View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2480_low_3 (Length: 595)
Name: NF2480_low_3
Description: NF2480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2480_low_3 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 368; Significance: 0; HSPs: 40)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Complemental strand, 10520710 - 10520163
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
10520710 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgacttggtaatttattgatatgactgggatgtgagcaattttgga |
10520611 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
10520610 |
ccaatgttccttccttttatacctttcttctaacaatggacattcccaaatgagcagtctcttcagagagtcagggaggctgtcttctggtaatgattta |
10520511 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagatttt |
330 |
Q |
| |
|
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| || |
|
|
| T |
10520510 |
agcttttcacatttccacaaatcaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgttcacaatcccaaaaacggagacgtt |
10520411 |
T |
|
| Q |
331 |
ggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactc |
430 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||||| ||||| |
|
|
| T |
10520410 |
ggagagaggagaggtgacgaagcccttttccatcaaaggacttcatttcagagagatccctgatagttagagtcacaagggagatgggtagcaatgactc |
10520311 |
T |
|
| Q |
431 |
cttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10520310 |
cttcatcaaggtgttaaatatatcatcaccctttacaatacccaagtcggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
10520211 |
T |
|
| Q |
531 |
ttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
10520210 |
ttttgggtagaaatcttaattgattgcaatttgggaggtagacaaact |
10520163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Complemental strand, 9980691 - 9980144
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9980691 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttgga |
9980592 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || | | ||| | |||| ||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9980591 |
ccaatgttccttccttttatacctttcttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaatgactct |
9980492 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagatttt |
330 |
Q |
| |
|
||||||| ||| | | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| |
|
|
| T |
9980491 |
agctttttacaatcataaaattcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgttgacaaaacaaaaaacagagacttt |
9980392 |
T |
|
| Q |
331 |
ggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactc |
430 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
9980391 |
ggagagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagatcacagatacgtagatgcacaagggagatgggtagcaatgactc |
9980292 |
T |
|
| Q |
431 |
cttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9980291 |
cttcatcaaggtgttaaatatatcatcaccctttacaattctcaagtcgaaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
9980192 |
T |
|
| Q |
531 |
ttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9980191 |
tttttggtagaaatcacaattgattgtaatttgagaggtagacaaact |
9980144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Complemental strand, 10263926 - 10263379
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
10263926 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgacttcatcatttattcttatgaaagggatgtgagcaattttgga |
10263827 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgact-gatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactc |
229 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||| || ||| ||| | ||| || |||||| ||||||||||||||||||||||||||| |
|
|
| T |
10263826 |
ctaatgttccttccttttatacctttcttctaacaatgggcaaa-actcgatagcgagtagtttaagagaggaagggaggctgtcttctggtaatgactc |
10263728 |
T |
|
| Q |
230 |
aagcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattt |
329 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |
|
|
| T |
10263727 |
tagcttttcacatccaagcaatagaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaaaagaaaaaacagagatat |
10263628 |
T |
|
| Q |
330 |
tggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgact |
429 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || | ||| | || |||||||||||||||||| |||| |
|
|
| T |
10263627 |
tggagagaggagaggtgttgaagcccatttccatcaaaggacttcatttcagagagatcaaagacacgtagatacaaaagggagatgggtagcaatgact |
10263528 |
T |
|
| Q |
430 |
ccttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgt |
529 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10263527 |
ccttcatcaaggtgttaaatatatcatcacccttttgaatagtcaagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgttgt |
10263428 |
T |
|
| Q |
530 |
tttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10263427 |
tttttgggtagaaatctcaattgattgtaatttgggaggtagacaaact |
10263379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Complemental strand, 9842083 - 9841536
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
9842083 |
ggtaggaactgtggaacatacctgaaacgggaacacaacttgtctatcatattctgacttggtggtttatccatatgacagggatgtgagcaattttgga |
9841984 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| | || | ||| | || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
9841983 |
gcaatgttccttccttttatacctttcttctaacaatggacatccccaaatgttcagacgctcaagagagtcagggaggctgtcttctggtaatgactca |
9841884 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagatttt |
330 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||||| || ||||| |||| ||||| || |
|
|
| T |
9841883 |
agcttttcacattgaaacaatataagtgatttcagcgaggaagggaggcagttttctggcaatgactcaagctgtggacaaaacgaaaaatcgagatatt |
9841784 |
T |
|
| Q |
331 |
ggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactc |
430 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
9841783 |
ggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcagagagatccctgatatttagagacacaagggagatgggtagcaacgactc |
9841684 |
T |
|
| Q |
431 |
cttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
530 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| | | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
9841683 |
cttcatcaaggtgttaaatatatcatcacccttatcaattcgcaagtaggaaagtgccgtcaaatattggtgaccccattccgtaaccggcggtgctgtt |
9841584 |
T |
|
| Q |
531 |
ttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9841583 |
ttttgggtagaaatagcaattgattgtaatttgggaggtagacaaact |
9841536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Complemental strand, 10035228 - 10034681
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
10035228 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgacttcatgatttatatctatgaaagggatgtgagcaattttgga |
10035129 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || | || ||| | | |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10035128 |
ccaatgttccttccttttatacctttcttctaacaatgggcaattccaaatgcagagttccctaagagagtcagtgaggctgtcttctggtaatgactca |
10035029 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagatttt |
330 |
Q |
| |
|
||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||| |
|
|
| T |
10035028 |
agctttttacaatcccacaatctaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattccaaaaacagagagttt |
10034929 |
T |
|
| Q |
331 |
ggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactc |
430 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| |||||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
10034928 |
ggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcatcgaaatccctgatatatagatacacaagggagatgggtagcaatgactc |
10034829 |
T |
|
| Q |
431 |
cttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
530 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||| || | || |||| |
|
|
| T |
10034828 |
cttcatcaaggtgttaactatatcatcacccttttcaatactcaagttggaaagtgctgtcaaatattggagaccccattccgttacagatggctttgtt |
10034729 |
T |
|
| Q |
531 |
ttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10034728 |
ctttgggatgaaatcgtaattgattgtaatttgggaggtagacaaact |
10034681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 60 - 578
Target Start/End: Original strand, 10430914 - 10431432
Alignment:
| Q |
60 |
ggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttctt |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10430914 |
ggaacacaacttgtctatcatattgtgacttcatcatttatatctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttctt |
10431013 |
T |
|
| Q |
160 |
ctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaa |
259 |
Q |
| |
|
|||||||||||||| || || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| | |
|
|
| T |
10431014 |
ctaacaatggacattccctaattctcagttgcttaagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaaatcaagtga |
10431113 |
T |
|
| Q |
260 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccattt |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
10431114 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatcacaaaaccaaaaacagagagtttggagagaggagaggtgtcgcagcccattt |
10431213 |
T |
|
| Q |
360 |
ccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcac |
459 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10431214 |
ccatcaaaggacttcatttcagagagatcagtgatatatagatacacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcac |
10431313 |
T |
|
| Q |
460 |
ccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaa |
559 |
Q |
| |
|
|||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||| | | || || | | |||| | |||||||||||| |
|
|
| T |
10431314 |
ccttttgaattgtcaataaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggagttattcttcgagatgaaaaccaaattgattgtaa |
10431413 |
T |
|
| Q |
560 |
tttgggaggtagacaaact |
578 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
10431414 |
tttgggaggtagacaaact |
10431432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 47 - 578
Target Start/End: Complemental strand, 10130125 - 10129600
Alignment:
| Q |
47 |
catacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctt |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| |||| | || ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10130125 |
catacctgaaatgggaacacaacttgtctatcatattgtgcctttgatattttt------gaaagggatgtgagcaattttggagcaatgttccttcctt |
10130032 |
T |
|
| Q |
147 |
ttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttcc |
246 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||| | | ||||| ||||||||||||||||||||||||||||| ||||||||||| | || |
|
|
| T |
10130031 |
ttatacctttcttctaacaatggacatccttgaatgcacagttgcataagagaatcagggaggctgtcttctggtaatgactctagcttttcacaatccc |
10129932 |
T |
|
| Q |
247 |
acaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtg |
346 |
Q |
| |
|
| || | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||| |
|
|
| T |
10129931 |
aaaagtcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattccaaaagaagagatgttggagagagaagaggtg |
10129832 |
T |
|
| Q |
347 |
tcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgtta |
446 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| || |||| |||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10129831 |
tcgaagcccatttccatcaaaggacttcatttcatcgaaatccctgatatatagatacacaagggagatgggtagcaatgactccttcatcaaggtgtta |
10129732 |
T |
|
| Q |
447 |
aatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatca |
546 |
Q |
| |
|
| |||||||||||||||| ||||||| | ||||| || ||||||| ||| ||||||||||| || || |||||||||||| ||| || ||| |
|
|
| T |
10129731 |
actatatcatcaccctttccaatactcaatcttgaaagagcggtcaaatcttgaagaccccattctgtcacaggcggtgctgttcttttggactgtatct |
10129632 |
T |
|
| Q |
547 |
caattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
10129631 |
caattgattgtaatttgggaggtagacaaact |
10129600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 45 - 578
Target Start/End: Original strand, 10360658 - 10361192
Alignment:
| Q |
45 |
aacatacctgaaat-gggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttc |
143 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
10360658 |
aacatacctgaaaacgggaacacaacttgtctatcatattgtgacttggtcgtttatttttatgacggggatgtgagcaattttggagcaatgttccttc |
10360757 |
T |
|
| Q |
144 |
cttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatt |
243 |
Q |
| |
|
|||||||||||||||||||||||||| || | ||| |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
10360758 |
cttttatacctttcttctaacaatgggcaatcatagatgtccagttccttaagagagtcagggaggctgtcttctggtaatgatttaagcttttcacaac |
10360857 |
T |
|
| Q |
244 |
tccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagag |
343 |
Q |
| |
|
| ||| |||| ||||||||||||||||||||||||||||||| |||| |||||| || |||| | |||||| ||||| ||||||||||||||| |
|
|
| T |
10360858 |
cataaaatgtaagtgatttcagcgaggaagggaggcagttttctggtaatgactcaagctgtcgacattcaaaaaatacgagatgttggagagaggagag |
10360957 |
T |
|
| Q |
344 |
gtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtg |
443 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||| ||||| | ||| || || ||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
10360958 |
gtgtcgaagcccatttccatcaaaggacttcatttcagagagatgatggatttccagagacacaagggagacgggtagcaatgactccttcatcaaggtg |
10361057 |
T |
|
| Q |
444 |
ttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaa |
543 |
Q |
| |
|
|||| |||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||||||| || || ||| |||||||| ||| || | |
|
|
| T |
10361058 |
ttaactatatcatcaccctttccaatacccaagttggaaagtgctgtcaaatattggagaccccattctgtcacaggcagtgctgttcttttggactgta |
10361157 |
T |
|
| Q |
544 |
tcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10361158 |
tcataattgattgtaatttgggaggtagacaaact |
10361192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 203 - 578
Target Start/End: Complemental strand, 10583566 - 10583191
Alignment:
| Q |
203 |
agggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaa-gtaatttcagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| | ||| || |||| || ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583566 |
agggaggctgtcttctggtaatgacccaagcttttcacaat-ccataaatgaaagtgatttcagtgaggaagggaggcagttttctggcaatgtctcaag |
10583468 |
T |
|
| Q |
302 |
ttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagt |
401 |
Q |
| |
|
|||||||||| | ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| | ||||| ||| |
|
|
| T |
10583467 |
ttgatgacaaatgaaaaaacagagatattggagagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagattccagatatataga |
10583368 |
T |
|
| Q |
402 |
tccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattgga |
501 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||| | || || || |
|
|
| T |
10583367 |
tacacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcatcctttccaatactccagcttgaaagagctgttagatctttga |
10583268 |
T |
|
| Q |
502 |
gaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10583267 |
gaccccattccgtaaccggcggtgctgttttttgggtaaaaatcacaattgatcgtaatttgagaggtagacaaact |
10583191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 31 - 301
Target Start/End: Complemental strand, 9853102 - 9852832
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
9853102 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtaacctggtcatttatttctatgacagggatgtgagcaattttgga |
9853003 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
9853002 |
ccaatgttccttccttttatacctttcttctaacaatggacatccataaatgtccagtctcttcagtgagtcagggaggctgtcttctggtaatgactct |
9852903 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||| |||| |||||| |
|
|
| T |
9852902 |
agcttttcacatttccacaattcaagtgatttcagcgatgatgggaggcagttttctggtaatgactcaag |
9852832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 59 - 578
Target Start/End: Original strand, 11778855 - 11779373
Alignment:
| Q |
59 |
gggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttct |
158 |
Q |
| |
|
||||||||| ||||| | ||||||||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11778855 |
gggaacacagcttgt-tctcatattgtgactttttcatttatttctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttct |
11778953 |
T |
|
| Q |
159 |
tctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagta |
258 |
Q |
| |
|
||||||||||| |||| | || |||| ||| |||||||| |||||||||||||| |||||||||||||||| ||||| | ||| |||| |
|
|
| T |
11778954 |
tctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaatgactcaagctcctcacacatttgaaatgaaagtg |
11779053 |
T |
|
| Q |
259 |
atttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatt |
358 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| || || |||||||| |||| |||||| || |||||||||||||||||| |||||||| |
|
|
| T |
11779054 |
atttcaacgaggaagggaggcagttttctggcaatgactcgagctgttgacaattccaaaaatagagatattcgagagaggagaggtgtcgaagcccatt |
11779153 |
T |
|
| Q |
359 |
tccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatca |
458 |
Q |
| |
|
|||||| |||||||||||||||| |||||| ||||| || |||||||||||||| ||||||||| | ||||||||||||||| | | ||||| |||| |
|
|
| T |
11779154 |
tccatcgaaggacttcatttcatagagatcaatgatagacaggtccacaagggagataggtagcaacaaatccttcatcaaggtggtgactatattatca |
11779253 |
T |
|
| Q |
459 |
cccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgta |
558 |
Q |
| |
|
| ||| |||| | | ||||| | || | ||||||||||||||| ||||| || |||| |||| |||||| | || ||||||||||||||| |
|
|
| T |
11779254 |
tcatttccaataaccagttctgaaagagtggtttggttttggagaccccattctgtaactggtggtgttgttatttgggaaaaactcacaattgattgta |
11779353 |
T |
|
| Q |
559 |
atttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
11779354 |
atttgggaggtagacaaact |
11779373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 249 - 578
Target Start/End: Complemental strand, 9852746 - 9852417
Alignment:
| Q |
249 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtc |
348 |
Q |
| |
|
|||| |||| ||||||| |||||||||| ||||||||||||||||| | |||| || |||||| ||| |||||| |||||||||| ||||||||| |
|
|
| T |
9852746 |
aatttaagtgatttcagtgaggaagggaagcagttttctggcaatgacccaagctgttgacaacccgcaaaatagagatattggagagagaagaggtgtc |
9852647 |
T |
|
| Q |
349 |
ggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaa |
448 |
Q |
| |
|
| |||||||||||||||||||||||||||||| |||| || |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9852646 |
gaagcccatttccatcaaaggacttcatttcagagagaaccatgatatttagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaaa |
9852547 |
T |
|
| Q |
449 |
tatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcaca |
548 |
Q |
| |
|
|||||||||||||||| ||| | | | | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9852546 |
tatatcatcaccctttacaatccacaatgatgaaagagctgtcaaatattggagaccccattccgtaaccggcggtgctgtttttttggtagaaatcaca |
9852447 |
T |
|
| Q |
549 |
attgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||| | |||||||||||||||||||||| |
|
|
| T |
9852446 |
attgttcttaatttgggaggtagacaaact |
9852417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 59 - 578
Target Start/End: Complemental strand, 11772430 - 11771912
Alignment:
| Q |
59 |
gggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttct |
158 |
Q |
| |
|
||||||||| ||||| | ||||||||||||||| | |||||| | |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
11772430 |
gggaacacagcttgt-tctcatattgtgactttttcatttatatctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttct |
11772332 |
T |
|
| Q |
159 |
tctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagta |
258 |
Q |
| |
|
||||||||||| |||| | || |||| ||| |||||||| |||||||||||||| |||||||||||||||| ||||| | ||| |||| |
|
|
| T |
11772331 |
tctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaatgactcaagctcctcacacatttgaaatgaaagtg |
11772232 |
T |
|
| Q |
259 |
atttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatt |
358 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| || || |||||||| |||| |||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
11772231 |
atttcaacgaggaagggaggcagttttctggcaatgactcgagctgttgacaattccaaaaatagagatattggagagaggagaggtgtcgaagcccatt |
11772132 |
T |
|
| Q |
359 |
tccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatca |
458 |
Q |
| |
|
||||||||| ||||||||||||| |||||| ||||| || |||||||||||||| || |||||| |||| |||||||||||| | | ||||| |||| |
|
|
| T |
11772131 |
tccatcaaaagacttcatttcatagagatcaatgatagacaggtccacaagggagataggcagcaacaactctttcatcaaggtggtgactatattatca |
11772032 |
T |
|
| Q |
459 |
cccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgta |
558 |
Q |
| |
|
| ||| |||| | | | ||||| | || | ||||||||||||||| ||||| || |||| |||| |||||| | || ||||||||||||||| |
|
|
| T |
11772031 |
tcatttccaataaccaatttcgaaagagtggtttggttttggagaccccattctgtaactggtggtgttgttatttgggaaaaactcacaattgattgta |
11771932 |
T |
|
| Q |
559 |
atttgggaggtagacaaact |
578 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
11771931 |
agttgggaggtagacaaact |
11771912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 49 - 294
Target Start/End: Complemental strand, 10666742 - 10666497
Alignment:
| Q |
49 |
tacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctttt |
148 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10666742 |
tacctgaaacaggaacacaactcgtctatcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttcctttt |
10666643 |
T |
|
| Q |
149 |
atacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccac |
248 |
Q |
| |
|
||||||||||||||||||||||||| || | |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
10666642 |
atacctttcttctaacaatggacattcctcaatgtgcagttccttaagagagtcagggaggctgtcttctggtaatgactcaagcttttcacattcaaac |
10666543 |
T |
|
| Q |
249 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
294 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| || |||||| |||| |
|
|
| T |
10666542 |
aattcaagtgatttcagcgaggaagggaggctgtcttctggtaatg |
10666497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 261 - 578
Target Start/End: Original strand, 10372916 - 10373233
Alignment:
| Q |
261 |
ttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttc |
360 |
Q |
| |
|
||||| ||||||||||||| || |||||| |||| |||||| | | |||||||||||| ||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
10372916 |
ttcagagaggaagggaggctgtcttctggtaatgactcaagcttttcacaattaaaaaaatagagatttttgagagaggagaggtgtcgaagcccatttc |
10373015 |
T |
|
| Q |
361 |
catcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacc |
460 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |
|
|
| T |
10373016 |
catcaaaggacttcatttcagagagataattgatacgtagatgcacaagggagatgggtagcaacgactccttcatcaaggtgttaactatatcatcatc |
10373115 |
T |
|
| Q |
461 |
cttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaat |
560 |
Q |
| |
|
|||| ||||||| || || || ||||| | || ||||||||||||||||||||||||||||| | || || | | |||||| ||||||||||||| |
|
|
| T |
10373116 |
ctttctaatactcaagcttgacagagctgttagatcttggagaccccattccgtaaccggcggtgttattcttcgagatgaaatccaaattgattgtaat |
10373215 |
T |
|
| Q |
561 |
ttgggaggtagacaaact |
578 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
10373216 |
ttgagaggtagacaaact |
10373233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 404 - 578
Target Start/End: Complemental strand, 10666318 - 10666144
Alignment:
| Q |
404 |
cacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggaga |
503 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10666318 |
cacaagggatatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttttcaatactcaagtaggaaagtgctgtcaaatattggaga |
10666219 |
T |
|
| Q |
504 |
ccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||| | | || |||| | ||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10666218 |
ccccattccgtaaccggcggagttattctttgagatgaaatcacaattgtttgtaatttgggaggtagacaaact |
10666144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 31 - 294
Target Start/End: Complemental strand, 10583808 - 10583544
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaat-gggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgg |
129 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583808 |
ggtaggaaatgtggaacatacctgaaaacgggaacacaacttgtctatcatattgtgactttgtgatttatttgtatgacagggatgtgagcaattttgg |
10583709 |
T |
|
| Q |
130 |
accaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactc |
229 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||| || ||| ||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583708 |
accaatattcattccttttatacctttcttctaacaatgggcaaaattggatggtcagtcgctcaagagagtcagggaggctgtcttctggtaatgactc |
10583609 |
T |
|
| Q |
230 |
aagcttttcacatttccac-aattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
294 |
Q |
| |
|
|| || |||| |||| ||||||||| ||||||||||||||||||||| || |||||| |||| |
|
|
| T |
10583608 |
gagtcttacaca-acccacaaattgaagtgatttcagcgaggaagggaggctgtcttctggtaatg |
10583544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 45 - 241
Target Start/End: Original strand, 10372768 - 10372965
Alignment:
| Q |
45 |
aacatacctgaaat-gggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttc |
143 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||| || || ||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10372768 |
aacatacctgaaaacgggaacacaacttgtctatcatattgtgatttggtcgtttatttttatgacggggatgtgagcaattttggaccaatgttccttc |
10372867 |
T |
|
| Q |
144 |
cttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcaca |
241 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10372868 |
cttttatacctttcttctaacaatgggcatcccataatgaccagtctcttcagagaggaagggaggctgtcttctggtaatgactcaagcttttcaca |
10372965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 254 - 460
Target Start/End: Complemental strand, 10503584 - 10503378
Alignment:
| Q |
254 |
aagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagc |
353 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| ||| ||||||| ||||||||||| ||||| ||| |
|
|
| T |
10503584 |
aagtaatttcagcgaggaagggaggcagttttctggcaatgactcaagctgtagacaattaagaaattcaagattttcgagagaggagatttgtcgaagc |
10503485 |
T |
|
| Q |
354 |
ccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatat |
453 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10503484 |
ccatttccatcaaaggacttcatttcatagagatcactgatatatagagatgcaagggagatgggaagcaacgactccttcatcaaggtgttaaatatat |
10503385 |
T |
|
| Q |
454 |
catcacc |
460 |
Q |
| |
|
||||||| |
|
|
| T |
10503384 |
catcacc |
10503378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 47 - 458
Target Start/End: Complemental strand, 10531989 - 10531579
Alignment:
| Q |
47 |
catacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctt |
146 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||| |||| | |||||| ||||||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
10531989 |
catacctgaaacgggaacacaacttgtct-tcatattgtaacttgcttgtttattattatgacagggatgtgagaaattttggaccaattttccttcctt |
10531891 |
T |
|
| Q |
147 |
ttatacctttcttctaacaatggacatcgact-gatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttc |
245 |
Q |
| |
|
||||||||||||||||||||||| || ||| ||| ||| || |||||| |||||||||||||||||||||||||||||| || |||| || |
|
|
| T |
10531890 |
ttatacctttcttctaacaatgggca-aaactcgatagtgagtagtttaagagaggaagggaggctgtcttctggtaatgactcaagtcttacacaactc |
10531792 |
T |
|
| Q |
246 |
cacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggt |
345 |
Q |
| |
|
| ||||||||| | |||||||||||||||||||| ||||||||||||| |||||| | ||||||| ||| ||||||| |||||||||||||| |
|
|
| T |
10531791 |
gaaaattgaagtgacttcagcgaggaagggaggcaattttctggcaatgactcaagctccaagcaattaagaaagtgaagatttttgagagaggagaggt |
10531692 |
T |
|
| Q |
346 |
gtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgtt |
445 |
Q |
| |
|
|||| || |||||||| ||||| ||||| |||||| ||||| ||| ||| ||||||||||||||| ||||| ||||| |||| || |||||| |
|
|
| T |
10531691 |
gtcgaagtccatttccttcaaatgactttatttcagagagatgaccaatagatagagacacaagggagatgggaagcaatgactcgttcagcacggtgtt |
10531592 |
T |
|
| Q |
446 |
aaatatatcatca |
458 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
10531591 |
aactatatcatca |
10531579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 77 - 465
Target Start/End: Complemental strand, 10086354 - 10085967
Alignment:
| Q |
77 |
tcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaac-aatggacatcg |
175 |
Q |
| |
|
||||||||||| || | |||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10086354 |
tcatattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaaagggaaaaat |
10086255 |
T |
|
| Q |
176 |
actgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaaggg |
275 |
Q |
| |
|
|| ||| ||| | ||||||||| |||||||||| |||||| |||||||| ||||| ||||||| |||| | || |||| |||||||||||||||| |
|
|
| T |
10086254 |
ac-gatgctcagacgcttcagagaatcagggaggcagtcttccggtaatgattcaagtctttcacaactccaaatttcaagtgatttcagcgaggaagga |
10086156 |
T |
|
| Q |
276 |
aggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttca |
375 |
Q |
| |
|
| ||| ||||| || |||| ||||||||| ||||||||| ||| ||| ||| |||| ||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10086155 |
acgcaattttcaggaaatggctcaagttgttgacaattacgaaagtgaaga-tttcgagaaaggagaggtgttgaagcccatttccatcaaaggacttca |
10086057 |
T |
|
| Q |
376 |
tttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcaccctttt |
465 |
Q |
| |
|
| | || |||||| |||| || |||||||||||||| |||||||| ||| || | ||||||||||| ||||||| || |||||| |
|
|
| T |
10086056 |
tgttatagagatcaccaatattcagagacacaagggagatggttagcaacggctcttttaccaaggtgttaactatatcaccatcctttt |
10085967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 77 - 465
Target Start/End: Complemental strand, 10193274 - 10192887
Alignment:
| Q |
77 |
tcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaac-aatggacatcg |
175 |
Q |
| |
|
||||||||||| || | |||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||| || ||| | |
|
|
| T |
10193274 |
tcatattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaaagggaaaaat |
10193175 |
T |
|
| Q |
176 |
actgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaaggg |
275 |
Q |
| |
|
|| ||| || | ||||||||| |||||||||| |||||| |||||||| ||||| ||||||| |||| | || |||| |||||||||||||||| |
|
|
| T |
10193174 |
ac-gatgcttagacgcttcagagaatcagggaggcagtcttccggtaatgattcaagtctttcacaactccaaatttcaagtgatttcagcgaggaagga |
10193076 |
T |
|
| Q |
276 |
aggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttca |
375 |
Q |
| |
|
| ||| ||||| || |||| ||||||||| ||||||||| ||| ||| ||| |||| ||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
10193075 |
acgcaattttcaggaaatggctcaagttgttgacaattacgaaagtgaaga-tttcgagaaaggagaggtgttgaagcccatttccatcaaaggacttca |
10192977 |
T |
|
| Q |
376 |
tttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcaccctttt |
465 |
Q |
| |
|
| | || |||||| |||| || ||||||||||||||||||||||| ||| || | ||||||||||| ||||||| || |||||| |
|
|
| T |
10192976 |
tgttatagagatcaccaatattcagagacacaagggagatgggtagcaacggctcttttaccaaggtgttaactatatcaccatcctttt |
10192887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 49 - 458
Target Start/End: Complemental strand, 10680785 - 10680377
Alignment:
| Q |
49 |
tacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctttt |
148 |
Q |
| |
|
||||||||| || ||||||||||| | |||||||||||||| | |||||| ||||||||||||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
10680785 |
tacctgaaacggaaacacaacttgacc-tcatattgtgacttgcttgtttattattatgacagggatgtgagaaattttggaccgatgttcattcctttt |
10680687 |
T |
|
| Q |
149 |
atacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccac |
248 |
Q |
| |
|
||||||||||||||||||||| || |||| ||| || |||||| ||||||||||||||||||||| ||||||| || |||| || | |
|
|
| T |
10680686 |
atacctttcttctaacaatgggcaaaacttgatagtgagtagtttaagagaggaagggaggctgtcttctggtaacaactcaagtcttacacaactcaaa |
10680587 |
T |
|
| Q |
249 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtc |
348 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||||||| |||| |||||| | ||||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
10680586 |
aattgaagtgatttcagcgaggaagggaggcaattttctggaaatgactcaagctccgagcaattaagaaagttaagatttttgagagaggagaggtgtc |
10680487 |
T |
|
| Q |
349 |
ggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaa |
448 |
Q |
| |
|
| || |||||||| |||| ||||| |||||| ||||| ||| ||| ||||||||||||||| ||||| ||||| |||| || |||||||| |
|
|
| T |
10680486 |
gaagtccatttccttcaagtgactttatttcagagagatgaccaatagatagagacacaagggagatgggaagcaatgactcgttcagcacggtgttaac |
10680387 |
T |
|
| Q |
449 |
tatatcatca |
458 |
Q |
| |
|
|||||||||| |
|
|
| T |
10680386 |
tatatcatca |
10680377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 578
Target Start/End: Complemental strand, 10091784 - 10091475
Alignment:
| Q |
260 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccattt |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| || |||| | | | || |||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
10091784 |
tttcagcgaggaagggaggcagttttctggcaatgactgaagctgtcgacattgacagaaatcgagacgttggagagaggagaggtgtcgaagcccattt |
10091685 |
T |
|
| Q |
360 |
ccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcac |
459 |
Q |
| |
|
||||||||||||||||| | || ||||||| || |||||||||||||||||||||||||||| ||| |||| |||||| ||||||| | |
|
|
| T |
10091684 |
ccatcaaaggacttcatcttatagagatcc---------agagacacaagggagatgggtagcaacgactccgtcaccaagttgttaactatatcacctg |
10091594 |
T |
|
| Q |
460 |
ccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaa |
559 |
Q |
| |
|
||| || ||| || | | |||||| | || | || ||||||||||||||||||||||||||||| | |||||| || | |||| ||||| |||||| |
|
|
| T |
10091593 |
cctctttaatcatcaattcggaaagagtggttagatcttggagaccccattccgtaaccggcggtgttatttttttggaaaaaataacaatcttttgtaa |
10091494 |
T |
|
| Q |
560 |
tttgggaggtagacaaact |
578 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
10091493 |
tttgggaggtagacaaact |
10091475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 260 - 578
Target Start/End: Complemental strand, 10198666 - 10198357
Alignment:
| Q |
260 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccattt |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| || |||| | | | || |||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
10198666 |
tttcagcgaggaagggaggcagttttctggcaatgactgaagctgtcgacattgacagaaatcgagacgttggagagaggagaggtgtcgaagcccattt |
10198567 |
T |
|
| Q |
360 |
ccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcac |
459 |
Q |
| |
|
||||||||||||||||| | || ||||||| || |||||||||||||||||||||||||||| ||| |||| |||||| ||||||| | |
|
|
| T |
10198566 |
ccatcaaaggacttcatcttatagagatcc---------agagacacaagggagatgggtagcaacgactccgtcaccaagttgttaactatatcacctg |
10198476 |
T |
|
| Q |
460 |
ccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaa |
559 |
Q |
| |
|
||| || ||| || | | |||||| | || | || ||||||||||||||||||||||||||||| | |||||| || | |||| ||||| |||||| |
|
|
| T |
10198475 |
cctctttaatcatcaattcggaaagagtggttagatcttggagaccccattccgtaaccggcggtgttatttttttggaaaaaataacaatcttttgtaa |
10198376 |
T |
|
| Q |
560 |
tttgggaggtagacaaact |
578 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
10198375 |
tttgggaggtagacaaact |
10198357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 301
Target Start/End: Complemental strand, 10092202 - 10091950
Alignment:
| Q |
49 |
tacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctttt |
148 |
Q |
| |
|
||||||||| ||| |||| |||||||||||||||||| || || |||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10092202 |
tacctgaaacaggagcacagcttgtctatcatattgtgcgttggttgtttattgtgatgacagggatgtgagaaattttggaccaatgttccttcctttt |
10092103 |
T |
|
| Q |
149 |
atacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccac |
248 |
Q |
| |
|
||||||||||||||||||||| |||| | || | ||| | | ||||| |||||||||||||||||||||||| |||||| ||| ||| | | | |
|
|
| T |
10092102 |
atacctttcttctaacaatgggcatcccataatgtacagagtgataagagatgaagggaggctgtcttctggtaatgaatcaagcattttacaatcactc |
10092003 |
T |
|
| Q |
249 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
||| |||| ||||||||||||| ||||||||||| ||||| |||| |||||| |
|
|
| T |
10092002 |
aatctaagtgatttcagcgaggacgggaggcagttgtctggaaatgactcaag |
10091950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 49 - 301
Target Start/End: Complemental strand, 10199084 - 10198832
Alignment:
| Q |
49 |
tacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctttt |
148 |
Q |
| |
|
||||||||| ||| |||| |||||||||||||||||| || || |||||| |||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10199084 |
tacctgaaacaggagcacagcttgtctatcatattgtgcgttggttgtttattgtgatgacagggatgtgagaaattttggaccaatgttccttcctttt |
10198985 |
T |
|
| Q |
149 |
atacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccac |
248 |
Q |
| |
|
||||||||||||||||||||| |||| | || | ||| | | ||||| |||||||||||||||||||||||| |||||| ||| ||| | | | |
|
|
| T |
10198984 |
atacctttcttctaacaatgggcatcccataatgtacagagtgataagagatgaagggaggctgtcttctggtaatgaatcaagcattttacaatcactc |
10198885 |
T |
|
| Q |
249 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
||| |||| ||||||||||||| ||||||||||| ||||| |||| |||||| |
|
|
| T |
10198884 |
aatctaagtgatttcagcgaggacgggaggcagttgtctggaaatgactcaag |
10198832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 49 - 241
Target Start/End: Complemental strand, 10503857 - 10503666
Alignment:
| Q |
49 |
tacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttcctttt |
148 |
Q |
| |
|
||||||||| ||||||||| | |||| |||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10503857 |
tacctgaaacgggaacacagcctgtcc-tcatattgtgacttgtccatctatttctatgacagggatgtgagaaattttggaccaatgttccttcctttt |
10503759 |
T |
|
| Q |
149 |
atacctttcttctaacaatggacatc---gactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcaca |
241 |
Q |
| |
|
||||||||||||||| ||| |||| || |||| |||| ||| ||||| ||||| |||||||||||||||||||| | |||||||||||| |
|
|
| T |
10503758 |
atacctttcttctaatgttgggcatctttgaatgat---cagtagcttaagagaatcaggaaggctgtcttctggtaatgagtaaagcttttcaca |
10503666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 10091966 - 10091871
Alignment:
| Q |
216 |
tctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaa |
311 |
Q |
| |
|
||||| |||||||||||||||||||| ||| ||| ||||| |||||||||| ||||||||||||||||||| |||| ||| || |||| |||| |
|
|
| T |
10091966 |
tctggaaatgactcaagcttttcacaattcgcaaatcgaagtgatttcagcgacaaagggaggcagttttctggtaatgactccagatgattacaa |
10091871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 311
Target Start/End: Complemental strand, 10198848 - 10198753
Alignment:
| Q |
216 |
tctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaa |
311 |
Q |
| |
|
||||| |||||||||||||||||||| ||| ||| ||||| |||||||||| ||||||||||||||||||| |||| ||| || |||| |||| |
|
|
| T |
10198848 |
tctggaaatgactcaagcttttcacaattcgcaaatcgaagtgatttcagcgacaaagggaggcagttttctggtaatgactccagatgattacaa |
10198753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 576
Target Start/End: Complemental strand, 10531420 - 10531341
Alignment:
| Q |
497 |
ttggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaatttgggaggtagacaaa |
576 |
Q |
| |
|
||||||||||||||| || || ||||| | || | ||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10531420 |
ttggagaccccattctgttacaggcggcgttgctctttggaaagatatcacaattgattgtaatttgggaggtagacaaa |
10531341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 11242462 - 11242551
Alignment:
| Q |
77 |
tcatattgtgactttg-taatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaaca |
165 |
Q |
| |
|
|||||||||||||| | | ||||||| | |||||| |||||||| ||||||||||||||||||| | ||| ||||||||||||||||| |
|
|
| T |
11242462 |
tcatattgtgacttgggtcatttattattttgacagtaatgtgagctattttggaccaatgttcctgcttttgatacctttcttctaaca |
11242551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 578
Target Start/End: Complemental strand, 10680172 - 10680137
Alignment:
| Q |
543 |
atcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
10680172 |
atcacaattgattgtaatttgggaggtagacaaact |
10680137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 323 - 380
Target Start/End: Original strand, 13852579 - 13852636
Alignment:
| Q |
323 |
gagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttca |
380 |
Q |
| |
|
|||||| | |||||||||||| ||||| |||||||||||||| || |||||||||||| |
|
|
| T |
13852579 |
gagattgttgagagaggagagatgtcgaagcccatttccatcgaaagacttcatttca |
13852636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 541 - 578
Target Start/End: Original strand, 13852815 - 13852852
Alignment:
| Q |
541 |
aaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13852815 |
aaatcacaattgattgtaatttaggaggtagacaaact |
13852852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 10666390 - 10666347
Alignment:
| Q |
332 |
gagagaggagaggtgtcggagcccatttccatcaaaggacttca |
375 |
Q |
| |
|
|||||||||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
10666390 |
gagagaggagaggtgtagaagcccatttccattaaaggacttca |
10666347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 13163906 - 13163859
Alignment:
| Q |
333 |
agagaggagaggtgtcggagcccatttccatcaaaggacttcatttca |
380 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
13163906 |
agagaggataggtgtcggagtccatttccatcaaaggattttatttca |
13163859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 8585532 - 8585578
Alignment:
| Q |
95 |
atttatttgtatgacagggatgtgagcaattttggaccaatgttcct |
141 |
Q |
| |
|
|||||| | ||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
8585532 |
atttatatttatgacaggtatgtgagcaatgttggaccaatgttcct |
8585578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 10091850 - 10091812
Alignment:
| Q |
263 |
cagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
10091850 |
cagcgaggaagggagacagttttctggcaatgactcaag |
10091812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 10198732 - 10198694
Alignment:
| Q |
263 |
cagcgaggaagggaggcagttttctggcaatgtctcaag |
301 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
10198732 |
cagcgaggaagggagacagttttctggcaatgactcaag |
10198694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 31 - 578
Target Start/End: Original strand, 54446 - 54993
Alignment:
| Q |
31 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttgga |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
54446 |
ggtaggaactgtggaacatacctgaaatgggaacacaacttgtctatcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttgga |
54545 |
T |
|
| Q |
131 |
ccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactca |
230 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || | | ||| | |||| ||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
54546 |
ccaatgttccttccttttatacctttcttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaatgactct |
54645 |
T |
|
| Q |
231 |
agcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagatttt |
330 |
Q |
| |
|
||||||| ||| | | |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| ||| |
|
|
| T |
54646 |
agctttttacaatcataaaattcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgttgacaaaacaaaaaacagagacttt |
54745 |
T |
|
| Q |
331 |
ggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactc |
430 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||| | ||||||||||||||||||||| ||||| |
|
|
| T |
54746 |
ggagagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagatcacagatacgtagatgcacaagggagatgggtagcaatgactc |
54845 |
T |
|
| Q |
431 |
cttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| | | | |||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54846 |
cttcatcaaggtgttaaatatatcatcaccctttacaatacacaaaaaaaaaagagctgtcaaatattggagaccccattccgtaaccggcggtgctgtt |
54945 |
T |
|
| Q |
531 |
ttttgggtagaaatcacaattgattgtaatttgggaggtagacaaact |
578 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
54946 |
tttttggtagaaatcacaattgattgtaatttgagaggtagacaaact |
54993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 179; Significance: 3e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 95 - 577
Target Start/End: Complemental strand, 26910049 - 26909567
Alignment:
| Q |
95 |
atttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacatcgactgatctccagtctcttc |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || ||||| ||| |
|
|
| T |
26910049 |
atttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttgtacctttcttctaacaatgggcaagatgacatttccagcatctca |
26909950 |
T |
|
| Q |
195 |
agagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
294 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || ||||| | |||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26909949 |
agagagtcggggaggctgtcttctggtaatgactcaagtttctcacagccataaaattgaagatatttcagcgaggaagggaggcagttttctggaaatg |
26909850 |
T |
|
| Q |
295 |
tctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttcatttcattgagatccttgat |
394 |
Q |
| |
|
|| ||||| | |||||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26909849 |
acttgagttgttcacaattaataaagtgaagattttggagagaggagaggcgtcgaagcccatttccatcaaaggacttcatttcatagagatccatgat |
26909750 |
T |
|
| Q |
395 |
atctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaa |
494 |
Q |
| |
|
| ||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| || ||| || | | ||||| | || | | |
|
|
| T |
26909749 |
ttgtagagaaacaagggagatgggtagcaacaactccttcatcaaggtgttaaatgtatcatgaccctctttgatagtcaattctgaaagagtggttaga |
26909650 |
T |
|
| Q |
495 |
tattggagaccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaatttgggaggtagacaaac |
577 |
Q |
| |
|
| |||||||| |||||||||||| | ||||| |||| |||| | ||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
26909649 |
tcttggagacaccattccgtaacagacggtgttgttatttgagaccaaaggtcaattgattgtaagttgggaggtagacaaac |
26909567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 77 - 464
Target Start/End: Original strand, 17849813 - 17850200
Alignment:
| Q |
77 |
tcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacatcga |
176 |
Q |
| |
|
|||||||||||||| || | |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | || ||||| |
|
|
| T |
17849813 |
tcatattgtgacttggtcctcaatttctatgacagggatgtgagcaattttggaccaatgttcctgccttttatacctttcttctaatatagggcatcgc |
17849912 |
T |
|
| Q |
177 |
ctgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaaggga |
276 |
Q |
| |
|
| || |||||| ||| |||||| ||||||||||||||||||||| |||||||| ||| ||| | || |||| ||| ||||||| |||||||||| |
|
|
| T |
17849913 |
caaatgaccagtcgcttaagagaggaagggaggctgtcttctggtaacgactcaagtcttttacaataacaaaattcaagcgatttcagtgaggaaggga |
17850012 |
T |
|
| Q |
277 |
ggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggagaggtgtcggagcccatttccatcaaaggacttcat |
376 |
Q |
| |
|
||||||||| |||||||| ||||||||| ||||| |||| ||| ||| ||| |||||||| || ||||| || ||||||||||||||||| |||| |
|
|
| T |
17850013 |
ggcagttttgtggcaatgactcaagttgttgacagttaagaaagtcaagactttcaagagaggaaagatgtcgaagtccatttccatcaaaggagttcag |
17850112 |
T |
|
| Q |
377 |
ttcattgagatccttgatatctagttccacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttt |
464 |
Q |
| |
|
| || ||||| |||| || ||| ||||| || || |||||||||||||||||||||||||| | |||||||||| ||||| |
|
|
| T |
17850113 |
attatagagatgacagatagtcagagacacgagggatattgggagcaacgactccttcatcaaggtgttcactatatcatcatccttt |
17850200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 8e-41; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 77 - 381
Target Start/End: Original strand, 44954550 - 44954854
Alignment:
| Q |
77 |
tcatattgtgactttgtaatttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacatcga |
176 |
Q |
| |
|
|||||||||||||| | || ||||| ||||||| | || | |||||||||||||||||||||||||||| |||||||||||||| | | || ||||| |
|
|
| T |
44954550 |
tcatattgtgacttggccatctatttctatgacatgaattttagcaattttggaccaatgttccttccttctatacctttcttctgatacagggcatcgc |
44954649 |
T |
|
| Q |
177 |
ctgatctccagtctcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcacatttccacaattgaagtaatttcagcgaggaaggga |
276 |
Q |
| |
|
| || |||||| || ||||||| |||||||| ||||||||||| |||||||| | |||||| | | ||||||||| |||||||||||||||| | |
|
|
| T |
44954650 |
caaatgaccagtcgattaagagagttggggaggctttcttctggtaacgactcaag-tcttcacaaaacaaaaattgaagtgatttcagcgaggaaggaa |
44954748 |
T |
|
| Q |
277 |
ggcagttttctggcaatgtctcaagttgatgacaattaaaaaaccagagattttggagagaggag-aggtgtcggagcccatttccatcaaaggacttca |
375 |
Q |
| |
|
| ||||||||||| |||| |||||| || ||||| ||| ||| |||||||| |||||||||| |||||| | ||||||||||| | ||||||||||| |
|
|
| T |
44954749 |
gacagttttctggaaatgactcaagctgttgacagttacgaaagtggagattttcgagagaggagtaggtgttgaagcccatttccttgaaaggacttca |
44954848 |
T |
|
| Q |
376 |
tttcat |
381 |
Q |
| |
|
|||||| |
|
|
| T |
44954849 |
tttcat |
44954854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 577
Target Start/End: Complemental strand, 11487881 - 11487708
Alignment:
| Q |
404 |
cacaagggagatgggtagcaacgactccttcatcaaggtgttaaatatatcatcacccttttgaatactcgagtaggaaagtgctgtcaaatattggaga |
503 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||| || | ||||| || |||| || || |||| |
|
|
| T |
11487881 |
cacaagggagatgggtagcaacgactgcttcatcaaggtgttaagtatatcatcacccactccaatagtcaaccgtgaaagagcggtcagatctttgaga |
11487782 |
T |
|
| Q |
504 |
ccccattccgtaaccggcggtgctgttttttgggtagaaatcacaattgattgtaatttgggaggtagacaaac |
577 |
Q |
| |
|
|||||||||||||| ||||| | || | ||| | ||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
11487781 |
ccccattccgtaacaggcggcgttgatctttccgacaaaatctcaattgattctaatttgggaggtagagaaac |
11487708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 11488165 - 11488114
Alignment:
| Q |
190 |
tcttcagagagtcagggaggctgtcttctggtaatgactcaagcttttcaca |
241 |
Q |
| |
|
|||| ||||||||||||||| | ||| ||||||||||| ||||||||||||| |
|
|
| T |
11488165 |
tcttaagagagtcagggaggttttctactggtaatgacccaagcttttcaca |
11488114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 11488254 - 11488217
Alignment:
| Q |
95 |
atttatttgtatgacagggatgtgagcaattttggacc |
132 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||| |
|
|
| T |
11488254 |
atttatttctttgacagggatgtgagcaattttggacc |
11488217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 143082 - 143129
Alignment:
| Q |
333 |
agagaggagaggtgtcggagcccatttccatcaaaggacttcatttca |
380 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
143082 |
agagaggataggtgtcggagtccatttccatcaaaggattttatttca |
143129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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