8477785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 40372256 - 40372473
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||  ||    
T  40372256 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-tt 40372353  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | ||| || |||    
T  40372354 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacg 40372453  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    ||||||||||||| ||||||    
T  40372454 gacgcaaatcgtgccacgat 40372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 89 - 258
Target Start/End: Original strand, 6718331 - 6718500
Alignment:
Q  89 atcgtgacacgatttcgga-tgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||||  |||||||||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctagg-ttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtt 6718429  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||| ||||||  | ||||  |||||||||||||| | ||||||||||    
T  6718430 aagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgacacgatttgaaaaatcgtga 6718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 800680 - 800903
Alignment:
Q  21 ataactgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagct 118  Q
    ||||||||||||||| |||||| ||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||||    
T  800680 ataactgttgagatttgtcttcgaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct 800778  T
Q  119 agggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttcctt 218  Q
     || |||| | |||| |||||||| |||||||  || |||||||||||||||    ||||||||||||||||| ||| ||||||||| |||||||| |||    
T  800779 -ggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttctt 800877  T
Q  219 gggacggacgca--aatcgtgacacg 242  Q
    |||||| |||||  ||||||||||||    
T  800878 gggacgaacgcaccaatcgtgacacg 800903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 7167882 - 7167664
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||| | ||||||||||| |||||||||||| |||||||| |||||||||| |||||  | |||||||||||||  ||    
T  7167882 tgttgatattggcttcaaattt-gtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagt-tt 7167785  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||||||| | ||||||| |     
T  7167784 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtca 7167685  T
Q  225 gacgcaaatcgtgacacgatt 245  Q
    |||||||||||||||||||||    
T  7167684 gacgcaaatcgtgacacgatt 7167664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 46 - 251
Target Start/End: Original strand, 27352100 - 27352305
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| | |||||||||  ||||||||||| |||||||| ||||||||||||||||  | ||||||||||| |  |||||||   | ||||||||||    
T  27352100 tttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgt-ttgcagaacaccaaatcgtggc 27352198  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    ||||| | || |||||||||||||||   |||||||||||||||| ||||  ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  27352199 acgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacacgat 27352298  T
Q  245 tgggaaa 251  Q
    | |||||    
T  27352299 ttggaaa 27352305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 251
Target Start/End: Complemental strand, 23198530 - 23198303
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||  ||||||||||||||| | ||||||||||||| || |    
T  23198530 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagct-ggtt 23198433  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||||||||||   ||||||||||||||    ||||||||||||||||| |||  |||||||||||||||| ||||| |||    
T  23198432 tgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgac 23198333  T
Q  224 ggacg--caaatcgtgacacgattgggaaa 251  Q
    | |||  | ||||||||||||||| |||||    
T  23198332 gtacgtaccaatcgtgacacgatttggaaa 23198303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 2671111 - 2671283
Alignment:
Q  73 gtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatc 171  Q
    |||||| |||||||| ||||||||| ||||||  | |||||||||||||  ||||||  ||| ||||||||||||||| | || |||||||||||||||     
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 2671209  T
Q  172 gtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgatt 245  Q
      |||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||||||||    
T  2671210 tagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatt 2671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 26 - 257
Target Start/End: Original strand, 22172662 - 22172891
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||| | | ||    
T  22172662 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gttt 22172759  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||||| |||  |||||||||||||||   ||||||  |     
T  22172760 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtc-aaccttggttcc 22172858  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtg 257  Q
    |  |||||||||||||||||| || ||||||||    
T  22172859 gttgcaaatcgtgacacgatttgggaaatcgtg 22172891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 23200734 - 23200502
Alignment:
Q  21 ataactgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagct 118  Q
    |||| |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||| |||||||    
T  23200734 ataaatgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagct 23200636  T
Q  119 agggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttcctt 218  Q
     || |||||| |||| |||||||| ||||||||||   ||||||||||||||    ||||||||||||||||| |||  |||||||||||||||| ||||    
T  23200635 -ggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtacctt 23200537  T
Q  219 gggacggacg--caaatcgtgacacgattgggaaa 251  Q
    | |||  |||  | ||||||||||||||| |||||    
T  23200536 gtgacttacgtaccaatcgtgacacgatttggaaa 23200502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 28501152 - 28501368
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||  ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  28501152 tgttgatattggcttcaaattt-gtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 28501249  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||    | ||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||||| ||||||||||| |||   ||||||| |     
T  28501250 gcaggacaccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtca 28501348  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |||||||||| |||||||||    
T  28501349 gacgcaaatcatgacacgat 28501368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 1306604 - 1306385
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | ||||||||||  |||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||||| | || |||||||| || |    
T  1306604 tgttgagatttggcttcaaattta-tggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagct-ggtt 1306507  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  | ||||||||||||||||| |||  ||||||||| |||||| ||||| |||    
T  1306506 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgac 1306407  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  1306406 gtacgtaccaatcgtgacacga 1306385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 28503319 - 28503535
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||  ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  28503319 tgttgatattggcttcaaattt-gtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 28503416  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    || |   || ||||||||||||||| | || |||||||||||| ||   |||||||||||||||||||||| ||||||||||| |||   ||||||| |     
T  28503417 gctggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtc-aaccttgggtca 28503515  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    ||||||||||||||||||||    
T  28503516 gacgcaaatcgtgacacgat 28503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 8738631 - 8738736
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatc 234  Q
    ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  8738631 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatc 8738730  T
Q  235 gtgaca 240  Q
    ||||||    
T  8738731 gtgaca 8738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 135 - 240
Target Start/End: Original strand, 9090869 - 9090974
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatc 234  Q
    ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  9090869 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatc 9090968  T
Q  235 gtgaca 240  Q
    ||||||    
T  9090969 gtgaca 9090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 18657029 - 18656844
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| || |||||||| |||||| ||||| |||||||| ||||||||||||||||| | ||||||||   | | ||    
T  18657029 tgttgatattggcttcaaattt-gtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagttt 18656931  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||   || |||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  18656930 gcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 18656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 26928080 - 26928301
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||| |  |||||||||||| || |    
T  26928080 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagct-ggtt 26928177  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||| || | |   ||||||||||||||  | ||||||||||||||||| | |  ||||||||| |||||| ||||| |||    
T  26928178 tgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgac 26928277  T
Q  224 ggacgca--aatcgtgacacgatt 245  Q
      ||| |  |||||||||||||||    
T  26928278 ttacgtatcaatcgtgacacgatt 26928301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 191
Target Start/End: Complemental strand, 37726299 - 37726134
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||||||||||||||| |||||||||||| || |||| |||||||||||||||| | ||||||||||||| || |    
T  37726299 tgttgagatttggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagct-ggtt 37726202  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||| |||  |||||||| |||||||| |   ||||||||||||||  | ||||||| | |||||||    
T  37726201 tgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 7782712 - 7782586
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| | |||||||||||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||| || |    
T  7782712 tgttgagatttggcttcaaattt-gtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagct-ggtt 7782615  T
Q  124 tgcagagtgcaaaatcgtggcacgatttg 152  Q
    ||||| |||| |||||||| |||||||||    
T  7782614 tgcagggtgccaaatcgtgacacgatttg 7782586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 33386137 - 33386302
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| |||||  | |||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  33386137 tgttgagatttggcttcaaattt-gtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 33386234  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||| |||| |||||||| |||||||| |   ||||||||||||||  | ||||||||| |||||||    
T  33386235 tgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 37408036 - 37408200
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||||||||||||||  |||||||||||| |||| ||| ||||||||||||||| | | ||||||||||| || |    
T  37408036 tgttgagatttggcttcaaattt-gtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagct-ggtt 37408133  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||| |||  |||||||||||||| ||| | |||||||||||||||  | ||||||| | |||||||    
T  37408134 tgcagggtgtcaaatcgtggcacga-ttgtgtaaatcgtgacacgattttcaaacttgttggttaagt 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 8512805 - 8512643
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||| ||||||| | ||||||| || |||||||   ||||||||||||   ||| || |||||||| | |||| |   |||||||||||||||||    
T  8512805 gtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaatcgtggcacga 8512706  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  8512705 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 2672438 - 2672603
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| | ||||||| || |||||||  |||||||||||||    ||||||| |||| | | |||| |   ||||||||||| ||    
T  2672438 tttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgccgggagccaagtttgctggaagcaaaatcgtgcca 2672537  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  2672538 cgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 2672603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 211
Target Start/End: Complemental strand, 8517685 - 8517523
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||| | ||||||| | ||||||| || |||||||   ||||||||||||   ||| || |||||||| | |||| |   |||||||||||||||||    
T  8517685 gtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaatcgtggcacga 8517586  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  8517585 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 8517523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 251
Target Start/End: Complemental strand, 32143884 - 32143720
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||| | |||||||||||||||  |||||| |||| |||||||| |||||| | |   ||||||||||||||  | |||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtt 32143786  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacgattgggaaa 251  Q
    |||| | |  ||||||||| |||||| ||||| |||| ||| |  ||||||||||||||| |||||    
T  32143785 aagttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttggaaa 32143720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 32476066 - 32475887
Alignment:
Q  31 agattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagag 130  Q
    |||||| |||||||||| ||||||||| ||||||| | ||||||| || ||||| |  |||||||||||||   ||| || |||||| | | |  | ||     
T  32476066 agattggcttcaaattt-gtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttctctgaa 32475968  T
Q  131 tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
     ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  32475967 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 32480924 - 32480745
Alignment:
Q  31 agattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagag 130  Q
    |||||| |||||||||| ||||||||| ||||||| | ||||||| || ||||| |  |||||||||||||   ||| || |||||| | | |  | ||     
T  32480924 agattggcttcaaattt-gtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttctctgaa 32480826  T
Q  131 tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
     ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  32480825 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 32480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 7782603 - 7782513
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgat 244  Q
    |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||  | ||||||||||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacgaacgtaccaatcgtgacacgat 7782513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 24968706 - 24968520
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggt 123  Q
    |||||||  |||| |||||||||  ||||||||||||||||  | ||||||| || ||||| |  |||||||||||||   ||| || |||||| | | |    
T  24968706 actgttggaattgacttcaaatta-gtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtt 24968608  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||| |   |||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||| ||  |||||||||||||||    
T  24968607 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc 24968520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 6718288 - 6718345
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  6718288 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 45282585 - 45282642
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  45282585 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 2676594 - 2676759
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| | ||||||| || |||||||  |||||||||||||    |||| || |||| | | |||| |   ||||||||||| ||    
T  2676594 tttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgtcgggagccaagtttgctggaagcaaaatcgtgcca 2676693  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||| | || |||||||||||||||   |||||||||| |||||| |||  |||||||||||||||    
T  2676694 cgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtc 2676759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 27027311 - 27027174
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||||||||||||||| |||||||||||| |||||    | ||| ||||||||||  | || ||||||  || |||||||||||  ||||||| ||    
T  27027311 tttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtaacacgatttcccaggcagtgagcatggtttgcagagtgctcaatcgtgtca 27027212  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgct 183  Q
    |||||| || ||| |||||||||||  | |||||||||    
T  27027211 cgattttgggaaaacgtgacacgattttcaaacttgct 27027174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 251
Target Start/End: Complemental strand, 27453581 - 27453355
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||| ||| ||||| |||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  27453581 tgttgagatttggcttcaaattt-gtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 27453484  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    || || |||| |||||||| || ||||  |   ||||||||||||||  | ||||||||| ||||||| | |  |||||||  ||||||| ||||| |||    
T  27453483 tgtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgtgac 27453385  T
Q  224 ggacgca--aatcgtgacacgattgggaaa 251  Q
    | ||| |  ||||||||||||||| |||||    
T  27453384 gtacgtatcaatcgtgacacgatttggaaa 27453355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 8738542 - 8738599
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  8738542 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 9090780 - 9090837
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  9090780 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 40734084 - 40734132
Alignment:
Q  35 tgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| |||||    
T  40734084 tgtcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 27974453 - 27974493
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttg 86  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  27974453 tttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 36029709 - 36029658
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgatttt 85  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  36029709 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgatttt 36029658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  16264946 attggcttcaaattt-gtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 21711818 - 21711768
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  21711818 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 27986001 - 27986103
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||| | ||||||||||||| || |||||| |||| |||||||| |||||||  |   ||||||||||||||  | ||||||||| |||    
T  27986001 atcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggtt 27986099  T
Q  188 aagt 191  Q
    ||||    
T  27986100 aagt 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  30709266 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 40592252 - 40592302
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||| | ||||||||||||||||||    
T  40592252 attggcttcaaattt-gtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 16498637 - 16498694
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  16498637 tgttgatattggcttcaaattt-gtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 170
Target Start/End: Complemental strand, 27038646 - 27038522
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||||||||| ||||| |||||||||||| |||||    | ||||||||||||||  | || ||||||  || |||||| ||||  |||| || ||    
T  27038646 tttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgatttcccaggcagtgagcatggtttgcagggtgctcaatcatgtca 27038547  T
Q  146 cga-tttgggaaaatcgtgacacgat 170  Q
    ||| ||||||||||| ||||||||||    
T  27038546 cgattttgggaaaat-gtgacacgat 27038522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgac 77  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||    
T  1730916 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 27985977 - 27986017
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttg 86  Q
    |||||||||||||| ||||| |||||||||||| |||||||    
T  27985977 tttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 16546216 - 16546447
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||   | ||||||||||||||||||    
T  16546216 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 16546314  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16546315 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16546414  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||    
T  16546415 acgcaaatcgtgacacgattgggaaaatcgtga 16546447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 40379678 - 40379909
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||| ||||||||||||||   | ||||||||||||||||||    
T  40379678 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 40379776  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40379777 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40379876  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||    
T  40379877 acgcaaatcgtgacacgattgggaaaatcgtga 40379909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 16543994 - 16544225
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||   | ||| |||||||||||||     
T  16543994 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgctgtgagctagggtta 16544092  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16544093 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 16544192  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||    
T  16544193 acgcaaatcgtgacacgattgggaaaatcgtga 16544225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 40381889 - 40382120
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||| || |||||||| ||||||||||||||   | ||||||||||||||||||    
T  40381889 tgttgagattgtcttcaaattt-gtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 40381987  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40381988 cagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 40382087  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||    
T  40382088 acgcaaatcgtgacacgattgggaaaatcgtga 40382120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 10592843 - 10593074
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggtt 124  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||| ||    
T  10592843 ctgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgagatagg-tt 10592940  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||  |    
T  10592941 gcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtgg 10593040  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  10593041 tacgcagatcgtgacacgatttgggaaatcgtga 10593074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 25077706 - 25077937
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||| |||||   | ||||||||||||||||||    
T  25077706 tgttgagtttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttg 25077804  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
     || | |||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25077805 taggggtgcaaa-tcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25077903  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  25077904 gacgcaaatcgtgacacgattgggaaaatcgtga 25077937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 25135675 - 25135906
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||| |||||   | ||||||||||||||||||    
T  25135675 tgttgagtttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttg 25135773  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
     || | |||||| ||||| |||||||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135774 taggggtgcaaa-tcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25135872  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  25135873 gacgcaaatcgtgacacgattgggaaaatcgtga 25135906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 22536852 - 22536634
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||||||||||| ||    
T  22536852 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctagg-tt 22536755  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||||||||||||| |||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  22536754 gcagggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 22536655  T
Q  225 gacgcaaatcgtgacacgatt 245  Q
     || || ||||||||||||||    
T  22536654 tacacagatcgtgacacgatt 22536634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 244
Target Start/End: Complemental strand, 24136464 - 24136266
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||  |||||||||||| || ||||| |||||||||| |||||| |||||||||||||||  |||||| |||| |||||||| |    
T  24136464 tttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgac 24136366  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    ||||| | || |||||||||||||||  | ||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  24136365 acgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgacacgat 24136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 18442233 - 18442014
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||  ||||||||||||| || |    
T  18442233 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtt 18442136  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||||  || |||||||||||||||    ||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  18442135 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggac 18442036  T
Q  224 ggacgca--aatcgtgacacga 243  Q
    | |||||  |||||||||||||    
T  18442035 gaacgcaccaatcgtgacacga 18442014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 26177466 - 26177685
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  26177466 tgttgagatttggcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 26177563  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||||||   || |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  26177564 tgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 26177663  T
Q  224 ggacgca--aatcgtgacacga 243  Q
    |||||||  |||||||||||||    
T  26177664 ggacgcaccaatcgtgacacga 26177685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 29719965 - 29720187
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||| |      
T  29719965 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-gtc 29720062  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    ||||| |||| |||||||| |||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||    
T  29720063 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 29720162  T
Q  223 cggacgca--aatcgtgacacgatt 245  Q
    |||| |||  |||||||||||||||    
T  29720163 cggatgcaccaatcgtgacacgatt 29720187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 27450409 - 27450180
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  27450409 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 27450312  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |     
T  27450311 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtca 27450213  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtg 257  Q
    ||||||||||||||||||||| || ||||||||    
T  27450212 gacgcaaatcgtgacacgatttgggaaatcgtg 27450180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 43599318 - 43599087
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc--ggatgccgtgagctagggt 123  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||  |||||||||||||||  ||  ||||||||||||  |    
T  43599318 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-t 43599221  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |    
T  43599220 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43599122  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||||||||||||||||||| || |||||||||    
T  43599121 agacgcaaatcgtgacacgatttgggaaatcgtga 43599087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 43604810 - 43604579
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc--ggatgccgtgagctagggt 123  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||  |||||||||||||||  ||  ||||||||||||  |    
T  43604810 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-t 43604713  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |    
T  43604712 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43604614  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||||||||||||||||||| || |||||||||    
T  43604613 agacgcaaatcgtgacacgatttgggaaatcgtga 43604579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 43610302 - 43610071
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc--ggatgccgtgagctagggt 123  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||  |||||||||||||||  ||  ||||||||||||  |    
T  43610302 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-t 43610205  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |    
T  43610204 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 43610106  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||||||||||||||||||| || |||||||||    
T  43610105 agacgcaaatcgtgacacgatttgggaaatcgtga 43610071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 9789809 - 9789605
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  9789809 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 9789712  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||||  || |||||||||||||||    ||||||||||||||||| ||| |||||||||||||||||| |||| |||    
T  9789711 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttcttgcgac 9789612  T
Q  224 ggacgca 230  Q
    | |||||    
T  9789611 gaacgca 9789605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 27445566 - 27445337
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| | ||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  27445566 tgttgatattggcttcaaattt-gtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 27445469  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |     
T  27445468 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtca 27445370  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtg 257  Q
    ||||||||||||||||||||| || ||||||||    
T  27445369 gacgcaaatcgtgacacgatttgggaaatcgtg 27445337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 243
Target Start/End: Original strand, 26170381 - 26170576
Alignment:
Q  50 tggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||||| || |||||| |||| |||||||| |||||    
T  26170381 tggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgacacga 26170479  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacga 243  Q
    |   || |||||||||||  ||    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  26170480 tcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcgtgacacga 26170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 23 - 211
Target Start/End: Complemental strand, 30631951 - 30631764
Alignment:
Q  23 aactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagg 121  Q
    ||||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||| ||     
T  30631951 aactgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagt 30631853  T
Q  122 gttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
     ||||||   || |||||||| |||||||| || |||||||||||||||   |||||||||||||||||||||  |||||||||||||||    
T  30631852 -ttgcaggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 30631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 15045279 - 15045096
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| || |||||||||||||| |||||||||||| |||||||| |||||||||||||||  |||||||||||| | | |||    
T  15045279 tgttgatattggcttcaaattt-gtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttg 15045182  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||   || ||||||||||||||| | || |||||||||||||||   ||||||||||| |||||||||  |||||||||||||||    
T  15045181 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtc 15045096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 29751724 - 29751513
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| ||||| |||  |||||||||||| | |||||||||||| |||    
T  29751724 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagcta-ggt 29751627  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||||                     |||||||||||||||||||||||||||||||||||||||| | |||||||      
T  29751626 tgcagggtgccaaatcgtgacacgatt---------------------gtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtt 29751548  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | |||||||||||||||||||| ||||||||||||    
T  29751547 gtacgcaaatcgtgacacgatttggaaaatcgtga 29751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 1456638 - 1456852
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  1456638 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 1456735  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
     |||   || ||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||| ||||||||||| ||| | ||||||| |     
T  1456736 acaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtca 1456834  T
Q  225 gacgcaaatcgtgacacg 242  Q
    || |||||||||||||||    
T  1456835 gatgcaaatcgtgacacg 1456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 245
Target Start/End: Original strand, 16407640 - 16407862
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||  ||||||||||||||| | ||||||||||||| ||     
T  16407640 ctgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagct-ggt 16407737  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    |||||| |||| |||||||| |||||| | |   ||||||||||||||    ||||||||||||||||| ||| |||||||||| |||||| ||||||||    
T  16407738 ttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttggga 16407837  T
Q  223 cggacg--caaatcgtgacacgatt 245  Q
    || |||  | |||||||||||||||    
T  16407838 cgtacgctccaatcgtgacacgatt 16407862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 28807083 - 28807260
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| ||||||||||  |||| ||||||||||| | ||||||| || |||||||  ||||||||||||| |  |||||||||||| | | |||||| |||    
T  28807083 attggcttcaaattta-tggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtg 28807181  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || ||||||||||||||||  |||||||| | ||||||||||  |||||||||||||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc 28807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 29722152 - 29722332
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| |      
T  29722152 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagcta-gtc 29722249  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttgataagga 205  Q
    ||||  |||| |||||||| |||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  29722250 tgcatggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 89 - 258
Target Start/End: Complemental strand, 43592811 - 43592642
Alignment:
Q  89 atcgtgacacgatttc--ggatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgt 186  Q
    ||||||||||||||||  ||  ||||||||||||  ||||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgt 43592713  T
Q  187 taagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||| ||||||||||||||| | ||||||| | ||||||||||||||||||||| || |||||||||    
T  43592712 taagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtga 43592642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 29752390 - 29752266
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||| |||    
T  29752390 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagcta-ggt 29752293  T
Q  124 tgcagagtgcaaaatcgtggcacgatt 150  Q
    ||||| |||| ||||||||||||||||    
T  29752292 tgcagggtgccaaatcgtggcacgatt 29752266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 16409077 - 16409298
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||| ||||||||||||||| | |||| |||||||| || |    
T  16409077 tgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagct-ggtt 16409174  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||  |||| |||| ||| |||||| | |   ||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| | |||||||    
T  16409175 tgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggac 16409274  T
Q  224 ggacg--caaatcgtgacacgatt 245  Q
    | |||  | |||||||||||||||    
T  16409275 gtacgctccaatcgtgacacgatt 16409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 205
Target Start/End: Original strand, 29402550 - 29402728
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||| |||||||||  |  ||| ||||||| | ||    
T  29402550 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagcta-gttt 29402647  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagga 205  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||    
T  29402648 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 2785955 - 2785778
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  2785955 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 2785857  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  2785856 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 2785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 33768764 - 33768587
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  33768764 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 33768666  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  33768665 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 33791896 - 33791719
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  33791896 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 33791798  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  33791797 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33791719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 15465126 - 15465000
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||||||||||||||||||| | ||||||||||||| ||     
T  15465126 ctgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggt 15465029  T
Q  123 ttgcagagtgcaaaatcgtggcacgattt 151  Q
    |||||| |||| |||||||| ||||||||    
T  15465028 ttgcagggtgccaaatcgtgacacgattt 15465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 191
Target Start/End: Original strand, 9352807 - 9352972
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| |||||||| |||||||| |||||||||||  |||| ||| ||||||||||||||| |  |||||||||||| || |    
T  9352807 tgttgagatttggcttcaaattt-gtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagct-ggtt 9352904  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||| |||  ||||||||||||||||  |  |||||||||||||||  | ||||||||| |||||||    
T  9352905 tgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 35388169 - 35388079
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgat 244  Q
    |||| ||||||||||  | ||||||||||||||||||||||||||||||||||||| | |||||||||| |||  ||||||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgat 35388079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 37556144 - 37556308
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| | |||||||||| ||||| |  ||||||||||||| |  |||||||||||| | | ||  |  | |  |||||||||||    
T  37556144 tttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatctgagatgccgtgagccaagttttgatggaggcaaatcgtggca 37556243  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggt 210  Q
    |||| | || |||| |||||||||||  |||||||||| ||||||||||  ||||||||||||||    
T  37556244 cgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 210
Target Start/End: Original strand, 37560966 - 37561130
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| | |||||||||| |||||    ||||||||||||| |  |||||||||||| | | ||  |  | |  |||||||||||    
T  37560966 tttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatctgagatgccgtgagccaagttttgatggaggcaaatcgtggca 37561065  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggt 210  Q
    |||| | || ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||    
T  37561066 cgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 251
Target Start/End: Complemental strand, 38219949 - 38219803
Alignment:
Q  106 gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagga 205  Q
    ||||||||||||| || ||| || |||| |||||||| |||||| | || |||| ||||||||||  | ||||||||| ||||||| ||| |||||||||    
T  38219949 gatgccgtgagct-ggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataagga 38219851  T
Q  206 ctggtcgttccttgggacggacg--caaatcgtgacacgattgggaaa 251  Q
    |||||||| ||||| |||| |||  | ||||||||||||||| |||||    
T  38219850 ctggtcgtaccttgtgacgtacgttccaatcgtgacacgatttggaaa 38219803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 36931863 - 36931968
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||||||||||||||| |||||||||||| || ||||| |||||| |||||||| | |||| |||||||| || |||||| |||| |||||||| |    
T  36931863 tttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagct-ggtttgcagggtgccaaatcgtgac 36931961  T
Q  145 acgattt 151  Q
    |||||||    
T  36931962 acgattt 36931968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 31180741 - 31180637
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatc 234  Q
    ||||||||||||||| | || |||||||||||||||   || |||| |||||||||||||  |||||||||||||||   ||||||| | ||||||||||    
T  31180741 aaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtc-aaccttgggtcagacgcaaatc 31180643  T
Q  235 gtgaca 240  Q
    ||||||    
T  31180642 gtgaca 31180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 14520846 - 14520796
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  14520846 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 31180839 - 31180773
Alignment:
Q  17 atatataactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||  |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  31180839 atatatatatgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 43592854 - 43592797
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  43592854 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 182; Significance: 2e-98; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 25420797 - 25421028
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||    
T  25420797 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcggatgccgtgagctagggttg 25420895  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25420896 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 25420994  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||| |||||||||||||||||    
T  25420995 gacgcaaatcgtgacatgattgggaaaatcgtga 25421028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 6136547 - 6136316
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  6136547 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttg 6136449  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 225  Q
    ||| |   |||||||||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6136448 caggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgg 6136349  T
Q  226 acgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | |||||||||||||| ||||||||||||||||    
T  6136348 aagcaaatcgtgacacaattgggaaaatcgtga 6136316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 16579101 - 16578870
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  16579101 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 16579004  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  16579003 gcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16578904  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  16578903 tacgcagatcgtgacacgatttgggaaatcgtga 16578870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 16616279 - 16616510
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  16616279 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 16616376  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  16616377 gcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16616476  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  16616477 tacgcagatcgtgacacgatttgggaaatcgtga 16616510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 34166666 - 34166898
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  34166666 tgttgagtttgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 34166764  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34166765 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34166863  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | ||||||||||||||||||||||| |||||||||    
T  34166864 gtacgcaaatcgtgacacgattgggcaaatcgtga 34166898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 16554454 - 16554685
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  16554454 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 16554551  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
     ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  16554552 acagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16554651  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  16554652 tacgcagatcgtgacacgatttgggaaatcgtga 16554685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 16631010 - 16631241
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||    
T  16631010 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 16631107  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
     ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  16631108 acagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgg 16631207  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  16631208 tacgcagatcgtgacacgatttgggaaatcgtga 16631241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 25 - 258
Target Start/End: Complemental strand, 33342689 - 33342456
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggtt 124  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||    
T  33342689 ctgttgagattgtcttcaaattt-gtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcggatgccgtgagctagggtt 33342591  T
Q  125 gcagag-tgcaaaatcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    |||| | |||||| ||||||||||||||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33342590 gcaggggtgcaaa-tcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 33342492  T
Q  223 cggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||| |||||||||    
T  33342491 cggacgcaaatcgtgacacgattgggcaaatcgtga 33342456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 34 - 247
Target Start/End: Original strand, 13150857 - 13151070
Alignment:
Q  34 ttgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagag-tg 132  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||    
T  13150857 ttgtcttcaaattt-gtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 13150955  T
Q  133 caaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 231  Q
    |||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13150956 caaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 13151054  T
Q  232 atcgtgacacgattgg 247  Q
    ||||||||||||||||    
T  13151055 atcgtgacacgattgg 13151070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 34164444 - 34164676
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||    
T  34164444 tgttgagtttgtcttcaaattt-gtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttg 34164542  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34164543 caggggtgcaaa-tcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 34164641  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||  |||||||||    
T  34164642 ggacgcaaatcgtgacacgattggacaaatcgtga 34164676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 6026834 - 6027065
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||  || || |||||||||||||| | ||| | |||||||||||    
T  6026834 tgttgagattgtcttcaaattt-gtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgc-gagagctagggtt 6026931  T
Q  125 gcagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||| | |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6026932 gcaggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 6027030  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  6027031 ggacgcaaatcgtgacacgattgggaaaatcgtga 6027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 246
Target Start/End: Original strand, 27647462 - 27647687
Alignment:
Q  21 ataactgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagct 118  Q
    |||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||||  |||||||||||    
T  27647462 ataactgttgagttttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagct 27647560  T
Q  119 agggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttcctt 218  Q
    ||| |||||| |||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  27647561 agg-ttgcagggtgcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttctt 27647659  T
Q  219 gggacggacgcaaatcgtgacacgattg 246  Q
    |||  | ||||| |||||||||||||||    
T  27647660 gggtggtacgcagatcgtgacacgattg 27647687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 25421014 - 25421122
Alignment:
Q  150 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattggga 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25421014 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattggga 25421113  T
Q  250 aaatcgtga 258  Q
    |||||||||    
T  25421114 aaatcgtga 25421122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 46 - 244
Target Start/End: Original strand, 5674249 - 5674447
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| ||||||||||||||| ||||| ||||||||| ||||| | ||||||||||||| || |||||| |||| |||||||| |    
T  5674249 tttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgac 5674347  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    || || | || |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||    
T  5674348 acaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtgacacgat 5674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 89 - 258
Target Start/End: Original strand, 16652759 - 16652928
Alignment:
Q  89 atcgtgacacgatttcgga-tgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||||  |||||||||||||| ||| || ||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctagg-ttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtt 16652857  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||| ||||||  | ||||| |||||||||||||| || |||||||||    
T  16652858 aagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttgggaaatcgtga 16652928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 245
Target Start/End: Complemental strand, 2172084 - 2171883
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||| || |||||| |||| |||||||| |    
T  2172084 tttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgac 2171986  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | || ||||||||||||||| || ||||||||||||||||| |||  ||||||||| |||||| ||||| |||| |||  | ||||||||||||    
T  2171985 acgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacg 2171886  T
Q  243 att 245  Q
    |||    
T  2171885 att 2171883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 26 - 241
Target Start/End: Original strand, 411685 - 411903
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||| ||||||||||||||| || ||||| || ||||||| |||||| | |||||||||||||  |    
T  411685 tgttgagatttgtcttcaaattt-gtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtct 411783  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
     |||| |||| |||||||| |||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||    
T  411784 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 411882  T
Q  223 cggacgca--aatcgtgacac 241  Q
    |||| |||  |||||||||||    
T  411883 cggatgcaccaatcgtgacac 411903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 30125018 - 30125185
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||| | ||    
T  30125018 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gttt 30125115  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatc 194  Q
    ||||   || ||||||||||||||||| || |||||||||||||||   |||||||||||||||||||||    
T  30125116 gcaggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 244
Target Start/End: Complemental strand, 3073344 - 3073123
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||||||| ||     
T  3073344 ctgttgagatttgtcttcaaattt-gtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggt 3073247  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
     | ||| |||| |||||||| |||||||   | |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||| | ||||||||    
T  3073246 ctacagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttggga 3073147  T
Q  223 cggacgca--aatcgtgacacgat 244  Q
     ||| |||  |||||| |||||||    
T  3073146 tggatgcactaatcgttacacgat 3073123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 5266610 - 5266453
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||| | |||||||||||||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||| ||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatt 5266512  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattg 246  Q
    |||||||||||||||||||||||| | |||||  |||||||||||||||||||||||||    
T  5266511 aagtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgattg 5266453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 22709645 - 22709426
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||| ||||| || ||||| | ||||||||||||| | |||||| |||||| || |    
T  22709645 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagct-ggtt 22709548  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  | ||||||||||||||||| ||| ||||||||||||||||| ||||| |||    
T  22709547 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgac 22709448  T
Q  224 ggac--gcaaatcgtgacacga 243  Q
    | ||   |||||||||||||||    
T  22709447 gtacatacaaatcgtgacacga 22709426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 11857567 - 11857338
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||| | ||    
T  11857567 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gttt 11857470  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||||||| |  ||||||||||| |||   ||||||| |     
T  11857469 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtc-aaccttgggtcc 11857371  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtg 257  Q
    |  |||||||||||||||||| || ||||||||    
T  11857370 gttgcaaatcgtgacacgatttgggaaatcgtg 11857338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 14741926 - 14742106
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  | ||||||||| | ||    
T  14741926 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagcta-gttt 14742023  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    ||||   || ||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||||  |||||||||||    
T  14742024 gcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 14742106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 22010189 - 22010405
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||| || || | ||    
T  22010189 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagtta-gttt 22010286  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| |     
T  22010287 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtcc 22010385  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |  |||||||||||||||||    
T  22010386 gttgcaaatcgtgacacgat 22010405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 128
Target Start/End: Original strand, 34151828 - 34151929
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||||||||||||| ||||||||    
T  34151828 tgttgagtttgtcttcaaattt-gtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttg 34151926  T
Q  126 cag 128  Q
    |||    
T  34151927 cag 34151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 6439083 - 6438899
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| ||||||||||  |||| ||||||||||  |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | |||    
T  6439083 tgttgaaattggcttcaaattta-tggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttg 6438985  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | |  |||| |||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6438984 ctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 6438899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 152
Target Start/End: Complemental strand, 6097986 - 6097860
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  6097986 tgttgagatttgtcttcaaattt-gtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 6097889  T
Q  124 tgcagagtgcaaaatcgtggcacgatttg 152  Q
    ||||| |||| |||||||| |||||||||    
T  6097888 tgcagggtgctaaatcgtgacacgatttg 6097860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 28155133 - 28155255
Alignment:
Q  89 atcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 188  Q
    ||||||||||||| |  |||||||||||| | | |||||| |||||||||||||||||||| | || ||||||||||||||||  |||||||||| ||||    
T  28155133 atcgtgacacgatctgagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggtta 28155232  T
Q  189 agtatccttgataaggactggtc 211  Q
    ||||||  |||||||||||||||    
T  28155233 agtatctctgataaggactggtc 28155255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 244
Target Start/End: Complemental strand, 16839323 - 16839114
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  16839323 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 16839225  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 232  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||||| |  ||| |    
T  16839224 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttgggaccgttgcaga 16839126  T
Q  233 tcgtgacacgat 244  Q
    ||||||||||||    
T  16839125 tcgtgacacgat 16839114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 33329940 - 33330117
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  33329940 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 33330038  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  33330039 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33330117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 33335437 - 33335614
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||  |  ||||| |  |||||||||||||    |||||||||||| | | |||| |   |    
T  33335437 attggcttcaaattt-gtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaag 33335535  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  33335536 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 33335614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 6005999 - 6005822
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||| ||||| | ||||||| |  ||||| |  |||||||||||||    |||||| ||||| | | |||| |   |    
T  6005999 attggcttcaaattt-gtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccatgagccaagtttgctggaag 6005901  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6005900 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 6005822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 245
Target Start/End: Complemental strand, 6097877 - 6097786
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacgatt 245  Q
    |||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| ||| |||||| |||||  |||||||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgatt 6097786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 14737174 - 14737246
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    ||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||||  |||||||||||    
T  14737174 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 14737246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 5344066 - 5343880
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggt 123  Q
    |||||||  |||| |||||||||| ||||||||| ||||||| ||||||||| || ||||| |  |||||||||||||   ||| |  |||||| | |      
T  5344066 actgttggaattggcttcaaattt-gtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgatcagggaggaagtgagccaagtc 5343968  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | ||  ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  5343967 ttctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 5343880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 23896937 - 23896792
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    ||||||||||| ||||||||  ||||||||||| |||||||| ||||||||||||||| |  ||  |||||| | || |||||| |||  |||||||||     
T  23896937 tttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgag-ttggtttgcagggtgtcaaatcgtggt 23896839  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  23896838 acgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 16652716 - 16652773
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||||    
T  16652716 tgttgagattgtcttcaaattt-gtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 26253588 - 26253714
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| || |||||||| |||||||||||| || ||||| ||||||||| ||||| | ||| ||||||| || |     
T  26253588 ctgttgagatttgtcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagata-gt 26253685  T
Q  123 ttgcagagtgcaaaatcgtggcacgattt 151  Q
    | |||| |||| |||||||| ||||||||    
T  26253686 tagcagggtgccaaatcgtgacacgattt 26253714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 24714989 - 24714938
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||| |||||    
T  24714989 attggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 14737085 - 14737142
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  14737085 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 26253698 - 26253795
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacgattgggaaa 251  Q
    |||||||||||||||  | ||||||||| ||||||| | |  |||||||||||||||| | ||| |||| ||| |  ||||||||||||||| |||||    
T  26253698 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtactttgtgacgtacgtatcaatcgtgacacgatttggaaa 26253795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 5266653 - 5266602
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgaca 78  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||||||||||||    
T  5266653 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgaca 5266602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 7e-92; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 25 - 258
Target Start/End: Original strand, 7122266 - 7122498
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggtt 124  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  7122266 ctgttgagtttgtcttcaaattt-gtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggtt 7122364  T
Q  125 gcagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||| | |||||| |||||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7122365 gcaggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 7122463  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    |||||||||||||||||||||||||||||||||||    
T  7122464 ggacgcaaatcgtgacacgattgggaaaatcgtga 7122498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 5135649 - 5135881
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  5135649 tgttgagattgtcttcaaattt-gtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 5135747  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5135748 caggggtgcaaa-tcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5135846  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||  |||||||||    
T  5135847 ggacgcaaatcgtgacacgattggacaaatcgtga 5135881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 5137875 - 5138107
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  5137875 tgttgagattgtcttcaaattt-gtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttg 5137973  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5137974 caggggtgcaaa-tcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggac 5138072  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||  |||||||||    
T  5138073 ggacgcaaatcgtgacacgattggacaaatcgtga 5138107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 23 - 258
Target Start/End: Original strand, 8392979 - 8393213
Alignment:
Q  23 aactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctaggg 122  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8392979 aactgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctaggg 8393077  T
Q  123 ttgcagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
    |||||| | |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||| || ||||||    
T  8393078 ttgcaggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttggg 8393176  T
Q  222 acggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
      | ||||| |||||||||||||| || |||||||||    
T  8393177 tggtacgcagatcgtgacacgatttgggaaatcgtga 8393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 8395191 - 8395422
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8395191 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 8395289  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| |||| ||||||||||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||| ||||||  |    
T  8395290 caggggtgcaaa-tcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtgg 8395388  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||| || |||||||||    
T  8395389 tacgcagatcgtgacacgatttgggaaatcgtga 8395422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 26 - 219
Target Start/End: Original strand, 7124489 - 7124681
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  7124489 tgttgagtttgtcttcaaattt-gtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 7124587  T
Q  126 ca-gagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttg 219  Q
    || | |||| ||||||||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  7124588 caggggtgc-aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttg 7124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 24 - 244
Target Start/End: Complemental strand, 24742579 - 24742360
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    |||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||      
T  24742579 actgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt- 24742482  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    ||||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | ||| || |    
T  24742481 ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaa 24742382  T
Q  223 cggacgcaaatcgtgacacgat 244  Q
    ||||||||||||||| ||||||    
T  24742381 cggacgcaaatcgtgccacgat 24742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 31495903 - 31495685
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||| ||     
T  31495903 ctgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggt 31495806  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    |||||| |||| |||||||| |||||||  || |||||||||||||||    ||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  31495805 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttggga 31495706  T
Q  223 cggacgca--aatcgtgacac 241  Q
    || |||||  |||||||||||    
T  31495705 cgaacgcaccaatcgtgacac 31495685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 51521050 - 51520821
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||||  ||    
T  51521050 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-tt 51520953  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || ||||| |||||||||   |||||||||||||||||||||| |||||||||||| || | ||||||| |     
T  51520952 gcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtca 51520854  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtg 257  Q
    ||||||||||||||||||||| || ||||||||    
T  51520853 gacgcaaatcgtgacacgatttgggaaatcgtg 51520821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 28467977 - 28468196
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||| ||||||||| | ||||||||||||| || |    
T  28467977 tgttgagatttggcttcaaattt-gtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagct-ggtt 28468074  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | ||||||||||||||||||  | ||||||||||||||||| ||  ||||||||||||||||| ||||| |||    
T  28468075 tgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgac 28468174  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  |||||||||||||||    
T  28468175 gtacgtacaaatcgtgacacga 28468196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 13992879 - 13992659
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||| |||| |||||||| || |    
T  13992879 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagct-ggtt 13992782  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||||| || |||||||||||||||  | ||||||||||||||||| | | ||||||||||||||| | ||||| |||    
T  13992781 tgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgac 13992682  T
Q  224 ggacgca--aatcgtgacacgat 244  Q
    | ||| |  ||||||||||||||    
T  13992681 gtacgtatcaatcgtgacacgat 13992659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 56141511 - 56141728
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||| | |  | ||||||||||  ||    
T  56141511 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagt-tt 56141608  T
Q  125 gcagagtgc-aaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||   || |||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||||||| | ||||||| |    
T  56141609 gcaggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtc 56141707  T
Q  224 ggacgcaaatcgtgacacgat 244  Q
     || |||||||||||||||||    
T  56141708 agatgcaaatcgtgacacgat 56141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 245
Target Start/End: Complemental strand, 29761196 - 29761040
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||| | |||||||||||||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 29761098  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgatt 245  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||||| |||||||    
T  29761097 aagtatccttgataaggactggtcataccttggtacggacgcaaatcgtggcacgatt 29761040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 45347324 - 45347501
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||| ||||||||||  |||||||||||| |||||||| ||||||||||||||   |||||||||||| | | |||| |  ||    
T  45347324 attggcttcaaattt-gtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattagagatgccgtgagccaagtttgctggatg 45347422  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  45347423 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 45347501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 18856309 - 18856125
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | |||    
T  18856309 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttg 18856211  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | |  ||||||||||||||| ||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  18856210 ctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 18856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 9223898 - 9224115
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 123  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||| | |    
T  9223898 ctgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtt 9223995  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| |    
T  9223996 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtc 9224094  T
Q  224 ggacgcaaatcgtgacacgat 244  Q
     |  ||| |||||||||||||    
T  9224095 cgttgcagatcgtgacacgat 9224115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 9228686 - 9228902
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |  ||||||||||  | ||    
T  9228686 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagct-cgttt 9228783  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| |     
T  9228784 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtcc 9228882  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |  ||| |||||||||||||    
T  9228883 gttgcagatcgtgacacgat 9228902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 3814605 - 3814422
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatg-ccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||   || |||| ||| | | ||    
T  3814605 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagttt 3814508  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||    || |||||||| ||||||||||| |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  3814507 gcaagacgccaaatcgtgtcacgatttggg-aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 3814422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 5733247 - 5733062
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| || |||||||| |||||| ||||| |||||||| ||||||||||||||||| | ||||||||   | | ||    
T  5733247 tgttgatattggcttcaaattt-gtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagttt 5733149  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||   || |||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  5733148 gcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 5733062  T

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Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 18712295 - 18712435
Alignment:
Q  67 gaaatcgtgacatgattttggtatcgtgacacgatttcggatg-ccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgac 165  Q
    |||||||||||| |||||||| ||||||||||||||||   || |||||||||||  ||||||   || ||||||||||||||| | || ||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgac 18712393  T
Q  166 acgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    |||||   |||||||||||||||||||||  |||||||||||    
T  18712394 acgattcagaaacttgctcgttaagtatcactgataaggact 18712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 45356861 - 45356982
Alignment:
Q  90 tcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaa 189  Q
    ||||||||||||||  |||||||||||| | | |||| |  ||||||||||||||||||| | || |||||||||||||||   |||||||||| |||||    
T  45356861 tcgtgacacgatttgagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 45356960  T
Q  190 gtatccttgataaggactggtc 211  Q
    |||||  |||||||||||||||    
T  45356961 gtatcactgataaggactggtc 45356982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 18860521 - 18860403
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | |||    
T  18860521 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttg 18860423  T
Q  126 cagagtgcaaaatcgtggca 145  Q
    | |  |||||||||||||||    
T  18860422 ctggatgcaaaatcgtggca 18860403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 31985236 - 31985333
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacgattgggaaa 251  Q
    |||||||||||||||  | ||||||||| ||||||| | |  |||||||||||||||| ||||| |||| |||||  ||||||||||||||| |||||    
T  31985236 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatttggaaa 31985333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 31985127 - 31985252
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||| | || |||||||| |||||||||||| || ||||| ||||||||||||||| | ||| |||||||||| | |    
T  31985127 tgttgagatttggcttcaaattt-gtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagcta-gtt 31985224  T
Q  124 tgcagagtgcaaaatcgtggcacgattt 151  Q
     |||| |||| |||||||| ||||||||    
T  31985225 agcagggtgccaaatcgtgacacgattt 31985252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 8689044 - 8689097
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttgg 87  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  8689044 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 5143859 - 5143807
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttg 86  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||||    
T  5143859 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 5268699 - 5268750
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgatttt 85  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||||    
T  5268699 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 151
Target Start/End: Complemental strand, 5148294 - 5148177
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagt 131  Q
    |||| |||||||||| |||||||||||||| || |||||||||||| ||||||   | ||||||||||||| |  ||| ||||||||| | |||||| ||    
T  5148294 attggcttcaaattt-gtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagcta-gtttgcagggt 5148197  T
Q  132 gcaaaatcgtggcacgattt 151  Q
    |   ||||||||||||||||    
T  5148196 gaccaatcgtggcacgattt 5148177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  16628353 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  38151918 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgatt 83  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| ||||    
T  3778165 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 16622786 - 16622824
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  16622786 tttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 3185 - 2954
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3185 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 3087  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| |||||||||||||  || ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3086 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacg 2988  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  2987 gacgcaaatcgtgacacgattgggaaaatcgtga 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 3e-91; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 12647967 - 12647736
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  12647967 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttg 12647869  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| |||||||||||||  || ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647868 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 12647770  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  12647769 gacgcaaatcgtgacacgattgggaaaatcgtga 12647736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 9295862 - 9296079
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  | |||||||||||||  ||    
T  9295862 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-tt 9295959  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||  ||| ||||||||||||||| | || |||||||||||||||   ||||||||||| |||||||||||||||||||||||||| | ||||||| ||    
T  9295960 gcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcg 9296059  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    ||||||||||||||||||||    
T  9296060 gacgcaaatcgtgacacgat 9296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 244
Target Start/End: Complemental strand, 14292131 - 14291908
Alignment:
Q  20 tataactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagct 118  Q
    |||| ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||| ||| | |||||||||||    
T  14292131 tatatctgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagct 14292033  T
Q  119 agggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttcctt 218  Q
    ||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||||||| |  ||||||||||||||| | ||||    
T  14292032 agt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcatacctt 14291934  T
Q  219 gggacggacgcaaatcgtgacacgat 244  Q
    |||  | |||||||||||||||||||    
T  14291933 gggttgtacgcaaatcgtgacacgat 14291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 46 - 243
Target Start/End: Complemental strand, 25410246 - 25410047
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||| | || |||||| |||| |||||||| |    
T  25410246 tttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagat-ggtttgcagggtgccaaatcgtgac 25410148  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | || |||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||  | ||||||||||||    
T  25410147 acgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacgtacgtaccaatcgtgacacg 25410048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 6266273 - 6266493
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| |||||||||| ||||||||||||| || ||||  |||||||||| |||||| ||||||||||||| ||     
T  6266273 ctgttgagatttgtcttcaaattt-gtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagct-ggt 6266370  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    |||||| |||| |||||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| ||||||||| |||||||| |||||||    
T  6266371 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttcttggga 6266470  T
Q  223 cggacgca--aatcgtgacacga 243  Q
    || |||||  |||||||||||||    
T  6266471 cgaacgcaccaatcgtgacacga 6266493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 11098387 - 11098604
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| || |||||||||||||  | |||||||||||||  ||    
T  11098387 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagt-tt 11098484  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||||||||   |||||||  |    
T  11098485 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttg 11098584  T
Q  225 gacgcaaatcgtgacacgat 244  Q
     |||||||||||||||||||    
T  11098585 tacgcaaatcgtgacacgat 11098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 30832921 - 30833140
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| ||||||||||||||| ||||  ||||||||||||||||| ||||||||||||| || |    
T  30832921 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtt 30833018  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  | ||||||||||||||||| |||  ||||||||| |||||| ||||| |||    
T  30833019 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgac 30833118  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  30833119 gtacgtaccaatcgtgacacga 30833140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 3492377 - 3492158
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| ||||| |||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  3492377 tgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 3492280  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  ||||||||||||||||||| |||  ||||||||| |||||| ||||| |||    
T  3492279 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgac 3492180  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  3492179 gtacgtaccaatcgtgacacga 3492158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 32289148 - 32289367
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  32289148 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 32289245  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| ||||| || |||||| | |   ||||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  32289246 tgcagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 32289345  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  32289346 gtacgctccaatcgtgacacga 32289367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 244
Target Start/End: Complemental strand, 4484923 - 4484703
Alignment:
Q  26 tgttgagattgt-cttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||  |||||||||||||| | |    
T  4484923 tgttgagattttacttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagcta-gtt 4484826  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| |     ||||||||||||||    ||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  4484825 tgcagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggac 4484726  T
Q  224 ggacg--caaatcgtgacacgat 244  Q
    | |||  | ||||||||||||||    
T  4484725 gtacgtaccaatcgtgacacgat 4484703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 32247352 - 32247229
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||  |||||||||||| | | |||    
T  32247352 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttg 32247254  T
Q  126 cagagtgcaaaatcgtggcacgatt 150  Q
    | |  ||||||||||||||||||||    
T  32247253 ctggatgcaaaatcgtggcacgatt 32247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 39811477 - 39811693
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatg-ccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||   || |||| ||| | | ||    
T  39811477 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagttt 39811574  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  ||||||||||| ||| | ||||||| |     
T  39811575 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtc-tgccttggggcc 39811673  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    |  ||| |||||||||||||    
T  39811674 gttgcagatcgtgacacgat 39811693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 251
Target Start/End: Complemental strand, 40739457 - 40739230
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| |||||||||||  ||||||||||| || ||||| ||||||||||||||| |  |||||||||||| || |    
T  40739457 tgttgagatttggcttcaaattt-gtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagct-ggtt 40739360  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | |   ||| ||||||| ||  | ||||||||||||||||| | |  ||||||||| |||||| ||||| |||    
T  40739359 tgcagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgac 40739260  T
Q  224 ggacgca--aatcgtgacacgattgggaaa 251  Q
    | ||| |  ||||||||||||||| |||||    
T  40739259 gtacgtatcaatcgtgacacgatttggaaa 40739230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 19345002 - 19344825
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  ||||||| |||||    |||||||||||| | | |||| |   |    
T  19345002 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgatcggagatgccgtgagccaagtttgctggaag 19344904  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||| ||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  19344903 caaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 19344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 44310471 - 44310548
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc 104  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||    
T  44310471 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 19349848 - 19349683
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||||||||||||||| | ||||||| |   |||| |  |||||||||||||    |||||||||||| | | |||| |   ||||||||||||||    
T  19349848 tttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgctggaagcaaaatcgtggca 19349749  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||| | || |||||||||||||||   |||||||| | ||||||||||  |||||||||||||||    
T  19349748 cgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtc 19349683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 252
Target Start/End: Original strand, 28258713 - 28258877
Alignment:
Q  89 atcgtgacacgatttcgga-tgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||| | | ||||||||||| || |||||| |||  |||||||||||| |||| |  |||||||||||||||  | ||||||||| |||    
T  28258713 atcgtgacacgattttgtaatgccgtgagct-ggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggtt 28258811  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacgattgggaaaa 252  Q
    |||| | |  |||||||  ||||||| ||||||| || |||||  ||||||| ||||||| ||||||    
T  28258812 aagttttcaggataagg-ttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatttggaaaa 28258877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  8389631 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 20522838 - 20522788
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  20522838 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacataattt 20522788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 33528105 - 33528149
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgaca 78  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||    
T  33528105 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgaca 33528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 36757425 - 36757477
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttg 86  Q
    |||| |||||||||| |||||||||||||||||  ||||||||||| |||||||    
T  36757425 attggcttcaaattt-gtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 28258689 - 28258729
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttg 86  Q
    |||||||||||||| ||||| |||||||||||| |||||||    
T  28258689 tttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 32247245 - 32247189
Alignment:
Q  155 aaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||| ||||||   |||||||||||||||||||||  |||||| ||||||||    
T  32247245 aaaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtc 32247189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 3e-91; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 44203218 - 44203449
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||||   | ||||||||||||||||||    
T  44203218 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagctagggttg 44203316  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203317 caggggtgcaaa-tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 44203415  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  44203416 gacgcaaatcgtgacacgattgggaaaatcgtga 44203449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 9036003 - 9036234
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagctagggtt 124  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| ||    
T  9036003 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-tt 9036100  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    |||| ||||||| ||||| ||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       
T  9036101 gcagggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgt 9036200  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
     ||||| |||||||||||||||||||||||||||    
T  9036201 tacgcagatcgtgacacgattgggaaaatcgtga 9036234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 20622821 - 20622589
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | |||||||||||||  |    
T  20622821 tgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct 20622723  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
     |||| |||| |||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||      
T  20622722 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtg 20622624  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    | |||||||||||| || |||| ||||||||||||    
T  20622623 gtacgcaaatcgtggcatgatttggaaaatcgtga 20622589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 40281957 - 40282179
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||| || ||||| ||||||||||||||| | | |||||||||||| ||    
T  40281957 ctgttgagatttgtcttcaaattt-gtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagcta-gg 40282054  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
    |||||| |||| |||||||| |||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| | |||||||    
T  40282055 ttgcagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 40282154  T
Q  222 acggacgca--aatcgtgacacgat 244  Q
    ||||| |||  ||||||||||||||    
T  40282155 acggatgcaccaatcgtgacacgat 40282179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 21053539 - 21053760
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| |      
T  21053539 ctgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagcta-gaa 21053636  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    ||||  |||| |||||||| |||||||  || ||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| | ||||| ||    
T  21053637 tgcaaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgaga 21053736  T
Q  223 cggacgca--aatcgtgacacgat 244  Q
    |||| |||  ||||||||||||||    
T  21053737 cggatgcaccaatcgtgacacgat 21053760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 39446082 - 39445898
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||  |||||||||||| | | |||    
T  39446082 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttg 39445984  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||   || ||||||||||||||| | || ||||| ||||||||||  |||||||||||||||||||||  |||||||||||||||    
T  39445983 caggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtc 39445898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 9986784 - 9987005
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| || ||||  ||||| ||||||||||| | ||||||||||| ||     
T  9986784 ctgttgagatttgtcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagct-ggt 9986881  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
     ||||| |||| |||||||| |||||||| || |||||||||||||||    ||||||||||||||||| ||| | ||||||||||||| | ||||||||    
T  9986882 ctgcagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttggga 9986981  T
Q  223 cggacgca--aatcgtgacacgat 244  Q
    |||| |||  ||||||||||||||    
T  9986982 cggatgcaccaatcgtgacacgat 9987005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 19360912 - 19361133
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||||||||||||||||||| | ||||||||||||| || |    
T  19360912 tgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtt 19361009  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  | ||||||||||||||||| |||  ||||||||| |||||| ||||| |||    
T  19361010 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgac 19361109  T
Q  224 ggacg--caaatcgtgacacgatt 245  Q
    | |||  | |||||||||||||||    
T  19361110 gtacgtaccaatcgtgacacgatt 19361133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 25439406 - 25439583
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||| ||||||||||| | |||||||||| ||||| |  |||||||||||||||  |||||||||||| | | ||||||  ||    
T  25439406 attggcttcaaattt-gtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgcaggatg 25439504  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || ||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||    
T  25439505 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtc 25439583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 44023377 - 44023561
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | |||    
T  44023377 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttg 44023475  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | |  ||||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  44023476 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtc 44023561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 24793709 - 24793864
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||| | |||||||||||||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 24793807  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    ||||||||||||||||||||||||   ||||||| | ||||||||||||||||||||    
T  24793808 aagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgat 24793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 46 - 245
Target Start/End: Original strand, 51765010 - 51765211
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| |||||||||||| || ||||  ||||||||||||||||| ||||||||||||| || |||||| |||| |||||||| |    
T  51765010 tttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgtgac 51765108  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | |   ||||||||||||||    ||||||||||||||||| ||| ||||||||||||||| | ||||| |||| |||  | ||||||||||||    
T  51765109 acgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgacgtacgtaccaatcgtgacacg 51765208  T
Q  243 att 245  Q
    |||    
T  51765209 att 51765211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 25444599 - 25444776
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||| ||||||||||| | |||||||||| ||||| |  |||||||||||||||  |||||||||||| | | ||| ||  ||    
T  25444599 attggcttcaaattt-gtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgtaggatg 25444697  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || ||||||||||||||||  |||||||| | ||||||||||  |||||||||||||||    
T  25444698 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtc 25444776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 41391166 - 41391002
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    |||||||| ||||||||||| |||||||||||| |||||||| |||||||||||||||  |||||||||||| | | ||||||   || |||||||||||    
T  41391166 tttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgccaaatcgtggca 41391068  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||| | || ||||||||||| |||   ||||||||||| |||||||||  |||||||||||||||    
T  41391067 cgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtc 41391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 19365768 - 19365987
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||||| || |    
T  19365768 tgttgagatttgacttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtt 19365865  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || |||||||||||||||  | ||||||||||||||| | |||  ||||||||| |||||| | ||| |||    
T  19365866 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacaggtcgtacattgtgac 19365965  T
Q  224 ggacg--caaatcgtgacacga 243  Q
    | |||  | |||||||||||||    
T  19365966 gtacgtaccaatcgtgacacga 19365987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 1054514 - 1054698
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| ||||||||| || |||||||| ||||||| ||||||   | |||||||||| | | |||    
T  1054514 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattggaggtgccgtgagccaagtttg 1054612  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||   || ||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  1054613 caggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtc 1054698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 135 - 244
Target Start/End: Original strand, 24786933 - 24787042
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatc 234  Q
    ||||||||||||||| | || |||||||||||||||   ||||||||||||||||||||||||||||||||||||||   ||||||| | ||||||||||    
T  24786933 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatc 24787032  T
Q  235 gtgacacgat 244  Q
    ||||||||||    
T  24787033 gtgacacgat 24787042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 13604095 - 13604322
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||| |||||||| | |||| |||||||| || |    
T  13604095 tgttgagatttgtcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagct-ggtt 13604192  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||  |||||||| |||||||| |   |||||||||| |||  | ||||||||| ||||||| | |  |||||||  ||||||| ||||||| |    
T  13604193 tgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgggtc 13604291  T
Q  224 ggacgca--aatcgtgacacgattgggaaaa 252  Q
    | ||| |  ||||||||||||||| ||||||    
T  13604292 gtacgtatcaatcgtgacacgatttggaaaa 13604322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 24202251 - 24202376
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  24202251 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 24202348  T
Q  124 tgcagagtgcaaaatcgtggcacgattt 151  Q
    ||||| |||| |||||||| ||||||||    
T  24202349 tgcagggtgccaaatcgtgacacgattt 24202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 24202360 - 24202450
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgat 244  Q
    |||||||||||||||  | ||||||||||||||||||||||||||||||||||||| |  ||||||||| |||  ||||||||||||||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 41398778 - 41398657
Alignment:
Q  89 atcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 188  Q
    |||||||||||||||  |||||||||||| ||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||| |||    
T  41398778 atcgtgacacgatttgagatgccgtgagccagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  189 agtatccttgataaggactggtc 211  Q
    |||||| ||||||||||||||||    
T  41398679 agtatcattgataaggactggtc 41398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 43988054 - 43988133
Alignment:
Q  132 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  43988054 gcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 43988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 13599017 - 13598967
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  13599017 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 13659897 - 13659840
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  13659897 tgttgatattggcttcaaattt-gtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 21536132 - 21536170
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  21536132 tttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 24793666 - 24793723
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  24793666 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 37070372 - 37070334
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  37070372 tttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 26644393 - 26644450
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgattt 103  Q
    |||||||||||||||||||| | |||||||| | |||||||  ||||| |||||||||    
T  26644393 tttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 26 - 258
Target Start/End: Original strand, 5859 - 6091
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||  |||||||||||||   | ||||||||||||||||||    
T  5859 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattggaggtgccgtgagctagggttg 5957  T
Q  126 cagagtgcaaaatcgtggcacgatt-tgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| ||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5958 cagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 6057  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||||    
T  6058 gacgcaaatcgtgacacgattgggaaaatcgtga 6091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 42575909 - 42575677
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||    
T  42575909 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttg 42575811  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42575810 caggggtgcaaa-tcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggac 42575712  T
Q  224 ggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||| |||||||||    
T  42575711 ggacgcaaatcgtgacacgattgggcaaatcgtga 42575677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 26 - 247
Target Start/End: Original strand, 15290143 - 15290364
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||| ||||||||    
T  15290143 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttg 15290241  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15290242 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15290340  T
Q  224 ggacgcaaatcgtgacacgattgg 247  Q
    ||||||||||||||||||||||||    
T  15290341 ggacgcaaatcgtgacacgattgg 15290364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 26 - 247
Target Start/End: Original strand, 15470512 - 15470733
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || | ||||||||||||||||||||||| ||||||||    
T  15470512 tgttgagattgtcttcaaattt-gtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttg 15470610  T
Q  126 cagag-tgcaaaatcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||| | |||||| ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15470611 caggggtgcaaa-tcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggac 15470709  T
Q  224 ggacgcaaatcgtgacacgattgg 247  Q
    ||||||||||||||||||||||||    
T  15470710 ggacgcaaatcgtgacacgattgg 15470733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 21 - 258
Target Start/End: Original strand, 3439083 - 3439318
Alignment:
Q  21 ataactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgga-tgccgtgagcta 119  Q
    |||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||  ||||||||||||    
T  3439083 ataaatgttgagattgtcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagcta 3439181  T
Q  120 gggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttg 219  Q
    || |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3439182 gg-ttgcagggtgcaaaatcgtgacacgatttgggaaa-tcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttg 3439279  T
Q  220 ggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||  | ||||| |||||| ||||||||||||||||||||    
T  3439280 ggtggtacgcatatcgtggcacgattgggaaaatcgtga 3439318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 89 - 258
Target Start/End: Original strand, 25689604 - 25689772
Alignment:
Q  89 atcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 188  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||  || ||||||| |||||||||||||||||||||||||    
T  25689604 atcgtgacacgatttcgggtgccgtgagctagg-ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  189 agtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||||||||||||||||||   | || |||||||||||||||||| |||||||||||    
T  25689703 agtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgacacgattgagaaaatcgtga 25689772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 4759534 - 4759751
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||  ||||||||||||||||| | |||||||||||||  ||    
T  4759534 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagt-tt 4759631  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||| |||    
T  4759632 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacg 4759731  T
Q  225 gacgcaaatcgtgacacgat 244  Q
    ||||||||||||||||||||    
T  4759732 gacgcaaatcgtgacacgat 4759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 244
Target Start/End: Complemental strand, 36980016 - 36979797
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    |||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||      
T  36980016 actgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt- 36979919  T
Q  123 ttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggga 222  Q
    ||||||   || ||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||||  ||||||||||||||| | |||||||     
T  36979918 ttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggt 36979819  T
Q  223 cggacgcaaatcgtgacacgat 244  Q
     | |||||||||||||||||||    
T  36979818 tgtacgcaaatcgtgacacgat 36979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 21 - 244
Target Start/End: Complemental strand, 30656287 - 30656065
Alignment:
Q  21 ataactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagcta 119  Q
    |||| |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  | ||||||||||||    
T  30656287 ataagtgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta 30656189  T
Q  120 gggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttg 219  Q
    |  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||||||||||||||||||||||||||   |||||    
T  30656188 gt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 30656090  T
Q  220 ggacggacgcaaatcgtgacacgat 244  Q
    || | ||||||||||||||||||||    
T  30656089 ggtcagacgcaaatcgtgacacgat 30656065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 33037287 - 33037506
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||| | |||||||||||||  ||    
T  33037287 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-tt 33037384  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || |||||||| |||||| | || |||||||||||||||   ||||||||||| |||||||||  ||||||||||||||| | |||||| |||    
T  33037385 gcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacg 33037484  T
Q  225 gacgcaaatcgtgacacgattg 246  Q
    ||||||||||||||||||||||    
T  33037485 gacgcaaatcgtgacacgattg 33037506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 46 - 244
Target Start/End: Original strand, 1261434 - 1261634
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||||||||||||||  ||||||| |||| || ||||| ||||||||||||||||| |||||||||||||||  |||||| |||| |||||||| |    
T  1261434 tttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgac 1261532  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | || |||||||||||||||  | ||||||||||||||||||||||||||||||||||||| | |||||||||  |||  ||||||||||||||    
T  1261533 acgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgttcaaatcgtgacacg 1261632  T
Q  243 at 244  Q
    ||    
T  1261633 at 1261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 25 - 251
Target Start/End: Original strand, 18852626 - 18852851
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||| | |||||||| ||||||||||||||||  | |||||||||||||  |    
T  18852626 ctgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-t 18852723  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||||||| | ||||||| |    
T  18852724 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtc 18852823  T
Q  224 ggacgcaaatcgtgacacgattgggaaa 251  Q
     |||||| |||||||||||||| |||||    
T  18852824 agacgcagatcgtgacacgatttggaaa 18852851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 18870021 - 18870239
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  |||| ||||||||||  ||    
T  18870021 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagt-tt 18870118  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||||||| | ||||||| |     
T  18870119 gcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtca 18870218  T
Q  225 gacgcaaatcgtgacacgatt 245  Q
    |||||| ||||||||||||||    
T  18870219 gacgcagatcgtgacacgatt 18870239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 230
Target Start/End: Original strand, 2627318 - 2627522
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| |||||||||||||||||||||||| || ||||| ||||||||||||||||| ||| ||||||||| || |    
T  2627318 tgttgagatttggcttcaaattt-gtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagct-ggtt 2627415  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||  |||| |||||||| |||||||| || |||||||||||||||    ||||||||||||||||| ||| ||||||||| |||||||| |||| |||    
T  2627416 tgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttcttgtgac 2627515  T
Q  224 ggacgca 230  Q
    | |||||    
T  2627516 gtacgca 2627522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 10683738 - 10683923
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||  | |||||||||||||  |    
T  10683738 ctgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-t 10683835  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    |||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||||||||    
T  10683836 tgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtc 10683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 244
Target Start/End: Original strand, 7289425 - 7289644
Alignment:
Q  24 actgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc--ggatgccgtgagctagg 121  Q
    |||||||| |||| |||||||||| ||||| ||||||||||| ||||| |||||| |||||||| ||||||||||||||||  ||  ||| ||||||||     
T  7289425 actgttgatattgacttcaaattt-gtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagt 7289523  T
Q  122 gttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
     ||||||   || |||||||| |||||| | ||||||||||||||||||   |||||||||||||||||||||| ||||||||||| ||| | ||||||     
T  7289524 -ttgcaggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttgga 7289621  T
Q  222 acggacgcaaatcgtgacacgat 244  Q
     | || |||||||||||||||||    
T  7289622 tcagatgcaaatcgtgacacgat 7289644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 211
Target Start/End: Original strand, 39784324 - 39784509
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggtt 124  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | ||    
T  39784324 ctgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagttt 39784422  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    || |  ||||||||||||||||||| | || |||||||||||||||   |||||||| | ||||||||||  |||||||||||||||    
T  39784423 gctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtc 39784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 6311938 - 6311717
Alignment:
Q  23 aactgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagg 121  Q
    ||||||||  |||| |||||||||| ||||| ||||||||||| |||||| ||||| |||||||| ||||||||||||||||  | |||||||||||| |    
T  6311938 aactgttgttattggcttcaaattt-gtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcta-g 6311841  T
Q  122 gttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggg 221  Q
     ||||||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  | ||||||||| |||   |||||||    
T  6311840 tttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtc-aaccttggg 6311742  T
Q  222 acggacgcaaatcgtgacacgattg 246  Q
     | || |||||||||||||||||||    
T  6311741 tcagatgcaaatcgtgacacgattg 6311717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 26288517 - 26288319
Alignment:
Q  26 tgttgaga-ttgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||| ||| |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||| ||||| | ||||||||||||| || |    
T  26288517 tgttgagacttgacttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtt 26288420  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||| || | || |||||||||||| ||  | ||||||||||||||||| ||| ||||||||||||||||| ||||| |||    
T  26288419 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgac 26288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 26301774 - 26301576
Alignment:
Q  26 tgttgaga-ttgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||| ||| |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||| ||||| | ||||||||||||| || |    
T  26301774 tgttgagacttgacttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtt 26301677  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||| || | || |||||||||||| ||  | ||||||||||||||||| ||| ||||||||||||||||| ||||| |||    
T  26301676 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgac 26301577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 26313768 - 26313570
Alignment:
Q  26 tgttgaga-ttgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||| ||| |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||| ||||| | ||||||||||||| || |    
T  26313768 tgttgagacttgacttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtt 26313671  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| ||| || | || |||||||||||| ||  | ||||||||||||||||| ||| ||||||||||||||||| ||||| |||    
T  26313670 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgac 26313571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 7412932 - 7412787
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatt-tcggatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||||||| |   |||||||||||| || |||||| |||  |||||||||     
T  7412932 tttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagct-ggtttgcagggtgtcaaatcgtggt 7412834  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    || |||| |  |||||||||||||||  | ||||||||| |||||||    
T  7412833 acaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 25327664 - 25327844
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| ||||||||  ||||| |||||||||  |  || |||||||| | ||    
T  25327664 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagcta-gttt 25327761  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    ||||   || ||||| ||||||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||||    
T  25327762 gcaggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 25327844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 35745971 - 35745794
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |  ||||| |  |||||||||||||    |||||||||||| | | |||  |   |    
T  35745971 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttgttggaag 35745873  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    ||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  35745872 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtc 35745794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 150
Target Start/End: Original strand, 31042907 - 31043032
Alignment:
Q  25 ctgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 122  Q
    ||||||||||| | |||||||||| ||||| |||||||| || |||||||||||| || ||||| ||||||||||||||||| | ||||||||||| ||     
T  31042907 ctgttgagatttgacttcaaattt-gtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-ggt 31043004  T
Q  123 ttgcagagtgcaaaatcgtggcacgatt 150  Q
    |||||| |||| |||||||| |||||||    
T  31043005 ttgcagggtgccaaatcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 10688661 - 10688817
Alignment:
Q  89 atcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 187  Q
    ||||||||||||||||  | |||||||||||||  ||||||   || ||||||||||||||| | || |||||||||||||||   ||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 10688759  T
Q  188 aagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattg 246  Q
    |||||||  | ||||||||| |||   ||||||| | || |||||||||||||||||||    
T  10688760 aagtatcactaataaggacttgtc-aaccttgggtcagatgcaaatcgtgacacgattg 10688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 25689561 - 25689612
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgaca 78  Q
    |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  25689561 tgttgagattgtcttcaaattt-gtggtctggaagaacagagaaatcgtgaca 25689612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 31043017 - 31043106
Alignment:
Q  156 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacga 243  Q
    |||||||||||||||  | ||||||||||||||||| |||  ||||||||| |||||| ||||| |||| |||  | |||||||||||||    
T  31043017 aaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacga 31043106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 5701959 - 5702009
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  5701959 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 10688618 - 10688675
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  10688618 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 4310 - 4079
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||| || |||||||| |||||||||||||||  | ||||||||||||||||||    
T  4310 tgttgagattgtcttcaaattt-gtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttg 4212  T
Q  126 cagag-tgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 224  Q
    ||| | |||||| |||||||||||||  || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4211 caggggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 4113  T
Q  225 gacgcaaatcgtgacacgattgggaaaatcgtga 258  Q
    ||||||||||||||||| ||||||||||||||||    
T  4112 gacgcaaatcgtgacacaattgggaaaatcgtga 4079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 26 - 245
Target Start/End: Complemental strand, 9308 - 9088
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  9308 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 9211  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| || ||||||||||| ||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  9210 tgcagggtgccaaatcgtgacatgatttgggaaa-tcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 9112  T
Q  224 ggacgca--aatcgtgacacgatt 245  Q
    | |||||  |||||||||||||||    
T  9111 gtacgcaccaatcgtgacacgatt 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 47 - 244
Target Start/End: Complemental strand, 11732 - 11534
Alignment:
Q  47 ttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggca 145  Q
    ||||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||  ||||||||||||| || |||||| |||| |||||||| ||    
T  11732 ttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtttgcagggtgccaaatcgtgaca 11634  T
Q  146 cgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgca--aatcgtgacacga 243  Q
    |||||||||||| ||||||||||||    ||||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||  |||||||||||||    
T  11633 cgatttgggaaa-tcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtgacacga 11535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 245
Target Start/End: Original strand, 17431 - 17652
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| ||||||||||| |||||||||||| || ||||| ||||||||||||||||| ||||||||||||| || |    
T  17431 tgttgagatttggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtt 17528  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||| |||||||| |||||| | || ||||||||||| |||  | ||||||||||||||||||||||||||||||| ||||||| ||||| |||    
T  17529 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgac 17628  T
Q  224 ggacg--caaatcgtgacacgatt 245  Q
    | |||  | |||||||||||||||    
T  17629 gtacgttccaatcgtgacacgatt 17652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 245
Target Start/End: Original strand, 21959 - 22160
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||| ||||||||||||||||| | |||||||||||||  ||||||   || |||||||| |    
T  21959 tttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtgac 22057  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacg 242  Q
    ||||| | || ||||||||||||||| || ||||||||||||||||||||  |||||||||| |||||| ||||| |||| |||  | ||||||||||||    
T  22058 acgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacg 22157  T
Q  243 att 245  Q
    |||    
T  22158 att 22160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 945 - 761
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttg 125  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||   | |||||||||| | | |||    
T  945 tgttgaaattggcttcaaattt-gtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttg 847  T
Q  126 cagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | |  ||||||||||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  846 ctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 252
Target Start/End: Original strand, 132752 - 132979
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||| |||||||| | |||| |||||||| || |    
T  132752 tgttgagatttgtcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagct-ggtt 132849  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||| |||  |||||||| |||||||| |   |||||||||| |||  | ||||||||| ||||||| | |  |||||||  ||||||| ||||||| |    
T  132850 tgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgggtc 132948  T
Q  224 ggacgca--aatcgtgacacgattgggaaaa 252  Q
    | ||| |  ||||||||||||||| ||||||    
T  132949 gtacgtatcaatcgtgacacgatttggaaaa 132979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 6302 - 6252
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||| |||||    
T  6302 attggcttcaaattt-gtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 149658 - 149601
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||||||||  ||||| ||||||||||||||||||    
T  149658 tgttgatattggcttcaaattt-gtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 3337 - 3517
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatg-ccgtgagctagggtt 124  Q
    |||||| |||| |||||||||| ||||| |||||||| || |||||||||||| |||||||  ||||||||||||||||   || |||||||||||  ||    
T  3337 tgttgatattggcttcaaattt-gtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagt-tt 3434  T
Q  125 gcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    | ||   || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  |||||||||||    
T  3435 gaaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggact 3517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 67 - 251
Target Start/End: Original strand, 523 - 709
Alignment:
Q  67 gaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgac 165  Q
    |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||  |||||| |||| |||||||| |||||| | |   |||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgac 621  T
Q  166 acgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg--caaatcgtgacacgattgggaaa 251  Q
    |||||  | ||| ||||||||||||| |||  |||| ||||||||||| ||||| |||| |||  | ||| ||||||||||| |||||    
T  622 acgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacgtacgtaccaattgtgacacgatttggaaa 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 244
Target Start/End: Original strand, 34553 - 34770
Alignment:
Q  25 ctgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttc-ggatgccgtgagctagggt 123  Q
    ||||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| |||||||||| |||||  |  ||||| || |  | |    
T  34553 ctgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttag-tttgtt 34650  T
Q  124 tgcagagtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggac 223  Q
    ||||    || ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||  ||||||||||| ||| | ||||||| |    
T  34651 tgcatgacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtc 34749  T
Q  224 ggacgcaaatcgtgacacgat 244  Q
     |  ||| |||||||||||||    
T  34750 cgttgcagatcgtgacacgat 34770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 13806 - 13968
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||| ||||||| | ||||||| || |||||||   ||||||||||||   ||| || |||||||| | |||| |   |||||||||||||||||    
T  13806 gtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaatcgtggcacga 13905  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  13906 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 13968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 244
Target Start/End: Original strand, 18671 - 18880
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtg 132  Q
    |||| |||||||||| ||||||||| ||||||| | ||||||| |  ||||| |  |||||||||||||    || || |||||||| | |||| |   |    
T  18671 attggcttcaaattt-gtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttgctggaag 18769  T
Q  133 caaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 232  Q
    |||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||| ||||||||  |||| ||||| |  |||||    
T  18770 caaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtc-atcctggggaccgttgcaaa 18868  T
Q  233 tcgtgacacgat 244  Q
    ||||||||||||    
T  18869 tcgtgacacgat 18880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 211
Target Start/End: Original strand, 176472 - 176634
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||| ||||||| | ||||||| || |||||||   ||||||||||||   ||| || |||||||| | |||| |   |||||||||||||||||    
T  176472 gtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaatcgtggcacga 176571  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 211  Q
    | | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  176572 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 244
Target Start/End: Original strand, 1761 - 1955
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||||||||||| | ||||||| || ||||| |  |||||||||||||   ||| || |||||| | | |||| |   |||||||||||||||||    
T  1761 gtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaagcaaaatcgtggcacga 1860  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    | | || |||||||||||||||   |||||||||| ||||||| ||  |||||||||||||||   ||||||||| |  ||| |||||||||||||    
T  1861 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcagatcgtgacacgat 1955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 244
Target Start/End: Original strand, 148466 - 148660
Alignment:
Q  49 gtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||||||||||| | ||||||| || ||||| |  |||||||||||||   ||| || |||||| | | |||| |   |||||||||||||||||    
T  148466 gtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaagcaaaatcgtggcacga 148565  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgat 244  Q
    | | || |||||||||||||||   |||||||||| ||||||| ||  |||||||||||||||   ||||||||| |  ||| |||||||||||||    
T  148566 tcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtc-aaccttgggaccgttgcagatcgtgacacgat 148660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 1709 - 1784
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatt 102  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  1709 tgttgaaattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 8184 - 8112
Alignment:
Q  135 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggact 207  Q
    ||||||||||||||| | ||||||||||||||||||   |||||||||||||||||||||  |||||||||||    
T  8184 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 8273 - 8216
Alignment:
Q  26 tgttgagattgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||||| |||| |||||||||| ||||| ||||||||||| |||||||||||| |||||    
T  8273 tgttgatattggcttcaaattt-gtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 7911 - 8036
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggt 123  Q
    |||||||||| | |||||||||| ||||| || |||||||| |||||||||||| || ||||| ||||||||||||||| | ||||||||||| | || |    
T  7911 tgttgagatttggcttcaaattt-gtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ttggtt 8008  T
Q  124 tgcagagtgcaaaatcgtggcacgattt 151  Q
    ||||| |||| |||||||| ||||||||    
T  8009 tgcagggtgccaaatcgtgacacgattt 8036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 1103 - 1248
Alignment:
Q  46 tttgtggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggc 144  Q
    ||||||||||| ||||||||  ||||||||||| |||||||| ||||||||||||||| |  ||  |||||| | || |||||| |||  |||||||||     
T  1103 tttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgag-ttggtttgcagggtgtcaaatcgtggt 1201  T
Q  145 acgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||||||| |  |||||||||||||||  | ||||||||| |||||||    
T  1202 acgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 43458 - 43599
Alignment:
Q  50 tggtttggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcg-gatgccgtgagctagggttgcagagtgcaaaatcgtggcacga 148  Q
    ||||||||||||| || |||||||||||| |||| ||| ||||||||||||||| |  ||| |||||||| || || ||| |||  ||||||||| ||||    
T  43458 tggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagct-ggtttacagggtgtcaaatcgtggtacga 43556  T
Q  149 tttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt 191  Q
    ||| |  ||||||||||| |||  | ||||||||| |||||||    
T  43557 ttttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

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Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 86204 - 86153
Alignment:
Q  33 attgtcttcaaattttgtggtttggaagaacagggaaatcgtgacatgattt 84  Q
    |||| ||||||||||||||||||||||||| || |||||||||||| |||||    
T  86204 attggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 45804 - 45752
Alignment:
Q  26 tgttgagatt-gtcttcaaattttgtggtttggaagaacagggaaatcgtgaca 78  Q
    |||||||||| | |||||||||| ||||||||||||||||| ||||||||||||    
T  45804 tgttgagatttggcttcaaattt-gtggtttggaagaacagagaaatcgtgaca 45752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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