View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2480_low_5 (Length: 387)

Name: NF2480_low_5
Description: NF2480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2480_low_5
NF2480_low_5
[»] chr5 (59 HSPs)
chr5 (10-301)||(7907873-7908165)
chr5 (188-301)||(2568650-2568762)
chr5 (156-292)||(17258817-17258952)
chr5 (234-301)||(10272442-10272509)
chr5 (158-301)||(34975356-34975498)
chr5 (164-293)||(12459943-12460071)
chr5 (182-287)||(37611175-37611279)
chr5 (182-287)||(37787905-37788009)
chr5 (138-293)||(16937799-16937953)
chr5 (201-293)||(17368676-17368767)
chr5 (236-300)||(18543210-18543273)
chr5 (230-292)||(4014431-4014493)
chr5 (156-218)||(13244485-13244547)
chr5 (227-293)||(33533543-33533609)
chr5 (147-268)||(10125643-10125763)
chr5 (187-300)||(37526164-37526276)
chr5 (187-300)||(37588325-37588437)
chr5 (233-293)||(11707055-11707115)
chr5 (233-301)||(12425563-12425631)
chr5 (187-286)||(7674655-7674753)
chr5 (164-271)||(8089958-8090064)
chr5 (236-287)||(12242723-12242774)
chr5 (234-301)||(36318766-36318833)
chr5 (234-301)||(36326003-36326070)
chr5 (232-286)||(7319017-7319071)
chr5 (182-293)||(18857358-18857470)
chr5 (156-210)||(35095721-35095774)
chr5 (156-266)||(41112832-41112941)
chr5 (232-298)||(41957460-41957526)
chr5 (141-194)||(36542205-36542258)
chr5 (193-301)||(6587078-6587185)
chr5 (241-293)||(6593299-6593351)
chr5 (232-300)||(12975340-12975407)
chr5 (201-293)||(17827524-17827615)
chr5 (241-301)||(25461083-25461143)
chr5 (156-300)||(32172646-32172789)
chr5 (232-300)||(32194088-32194156)
chr5 (231-298)||(1465028-1465094)
chr5 (226-293)||(3237093-3237160)
chr5 (230-293)||(7984969-7985032)
chr5 (234-297)||(29659347-29659410)
chr5 (241-300)||(31030148-31030207)
chr5 (253-300)||(34117566-34117613)
chr5 (242-293)||(43300878-43300929)
chr5 (156-214)||(1961993-1962051)
chr5 (178-292)||(3977309-3977422)
chr5 (240-298)||(6183439-6183497)
chr5 (232-286)||(36639529-36639583)
chr5 (233-279)||(38104867-38104913)
chr5 (174-294)||(1916246-1916362)
chr5 (232-297)||(18875357-18875422)
chr5 (232-293)||(31694518-31694579)
chr5 (247-300)||(34245717-34245770)
chr5 (234-299)||(39594801-39594866)
chr5 (232-268)||(8177541-8177577)
chr5 (140-216)||(11095413-11095489)
chr5 (242-294)||(11700162-11700214)
chr5 (194-293)||(29925841-29925940)
chr5 (239-291)||(40205090-40205142)
[»] chr7 (40 HSPs)
chr7 (138-295)||(24363516-24363673)
chr7 (187-293)||(19022549-19022655)
chr7 (157-286)||(7244687-7244816)
chr7 (140-293)||(30535563-30535715)
chr7 (138-293)||(34744028-34744182)
chr7 (158-300)||(25670522-25670663)
chr7 (164-268)||(23214880-23214983)
chr7 (157-257)||(24967097-24967196)
chr7 (233-301)||(44821951-44822019)
chr7 (139-300)||(46082027-46082189)
chr7 (239-291)||(48917362-48917414)
chr7 (175-250)||(36537951-36538025)
chr7 (143-301)||(752961-753118)
chr7 (156-293)||(2825170-2825301)
chr7 (234-284)||(25596042-25596092)
chr7 (239-300)||(18965726-18965787)
chr7 (184-293)||(48470044-48470153)
chr7 (230-286)||(529382-529438)
chr7 (175-279)||(43250653-43250755)
chr7 (232-300)||(44151489-44151557)
chr7 (175-286)||(9038119-9038228)
chr7 (254-301)||(18350738-18350785)
chr7 (231-286)||(27378836-27378891)
chr7 (253-300)||(30456480-30456527)
chr7 (230-293)||(33601417-33601479)
chr7 (175-214)||(48131415-48131454)
chr7 (143-185)||(2895343-2895385)
chr7 (223-265)||(26935557-26935599)
chr7 (196-286)||(28614440-28614530)
chr7 (256-298)||(32210262-32210304)
chr7 (240-294)||(47130802-47130856)
chr7 (230-291)||(9423601-9423662)
chr7 (239-284)||(12792579-12792624)
chr7 (239-300)||(46104583-46104644)
chr7 (156-208)||(5288195-5288247)
chr7 (196-287)||(11619131-11619222)
chr7 (232-300)||(15075094-15075162)
chr7 (241-301)||(17944361-17944421)
chr7 (187-287)||(21568459-21568559)
chr7 (201-293)||(39967920-39968012)
[»] chr1 (75 HSPs)
chr1 (156-300)||(31517674-31517817)
chr1 (156-293)||(7136932-7137068)
chr1 (156-284)||(10199342-10199469)
chr1 (227-301)||(34290228-34290302)
chr1 (156-269)||(6292517-6292628)
chr1 (156-279)||(32515375-32515497)
chr1 (232-300)||(23902076-23902144)
chr1 (230-293)||(25479581-25479644)
chr1 (232-300)||(28689461-28689531)
chr1 (156-279)||(37593618-37593740)
chr1 (230-293)||(38503472-38503535)
chr1 (187-301)||(49938739-49938853)
chr1 (187-301)||(2777884-2777997)
chr1 (138-196)||(6231732-6231790)
chr1 (164-285)||(19389909-19390030)
chr1 (201-299)||(37842334-37842431)
chr1 (187-301)||(51695459-51695573)
chr1 (175-300)||(7218027-7218151)
chr1 (232-293)||(26779934-26779995)
chr1 (232-293)||(27140478-27140539)
chr1 (228-301)||(45975682-45975755)
chr1 (230-279)||(46252689-46252738)
chr1 (233-293)||(12564509-12564569)
chr1 (230-297)||(5887001-5887068)
chr1 (230-301)||(35590899-35590970)
chr1 (187-293)||(3233979-3234085)
chr1 (239-293)||(7472311-7472365)
chr1 (230-300)||(14629973-14630043)
chr1 (230-268)||(15361065-15361103)
chr1 (156-218)||(24313610-24313672)
chr1 (239-301)||(43332476-43332538)
chr1 (236-301)||(4700079-4700144)
chr1 (232-300)||(5592694-5592762)
chr1 (137-300)||(37241736-37241899)
chr1 (155-271)||(4768762-4768877)
chr1 (232-292)||(12593462-12593522)
chr1 (232-292)||(47598430-47598490)
chr1 (230-293)||(219558-219621)
chr1 (230-301)||(1510317-1510388)
chr1 (234-297)||(4548717-4548780)
chr1 (230-293)||(10744301-10744364)
chr1 (177-292)||(17269251-17269365)
chr1 (139-218)||(17420277-17420355)
chr1 (143-218)||(18327067-18327142)
chr1 (230-293)||(24915058-24915121)
chr1 (230-301)||(27820344-27820415)
chr1 (223-286)||(28077069-28077132)
chr1 (156-251)||(40413956-40414050)
chr1 (175-250)||(42757130-42757204)
chr1 (230-293)||(51688705-51688767)
chr1 (203-289)||(3924628-3924713)
chr1 (156-218)||(4757412-4757474)
chr1 (258-300)||(5421955-5421997)
chr1 (176-214)||(8810080-8810118)
chr1 (164-218)||(15581328-15581382)
chr1 (164-218)||(28348729-28348783)
chr1 (239-301)||(29793774-29793836)
chr1 (232-286)||(35017583-35017637)
chr1 (232-298)||(35179134-35179200)
chr1 (179-265)||(38170647-38170732)
chr1 (137-214)||(4033932-4034009)
chr1 (230-271)||(8016279-8016320)
chr1 (232-297)||(16322845-16322910)
chr1 (232-297)||(27963379-27963444)
chr1 (227-300)||(28482237-28482310)
chr1 (138-263)||(33723298-33723422)
chr1 (141-218)||(36070255-36070332)
chr1 (234-291)||(38116089-38116146)
chr1 (182-251)||(38578570-38578638)
chr1 (232-293)||(39347976-39348037)
chr1 (231-268)||(47877134-47877171)
chr1 (232-300)||(4622086-4622154)
chr1 (232-300)||(12564883-12564951)
chr1 (232-300)||(27887127-27887195)
chr1 (232-300)||(30371141-30371209)
[»] chr4 (69 HSPs)
chr4 (156-293)||(28615334-28615470)
chr4 (174-300)||(2996566-2996691)
chr4 (187-297)||(52315161-52315271)
chr4 (230-301)||(17884060-17884131)
chr4 (156-300)||(18628487-18628620)
chr4 (167-290)||(4798511-4798633)
chr4 (234-300)||(16494816-16494882)
chr4 (139-293)||(21731573-21731726)
chr4 (156-296)||(42641573-42641714)
chr4 (157-211)||(51555705-51555759)
chr4 (232-286)||(53673667-53673721)
chr4 (140-300)||(42866061-42866220)
chr4 (230-301)||(7694017-7694088)
chr4 (230-293)||(17822872-17822935)
chr4 (142-265)||(32831438-32831559)
chr4 (241-300)||(36722687-36722746)
chr4 (230-301)||(49202637-49202708)
chr4 (234-300)||(10192277-10192342)
chr4 (239-297)||(11158373-11158431)
chr4 (230-292)||(29263371-29263433)
chr4 (156-266)||(33534103-33534212)
chr4 (230-284)||(40532601-40532655)
chr4 (230-284)||(47145971-47146025)
chr4 (156-209)||(1017111-1017164)
chr4 (177-266)||(1137739-1137827)
chr4 (187-300)||(23819082-23819194)
chr4 (241-290)||(30668384-30668433)
chr4 (156-249)||(37575870-37575962)
chr4 (240-293)||(47800623-47800676)
chr4 (230-291)||(55084488-55084549)
chr4 (238-294)||(1404416-1404472)
chr4 (256-300)||(27970051-27970095)
chr4 (232-300)||(49219132-49219200)
chr4 (253-301)||(56480340-56480388)
chr4 (232-299)||(11802528-11802595)
chr4 (165-216)||(22471350-22471401)
chr4 (156-215)||(25487491-25487550)
chr4 (143-217)||(8328040-8328114)
chr4 (234-292)||(17975380-17975438)
chr4 (163-205)||(22772417-22772459)
chr4 (156-218)||(24087410-24087472)
chr4 (156-218)||(24091537-24091599)
chr4 (195-261)||(25332807-25332873)
chr4 (179-293)||(27721717-27721830)
chr4 (234-300)||(30207582-30207648)
chr4 (165-215)||(39178209-39178259)
chr4 (230-300)||(43824276-43824346)
chr4 (141-291)||(46019548-46019697)
chr4 (204-266)||(46110230-46110291)
chr4 (156-297)||(46415725-46415866)
chr4 (178-300)||(50799986-50800106)
chr4 (233-271)||(53792593-53792631)
chr4 (234-279)||(2592320-2592365)
chr4 (232-277)||(5131259-5131304)
chr4 (234-279)||(14011248-14011293)
chr4 (241-278)||(30377433-30377470)
chr4 (232-293)||(34398694-34398755)
chr4 (224-293)||(35405947-35406016)
chr4 (238-300)||(44638187-44638250)
chr4 (140-265)||(51560207-51560331)
chr4 (146-214)||(3549479-3549547)
chr4 (232-300)||(8468941-8469009)
chr4 (230-286)||(24169270-24169326)
chr4 (167-211)||(24718746-24718790)
chr4 (201-301)||(28300278-28300377)
chr4 (140-216)||(42641416-42641492)
chr4 (257-293)||(44797886-44797922)
chr4 (230-286)||(49803215-49803271)
chr4 (241-293)||(52259631-52259683)
[»] chr6 (40 HSPs)
chr6 (163-287)||(10031738-10031861)
chr6 (195-301)||(20368153-20368258)
chr6 (156-297)||(35070401-35070541)
chr6 (246-301)||(31812036-31812091)
chr6 (195-300)||(4006707-4006811)
chr6 (188-300)||(34910374-34910486)
chr6 (232-300)||(2160946-2161014)
chr6 (150-218)||(27857432-27857500)
chr6 (198-298)||(31624085-31624184)
chr6 (230-300)||(6647380-6647450)
chr6 (239-301)||(9093572-9093634)
chr6 (156-218)||(26559173-26559235)
chr6 (138-184)||(31672445-31672491)
chr6 (231-301)||(34430469-34430539)
chr6 (176-261)||(769170-769254)
chr6 (230-291)||(4420645-4420706)
chr6 (239-300)||(33787761-33787822)
chr6 (239-295)||(5564144-5564200)
chr6 (199-263)||(31420975-31421038)
chr6 (147-211)||(34429639-34429703)
chr6 (230-301)||(415296-415367)
chr6 (175-270)||(30863269-30863363)
chr6 (239-285)||(835265-835311)
chr6 (158-268)||(7945820-7945929)
chr6 (232-301)||(29296304-29296371)
chr6 (156-214)||(31774455-31774513)
chr6 (238-300)||(32386578-32386640)
chr6 (170-292)||(34403856-34403977)
chr6 (241-298)||(837234-837291)
chr6 (239-296)||(1497978-1498035)
chr6 (156-197)||(7351605-7351646)
chr6 (232-265)||(9027606-9027639)
chr6 (240-301)||(26694870-26694931)
chr6 (232-285)||(27909647-27909700)
chr6 (232-293)||(32386115-32386176)
chr6 (233-301)||(1401101-1401169)
chr6 (243-287)||(2205610-2205654)
chr6 (201-293)||(2455259-2455351)
chr6 (139-191)||(4325222-4325274)
chr6 (233-269)||(7785754-7785790)
[»] chr2 (74 HSPs)
chr2 (139-214)||(41170688-41170763)
chr2 (156-286)||(8017441-8017570)
chr2 (143-301)||(40158710-40158867)
chr2 (170-279)||(12313121-12313229)
chr2 (147-279)||(33192216-33192346)
chr2 (230-286)||(35379023-35379079)
chr2 (230-301)||(1625892-1625963)
chr2 (178-279)||(43199740-43199840)
chr2 (241-301)||(43985021-43985081)
chr2 (140-301)||(33941901-33942058)
chr2 (227-293)||(16867739-16867805)
chr2 (158-216)||(40776033-40776091)
chr2 (223-284)||(44443330-44443391)
chr2 (175-271)||(5902502-5902597)
chr2 (156-300)||(14666541-14666684)
chr2 (193-269)||(28677630-28677705)
chr2 (248-300)||(36863650-36863702)
chr2 (139-211)||(44064517-44064589)
chr2 (193-261)||(44606081-44606148)
chr2 (141-216)||(4350766-4350841)
chr2 (242-301)||(9477944-9478003)
chr2 (230-293)||(38078417-38078480)
chr2 (230-301)||(43911006-43911077)
chr2 (176-286)||(8187407-8187516)
chr2 (156-214)||(29430836-29430894)
chr2 (230-271)||(7928306-7928347)
chr2 (238-299)||(44590028-44590089)
chr2 (233-301)||(656787-656855)
chr2 (241-301)||(1810657-1810716)
chr2 (156-300)||(14299565-14299708)
chr2 (231-287)||(15977991-15978047)
chr2 (233-293)||(18840796-18840856)
chr2 (241-293)||(29510592-29510644)
chr2 (164-300)||(35485910-35486045)
chr2 (203-271)||(36043926-36043994)
chr2 (241-301)||(40279189-40279249)
chr2 (184-301)||(2142645-2142763)
chr2 (230-293)||(9174815-9174878)
chr2 (141-216)||(11513972-11514047)
chr2 (164-287)||(15120189-15120311)
chr2 (164-263)||(16551782-16551880)
chr2 (230-293)||(29316782-29316845)
chr2 (230-301)||(29628750-29628821)
chr2 (241-300)||(39983335-39983394)
chr2 (205-292)||(40279268-40279355)
chr2 (205-292)||(40279338-40279425)
chr2 (230-293)||(41851535-41851598)
chr2 (234-292)||(3078651-3078709)
chr2 (231-293)||(6772528-6772590)
chr2 (232-298)||(10563567-10563633)
chr2 (231-293)||(11488277-11488339)
chr2 (164-218)||(12140606-12140660)
chr2 (156-218)||(13866952-13867014)
chr2 (164-218)||(40145526-40145580)
chr2 (175-277)||(41809198-41809299)
chr2 (209-290)||(1056116-1056196)
chr2 (228-261)||(1493518-1493551)
chr2 (231-292)||(7871644-7871705)
chr2 (226-295)||(12289795-12289864)
chr2 (220-269)||(19333322-19333371)
chr2 (230-271)||(35378539-35378580)
chr2 (227-292)||(39236499-39236564)
chr2 (239-292)||(40279408-40279461)
chr2 (139-216)||(40400817-40400894)
chr2 (205-290)||(43065433-43065517)
chr2 (143-216)||(43530032-43530105)
chr2 (231-287)||(3227691-3227747)
chr2 (233-293)||(6227751-6227811)
chr2 (232-284)||(9530737-9530789)
chr2 (241-301)||(14364197-14364257)
chr2 (240-288)||(24097813-24097861)
chr2 (230-298)||(33942145-33942213)
chr2 (232-284)||(34652045-34652097)
chr2 (158-210)||(34927045-34927097)
[»] chr8 (51 HSPs)
chr8 (230-300)||(9956821-9956891)
chr8 (156-265)||(6950350-6950458)
chr8 (141-218)||(2487927-2488004)
chr8 (139-216)||(16162836-16162913)
chr8 (139-298)||(7918699-7918848)
chr8 (230-293)||(27028831-27028894)
chr8 (175-293)||(7714242-7714359)
chr8 (230-284)||(42215089-42215143)
chr8 (176-293)||(778389-778505)
chr8 (156-301)||(34849095-34849240)
chr8 (230-286)||(20672757-20672813)
chr8 (232-300)||(28769348-28769416)
chr8 (230-290)||(30918116-30918176)
chr8 (231-299)||(43717945-43718013)
chr8 (156-211)||(1664450-1664505)
chr8 (188-286)||(779027-779124)
chr8 (230-300)||(30389092-30389162)
chr8 (156-286)||(44236757-44236886)
chr8 (233-290)||(4762512-4762569)
chr8 (232-301)||(8062321-8062390)
chr8 (232-293)||(11569466-11569527)
chr8 (232-301)||(31862485-31862554)
chr8 (232-301)||(38421256-38421325)
chr8 (164-293)||(43504751-43504879)
chr8 (230-294)||(1930034-1930098)
chr8 (233-293)||(11745662-11745722)
chr8 (233-293)||(27754404-27754464)
chr8 (232-300)||(31705078-31705146)
chr8 (236-300)||(31804467-31804531)
chr8 (156-211)||(1892158-1892213)
chr8 (175-287)||(12851182-12851295)
chr8 (230-293)||(33714243-33714306)
chr8 (230-292)||(2595004-2595066)
chr8 (156-210)||(4560584-4560638)
chr8 (230-300)||(5069690-5069760)
chr8 (188-290)||(7918412-7918513)
chr8 (230-300)||(8060662-8060732)
chr8 (230-276)||(21653098-21653144)
chr8 (227-293)||(37353253-37353319)
chr8 (231-301)||(38648343-38648413)
chr8 (241-298)||(6864477-6864534)
chr8 (231-284)||(11494155-11494208)
chr8 (239-300)||(11795085-11795146)
chr8 (161-210)||(13652298-13652347)
chr8 (161-210)||(13710941-13710990)
chr8 (156-293)||(30191075-30191211)
chr8 (232-293)||(30277254-30277315)
chr8 (156-293)||(39551143-39551279)
chr8 (148-216)||(2213484-2213552)
chr8 (230-294)||(11185220-11185284)
chr8 (240-292)||(39881769-39881821)
[»] chr3 (59 HSPs)
chr3 (165-286)||(30573857-30573977)
chr3 (164-300)||(43115049-43115184)
chr3 (140-203)||(30657375-30657438)
chr3 (195-301)||(39602183-39602288)
chr3 (193-293)||(21367667-21367767)
chr3 (139-216)||(44014715-44014792)
chr3 (156-268)||(24281072-24281183)
chr3 (230-298)||(40665424-40665492)
chr3 (230-301)||(402549-402620)
chr3 (181-300)||(14548680-14548798)
chr3 (188-291)||(54837000-54837102)
chr3 (156-214)||(41848650-41848708)
chr3 (176-301)||(45541563-45541687)
chr3 (201-301)||(1816575-1816674)
chr3 (246-293)||(18405854-18405901)
chr3 (230-293)||(20669172-20669235)
chr3 (230-293)||(25776117-25776180)
chr3 (230-293)||(33883757-33883820)
chr3 (230-297)||(34610813-34610880)
chr3 (230-293)||(36887504-36887567)
chr3 (187-286)||(37273141-37273239)
chr3 (191-294)||(51130749-51130851)
chr3 (230-293)||(53789468-53789531)
chr3 (232-298)||(1217809-1217875)
chr3 (232-286)||(2719475-2719529)
chr3 (140-300)||(11253495-11253653)
chr3 (140-208)||(25459548-25459616)
chr3 (233-301)||(34382934-34383002)
chr3 (232-284)||(34924547-34924599)
chr3 (191-271)||(47249455-47249534)
chr3 (180-276)||(47513670-47513765)
chr3 (230-293)||(39980729-39980792)
chr3 (233-292)||(41633361-41633420)
chr3 (156-263)||(42745068-42745174)
chr3 (138-185)||(44237524-44237571)
chr3 (141-300)||(48286729-48286887)
chr3 (241-291)||(2825149-2825199)
chr3 (201-299)||(24085316-24085414)
chr3 (164-218)||(50211809-50211863)
chr3 (193-299)||(50600149-50600254)
chr3 (230-300)||(52618996-52619066)
chr3 (235-300)||(1125778-1125843)
chr3 (187-268)||(21574515-21574595)
chr3 (232-293)||(25185985-25186046)
chr3 (140-213)||(35903085-35903158)
chr3 (156-197)||(40665514-40665555)
chr3 (231-300)||(44061032-44061100)
chr3 (232-269)||(48991875-48991912)
chr3 (232-284)||(16790387-16790439)
chr3 (232-276)||(21862184-21862228)
chr3 (253-293)||(22203430-22203470)
chr3 (232-300)||(23785248-23785316)
chr3 (230-286)||(24785212-24785268)
chr3 (156-208)||(25447625-25447677)
chr3 (147-263)||(26330248-26330363)
chr3 (232-268)||(34414793-34414829)
chr3 (166-218)||(48397651-48397703)
chr3 (156-216)||(49465599-49465659)
chr3 (161-221)||(50015957-50016017)
[»] scaffold0286 (1 HSPs)
scaffold0286 (232-300)||(16103-16171)
[»] scaffold0199 (1 HSPs)
scaffold0199 (156-211)||(6891-6946)
[»] scaffold0141 (1 HSPs)
scaffold0141 (156-218)||(9712-9774)
[»] scaffold0147 (1 HSPs)
scaffold0147 (230-279)||(4942-4991)
[»] scaffold0064 (1 HSPs)
scaffold0064 (139-204)||(53758-53823)
[»] scaffold0003 (1 HSPs)
scaffold0003 (232-290)||(306329-306387)


Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 10 - 301
Target Start/End: Complemental strand, 7908165 - 7907873
Alignment:
Q  10 aagaaaataacat-gaatgaaggaacatacctgctgaattgcaccaggaccaaactgtggaaagcaatgtgggatacctccactgttccagaagaaaatt 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7908165 aagaaaataacattgaatgaaggaacatacctgctgaattgcaccaggaccaaactgtggaaagcaatgtgggatacctccactgttccagaagaaaatt 7908066  T
Q  109 aatcagtatccaagggatcccaaatgagaacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaactta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  7908065 aatcagtatccaagggatcccaaatgagaacctgtttgaattggttcatttgagtttatctaataacataaacacttatgagactgtttggaagaactta 7907966  T
Q  209 tgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7907965 tgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 7907873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 188 - 301
Target Start/End: Complemental strand, 2568762 - 2568650
Alignment:
Q  188 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||| ||||| |||||||||||||||||| | || ||| ||||||||||||| |||| |||||| |||||| ||||||||| || ||||||| |||||||    
T  2568762 gagactgtttagaagaacttatgaaaacagctta-tgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaa 2568664  T
Q  288 cttataacttatac 301  Q
    |||||| |||||||    
T  2568663 cttatagcttatac 2568650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 292
Target Start/End: Original strand, 17258817 - 17258952
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||| |||||||||| ||||| ||| ||| ||||| ||||| |||||||| | | || ||| || |||||||| ||||||||||||| |||    
T  17258817 atttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaatagctta-tgacatgttcataagctgttttcagcttatttt 17258915  T
Q  256 cataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||| || || || |||| |||||| |||||    
T  17258916 cataagctcttcaggatagtttatgaaaacagcttat 17258952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 10272442 - 10272509
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||| |||||||| ||||||||||  |||||| ||||||||||||| |||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatac 10272509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 301
Target Start/End: Complemental strand, 34975498 - 34975356
Alignment:
Q  158 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 257  Q
    ||||| |||||||||||||||| ||||||||||| |||||| |||| || ||  |||||  ||| ||| |||| ||||| | |||||||||||| || ||    
T  34975498 ttgagcttatctactaacataatcacttatgagactgtttgaaagagctcatccaaacatagta-tgacatatccataaatcgttttcagcttatttcca 34975400  T
Q  258 taagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    | ||||||||| || ||||||  ||||||| ||||| |||||||    
T  34975399 ttagctctccaggatagcttacgaaaacaatttatagcttatac 34975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 164 - 293
Target Start/End: Original strand, 12459943 - 12460071
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    |||||| || |||||| ||| | ||||| ||||||| ||||| |||||||||||| || ||| || |||||| ||||||||  ||||| |||||||||||    
T  12459943 ttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaactta-tgacatgttcatatgttgtttttggcttattttcataagct 12460041  T
Q  264 ctccaagacagcttatcaaaacaacttata 293  Q
    || ||||| ||||| | || ||||||||||    
T  12460042 ctgcaagatagcttgtgaagacaacttata 12460071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 37611175 - 37611279
Alignment:
Q  182 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatca 281  Q
    |||| ||||||||||||  ||| |||||||||||||| |  ||| || |||||||| ||||||||| ||| || |||||||||||||||| ||||||| |    
T  37611175 acttgtgagattgtttgagagagcttatgaaaacaacttg-tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatga 37611273  T
Q  282 aaacaa 287  Q
    ||||||    
T  37611274 aaacaa 37611279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 287
Target Start/End: Original strand, 37787905 - 37788009
Alignment:
Q  182 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatca 281  Q
    |||| ||||||||||||  ||| |||||||||||||| |  ||| || |||||||| ||||||||| ||| || |||||||||||||||| ||||||| |    
T  37787905 acttgtgagattgtttgagagagcttatgaaaacaacttg-tgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatga 37788003  T
Q  282 aaacaa 287  Q
    ||||||    
T  37788004 aaacaa 37788009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 293
Target Start/End: Original strand, 16937799 - 16937953
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataa 236  Q
    ||||||||| ||||| | ||||||| |||||||||| |||||    || ||||| |||||||||||||||||||||||| | || ||| ||  |||||||    
T  16937799 acctgtttggattggcttatttgagcttatctactagcataagtt-ttgtgagagtgtttggaagaacttatgaaaacagctta-tgacaaatttcataa 16937896  T
Q  237 gttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    | | ||||||||||| |||| |||| ||||||| | ||| ||| |||||||||||||    
T  16937897 gcttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttata 16937953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 17368767 - 17368676
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||| || ||| || |||||| |  |||||||||||| || ||||| |||||||||| ||||||| |||||||||||||    
T  17368767 agaacttatgaaaacaactta-tgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttata 17368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 18543210 - 18543273
Alignment:
Q  236 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||| ||||||    
T  18543210 agttgttttcagctta-tttcataagctctccaggatagcttatgaaaacaacttatatcttata 18543273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 4014431 - 4014493
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||| |||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 13244485 - 13244547
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||||||||| | | |||||||||||||| | ||||||||||| ||||||||||||||    
T  13244485 atttgagtttatctattgaaataaacacttatgacactgtttggaagagcttatgaaaacaac 13244547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 33533543 - 33533609
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| |||| || |||||||||||||||| ||||| | |||||| ||||||    
T  33533543 atattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttata 33533609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 268
Target Start/End: Original strand, 10125643 - 10125763
Alignment:
Q  147 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 246  Q
    |||||| | |||| || ||||||||| |||| | ||||| ||| ||||| ||  |||||||||| ||||||| || ||| || || ||||| ||||||||    
T  10125643 aattggcttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaactta-tgacatgttgataaggtgttttca 10125741  T
Q  247 gcttaatttcataagctctcca 268  Q
    ||||| ||||||||||||||||    
T  10125742 gcttattttcataagctctcca 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 37526164 - 37526276
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| ||||||  ||| |||||||| ||||| || ||| || || ||||| ||||||||||||| || |||||||||||||  ||| ||||| ||||||    
T  37526164 tgagactgtttgagagagcttatgaatacaaccta-tgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaaca 37526262  T
Q  287 acttataacttata 300  Q
    ||||||| ||||||    
T  37526263 acttatagcttata 37526276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 300
Target Start/End: Original strand, 37588325 - 37588437
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| ||||||  ||| |||||||| ||||| || |||||| || ||||| ||||||||||||| || |||||||||||||  | | ||||| ||||||    
T  37588325 tgagactgtttgagagagcttatgaatacaaccta-tgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaaca 37588423  T
Q  287 acttataacttata 300  Q
    ||||||| ||||||    
T  37588424 acttatagcttata 37588437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 11707115 - 11707055
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||||||| ||||| ||||||| ||||| ||||||| |||||| ||||||    
T  11707115 ataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 12425631 - 12425563
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||| |||| ||||||||| ||||||||| ||||| | |||||| |||||| |||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatac 12425563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 7674753 - 7674655
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| || ||||||||||||||| ||||||| || ||| || || ||||| ||||||||||||| ||||| ||  ||||||||| ||||||| ||||||    
T  7674753 tgagactgcttggaagaacttatggaaacaactta-tgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaaca 7674655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 8090064 - 8089958
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    ||||||||||||| || ||||   |||| | ||||  ||| |||||||||||||| || ||| |||||| |||| ||||||||||||| |||||||||||    
T  8090064 ttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaactta-tgatatattcctaagctgttttcagcttattttcataagct 8089966  T
Q  264 ctccaaga 271  Q
    || |||||    
T  8089965 cttcaaga 8089958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 12242723 - 12242774
Alignment:
Q  236 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||||    
T  12242723 agttgttttcagcttacttccataagctctccaagatagcttatgaaaacaa 12242774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 36318833 - 36318766
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||| ||||||||||||| || |||||  ||||||||| ||||||| ||||||||||| |||||||||    
T  36318833 taagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaacttatac 36318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 36326070 - 36326003
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||| || |||||  ||||||||| ||||||  ||| |||||||||||||||||    
T  36326070 taagttgttttcagcttatttacataaattctccaagatagcttacgaaagcaacttataacttatac 36326003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 7319017 - 7319071
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||| ||||||    
T  7319017 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 7319071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 18857358 - 18857470
Alignment:
Q  182 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag--ctctccaagacagcttat 279  Q
    |||| ||||| || || |||||| ||||||||||| | || ||| || |||||||| |||||| | |||||||||||||   ||||||||||||||||||    
T  18857358 acttgtgagaatgcttagaagaatttatgaaaacagc-taatgacatgttcataagctgtttttaacttaatttcataacacctctccaagacagcttat 18857456  T
Q  280 caaaacaacttata 293  Q
     |||||| ||||||    
T  18857457 gaaaacagcttata 18857470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 35095721 - 35095774
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 210  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||    
T  35095721 atttgagtttatctactaa-ataaacactaatgagactgtttggaagagcttatg 35095774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 41112832 - 41112941
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||||||||  ||||||||||| ||| ||||| ||| |||||||||||||| | | | |||| || ||| |||  ||||||| ||||| |||    
T  41112832 atttgagcttatctacttgcataaacacttgtgacattgtctggcagaacttatgaaaatagc-ttctgacatgttcgtaatctgttttcggcttatttt 41112930  T
Q  256 cataagctctc 266  Q
    |||||||||||    
T  41112931 cataagctctc 41112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 41957460 - 41957526
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||||||| |||| ||||||||| |||| | || ||||||| |||||| |||||||||||    
T  41957460 cataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataactta 41957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 194
Target Start/End: Original strand, 36542205 - 36542258
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattg 194  Q
    |||||||||||| |  |||||| |||||||||||||||| ||||||||||||||    
T  36542205 tgtttgaattggcttgtttgagcttatctactaacataagcacttatgagattg 36542258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 301
Target Start/End: Original strand, 6587078 - 6587185
Alignment:
Q  193 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    ||||||||||||||||  |||||| | || ||| |  |||||||| ||||| ||||||| ||||| ||| ||||||  | ||||||| ||||||||||||    
T  6587078 tgtttggaagaacttaaaaaaacagctta-tgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttat 6587176  T
Q  293 aacttatac 301  Q
    | |||||||    
T  6587177 agcttatac 6587185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 6593351 - 6593299
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||| |||||||||||||| |||  |||||||||||||| ||||||    
T  6593351 ttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttata 6593299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 12975407 - 12975340
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||| || ||| |||||| ||||||    
T  12975407 cataagttgttttcaactta-ttccataagctctccaagatagcttatgaacacagcttatagcttata 12975340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 17827615 - 17827524
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||| || |||||| ||| ||| || ||||||||||| |||| ||| ||||| |||| ||||||  |||||||||||||    
T  17827615 agaacttaggaaaacaactta-tgaaatgttcgtaaattattttcagcttattttcgtaacctctctaagatagcttacaaaaacaacttata 17827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 25461143 - 25461083
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||| |||||| || ||||||| | ||||||| ||||||||||||||| |||||    
T  25461143 ttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatac 25461083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 300
Target Start/End: Complemental strand, 32172789 - 32172646
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||| ||||| ||||| ||||| |||||| |||||| ||| |||||| ||||||| || ||| || | ||||||   ||||||||||| ||     
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaactta-tgacatgtccataagccattttcagcttatttc 32172691  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||| || ||| || || ||||||| |||||| |||||| ||||||    
T  32172690 cattagttcttcatgatagcttatgaaaacagcttatagcttata 32172646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 32194088 - 32194156
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| ||  |||||||||| |||| ||||||  |||||| |||||| ||||||    
T  32194088 cataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagcttata 32194156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 298
Target Start/End: Original strand, 1465028 - 1465094
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||||||||||||| ||||| |||  |||||||| ||||||| |||| |||||||| ||||    
T  1465028 tcataagttgttttcagcttattttcacaagtcctccaagatagcttat-aaaataacttatagctta 1465094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 293
Target Start/End: Complemental strand, 3237160 - 3237093
Alignment:
Q  226 aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||| |||||| || |||||||||||||  | || ||||||| |||||| ||||||    
T  3237160 aatattcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaacagcttata 3237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 7985032 - 7984969
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||||||| ||||||||  ||||||||| ||||||| |||| | ||||||    
T  7985032 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttata 7984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 29659410 - 29659347
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    |||||||||||||||||| ||  |||| ||||| |||| | ||||| |||||||||||||||||    
T  29659410 taagttgttttcagcttatttatataaactctctaagataacttatgaaaacaacttataactt 29659347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 31030148 - 31030207
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||| || ||||||||||||| |||||||||  ||||| ||||||| ||||||    
T  31030148 ttttcagcttatttccataagctctccaggacagcttaggaaaactacttatagcttata 31030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 34117566 - 34117613
Alignment:
Q  253 tttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||||||| ||||||| ||| ||||||||| ||||||    
T  34117566 tttcataagctctccaagatagcttatgaaagcaacttatagcttata 34117613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 293
Target Start/End: Complemental strand, 43300929 - 43300878
Alignment:
Q  242 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||| ||||||||| ||||||||| ||||||  |||||||||||||    
T  43300929 tttcagcttattttcataagttctccaagatagcttacaaaaacaacttata 43300878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 1962051 - 1961993
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    ||||||||||||||||| | |||||||||| ||||| |||| |||| | ||||||||||    
T  1962051 atttgagtttatctactcatataaacacttgtgagaatgttcggaatagcttatgaaaa 1961993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 3977422 - 3977309
Alignment:
Q  178 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 277  Q
    |||||||| ||||||||||| ||| |||||||||||||| | || ||| || ||| | || ||| ||||||||| ||||||||  ||||||  ||| |||    
T  3977422 aaacacttgtgagattgtttagaaaaacttatgaaaacagctta-tgacatgttccttagctgtcttcagcttattttcataatttctccacaacaactt 3977324  T
Q  278 atcaaaacaacttat 292  Q
    || |||||| |||||    
T  3977323 atgaaaacagcttat 3977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 6183497 - 6183439
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    |||||||||||| || |||||||||||||| ||||||||| || ||| |||||| ||||    
T  6183497 gttttcagcttatttccataagctctccaaaacagcttatgaatacagcttatagctta 6183439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 36639583 - 36639529
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||||||  |||| ||||||||||||| ||||| ||||||| ||||||    
T  36639583 cataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaaca 36639529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 38104867 - 38104913
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttat 279  Q
    ||||||||||||||||||| || ||||||||||| |||| |||||||    
T  38104867 ataagttgttttcagcttatttccataagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 294
Target Start/End: Complemental strand, 1916362 - 1916246
Alignment:
Q  174 acataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagaca 273  Q
    ||||||||||||  ||||||||||| |||| ||| |||||||||| || | | ||||  ||||||| |||||||||| ||||| |||  ||||||||| |    
T  1916362 acataaacactt--gagattgtttgaaagagcttgtgaaaacaactta-taatatatctataagttattttcagctt-atttcctaaaatctccaagata 1916267  T
Q  274 gcttatcaaaacaacttataa 294  Q
    | | || ||||||||||||||    
T  1916266 gttcatgaaaacaacttataa 1916246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 18875422 - 18875357
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||||||| |||  || ||||||||||||| || | ||||| |||||| ||||||||||    
T  18875422 cataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataactt 18875357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 31694579 - 31694518
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||| |||| ||||||||||||| ||||  ||||||  | |||||||||||    
T  31694579 cataagttgttttcaacttattttcataagctctacaagtgagcttaagagaacaacttata 31694518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 34245770 - 34245717
Alignment:
Q  247 gcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||| |||||| ||||||||| || ||||||| ||||||||||||| ||||||    
T  34245770 gcttattttcatcagctctccatgatagcttataaaaacaacttatagcttata 34245717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 39594866 - 39594801
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    |||||||||||||||||| ||||||||| ||  ||||| | ||||| |||||| |||| |||||||    
T  39594866 taagttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttat 39594801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 8177541 - 8177577
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctcca 268  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  8177541 cataagttgttttcaggttattttcataagctctcca 8177577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 11095413 - 11095489
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    ||||||| | ||||| |||| || ||||||||| |||||||||||| ||| ||||||||  ||||||| || |||||    
T  11095413 ctgtttggactggtttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaaca 11095489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 11700214 - 11700162
Alignment:
Q  242 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||| |||| ||||||||| |||||| || ||| ||||||||||||||||||    
T  11700214 tttcatcttattttcataagttctccacgatagcatatcaaaacaacttataa 11700162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 293
Target Start/End: Complemental strand, 29925940 - 29925841
Alignment:
Q  194 gtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||| |||||||||||||||| | || ||| ||| |||||  ||| |||||| |||| ||||||||| ||||||| | |||||||  |||||||||||    
T  29925940 gtttgggagaacttatgaaaacagctta-tgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttat 29925842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 40205090 - 40205142
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    ||||||||||||| ||  |||||||||||| || ||||||| |||||||||||    
T  40205090 tgttttcagcttatttctataagctctccaggatagcttatgaaaacaactta 40205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 295
Target Start/End: Original strand, 24363516 - 24363673
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataag 237  Q
    ||||||||| |||| || |||||||||||||||||| ||||| |||||||||||| |||||| ||  |||| | |||||| ||| ||| || | ||||||    
T  24363516 acctgtttggattgttttatttgagtttatctactagcataagcacttatgagatagtttgggaggccttaaggaaacaaggtattgacatgtccataag 24363615  T
Q  238 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 295  Q
    |||||||||||||| || ||||| ||||||| || ||||||| |||||||||||||||    
T  24363616 ttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataac 24363673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 19022549 - 19022655
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 285  Q
    ||||||||||||| |||| ||||||||||||| || ||| ||| |||||||||||| |||| |||| ||||||||| ||||||| | ||||||| |||||    
T  19022549 tgagattgtttgggagaatttatgaaaacaactta-tgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaac 19022647  T
Q  286 aacttata 293  Q
    ||||||||    
T  19022648 aacttata 19022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 286
Target Start/End: Complemental strand, 7244816 - 7244687
Alignment:
Q  157 tttgagtttatctactaacataaacacttatgagatt-gtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||||||||||||  ||||||||||| | ||||| ||||| |||| || ||| ||||||  || ||| ||  ||||||||||||||||||||| |||    
T  7244816 tttgagtttatctactgccataaacacttctaagatttgtttgaaagagctgatggaaacaattta-tgacatgctcataagttgttttcagcttatttt 7244718  T
Q  256 cataagctctccaagacagcttatcaaaaca 286  Q
    |||||||||||||| | ||||||| ||||||    
T  7244717 cataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 140 - 293
Target Start/End: Complemental strand, 30535715 - 30535563
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 239  Q
    ||||||||||||  | ||||||||| || |||| ||||||||||||  |||| ||||| | |||||||||||||||||| || ||| || ||| |||| |    
T  30535715 ctgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaactta-tgatatgttcgtaagct 30535617  T
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||| ||||||| | |||  |||| |||||||  ||||| ||||||    
T  30535616 gttttcaggttattttcatatgttctataagatagcttatggaaacagcttata 30535563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 293
Target Start/End: Complemental strand, 34744182 - 34744028
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataa 236  Q
    ||||||||||||||  | ||||||| |||||||||||||| || | || ||||| |||||||||||||| ||||||| ||| || ||| ||| |||| ||    
T  34744182 acctgtttgaattgaataatttgagcttatctactaacat-aagatttgtgagactgtttggaagaactaatgaaaagaactta-tgacaattttcacaa 34744085  T
Q  237 gttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    | | |||||  |||| ||| ||||| ||||||| | ||||||| |||||||||||||    
T  34744084 gcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttata 34744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 300
Target Start/End: Original strand, 25670522 - 25670663
Alignment:
Q  158 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 257  Q
    ||||| ||||||| | |||||| | ||| ||||| ||||||  | |||||||||||||||| || ||| || || |||| |||||||||||||| |||||    
T  25670522 ttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaactta-tgacatgttaataaattgttttcagcttattttca 25670620  T
Q  258 taagctctccaagacagcttatcaaaacaacttataacttata 300  Q
     ||||||||||||| |  |||| ||||||| | ||| ||||||    
T  25670621 caagctctccaagatatgttataaaaacaattgatagcttata 25670663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 23214983 - 23214880
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    |||||||||| ||||||||||||||||| ||||||  |||| ||||||||||||| || ||| || | |||||| | | |||||||||  |||||||| |    
T  23214983 ttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaactta-tgacatttccataagctctattcagcttatgttcataagat 23214885  T
Q  264 ctcca 268  Q
    |||||    
T  23214884 ctcca 23214880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 24967196 - 24967097
Alignment:
Q  157 tttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttc 256  Q
    |||||| ||||||||||  ||||||| |||||||| |||||||||||  ||||| ||||||| || | | |||| || ||||||||||||||||| ||||    
T  24967196 tttgagcttatctactagtataaacatttatgagactgtttggaagagattatggaaacaactta-taacatatccagaagttgttttcagcttattttc 24967098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 44822019 - 44821951
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||| |||| ||||||||| ||||||  | ||||||| |||||| ||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatac 44821951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 46082189 - 46082027
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 238  Q
    |||||||| ||||| | ||||||  ||| |||||  |||||||| || ||||| ||||    ||| |||||||||||||| || ||| ||   |||||||    
T  46082189 cctgtttggattggctaatttgatcttacctactggcataaacaattttgagactgttaatgagagcttatgaaaacaactta-tgacatgaccataagt 46082091  T
Q  239 tgttttcagcttaatttcataagctctccaagacagc--ttatcaaaacaacttataacttata 300  Q
    ||||||||||||| ||||||||||||||||  | |||   ||| ||||||||||||||||||||    
T  46082090 tgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataacttata 46082027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 48917362 - 48917414
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| |||||||||||    
T  48917362 tgtttccagcttattttcataagctctccaagatagcttatgaaaacaactta 48917414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 36538025 - 36537951
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctt 250  Q
    ||||||||||| ||||||||||||  |||||||||| ||||||| || ||| || ||||||||||||||| |||||    
T  36538025 cataaacacttgtgagattgtttgagagaacttatggaaacaactta-tgacatgttcataagttgtttttagctt 36537951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 301
Target Start/End: Complemental strand, 753118 - 752961
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtt 242  Q
    ||||| |||| | ||||||| |||||||||  ||||| ||| | | ||| || ||| |||||||||||||||||   || ||| ||||  ||||| ||||    
T  753118 tttgatttggcttatttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaacagttta-tgacatatcaataagctgtt 753020  T
Q  243 ttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    || |||| | ||||||| |||| |||||| || ||||||||||| |||||| |||||||    
T  753019 tttagctaattttcatatgctccccaagatagtttatcaaaacagcttatagcttatac 752961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 2825170 - 2825301
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||||| | |||| ||||| ||||| | ||||||||||||||||||| || | |      || |||||||||| ||||||||||| ||     
T  2825170 atttgagcttatctacttatataagcacttgtgagactctttggaagaacttatgaaaccatctt------atgttcataagttattttcagcttatttc 2825263  T
Q  256 cataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||| |||| | || ||||| | |||||||||||||    
T  2825264 cataagttctctaggatagcttgtgaaaacaacttata 2825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 25596092 - 25596042
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||| ||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaaa 25596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 18965726 - 18965787
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||  |||||||||  |||||||| ||||||| ||||||||||||||| ||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaacaacttataacctata 18965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 48470153 - 48470044
Alignment:
Q  184 ttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaa 283  Q
    |||||||||||||||| |||||||||||||||| | ||  | | | |||||||| | |||| ||||||  |||||||| | | ||| | ||||||| |||    
T  48470153 ttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaa 48470054  T
Q  284 acaacttata 293  Q
    ||||||||||    
T  48470053 acaacttata 48470044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 529438 - 529382
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||| |||||||| | || ||||||||||||||||||| ||||||| ||||||    
T  529438 ttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaaca 529382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 279
Target Start/End: Original strand, 43250653 - 43250755
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 274  Q
    ||||||||||| ||| ||||||||| |  ||||||||||||| | || ||| || ||| |||||||||||||| |||  |||||||||||||||| | ||    
T  43250653 cataaacacttgtga-attgtttgggattacttatgaaaacagctta-tgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatag 43250750  T
Q  275 cttat 279  Q
    |||||    
T  43250751 cttat 43250755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 44151489 - 44151557
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| ||||||||||||| || |||||||| | ||||| || |||| ||||||||||||| ||||||    
T  44151489 cataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttata 44151557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 286
Target Start/End: Complemental strand, 9038228 - 9038119
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 274  Q
    ||||| ||||||||||| ||||  ||||||||||| |||||| | || ||| || ||||||| |||||||||||||| ||||| ||| |||||| || ||    
T  9038228 cataagcacttatgagaatgttcagaagaacttataaaaacagctta-tgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatag 9038131  T
Q  275 cttatcaaaaca 286  Q
     |||| ||||||    
T  9038130 tttatgaaaaca 9038119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 18350738 - 18350785
Alignment:
Q  254 ttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||||| || ||||||| |||||| ||||||||||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatac 18350785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 27378836 - 27378891
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||||||||| ||| |||||||||||||||| || || |||| ||||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaaca 27378891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 30456480 - 30456527
Alignment:
Q  253 tttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||||||| || |||| ||||| ||||||||||||||    
T  30456480 tttcataagctctccaagatagtttatgaaaaccacttataacttata 30456527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 33601417 - 33601479
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | |||||||||||| |||||||| |||| |||| ||||||| |||||||||||||    
T  33601417 ttcataagcttttttcagcttaaattcataagttctctaagatagcttat-aaaacaacttata 33601479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 48131454 - 48131415
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  48131454 cataagcacttatgagactgtttggaagaacttatgaaaa 48131415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 185
Target Start/End: Complemental strand, 2895385 - 2895343
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacactt 185  Q
    ||||||| |||||||||||| |||||||||| |||||||||||    
T  2895385 tttgaatcggttcatttgagattatctactagcataaacactt 2895343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 26935557 - 26935599
Alignment:
Q  223 tgaaatattcataagttgttttcagcttaatttcataagctct 265  Q
    ||||||||||||||| ||||||||||||| || ||||||||||    
T  26935557 tgaaatattcataagctgttttcagcttatttccataagctct 26935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 286
Target Start/End: Complemental strand, 28614530 - 28614440
Alignment:
Q  196 ttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||| |||||||||||||||||| ||    ||| |||| ||| | ||||||| ||||||||||||| ||||||| ||||||| | ||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaaca 28614440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 298
Target Start/End: Complemental strand, 32210304 - 32210262
Alignment:
Q  256 cataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||    
T  32210304 cataagctctcaaagatagcttataaaaacaacttataactta 32210262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 47130802 - 47130856
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||||| |||| ||||| ||| ||||||||| ||||||| ||||||||||||||    
T  47130802 gttttcaacttattttcacaagttctccaagatagcttatgaaaacaacttataa 47130856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 9423601 - 9423662
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||||||||||||||||||||| ||  | |||||||||| || ||||||| |||||| ||||    
T  9423601 ttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 12792579 - 12792624
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    ||||||||||||| ||||||||||||| ||||| ||||||| ||||    
T  12792579 tgttttcagcttattttcataagctcttcaagatagcttatgaaaa 12792624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 46104583 - 46104644
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||| ||||||| ||||||||||||| ||  | ||||||| ||||||||||||| ||||||    
T  46104583 tgtttccagcttattttcataagctcttcagcatagcttatgaaaacaacttatagcttata 46104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 5288247 - 5288195
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaactta 208  Q
    ||||||| | |||||||| ||||| ||||||||||| ||||||| ||||||||    
T  5288247 atttgagctaatctactagcataagcacttatgagactgtttgggagaactta 5288195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 11619131 - 11619222
Alignment:
Q  196 ttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||| |||| ||||||||||||| || ||| ||| |||||||| | |||||| |||||||||||||| |||||||   ||||||| |||||||    
T  11619131 ttgggagaatttatgaaaacaactta-tgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaa 11619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 15075094 - 15075162
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| |||||| |||||| || ||||||||||| |||  || |||| |||| |||||||||||||||    
T  15075094 cataagctgtttttagcttatttccataagctctctaaggtagtttatgaaaataacttataacttata 15075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 17944361 - 17944421
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||||||||||  | ||||||| | ||||| ||||||||||| ||| |||||    
T  17944361 ttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatatac 17944421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 21568459 - 21568559
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| ||||||| |||||||||||||||| | ||    ||| |||||||| | |||||| |||| || |||||| ||||||| | ||||||| ||||||    
T  21568459 tgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaaca 21568558  T
Q  287 a 287  Q
    |    
T  21568559 a 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 39968012 - 39967920
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||| | ||  | | | |||||||| |||||||| |||| |||||| || ||||  ||| ||||||| |||||||||||||    
T  39968012 agaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttata 39967920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 31517674 - 31517817
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||| ||||  ||||| ||||| ||||| ||||||| ||||||||| ||||||||  | ||| || |||||||| ||||||||||||| |||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactca-tgacatgttcataagctgttttcagcttatttt 31517772  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||||||| |||| || ||| |||||| ||||||    
T  31517773 cataagctctccaagacagattatgaagacagcttatagcttata 31517817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 7136932 - 7137068
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||||||||||||| |  |||||||||||| | | |  ||||| |||||||||||||||   | || ||| ||||||||||||| ||||||||||| |||    
T  7136932 atttgagtttatctcccgacataaacacttgttaaagagtttgaaagaacttatgaaaatcgctta-tgacatattcataagttattttcagcttatttt 7137030  T
Q  256 cataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||| ||||||||| ||||||| |||||| ||||||    
T  7137031 cataagttctccaagatagcttatgaaaacagcttata 7137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 10199342 - 10199469
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||||||||||||||| ||||| ||| | | ||||| |||||| ||||||| | | || ||| || |||||||||||||||||||||| |||    
T  10199342 atttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagctta-tgacatgttcataagttgttttcagcttatttt 10199440  T
Q  256 cataagctctccaagacagcttatcaaaa 284  Q
    ||||||||||| || | ||||||| ||||    
T  10199441 cataagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 34290302 - 34290228
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| |||||| |||||| |||||||    
T  34290302 atattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac 34290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 6292628 - 6292517
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||||| |||||| ||||| ||||||||||||| |||| || | |||||| | || ||| || |||||||| ||||||||||||| |||    
T  6292628 atttgagcttatctactgacataagcacttttgagattgtttgggagaattttt-aaaacagctta-tgacatgttcataagctgttttcagcttatttt 6292531  T
Q  256 cataagctctccaa 269  Q
    ||||||||||||||    
T  6292530 cataagctctccaa 6292517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 32515375 - 32515497
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||| ||| |||||| ||||| |||| ||| || |  |||||||||||||| ||||  |     
T  32515375 atttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgta-tgacatgtcaataagttgttttcaacttatatc 32515473  T
Q  256 cataagctctccaagacagcttat 279  Q
     |||||||||||| || |||||||    
T  32515474 tataagctctccatgatagcttat 32515497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 23902076 - 23902144
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| || ||||||||||| |||| ||||| | ||||||||||||| ||||||    
T  23902076 cataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttata 23902144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 25479644 - 25479581
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||| |||||||||||||||| |||||||||||||| | || ||||||| |||||||||||||    
T  25479644 ttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttata 25479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 28689461 - 28689531
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagct--tatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| ||||||||||| ||||||| ||||  ||| ||||||||||||| ||||||    
T  28689461 cataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttata 28689531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 279
Target Start/End: Original strand, 37593618 - 37593740
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||| ||||  ||||||||||| | ||| ||||||| | |||| ||||| ||||| || ||| || |||||||| ||||||||||||| |||    
T  37593618 atttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaactta-tgacatgttcataagctgttttcagcttatttt 37593716  T
Q  256 cataagctctccaagacagcttat 279  Q
    |||||||||| ||| | |||||||    
T  37593717 cataagctcttcaaaatagcttat 37593740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 38503472 - 38503535
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||| |  |||||||||||||    
T  38503472 ttcataagttgttttcagcttattttcataagttctccaagatagctaacaaaaacaacttata 38503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 49938853 - 49938739
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 285  Q
    ||||||||||||| |||||||||||||||| | || ||| ||| |||| ||| | |||||| |||| ||||||||| |||| || | ||||||| |||||    
T  49938853 tgagattgtttgggagaacttatgaaaacagctta-tgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaac 49938755  T
Q  286 aacttataacttatac 301  Q
    |||||||||| |||||    
T  49938754 aacttataacatatac 49938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 2777997 - 2777884
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| ||||| | ||||||||||||| |||| || |||  ||||||||||  |||||||||||| ||||||||| ||||||||  | ||||| ||||||    
T  2777997 tgagactgtttaggagaacttatgaaaccaactta-tgacgtattcataagccgttttcagcttattttcataagttctccaagttaacttattaaaaca 2777899  T
Q  287 acttataacttatac 301  Q
     |||||| |||||||    
T  2777898 gcttatagcttatac 2777884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 6231732 - 6231790
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtt 196  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||| || ||||||||||    
T  6231732 acctgtttgaattggtttatttgaggttatctactagcataaacatttgtgagattgtt 6231790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 285
Target Start/End: Complemental strand, 19390030 - 19389909
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttc-agcttaatttcataagc 262  Q
    ||||||||||||||||  | || ||| | ||||||| ||||| |||||||| ||| || ||| || |||||||||||||||  |||||| ||||| ||||    
T  19390030 ttatctactaacataagtagttgtgacactgtttgggagaacgtatgaaaaaaactta-tgatatgttcataagttgttttttagcttattttcacaagc 19389932  T
Q  263 tctccaagacagcttatcaaaac 285  Q
    ||||||||| ||||||| |||||    
T  19389931 tctccaagatagcttatgaaaac 19389909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 37842334 - 37842431
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    |||||||||||||||| | || ||| || ||||||||  |||||||||||| ||| ||||| ||| ||||| ||||||| ||||||||||||| |||||    
T  37842334 agaacttatgaaaacatc-taatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat 37842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 51695459 - 51695573
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| |||||||||||||||||  ||||||| ||    | | |||||||| | ||||||||||| ||||||||  ||||||||| ||||||| ||||||    
T  51695459 tgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaaca 51695558  T
Q  287 acttataacttatac 301  Q
     || |||||||||||    
T  51695559 tctgataacttatac 51695573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 300
Target Start/End: Original strand, 7218027 - 7218151
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 274  Q
    ||||||||||| |||||||||||||  || ||| ||||||| || || ||| |  |||| ||| |||||||| |||| ||||||||| |||||| || ||    
T  7218027 cataaacacttctgagattgtttgggggagcttgtgaaaacgactta-tgacacgttcacaagctgttttcaacttattttcataagttctccaggatag 7218125  T
Q  275 cttatcaaaacaacttataacttata 300  Q
     |||| ||||||||||||| ||||||    
T  7218126 gttatgaaaacaacttatagcttata 7218151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 26779934 - 26779995
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||| |||| ||||||||| ||| ||||| ||||||| |||||||||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttata 26779995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 27140539 - 27140478
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| || ||||||||||||| || ||||||| |||||| ||||||    
T  27140539 cataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 45975755 - 45975682
Alignment:
Q  228 tattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||| ||||||||||||| ||||||||  ||||||||| ||||||| |||||| ||| || |||||||    
T  45975755 tattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatac 45975682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 46252689 - 46252738
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttat 279  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||||||    
T  46252689 ttcataagttgttttcaggttattttcataagctctccaagatagcttat 46252738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 12564509 - 12564569
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||||||| || |||||| ||||||||| ||||||| |||||||| ||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctata 12564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 5887001 - 5887068
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    |||||||||||||||||||||| |||| |||| |||||||||  ||||||  ||||| ||||||||||    
T  5887001 ttcataagttgttttcagcttattttcgtaagttctccaagatggcttatagaaacagcttataactt 5887068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 35590899 - 35590970
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||| |||||||||||||||| || ||||||||||||| || ||||||| ||| | ||||||| |||||||    
T  35590899 ttcatcagttgttttcagcttatttccataagctctccatgatagcttatgaaatcgacttatagcttatac 35590970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 3233979 - 3234085
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| |||| || |||||||||||||||||| ||    | | |||||||||| |||||  |||| ||||||||| ||||||| | ||||||| ||||||    
T  3233979 tgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctacttattttcataagttctccaatatagcttataaaaaca 3234078  T
Q  287 acttata 293  Q
    |||||||    
T  3234079 acttata 3234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 7472365 - 7472311
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatggaaacagcttata 7472311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 14629973 - 14630043
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||||| || |||||  ||||||||| ||||||| |||| | |||||| ||||||    
T  14629973 ttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagcttata 14630043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 268
Target Start/End: Complemental strand, 15361103 - 15361065
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctcca 268  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  15361103 ttcataagttgttttcagcttattttcataagctctcca 15361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 24313610 - 24313672
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||||||||||||||| || |||||||| |||||||||||  ||||| || ||||||||||    
T  24313610 atttgagtttatctactagcacaaacacttgtgagattgtttaaaagaaattgtgaaaacaac 24313672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 43332538 - 43332476
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||| ||| ||||||||| ||||| ||||||| |||||| |||| |||||||||    
T  43332538 tgttttcagcttattttaataagctcttcaagatagcttatgaaaacagcttacaacttatac 43332476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 301
Target Start/End: Original strand, 4700079 - 4700144
Alignment:
Q  236 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||| |||||||||||||||| || || |||| ||||||  ||||| |||||||    
T  4700079 agttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttatac 4700144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 5592694 - 5592762
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagac-agcttatcaaaacaacttataacttata 300  Q
    |||||||||||| ||||||| |||||||||||||  ||||| ||||||| ||||||||||||| ||||||    
T  5592694 cataagttgtttccagcttattttcataagctct-taagactagcttatgaaaacaacttatagcttata 5592762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 300
Target Start/End: Original strand, 37241736 - 37241899
Alignment:
Q  137 aacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg-aaaacaacgtactgaaatattcata 235  Q
    |||||||||| ||||  | |||| || |||||||||  ||||| |||||  |||||||||| | ||| | |||| |||||||| || ||| |||||||||    
T  37241736 aacctgtttggattgacttatttaagcttatctactg-cataagcacttgcgagattgtttaggagagcatatgcaaaacaactta-tgatatattcata 37241833  T
Q  236 agttgttttc-agcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||| ||||| |||||| |||||||||||||| | || | ||||| |||||||||| || ||||||    
T  37241834 agtttttttccagcttattttcataagctctctaggatatcttatgaaaacaacttctagcttata 37241899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 4768762 - 4768877
Alignment:
Q  155 catttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatt 254  Q
    |||||||||||||| |||  ||||||||||| |||||  |||||| | |||||| ||||||| | ||| || || | ||||| |||||||||||||| ||    
T  4768762 catttgagtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttac-gacatgtccataacttgttttcagcttattt 4768860  T
Q  255 tcataagctctccaaga 271  Q
     |||||  |||||||||    
T  4768861 ccataaattctccaaga 4768877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 12593462 - 12593522
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||||| || ||| ||||||| |||||||| ||||||| |||||| |||||    
T  12593462 cataagttgttttcaggtttattccataagcgctccaagatagcttatgaaaacagcttat 12593522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 292
Target Start/End: Original strand, 47598430 - 47598490
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||||||||  |  ||||||||||||| || ||||||| ||||||||||||    
T  47598430 cataagttgttttcagcttgttgccataagctctccaggatagcttatgaaaacaacttat 47598490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 219558 - 219621
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||||| | || |||||||||| || ||||||||||  ||||||||||||    
T  219558 ttcataagctgttttcagctcatttccataagctcttcaggacagcttatgtaaacaacttata 219621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 1510317 - 1510388
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| | |||||| |||| |||| |||| ||||||| | ||||||| ||||||||||||||| |||||    
T  1510317 ttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatac 1510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 4548780 - 4548717
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||| |||||| ||||  ||||||||||||| ||||||| |||||| ||||| ||||    
T  4548780 taagttgtttttagcttattttctgaagctctccaagatagcttatgaaaacagcttatgactt 4548717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 10744364 - 10744301
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| |||||||| |||| ||| ||||| |||| |||||||||||| |||||| ||||||    
T  10744364 ttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttata 10744301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 17269365 - 17269251
Alignment:
Q  177 taaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagct 276  Q
    ||||||||| ||||||||||||| ||  |||||||||| | | || ||| || ||||| ||||||||| | |||| |  | ||||||||||| || ||||    
T  17269365 taaacacttgtgagattgtttggtagtgcttatgaaaatacctta-tgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagct 17269267  T
Q  277 tatcaaaacaacttat 292  Q
    ||| ||||||||||||    
T  17269266 tatgaaaacaacttat 17269251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 139 - 218
Target Start/End: Complemental strand, 17420355 - 17420277
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||| |||||||| |||||||||| | || || ||||||||||| | ||| ||||| ||||| ||||||||||||||    
T  17420355 cctgtttcaattggtttatttgagttttt-tattagcataaacacttgttagactgttttgaagagcttatgaaaacaac 17420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 18327067 - 18327142
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||| ||||| | ||||||| |||||||||  ||||| ||||| ||| | | ||||||||||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaac 18327142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 24915058 - 24915121
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | |||||| |||| ||||| ||| ||||||||||||||||| |||||| ||||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttata 24915121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 27820344 - 27820415
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| | ||||||||||| ||||||||  ||||||||| ||||||| |||||| | |||| |||||||    
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatac 27820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 28077069 - 28077132
Alignment:
Q  223 tgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||| |||||||||||||||||||||| ||  |||||||||| || | ||||||| ||||||    
T  28077069 tgaaatgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaaca 28077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 251
Target Start/End: Original strand, 40413956 - 40414050
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctta 251  Q
    ||||||||||||| ||  |||| ||||||| | ||||||||||| |||||||| |||| |||| |  |||||| | ||||||||||||||| ||||    
T  40413956 atttgagtttatcaaccgacatcaacacttgtaagattgtttgggagaacttacgaaagcaac-tgatgaaatgtccataagttgttttcaactta 40414050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 42757130 - 42757204
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctt 250  Q
    ||||| ||||| ||| | |||||||||||||||| ||||||||| || | | ||||||||||| ||||||||||||    
T  42757130 cataaccacttgtgacactgtttggaagaacttacgaaaacaactta-ttacatattcataagctgttttcagctt 42757204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 51688767 - 51688705
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||| ||||| ||||||||||||||||||||| |||||| || ||||||  |||||||||||||    
T  51688767 ttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttata 51688705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 289
Target Start/End: Complemental strand, 3924713 - 3924628
Alignment:
Q  203 aacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaact 289  Q
    |||||||||||||||  || |||||| || ||||||||||||| ||||| || ||||| |||| || || ||||||| |||||||||    
T  3924713 aacttatgaaaacaattta-tgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaact 3924628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 4757474 - 4757412
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||| ||||||| | |||||||||||| |||||   ||||| ||||||||||||||||||    
T  4757474 atttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaac 4757412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 5421955 - 5421997
Alignment:
Q  258 taagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||| |||| ||||||||||||||||||||| ||||||    
T  5421955 taagctctctaagatagcttatcaaaacaacttatagcttata 5421997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 8810118 - 8810080
Alignment:
Q  176 ataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  8810118 ataatcacttctgagattgtttggaagaacttatgaaaa 8810080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 15581382 - 15581328
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||| |||||| ||||| ||||||||||||||||| || ||| |||||||    
T  15581382 ttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaac 15581328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 28348783 - 28348729
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||||||| ||||||||||| |||||||||||| ||||  ||| |||||||||    
T  28348783 ttatctactagcataaacacttgtgagattgtttgaaagatattacgaaaacaac 28348729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 29793836 - 29793774
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| |||| |||||||||||||| |||| ||||||| ||  ||||||||| |||||||    
T  29793836 tgttttcaacttagtttcataagctctcgaagatagcttatgaactcaacttatagcttatac 29793774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 35017637 - 35017583
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||| |||||| |||| || ||||||||||||| |||||||||| ||||||    
T  35017637 cataagttattttcaacttatttccataagctctccaggacagcttatgaaaaca 35017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 298
Target Start/End: Complemental strand, 35179200 - 35179134
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    |||||| ||||||||||||| ||||||||| ||||||  | | ||||| |||||| |||||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttataactta 35179134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 38170647 - 38170732
Alignment:
Q  179 aacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctct 265  Q
    ||||||| ||||| || |||| ||| |||||||||||| | || ||| || |||||||||||||||||||||  |||| ||||||||    
T  38170647 aacacttgtgagactgcttgggagagcttatgaaaacagctta-tgacatgttcataagttgttttcagcttgttttcctaagctct 38170732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 4033932 - 4034009
Alignment:
Q  137 aacctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    |||||||||| ||||  ||||||||  || ||||||  ||||||||||| ||||||||||||  ||| ||||||||||    
T  4033932 aacctgtttgcattgactcatttgaacttgtctactggcataaacacttgtgagattgtttgagagagcttatgaaaa 4034009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 8016320 - 8016279
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    ||||||| |||||||||||||| |||| ||||||||||||||    
T  8016320 ttcataacttgttttcagcttattttcctaagctctccaaga 8016279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 16322910 - 16322845
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||||| |||||| || |||||||||| ||| | ||| ||| |||||| ||||||||||    
T  16322910 cataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataactt 16322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 27963379 - 27963444
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||||| |||||| ||  ||||||||||||  | ||||||| ||||||||||| |||||    
T  27963379 cataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaacttagaactt 27963444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 28482237 - 28482310
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||  | |||| |||||| |||| |||||||||||||| | ||||| |||||| |||||| ||||||    
T  28482237 atattcataaactatttttagcttattttcgtaagctctccaagataacttataaaaacagcttatagcttata 28482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 263
Target Start/End: Original strand, 33723298 - 33723422
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataag 237  Q
    ||||||||| ||||  | ||||||  |||||||||| ||||||||||| ||||| || |||| | |||||||| ||||| | |  ||| || ||||| ||    
T  33723298 acctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagc-tcatgacatgttcatgag 33723396  T
Q  238 ttgttttcagcttaatttcataagct 263  Q
     ||||||||||||| || ||||||||    
T  33723397 atgttttcagcttatttccataagct 33723422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 218
Target Start/End: Complemental strand, 36070332 - 36070255
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||| ||||||| ||||||  |||||| ||  ||||| ||||| ||||| ||||| | ||||||||||||||||||    
T  36070332 tgtttggattggtttatttgatattatcttctggcataagcacttgtgagactgtttaggagaacttatgaaaacaac 36070255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Original strand, 38116089 - 38116146
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||||||||| ||||||| ||||||||| ||||||||| | ||||  |||||||||||    
T  38116089 taagttgtttccagcttactttcataagttctccaagataacttaagaaaacaactta 38116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 38578638 - 38578570
Alignment:
Q  182 acttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagctta 251  Q
    |||| ||||| ||||||||  |||||||||||||||| || | | |||||||||||||||||| ||||||    
T  38578638 acttgtgagactgtttggactaacttatgaaaacaactta-taacatattcataagttgttttgagctta 38578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 39347976 - 39348037
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| || |||||||| | || || || |||| |||||||||||||    
T  39347976 cataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttata 39348037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 268
Target Start/End: Complemental strand, 47877171 - 47877134
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctcca 268  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  47877171 tcataagttgttttcagcttattttcataagctttcca 47877134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 4622154 - 4622086
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| |||||| |||||| ||||| ||||||||||||| ||| |||  ||||| |||||| ||||||    
T  4622154 cataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttata 4622086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 12564883 - 12564951
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| ||||||||||||| || | ||||| ||  |||| ||||||| ||||||||||||| ||||||    
T  12564883 cataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagcttata 12564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 27887127 - 27887195
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||| ||||||| |||||| ||| ||| |||||||| || || |||| ||||||||||||| ||||||    
T  27887127 cataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttata 27887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 30371209 - 30371141
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| ||  ||| ||||||||| |   ||||| ||||||||||||| ||||||    
T  30371209 cataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttata 30371141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 293
Target Start/End: Complemental strand, 28615470 - 28615334
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg-ttttcagcttaatt 254  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| | || ||| || ||||||||||| ||||  ||||| ||    
T  28615470 atttaagtttatctactagcataaacacttgtgagattgtttgg-agaacttatgaaaacagc-taatgacattttcataagttgttttttggcttattt 28615373  T
Q  255 tcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||| ||  | ||||||| |||||||||||||    
T  28615372 tcataagctcttcattatagcttatgaaaacaacttata 28615334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 300
Target Start/End: Complemental strand, 2996691 - 2996566
Alignment:
Q  174 acataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagaca 273  Q
    |||||| ||||| ||||| ||||||  ||| |||||||||||||| || ||| || | |||||| | |||||| |||| ||||||| ||||||||||| |    
T  2996691 acataagcacttttgagactgtttgagagagcttatgaaaacaactta-tgacatgtccataagcttttttcaacttattttcatacgctctccaagata 2996593  T
Q  274 gcttatcaaaacaacttataacttata 300  Q
    |||||| ||||||||||||||||||||    
T  2996592 gcttatgaaaacaacttataacttata 2996566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 297
Target Start/End: Original strand, 52315161 - 52315271
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||||||||||||||| |||||||| ||    | ||||||||||||| |||||||||| ||||||||| | ||||| | |||||||  |||||    
T  52315161 tgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttcagcttattttcataagttttccaaaatagcttatggaaaca 52315260  T
Q  287 acttataactt 297  Q
    |||||||||||    
T  52315261 acttataactt 52315271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 17884131 - 17884060
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||||| | ||||||||||||||||| | ||||||| ||||||||| |||||||||||    
T  17884131 ttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatac 17884060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 18628487 - 18628620
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||||| |||||||||||| ||||| ||||||| ||| |||||||||||||| || ||          ||||||||||||||||| ||     
T  18628487 atttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaactta-tg----------aagttgttttcagcttatttc 18628575  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||| | ||||| ||||||  ||||||||||||    
T  18628576 cataagctctccaagataacttatgaaaacagtttataacttata 18628620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 290
Target Start/End: Original strand, 4798511 - 4798633
Alignment:
Q  167 tctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 266  Q
    |||| ||||| |||||||| ||||| |||| |||||| |||||| ||||  | | |||| || | |||||| |||||| |||||| || |||||||||||    
T  4798511 tctattaacaaaaacacttgtgagactgttaggaagagcttatggaaacggctt-ctgacatgtacataagctgttttgagcttatttgcataagctctc 4798609  T
Q  267 caagacagcttatcaaaacaactt 290  Q
    ||||| ||||||| ||||||||||    
T  4798610 caagatagcttatgaaaacaactt 4798633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 16494816 - 16494882
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||| |||| ||| | ||||||||||||| ||||||| ||||||||||||| ||||||    
T  16494816 taagttgttttcaacttagttttacaagctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 21731573 - 21731726
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 238  Q
    |||||||| ||||||| |||||||  |||||||| ||||||    || ||||||||||||| |||||||||||||||| | ||    ||| |||||||      
T  21731573 cctgtttggattggtttatttgagcatatctactgacataagtt-ttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaac 21731671  T
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    | |||||| |||| ||||||||  ||||||| | ||||||| |||||||||||||    
T  21731672 ttttttcaacttactttcataaattctccaatatagcttataaaaacaacttata 21731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 42641573 - 42641714
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtttt-cagctta-at 253  Q
    ||||||| |||||||||  | | ||||||| ||| | |||||  ||||||||||||||||| | || ||| || |||| ||| |||||| ||||||| ||    
T  42641573 atttgagcttatctactggcgtgaacacttgtgatactgttttcaagaacttatgaaaacacctta-tgacatgttcacaagctgttttgcagcttatat 42641671  T
Q  254 ttcataagctctccaagacagcttatcaaaacaacttataact 296  Q
    ||||||||||| |||| | ||||||| ||||||||||||||||    
T  42641672 ttcataagctcaccaaaatagcttatgaaaacaacttataact 42641714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 51555705 - 51555759
Alignment:
Q  157 tttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||| |||||||    
T  51555705 tttgagtttatctactcacataagcacttatgagattgtttagaagagcttatga 51555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 53673667 - 53673721
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||| ||||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaaaca 53673721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 42866220 - 42866061
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 239  Q
    ||||||| ||||| |  ||||||||||| ||||  ||||||||| | ||||| | ||||| |||||||||| |||||   || ||| || | |||||| |    
T  42866220 ctgtttggattggcttgtttgagtttatttactggcataaacacctttgagactctttgggagaacttatgtaaacattcta-tgatatgtccataagat 42866122  T
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    | ||| |||||| || ||||||||||| | || ||||||| ||||||||||||| ||||||    
T  42866121 gcttttagcttacttccataagctctcaaggatagcttatgaaaacaacttatagcttata 42866061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 7694017 - 7694088
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||||||| || ||||| ||||||| || | ||||| |||||| |||||| |||||||    
T  7694017 ttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatac 7694088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 17822872 - 17822935
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | |||| |||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  17822872 ttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttata 17822935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 32831438 - 32831559
Alignment:
Q  142 gtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgt 241  Q
    ||||| ||||| ||||||||| ||||||||| |||||| ||||| ||| |   ||||| |||||  ||||||||||| || | | ||||||||||| | |    
T  32831438 gtttggattggctcatttgagcttatctactgacataagcacttttgataccttttgggagaacagatgaaaacaactta-taacatattcataagatat 32831536  T
Q  242 tttcagcttaatttcataagctct 265  Q
    ||||||||| ||||||||||||||    
T  32831537 tttcagctt-atttcataagctct 32831559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 36722687 - 36722746
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||| |||||| ||||||||||||| || || | ||||||||||||||||||||||||||    
T  36722687 ttttaagcttattttcataagctcttcaggataacttatcaaaacaacttataacttata 36722746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 49202708 - 49202637
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||||||| |||| |||||| || | ||||||| ||||||  ||||||||||||| |||||||    
T  49202708 ttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagcttatac 49202637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 10192342 - 10192277
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||| |||| ||||||| |||||||| || ||||| | ||||||||||||||||||||    
T  10192342 taagttgttttcaacttattttcata-gctctccaggatagcttttgaaaacaacttataacttata 10192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 297
Target Start/End: Original strand, 11158373 - 11158431
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||||| || || |||||||| |||| ||||||| |||||||||||||||||    
T  11158373 tgttttcagcttatttccacaagctctctaagatagcttatgaaaacaacttataactt 11158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 292
Target Start/End: Complemental strand, 29263433 - 29263371
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||||||||||| || || ||||||| || || ||||||| ||||||||||||    
T  29263433 ttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttat 29263371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 33534103 - 33534212
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||| | ||||||  |||| ||||| | ||||  ||| |||||||||||||  |  ||| |||| |||||||||||||||||||| |||    
T  33534103 atttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaaattg-tgacatatccataagttgttttcagcttatttt 33534201  T
Q  256 cataagctctc 266  Q
    |||||||||||    
T  33534202 cataagctctc 33534212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 40532601 - 40532655
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||||||| ||||    
T  40532601 ttcataagttgttttcatcttattttcgtaggctctccaagacagcttatgaaaa 40532655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 47146025 - 47145971
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||| |||| ||||    
T  47146025 ttcataagttgttttcaccttattttcataagctcttcaagacagtttatgaaaa 47145971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 1017164 - 1017111
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttat 209  Q
    ||||||| | ||||||| |||||||||||| ||||| |||||||||||||||||    
T  1017164 atttgagctaatctactgacataaacacttgtgagactgtttggaagaacttat 1017111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 1137827 - 1137739
Alignment:
Q  177 taaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 266  Q
    ||||||||| ||| | ||||| | |||||||||||||||| | || ||| || |||||||||||||||||| ||| || |||||||||||    
T  1137827 taaacacttgtgacactgtttaggagaacttatgaaaacatctta-tgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 23819194 - 23819082
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| |||||||||||  ||| ||||||| | || ||| || | ||||||||||||||| |||| ||  ||||||||| ||||| ||||||| ||||||    
T  23819194 tgagactgtttggaagagtttaagaaaacagctta-tgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaaca 23819096  T
Q  287 acttataacttata 300  Q
      ||||||||||||    
T  23819095 tgttataacttata 23819082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 30668384 - 30668433
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||||||||    
T  30668384 ttttcagcttaatttcataaactatccaagatagcttataaaaacaactt 30668433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 37575870 - 37575962
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagct 249  Q
    |||||||||||||| ||| ||||||| ||  ||| ||||||||  |||||||||||||| ||| || | | ||| |||||||||||||||||||    
T  37575870 atttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataactta-taacatactcataagttgttttcagct 37575962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 47800676 - 47800623
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||| ||||||||||||| ||||| ||||||| |||||| ||||||    
T  47800676 gttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 55084488 - 55084549
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||||||| || |||||||||| |||||||||||||| |||| |||| || |||||||||||    
T  55084488 ttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaacaactta 55084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 1404472 - 1404416
Alignment:
Q  238 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    |||||||||||||| |||||||||||||||| || || |||| ||||| ||||||||    
T  1404472 ttgttttcagcttactttcataagctctccatgatagtttatgaaaaccacttataa 1404416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 27970095 - 27970051
Alignment:
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||    
T  27970095 cataagctctccatgacagcttatgaaaacaagttataacttata 27970051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 49219200 - 49219132
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| || ||||| ||||  |||| || |||| ||||||||||||| ||||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttata 49219132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 301
Target Start/End: Complemental strand, 56480388 - 56480340
Alignment:
Q  253 tttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||||||||| || |||| |||||| ||||||||||||||    
T  56480388 tttcataagctctccaagatagtttatgaaaacagcttataacttatac 56480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 299
Target Start/End: Complemental strand, 11802595 - 11802528
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    |||||| ||||||||||||| | ||||||||||||||  | ||||||| |||||||||| || |||||    
T  11802595 cataagctgttttcagcttattctcataagctctccataatagcttatgaaaacaacttgtagcttat 11802528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 22471401 - 22471350
Alignment:
Q  165 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 22471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 25487491 - 25487550
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaac 215  Q
    ||||||||||||||| || ||||| ||||| | ||||||||||||||| |||||| ||||    
T  25487491 atttgagtttatctattagcataagcacttgtaagattgtttggaagagcttatgcaaac 25487550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 8328040 - 8328114
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaa 217  Q
    ||||||||| |  ||||||| ||||||| |  ||||| ||||||||||| ||||||||| | |||||||||||||    
T  8328040 tttgaattgatgtatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaa 8328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 17975380 - 17975438
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    ||||||||||| |||||| || || ||||||||||||| ||||||| |||||| |||||    
T  17975380 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 17975438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 22772417 - 22772459
Alignment:
Q  163 tttatctactaacataaacacttatgagattgtttggaagaac 205  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||    
T  22772417 tttatctactagcataaacacttttgagattgtttgggagaac 22772459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 24087472 - 24087410
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||||||||||||||||||||||||   | | ||||| | |||||||||| |||||||    
T  24087472 atttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaac 24087410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 24091599 - 24091537
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||||||||||||||||||||||||   | | ||||| | |||||||||| |||||||    
T  24091599 atttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaac 24091537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 25332873 - 25332807
Alignment:
Q  195 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 261  Q
    ||||| |||||||  ||||||||| ||  | | |||||||||||||||||||||||| |||||||||    
T  25332873 tttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataag 25332807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 293
Target Start/End: Complemental strand, 27721830 - 27721717
Alignment:
Q  179 aacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctta 278  Q
    ||||||| |||||||||||   ||| ||||| ||||| || || ||| |||| |||||| ||||||||||||| ||||  |||||||||| || | ||||    
T  27721830 aacacttgtgagattgtttaagagagcttataaaaactactta-tgacatatccataagctgttttcagcttattttcgcaagctctccaggataactta 27721732  T
Q  279 tcaaaacaacttata 293  Q
    | |||||| ||||||    
T  27721731 tgaaaacagcttata 27721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 30207582 - 30207648
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||| ||||||||||||| || ||||| ||||| |||  ||||||| ||||||||||||| ||||||    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttata 30207648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 39178209 - 39178259
Alignment:
Q  165 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaac 215  Q
    |||||||| |||||||||||| ||| | ||||||| |||||||||||||||    
T  39178209 tatctactgacataaacacttttgacactgtttgggagaacttatgaaaac 39178259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 43824346 - 43824276
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||||| || |||||||| |||| || | ||||  |||| | |||||||||||||    
T  43824346 ttcataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttata 43824276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 291
Target Start/End: Original strand, 46019548 - 46019697
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg 240  Q
    ||||||||||| || ||||||| |||| |||||  ||||| |||| ||||||||| || ||||  |||| || | ||| || ||| || || ||||||||    
T  46019548 tgtttgaattgatttatttgagcttatgtactagtataaaaacttgtgagattgtctgaaagagtttataaacagaactta-tgacatgttgataagttg 46019646  T
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||||| ||||  |||||||||||| |  || | ||||| |||||||||||    
T  46019647 ttttcaacttatattcataagctcttcgggataacttatgaaaacaactta 46019697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 46110291 - 46110230
Alignment:
Q  204 acttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctc 266  Q
    ||||||||||||||| || ||| ||| ||||||||||||||||||||| ||  ||||||||||    
T  46110291 acttatgaaaacaactta-tgatatactcataagttgttttcagcttatttctataagctctc 46110230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 46415725 - 46415866
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgttt-ggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatt 254  Q
    ||||||||| ||| ||| |||||   |||||||||| ||||| || |||  ||||| ||||||| || ||| || | |||||||||||||||||| | ||    
T  46415725 atttgagttcatccactgacataggaacttatgagactgttttgggagagtttatgcaaacaaccta-tgacatgtccataagttgttttcagctaattt 46415823  T
Q  255 tcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    |  ||||||||| | || ||||||| |||| ||||||||||||    
T  46415824 tactaagctctcgaggatagcttatgaaaagaacttataactt 46415866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 50799986 - 50800106
Alignment:
Q  178 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 277  Q
    |||||||| ||||||||||||| |||||| ||| ||||||| || ||| || |  ||||| |||||||||||| |||||  ||| |||||| || |||||    
T  50799986 aaacacttgtgagattgtttgggagaactaatgtaaacaactta-tgacatgtctataagctgttttcagctt-atttccaaagttctccatgatagctt 50800083  T
Q  278 atcaaaacaacttataacttata 300  Q
    |  |||||| |||||| ||||||    
T  50800084 aagaaaacagcttatagcttata 50800106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 271
Target Start/End: Complemental strand, 53792631 - 53792593
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaaga 271  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaaga 53792593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 2592320 - 2592365
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttat 279  Q
    |||||||||||||||||| || |||||||||||||| | |||||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatagcttat 2592365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 5131259 - 5131304
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagctt 277  Q
    |||||||||||||||||||| || ||||||||||||| || |||||    
T  5131259 cataagttgttttcagcttatttccataagctctccaggatagctt 5131304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 14011293 - 14011248
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttat 279  Q
    |||| ||||||||||||| || |||||||||||||||| |||||||    
T  14011293 taagctgttttcagcttatttccataagctctccaagatagcttat 14011248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 30377433 - 30377470
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagctta 278  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  30377433 ttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 34398694 - 34398755
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||| ||||| || ||||||||||||| ||  |||||| |||||| ||||||    
T  34398694 cataagttgttttcggcttacttccataagctctccatgatggcttatgaaaacagcttata 34398755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 35406016 - 35405947
Alignment:
Q  224 gaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||| || | ||| | |||||||| ||||    
T  35406016 gaaatgttcataagctgttttcagcttacttccataagctctccaggataacttttgaaaacaacctata 35405947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 44638187 - 44638250
Alignment:
Q  238 ttgttttcagcttaatttcataagctctc--caagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||| ||||||||||||||  ||||| |||||||  |||||||||||| ||||||    
T  44638187 ttgttttcagctta-tttcataagctctctccaagatagcttatacaaacaacttatagcttata 44638250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 265
Target Start/End: Original strand, 51560207 - 51560331
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 239  Q
    |||||| ||||| || || |||| |||||||||  ||||| ||||||||||| | ||||| ||| |||||||||||| | || | | || ||||||| ||    
T  51560207 ctgtttcaattgctttatatgagcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacacctta-tcacatgttcataactt 51560305  T
Q  240 gttttcagcttaatttcataagctct 265  Q
    ||||| |||||| | |||||| ||||    
T  51560306 gtttttagcttattctcataatctct 51560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 3549479 - 3549547
Alignment:
Q  146 gaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    ||||||| | |||| |||||||||| |  ||||| ||||||||||| ||||||  ||||||||||||||    
T  3549479 gaattggcttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 8469009 - 8468941
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||| ||| |||||||||||||| |  | | ||||| ||||||||| ||| ||||||    
T  8469009 cataagttgttttcagattattttcataagctctctagaataacttatgaaaacaactaatagcttata 8468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 24169326 - 24169270
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||| | |||||| |||| ||||||||||||||||||| ||||| | ||||||    
T  24169326 ttcataagattttttcaacttattttcataagctctccaagatagcttgtgaaaaca 24169270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 24718790 - 24718746
Alignment:
Q  167 tctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    |||||| |||||||||||||||||| |||||||  ||||||||||    
T  24718790 tctactgacataaacacttatgagactgtttggtcgaacttatga 24718746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 28300278 - 28300377
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||| ||||||||||| | || ||| || ||| ||||||||||||| |||| ||||||||||||| ||||| ||| ||| |||| |  ||||| ||||||    
T  28300278 agaatttatgaaaacagccta-tgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttata 28300376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 42641416 - 42641492
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    ||||||||||||||| ||||| | ||| |||||  ||||| ||||| ||| | ||||||  ||||||||||||||||    
T  42641416 ctgtttgaattggtttatttgtgcttaactactgtcataatcacttttgaaactgtttgcgagaacttatgaaaaca 42641492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 44797922 - 44797886
Alignment:
Q  257 ataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  44797922 ataagctctccaatacagcttataaaaacaacttata 44797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 49803271 - 49803215
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| || ||||||||||||| | || |||| ||||||||| ||||||||||||||    
T  49803271 ttcattagctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaaca 49803215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 52259683 - 52259631
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||| |||| ||||||||||||||| ||| ||||||| |||||| ||||||    
T  52259683 ttttcaacttattttcataagctctcccagatagcttataaaaacagcttata 52259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 287
Target Start/End: Complemental strand, 10031861 - 10031738
Alignment:
Q  163 tttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagc 262  Q
    |||||||||| |||||| ||||| ||||| |||||| |||| | ||||||| |||| ||| || |||| ||||||||||||||| |||| || | |||||    
T  10031861 tttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaacttac-gacatatccataagttgttttcatcttatttccttaagc 10031763  T
Q  263 tctccaagacagcttatcaaaacaa 287  Q
    ||||||||||||||||| |||||||    
T  10031762 tctccaagacagcttataaaaacaa 10031738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 20368153 - 20368258
Alignment:
Q  195 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||| |||||||||||||||||| || ||| || |||||||| |  ||||| |||| ||||||||| ||||||||| ||||||| ||||||||||||||    
T  20368153 tttgggagaacttatgaaaacaactta-tgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataa 20368251  T
Q  295 cttatac 301  Q
    || ||||    
T  20368252 ctcatac 20368258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 156 - 297
Target Start/End: Original strand, 35070401 - 35070541
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||||||||||||||| ||||| || || ||||||| |||||  ||||||||| | ||  | || || |||||| |||||||| |||| |||    
T  35070401 atttgagcttatctactaacataagcacttgtgggactgtttgggagaacaaatgaaaacagcttaaggcaagat-cataagctgttttcaacttatttt 35070499  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||| || | ||||||  |||||| ||||||||||    
T  35070500 cataagctctcaaacatagcttacaaaaacagcttataactt 35070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 31812036 - 31812091
Alignment:
Q  246 agcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  31812036 agcttattttcataagctctccaagatagcttatgaaaacaacttatatcttatac 31812091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 300
Target Start/End: Complemental strand, 4006811 - 4006707
Alignment:
Q  195 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||||||| ||| |||||||||| ||| || || | |||||||| ||||||||||| |||||||| |||||   || ||||||| |||||||||||||     
T  4006811 tttggaagagcttgtgaaaacaacttac-gatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatag 4006713  T
Q  295 cttata 300  Q
    ||||||    
T  4006712 cttata 4006707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 300
Target Start/End: Original strand, 34910374 - 34910486
Alignment:
Q  188 gagattgtttggaagaacttatgaaaacaacgtactgaaata-ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||||||||||||  |||||||||| | || ||| ||  ||||| |||||||||| ||||| ||||||||| ||||||| |||| |||| | ||||    
T  34910374 gagattgtttggaagaaactatgaaaacagctta-tgacattgttcatgagttgttttccgcttactttcataagttctccaaaacagattatgagaaca 34910472  T
Q  287 acttataacttata 300  Q
    ||||||| ||||||    
T  34910473 acttatagcttata 34910486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 2160946 - 2161014
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||| |||| || ||||| || ||||||||||||||  ||||||||||||| ||||||    
T  2160946 cataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatatcttata 2161014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 27857500 - 27857432
Alignment:
Q  150 tggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||| ||||||||||||||||| ||||| |||||| ||| | ||||||| ||| ||||||||||||||    
T  27857500 tggtttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaac 27857432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 198 - 298
Target Start/End: Complemental strand, 31624184 - 31624085
Alignment:
Q  198 ggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||||||||||||| | || ||| || |||||||| |||||||| |||| ||||||||  ||||||||| ||| ||| |||||| |||||| |||    
T  31624184 ggaagaacttatgaaaacagctta-tgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctt 31624086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 6647450 - 6647380
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||| |||||||| |||| |||||||||||||| |||| ||||||| ||||||  ||||||| ||||    
T  6647450 ttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataacctata 6647380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 9093572 - 9093634
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||||| |||| |||| |||| |||||||||||| |||||| |||||| |||||||    
T  9093572 tgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatac 9093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 26559173 - 26559235
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||||| |||||  ||||| || || ||||| ||||||||||||||||||||||||||    
T  26559173 atttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaac 26559235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 31672445 - 31672491
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacact 184  Q
    |||| |||||||||||| ||||||||||||||||| |||||||||||    
T  31672445 acctatttgaattggtttatttgagtttatctactcacataaacact 31672491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 34430469 - 34430539
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||| | ||||||||||| ||||||||  ||||||||| ||||||| |||||| |||||||| |||||    
T  34430469 tcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatac 34430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 261
Target Start/End: Complemental strand, 769254 - 769170
Alignment:
Q  176 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 261  Q
    |||||||||| ||||| |||||||| ||||||||||||||| | || ||| || |||||||| |||||||| |||| |||| ||||    
T  769254 ataaacacttgtgagactgtttggatgaacttatgaaaacatctta-tgacatgttcataagctgttttcaacttactttcttaag 769170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 291
Target Start/End: Complemental strand, 4420706 - 4420645
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||||||  |||| ||||||    
T  4420706 ttcataagctgttttcagcttatttccataagctctccaagatagcttaggaaaataactta 4420645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 33787761 - 33787822
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||| || || |||||||||||||||| | ||||| |||||| |||||||||||||    
T  33787761 tgttttcagcctatttccataagctctccaagataacttatgaaaacagcttataacttata 33787822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 5564144 - 5564200
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 295  Q
    ||||||||||||| || ||||| |||| ||||||||||||| ||||||||| |||||    
T  5564144 tgttttcagcttatttgcataaactcttcaagacagcttatgaaaacaactgataac 5564200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 31421038 - 31420975
Alignment:
Q  199 gaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    ||||| |||||||||||||| || |   ||||||||||||||||||||||||| |||||||||||    
T  31421038 gaagagcttatgaaaacaactta-tcgcatattcataagttgttttcagcttattttcataagct 31420975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 211
Target Start/End: Original strand, 34429639 - 34429703
Alignment:
Q  147 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    |||||||| ||||||| |||||||||| |||||||||||  || ||||||||||| | |||||||    
T  34429639 aattggtttatttgagcttatctactagcataaacacttgagatattgtttggaaaagcttatga 34429703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 415367 - 415296
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||  |||||||||||| ||| |||||| ||||||  | ||||||| ||||||||||||| |||||||    
T  415367 ttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatac 415296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 30863363 - 30863269
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaag 270  Q
    ||||||||||| | ||| | ||||| ||| |||||||||||||| || ||| || | |||||||||||||||||||| ||  ||||||||| ||||    
T  30863363 cataaacacttgttagactctttggtagagcttatgaaaacaactta-tgacatgtacataagttgttttcagcttacttctataagctcttcaag 30863269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 835265 - 835311
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaac 285  Q
    ||||||||||||| ||||||||| ||||||||| ||||||| |||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaac 835311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 7945820 - 7945929
Alignment:
Q  158 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttca 257  Q
    ||||| ||||||||| |||||| ||||  ||| || |||||| |||| ||||||||||||| || ||  || || || ||||||||| |||||| || ||    
T  7945820 ttgagcttatctactgacataagcactcgtgacatggtttgggagaaattatgaaaacaactta-tggcatgtttattagttgttttaagcttatttcca 7945918  T
Q  258 taagctctcca 268  Q
    |||||||||||    
T  7945919 taagctctcca 7945929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 29296304 - 29296371
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| ||||||||||| ||||||||||| |  |||| ||||||  ||||||||||||| |||||||    
T  29296304 cataagttattttcagcttattttcataagctat--aagagagcttaagaaaacaacttataccttatac 29296371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 31774513 - 31774455
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    ||||||||||||||||   ||||| ||||||||||| ||||||||||| || |||||||    
T  31774513 atttgagtttatctaccggcataagcacttatgagactgtttggaagagctcatgaaaa 31774455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 32386578 - 32386640
Alignment:
Q  238 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||| |||||||||||||||| || | || || |||||||| |||| ||||||    
T  32386578 ttgttttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttata 32386640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 292
Target Start/End: Complemental strand, 34403977 - 34403856
Alignment:
Q  170 actaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 269  Q
    |||| ||||||||||| | ||| ||||| | |||| ||| ||||||||| || ||| || |||||||| |||||||| |||| || ||||||||||  |     
T  34403977 actagcataaacacttgttagactgtttaggagaagttaagaaaacaactta-tgacatgttcataaggtgttttcaccttatttccataagctctttag 34403879  T
Q  270 gacagcttatcaaaacaacttat 292  Q
     ||||||||| |||||| |||||    
T  34403878 tacagcttatgaaaacatcttat 34403856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 837234 - 837291
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||| ||||||||| ||||||||| |||| || ||||| ||||||| ||||    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagctta 837291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 1498035 - 1497978
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataact 296  Q
    |||||||| |||| ||||||||||||||||||| || |||| |||||  |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaacttcttataact 1497978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 7351605 - 7351646
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgttt 197  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    
T  7351605 atttgagtttatctactgacataagcacttgtgagattgttt 7351646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 9027639 - 9027606
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctct 265  Q
    |||||||||||||||||||| |||||||||||||    
T  9027639 cataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 26694931 - 26694870
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||| ||||||||| ||| ||||| || |||| ||||||| ||||||| |||||    
T  26694931 gttttcagcttattttcataagttcttcaagatagtttatgaaaacaatttataacatatac 26694870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Original strand, 27909647 - 27909700
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaac 285  Q
    |||||||||||||||||||| || |||||||||||||  | ||||||| |||||    
T  27909647 cataagttgttttcagcttatttccataagctctccagtaaagcttataaaaac 27909700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 32386115 - 32386176
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| ||||||||||| |||| || | || || |||||| ||||||    
T  32386115 cataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagcttata 32386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 1401169 - 1401101
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||| ||||| ||||||||  | ||||||||||||| || ||||||| |||||| |||||| |||||||    
T  1401169 ataacttgttctcagcttatctccataagctctccatgatagcttatgaaaacagcttatagcttatac 1401101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 2205610 - 2205654
Alignment:
Q  243 ttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    ||||||||| || |||||||||||||||| ||||||| |||||||    
T  2205610 ttcagcttatttccataagctctccaagatagcttatgaaaacaa 2205654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 2455351 - 2455259
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||| || |  | | || ||||||||||||||||||| ||||| ||  |||||||||  || ||| |||||| ||||||    
T  2455351 agaacttatgaaaacaacttattacattgtttataagttgttttcagcttattttcacaacttctccaagattgcatatgaaaacagcttata 2455259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 4325222 - 4325274
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgaga 191  Q
    |||||||| ||||  | |||| ||||||||||||||||||||||||| |||||    
T  4325222 cctgtttggattgactaattttagtttatctactaacataaacacttgtgaga 4325274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 7785754 - 7785790
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaa 269  Q
    ||||||||||||||||||| || ||||||||||||||    
T  7785754 ataagttgttttcagcttatttccataagctctccaa 7785790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 41170763 - 41170688
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||||    
T  41170763 cctgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaa 41170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 286
Target Start/End: Complemental strand, 8017570 - 8017441
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||| | |||||| ||||| || |||| ||||| |||||||||||||||| | || ||| || ||||||| |||||||| || || |||    
T  8017570 atttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagctta-tgatatgttcataatttgttttctgcgtatttt 8017472  T
Q  256 cataagctctccaagacagcttatcaaaaca 286  Q
    |||||| ||||||||| ||||||| ||||||    
T  8017471 cataagttctccaagatagcttatgaaaaca 8017441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 301
Target Start/End: Complemental strand, 40158867 - 40158710
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgtt 242  Q
    |||| ||||| | |||||||  |||||||| ||||||  |||| ||||| || ||||  ||||||||||||||| | || ||| || || ||||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagctta-tgacatgtttataagttgtt 40158769  T
Q  243 ttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||| |||||||||||||  | | ||||| ||||||||||||  |||||||    
T  40158768 ttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatac 40158710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 12313121 - 12313229
Alignment:
Q  170 actaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 269  Q
    |||| ||||| ||||| ||||||||||||| |||| ||||||||||| | || ||  || ||||||||||| ||||| |||| |||||||||||||||||    
T  12313121 actagcataagcacttgtgagattgtttgggagaatttatgaaaacagctta-tgccatgttcataagttgatttcaccttattttcataagctctccaa 12313219  T
Q  270 gacagcttat 279  Q
    || |||||||    
T  12313220 gatagcttat 12313229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 279
Target Start/End: Complemental strand, 33192346 - 33192216
Alignment:
Q  147 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 246  Q
    |||||| | ||||||| |||||| || ||||||||||| |||||| |||||| |||||||||||||||||   || ||| |||| |||||| ||||||||    
T  33192346 aattggcttatttgagcttatctgctgacataaacactcatgagactgtttg-aagaacttatgaaaacagttta-tgacatatccataagctgttttca 33192249  T
Q  247 gcttaatttcataagctctccaagacagcttat 279  Q
    |||||  || |||||||||||| || |||||||    
T  33192248 gcttatatttataagctctccaggatagcttat 33192216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 35379023 - 35379079
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||    
T  35379023 ttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 230 - 301
Target Start/End: Complemental strand, 1625963 - 1625892
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| ||||||||||| | |||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  1625963 ttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatac 1625892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 279
Target Start/End: Original strand, 43199740 - 43199840
Alignment:
Q  178 aaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagctt 277  Q
    |||||||| ||||| ||||||| |||| ||| ||| ||||| |  ||| || || |||||||||||||||||||||||||||||| |||||||| |||||    
T  43199740 aaacacttgtgagactgtttgggagaagttacgaatacaacttg-tgacatgtttataagttgttttcagcttaatttcataagccctccaagatagctt 43199838  T
Q  278 at 279  Q
    ||    
T  43199839 at 43199840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 43985021 - 43985081
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||| ||||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  43985021 ttttcagcttattttcataagctcttcaagatagcttatgaaaacaacttataatttatac 43985081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 33942058 - 33941901
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 239  Q
    ||||||| ||||| | ||||||| |||||||||  |||||  |||  |||| ||||||   | |||||||||||||||| || ||| |  |||||||| |    
T  33942058 ctgtttggattggcttatttgaggttatctactggcataagtactagtgagtttgttt---ataacttatgaaaacaactta-tgacaagttcataagct 33941963  T
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    | ||||| |||| | |||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  33941962 gctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttatac 33941901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 293
Target Start/End: Complemental strand, 16867805 - 16867739
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| |||| || |||||||||||||||| ||||| | |||||| ||||||    
T  16867805 atattcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttata 16867739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 40776033 - 40776091
Alignment:
Q  158 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||||||||||||||||||| ||||||| |   ||||||||||||||||||||||||    
T  40776033 ttgagtttatctactaacataagcacttataaacctgtttggaagaacttatgaaaaca 40776091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 44443391 - 44443330
Alignment:
Q  223 tgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||||| |||||||||||||||||||||| ||||||| |||||| |||| ||||||| ||||    
T  44443391 tgaaatgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 271
Target Start/End: Original strand, 5902502 - 5902597
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    ||||||||||| ||||| |||||||||||||||||||||||| | || ||| || |||||||  ||||||||||||  ||| ||| | |||||||||    
T  5902502 cataaacacttgtgagactgtttggaagaacttatgaaaacagctta-tgacatgttcataaactgttttcagcttgtttttatatgttctccaaga 5902597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 300
Target Start/End: Complemental strand, 14666684 - 14666541
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| |||| ||||  ||||||||||| |||||   ||  ||||||  |||| ||||||| || ||| || |||||| |||||||||| |||| |||    
T  14666684 atttgagcttatttacttccataaacacttgtgagacgtttcagaagaatatatggaaacaactta-tgacatgttcataggttgttttcaccttatttt 14666586  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||   |||||| ||||| | ||||||||||||||||||||    
T  14666585 cataagcataccaagatagcttgtgaaaacaacttataacttata 14666541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 28677630 - 28677705
Alignment:
Q  193 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaa 269  Q
    ||||||| |||||||||||||||| | || ||| || |||||||||||||||| ||||| || ||||||||||||||    
T  28677630 tgtttgggagaacttatgaaaacagctta-tgacattttcataagttgttttcggcttatttccataagctctccaa 28677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 36863650 - 36863702
Alignment:
Q  248 cttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||| ||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  36863650 cttattttcataagctctccaagatagcttatgaaaacaatttataacttata 36863702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 44064589 - 44064517
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    ||||||||| |||| |||||||||||||||| |||||||    |||| ||||| |||||||||||||||||||    
T  44064589 cctgtttgatttggatcatttgagtttatctgctaacattggaacttgtgagactgtttggaagaacttatga 44064517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 44606081 - 44606148
Alignment:
Q  193 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataag 261  Q
    |||||||||||||||||||||||||| || ||| || | |||||||||||||||||| | |||||||||    
T  44606081 tgtttggaagaacttatgaaaacaactta-tgacatgtccataagttgttttcagctgattttcataag 44606148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 4350841 - 4350766
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||| ||||| | ||||||| || |||||| |||||| |||||| |||||||||||  ||||||||||||||||    
T  4350841 tgtttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaaca 4350766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 9478003 - 9477944
Alignment:
Q  242 tttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||| |||| |||||||| ||||||| || ||||||| |||||||||||||||||||||    
T  9478003 tttcaacttattttcataacctctccaggatagcttatgaaaacaacttataacttatac 9477944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 38078417 - 38078480
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||| |||| | || |||||||||||||||| ||||||| |||||||| ||||    
T  38078417 ttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaacaacctata 38078480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 43911006 - 43911077
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||||||| | ||| ||||| ||||||| ||||| | ||||||||||||  |||||||    
T  43911006 ttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatac 43911077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 286
Target Start/End: Original strand, 8187407 - 8187516
Alignment:
Q  176 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 275  Q
    |||| ||||| ||||| |||||| ||||||||||||| ||||| || |||||| |||  ||||||||||||| ||| || ||||| ||||||| |  |||    
T  8187407 ataaccacttgtgagactgtttgaaagaacttatgaatacaactta-tgaaattttcgcaagttgttttcaggttatttccataatctctccatggtagc 8187505  T
Q  276 ttatcaaaaca 286  Q
    |||| ||||||    
T  8187506 ttatgaaaaca 8187516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 29430894 - 29430836
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    ||||||| ||||||||| |||||||||||| || || | ||||||||||||||||||||    
T  29430894 atttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaa 29430836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 7928306 - 7928347
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    |||||||||||||||||||||| ||||||||| |||||||||    
T  7928306 ttcataagttgttttcagcttattttcataagttctccaaga 7928347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 44590089 - 44590028
Alignment:
Q  238 ttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    |||||||||||||| | ||| ||| ||| ||||| ||||||| |||||||||||||||||||    
T  44590089 ttgttttcagcttattctcacaagttcttcaagatagcttatgaaaacaacttataacttat 44590028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 656787 - 656855
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| ||||||| |||| ||||||||||||| ||||| ||||||| ||| ||||||| | |||||||    
T  656787 ataagtagttttcatcttattttcataagctctgcaagatagcttatgaaatcaacttacagcttatac 656855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 1810716 - 1810657
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||||| |||||||| |||| ||||| ||||||| |||||||| ||||||||||||    
T  1810716 ttttcagcttattttcataaactcttcaagatagcttataaaaacaac-tataacttatac 1810657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 300
Target Start/End: Original strand, 14299565 - 14299708
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||||||| |||| ||| ||| |||||  | || |||||||||||  ||||| ||||||| || ||| |||| ||||  |||||||||||||| ||     
T  14299565 atttgagtttagctaccaacgtaagcacttgagggactgtttggaagagtttatggaaacaactta-tgacatatccatacattgttttcagcttatttc 14299663  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
     ||||||| || |||| ||| | | ||||||||| ||||||||||    
T  14299664 tataagctgtcaaagatagcctgtgaaaacaactcataacttata 14299708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 15978047 - 15977991
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||||| |||||||||||||| |||||||| |||||||| | ||||||| |||||||    
T  15978047 tcataaattgttttcagcttattttcataatctctccaaaatagcttatgaaaacaa 15977991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 18840856 - 18840796
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||| |||| || |||||||||||||||||| ||||| ||| || ||||||    
T  18840856 ataagttgttttcatcttatttccataagctctccaagacatcttataaaaccagcttata 18840796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 29510644 - 29510592
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||| |||||||||||||||||||| |||| ||||||  |||||||||||||    
T  29510644 ttttcggcttaatttcataagctctcaaagatagcttaggaaaacaacttata 29510592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 35486045 - 35485910
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    ||||||||  ||||||  |||| ||||| ||||||  ||||||||  ||| |||| || ||| || |||||||| ||||||||||| | || |||| |||    
T  35486045 ttatctaccgacataagaacttgtgagactgtttgagagaacttactaaagcaactta-tgatatgttcataagctgttttcagctcatttccataggct 35485947  T
Q  264 ctccaagacagcttatcaaaacaacttataacttata 300  Q
    || || || ||||||| ||||||||||||| ||||||    
T  35485946 cttcaggatagcttataaaaacaacttatagcttata 35485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 36043994 - 36043926
Alignment:
Q  203 aacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    |||||||||||||||| |||   | | |||||||| |||||| |||| |||||||||||||||||||||    
T  36043994 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaaga 36043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 40279249 - 40279189
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||| |||||||    
T  40279249 ttttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttatac 40279189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 184 - 301
Target Start/End: Complemental strand, 2142763 - 2142645
Alignment:
Q  184 ttatgagattgtttggaagaacttatgaaaacaacgtactga-aatattcataagttgttttcagcttaatttcataagctct-ccaagacagcttatca 281  Q
    |||||||| ||||||| ||||||||||||||||| ||  ||| ||| ||||| || |||||| |||||| ||||||||  ||| |||||| |  |||| |    
T  2142763 ttatgagactgtttgggagaacttatgaaaacaa-gttgtgacaatgttcattagctgtttttagcttattttcataaattctcccaagataaattatga 2142665  T
Q  282 aaacaacttataacttatac 301  Q
    |||||||||||| |||||||    
T  2142664 aaacaacttatagcttatac 2142645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 9174878 - 9174815
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | ||||||||||| |||||||||||||  |||| ||||||| |||||| ||||||    
T  9174878 ttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttata 9174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 11514047 - 11513972
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||| ||||||| ||||||| |||||||||| ||||| ||||| ||||| |||||   ||| ||||||||||||    
T  11514047 tgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaaca 11513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 287
Target Start/End: Complemental strand, 15120311 - 15120189
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    |||||||||| |||||||| || |||   ||||||| ||| |||||| ||||||| || ||| || ||||| || |||||| |||||| ||| |||||||    
T  15120311 ttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaactta-tgacatgttcattagctgttttaagcttattttgataagct 15120213  T
Q  264 ctccaagacagcttatcaaaacaa 287  Q
    ||||| || ||||||  |||||||    
T  15120212 ctccatgatagcttacgaaaacaa 15120189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 16551782 - 16551880
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    ||||||| | ||||||||||||  |||||||||| ||||| |||||| ||| | | || ||| |||| |||||||||| ||||||||| || ||||||||    
T  16551782 ttatctattgacataaacacttgcgagattgtttagaagagcttatggaaagatctta-tgacatatacataagttgtattcagcttatttccataagct 16551880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 29316782 - 29316845
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||| ||||||||||| || |||||| ||||||||| |||| || |||||| ||||||    
T  29316782 ttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttata 29316845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 29628750 - 29628821
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||| |||||||||||||| || |||||  | ||||||| ||||||| | ||||||||||| |||||||    
T  29628750 ttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatac 29628821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 39983394 - 39983335
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||| ||| |||||| ||||||||| || ||||||| ||||||||||||| ||||||    
T  39983394 ttttcagtttattttcattagctctccaggatagcttatgaaaacaacttatagcttata 39983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 40279355 - 40279268
Alignment:
Q  205 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||| ||  | | | |||||||  ||||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 292
Target Start/End: Complemental strand, 40279425 - 40279338
Alignment:
Q  205 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||| ||  | | | |||||||  ||||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 41851598 - 41851535
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | || |||||||||||||||||  ||||||||| ||||| | |||||||||||||    
T  41851598 ttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttata 41851535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 3078651 - 3078709
Alignment:
Q  234 taagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    ||||||||||| |||||| || || ||||||||||||| ||||||| |||||| |||||    
T  3078651 taagttgtttttagcttatttccagaagctctccaagatagcttataaaaacagcttat 3078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Original strand, 6772528 - 6772590
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||| | ||||||||||| ||||||||||||||| ||| | ||||| |||| ||||||||    
T  6772528 tcataagcttttttcagcttactttcataagctctcctagataccttatgaaaataacttata 6772590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 10563567 - 10563633
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    |||||| | ||||||||||| |||| |||||||| ||  | ||||||| ||||||||||||||||||    
T  10563567 cataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaacaacttataactta 10563633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 11488339 - 11488277
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||||||||| || ||||| ||||||| || ||||||| ||| || ||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 12140660 - 12140606
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||| ||||||||||||| || || |||||  ||||||||||||||||||    
T  12140660 ttatctactgacataaacacttacgaaatagtttgagagaacttatgaaaacaac 12140606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Complemental strand, 13867014 - 13866952
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||| |||||||||  ||||||||||| ||||| ||||||  |||||||| |||||||||    
T  13867014 atttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaac 13866952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 40145580 - 40145526
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||| ||||||||||||||||| |||||||  |||||||||  |||||||    
T  40145580 ttatctactgacataaacacttatgagcttgtttgagagaacttatcgaaacaac 40145526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 277
Target Start/End: Original strand, 41809198 - 41809299
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 274  Q
    ||||||||||| ||||| || ||| |||| ||| || ||||||| || ||| || ||||||||||||||| |||||| || |||||||| || |||| ||    
T  41809198 cataaacacttgtgagactgattgtaagagcttgtggaaacaactta-tgacatgttcataagttgtttttagcttatttccataagctttctaagatag 41809296  T
Q  275 ctt 277  Q
    |||    
T  41809297 ctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 1056116 - 1056196
Alignment:
Q  209 tgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||||||||| || ||| || ||||| |||||||||||||||  ||||||||||||| || || ||||| | ||||||||||    
T  1056116 tgaaaacaactta-tgacatgttcattagttgttttcagcttgttttcataagctctacatgagagcttgtgaaaacaactt 1056196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 1493518 - 1493551
Alignment:
Q  228 tattcataagttgttttcagcttaatttcataag 261  Q
    |||||||||||||||||||||||| |||||||||    
T  1493518 tattcataagttgttttcagcttattttcataag 1493551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 292
Target Start/End: Complemental strand, 7871705 - 7871644
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    ||||||| ||||||||||||| || |||||||||| ||| | ||||||| |||||| |||||    
T  7871705 tcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaacagcttat 7871644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 12289864 - 12289795
Alignment:
Q  226 aatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataac 295  Q
    |||||||||||| | |||||| |||| ||||||||| ||||||| | |  |||| |||||||||||||||    
T  12289864 aatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataac 12289795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 19333322 - 19333371
Alignment:
Q  220 tactgaaatattcataagttgttttcagcttaatttcataagctctccaa 269  Q
    |||||| || |||||||| |||| |||||||| |||||||||||||||||    
T  19333322 tactgacatgttcataagctgttctcagcttattttcataagctctccaa 19333371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 35378539 - 35378580
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    |||||||||| ||||||||||| ||||||||||| |||||||    
T  35378539 ttcataagttattttcagcttattttcataagctatccaaga 35378580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 39236499 - 39236564
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||||||| |||||| ||| ||||||| |  |||| || |||| ||||||||||||    
T  39236499 atattcataagttgtttttagcttatttttataagctttttaagatagtttattaaaacaacttat 39236564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 40279461 - 40279408
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||| |||| ||||||||| ||||||| | ||||||| ||||||||||||    
T  40279461 tgttttcaacttattttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 40400817 - 40400894
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||||| ||||| | |||| ||  |||||||| ||||||| |||| ||| |||||||| || ||||||||||||||    
T  40400817 cctgtttggattggcttatttaagcctatctactgacataaagacttgtgacattgtttgaaaaaacttatgaaaaca 40400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 290
Target Start/End: Original strand, 43065433 - 43065517
Alignment:
Q  205 cttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||||||||||||| || ||| || | ||||| |||||||||||||| ||  |||||||||||| || | ||||| ||||||||||    
T  43065433 cttatgaaaacaactta-tgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaactt 43065517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 43530032 - 43530105
Alignment:
Q  143 tttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    ||||| |||| | ||||||| | |||||||||||||  ||||| ||||| || |||| ||||||||||||||||    
T  43530032 tttgatttggcttatttgagctaatctactaacatatgcacttgtgagagtgcttgggagaacttatgaaaaca 43530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 3227691 - 3227747
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||||| |||||||||||||| ||||| || |||||||| | ||||||| |||||||    
T  3227691 tcataaattgttttcagcttattttcaaaatctctccaaaatagcttatgaaaacaa 3227747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 6227811 - 6227751
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||||||  |  |||||||||||||| | ||||||| ||||| |||||||    
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttata 6227751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 9530737 - 9530789
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||||||| |||| |||||| |||||||||||||||| || ||||||| ||||    
T  9530737 cataagttatttttagcttactttcataagctctccaggatagcttatgaaaa 9530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 14364197 - 14364257
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| |||| ||||||||| ||| ||||  ||||  |||||||||||||||||||||||    
T  14364197 ttttcaacttattttcataagttcttcaaggtagctcctcaaaacaacttataacttatac 14364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 288
Target Start/End: Complemental strand, 24097861 - 24097813
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaac 288  Q
    |||||||||||| |||||||||||||||| || | ||||| ||||||||    
T  24097861 gttttcagcttattttcataagctctccaggataacttatgaaaacaac 24097813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 33942213 - 33942145
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    |||||||| ||||||||||| | |||||| ||||||| | ||  |||||| ||||||||||||| ||||    
T  33942213 ttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34652045 - 34652097
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||||| |||||||| |||| || |||||||||||||||| ||||||| ||||    
T  34652045 cataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 34927097 - 34927045
Alignment:
Q  158 ttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 210  Q
    ||||| |||| |||| |||||| ||||||| ||| ||||||||||||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttatg 34927045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 9956821 - 9956891
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||| |||||||||||| ||||||||| ||||||||| || |||| ||||||||||||||||||||    
T  9956821 ttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttataacttata 9956891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 265
Target Start/End: Complemental strand, 6950458 - 6950350
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||||||||||||||||  |||||||| || ||||||||||||| ||| |||||| ||||||| || ||| || |  ||||||||||||||||||| ||     
T  6950458 atttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaaccta-tgacatgtcgataagttgttttcagcttatttc 6950360  T
Q  256 cataagctct 265  Q
    ||||||||||    
T  6950359 cataagctct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 2487927 - 2488004
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||| ||||| | ||||||||| ||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaac 2488004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 16162913 - 16162836
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||||| ||||| ||||||  | ||||||||||||||    
T  16162913 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaaca 16162836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 139 - 298
Target Start/End: Original strand, 7918699 - 7918848
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagt 238  Q
    ||||||||||||| || |||| |  |||||||||| ||||||||||| ||||| ||||||| ||| |||||||||||||| ||         | ||||      
T  7918699 cctgtttgaattgatt-atttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaactta---------ttataatc 7918788  T
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||||| || || ||||||| ||||| ||||||| ||||||||||||| ||||    
T  7918789 tgttttcagcttatttccacaagctctacaagatagcttatgaaaacaacttatagctta 7918848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 27028894 - 27028831
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttata 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 293
Target Start/End: Complemental strand, 7714359 - 7714242
Alignment:
Q  175 cataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacag 274  Q
    ||||||||||| ||||| ||||||||| | ||| || ||||||| || |||||| |  || || |||||||| |||| |||||| |||||||||||| ||    
T  7714359 cataaacacttgtgagactgtttggaaaagcttgtggaaacaactta-tgaaatgtcgatgagctgttttcaacttattttcatgagctctccaagatag 7714261  T
Q  275 cttatcaaaacaacttata 293  Q
    || || |||||||||||||    
T  7714260 ctcatgaaaacaacttata 7714242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 42215089 - 42215143
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||| ||||    
T  42215089 ttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 293
Target Start/End: Complemental strand, 778505 - 778389
Alignment:
Q  176 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 275  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||| ||  || |  ||  ||||||||||||| |||| ||||||||||||||||| |  ||    
T  778505 ataagcacttgtgagactgtttgcaagaacttatgaaaacaacataa-gacacgtttgtaagttgttttcaacttactttcataagctctccaacaatgc 778407  T
Q  276 ttatcaaaacaacttata 293  Q
    |||| |||||| ||||||    
T  778406 ttatgaaaacagcttata 778389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 34849240 - 34849095
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||| |||||  |||||  |||| ||||| ||||||| |||||| ||||||||||| |  ||| || ||||||||  |||||||||| | ||     
T  34849240 atttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactttatgacatgttcataagccgttttcagctgatttc 34849141  T
Q  256 cataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| ||| ||||| ||||||| | |||| |||||| |||||||    
T  34849140 cataagttctacaagaaagcttatgataacagcttatatcttatac 34849095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 20672813 - 20672757
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    |||||||| ||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  20672813 ttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaaca 20672757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 28769348 - 28769416
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||| || ||||| |||||||| | ||||||| |||||| |||||| ||||||    
T  28769348 cataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttata 28769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 30918176 - 30918116
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||||||||||||||||||||| || |||||||||||||||| | ||||| |||| |||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaagaactt 30918116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 43717945 - 43718013
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    ||||||| |||||| |||||| ||||||||| ||||||||| |||||||  ||||| ||||||||||||    
T  43717945 tcataagctgtttttagcttactttcataagttctccaagatagcttatgcaaacagcttataacttat 43718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 1664505 - 1664450
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||    
T  1664505 atttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 1664450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 286
Target Start/End: Original strand, 779027 - 779124
Alignment:
Q  188 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||| ||||||||| ||||||||| || ||| || ||||||||||||||||| |||| |||  ||  |||||||||| || |||| ||||||    
T  779027 gagattgtttgaaagaacttacgaaaacaactta-tgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaaca 779124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 30389162 - 30389092
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||||| ||||||||| |||| | || ||||||| |||||| | |||| ||||||    
T  30389162 ttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttata 30389092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 286
Target Start/End: Original strand, 44236757 - 44236886
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||||||||||||||||  ||||| ||||| ||||| |||| || ||||  |||||||| | |  || || ||  || |||||| ||||||||||| |||    
T  44236757 atttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaatagctcac-gacatgctcttaagttattttcagcttatttt 44236855  T
Q  256 cataagctctccaagacagcttatcaaaaca 286  Q
    |||||||||||||| | ||||||| ||||||    
T  44236856 cataagctctccaatatagcttatgaaaaca 44236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 233 - 290
Target Start/End: Complemental strand, 4762569 - 4762512
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||| |||||||||||||| || |||||||||| ||||| ||||||| ||||||||||    
T  4762569 ataaattgttttcagcttatttacataagctcttcaagatagcttatgaaaacaactt 4762512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 8062390 - 8062321
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| ||||||||||||| || ||||| ||||| |||| ||||||| |||||| |||||| |||||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttatac 8062321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 11569466 - 11569527
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| ||||| || ||||||| || ||||||| |||||| ||||||    
T  11569466 cataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 31862554 - 31862485
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||| ||||||||||||| |||||||||||||| | || | ||||| |||||| |||||| |||||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatac 31862485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 301
Target Start/End: Complemental strand, 38421325 - 38421256
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||||||||| || || ||| ||| ||||| ||||| | ||||||||||| |||||||||    
T  38421325 cataagttgttttcagcttacttacacaagatcttcaagatagcttttgaaaacaacttacaacttatac 38421256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 293
Target Start/End: Complemental strand, 43504879 - 43504751
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    |||||||||  | ||| ||||| || || ||||| | |||||| ||||||||||| ||| ||  | || ||||| ||||||||||||| || |||||| |    
T  43504879 ttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaacttac-gacttgtttataagctgttttcagcttatttccataagtt 43504781  T
Q  264 ctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||| |||||| ||||||    
T  43504780 ctccaagatagcttataaaaacatcttata 43504751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 1930098 - 1930034
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    |||||||| ||||||||||||| ||||| ||| || |||||| ||||||| |||||| |||||||    
T  1930098 ttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttataa 1930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 11745662 - 11745722
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||||||| |||||||||||| | | || ||||||| |||||| ||||||    
T  11745662 ataagttgttttcagcttagtttcataagctcactaggatagcttataaaaacagcttata 11745722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 27754464 - 27754404
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||  ||||||||| ||||||||||||||||| | ||||||| ||||| |||||||    
T  27754464 ataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaaccacttata 27754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 31705146 - 31705078
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| ||||||||||||| || ||||| ||||| | |||||||||| |||||| |||||| ||||||    
T  31705146 cataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttata 31705078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 31804467 - 31804531
Alignment:
Q  236 agttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||  |||||||||||||| |||| |||| || |||||  |||||||||||||    
T  31804467 agttgttttcagcttcctttcataagctctcaaagatagctcatgaaaactgcttataacttata 31804531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 1892158 - 1892213
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    ||||||||||||||||   ||||||||||| ||||||||||||| ||| |||||||    
T  1892158 atttgagtttatctaccgtcataaacacttgtgagattgtttggcagagcttatga 1892213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 287
Target Start/End: Complemental strand, 12851295 - 12851182
Alignment:
Q  175 cataaacacttatga--gattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagac 272  Q
    ||||||||||| |||  || ||||||| | |||||||||||||| | || | | || |||||||| ||||||| ||||| |||||||||||||| | ||     
T  12851295 cataaacacttgtgatagactgtttgggaaaacttatgaaaacagctta-taacatgttcataagatgttttcggcttattttcataagctctcaaggaa 12851197  T
Q  273 agcttatcaaaacaa 287  Q
    ||||||| |||||||    
T  12851196 agcttatgaaaacaa 12851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 33714243 - 33714306
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||| ||||||| |||| | ||||||    
T  33714243 ttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttata 33714306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 2595004 - 2595066
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||||||||||||| | ||||||| | || ||  |||||||| ||||||||||||    
T  2595004 ttcataagttgttttcagcttattctcataagttgtctaatgcagcttatgaaaacaacttat 2595066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 4560638 - 4560584
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatg 210  Q
    ||||||| ||||||| | |||||| ||||| |||| |||||||||||||||||||    
T  4560638 atttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatg 4560584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 5069760 - 5069690
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||  ||||||||||| ||||||||||| || |||| | ||||| |||||| ||||||| |||||    
T  5069760 ttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaacagcttataaattata 5069690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 7918412 - 7918513
Alignment:
Q  188 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||| ||||||| ||| |||||||||||||| ||  || || |||||||| ||||| || |||| ||  ||||||||||||||| ||||||  |||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaacttaa-gacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T
Q  288 ctt 290  Q
    |||    
T  7918511 ctt 7918513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 8060732 - 8060662
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||| ||||||||||| || ||||||||||| | ||  |||||| |||||| ||||||| |||||    
T  8060732 ttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttataagttata 8060662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 21653144 - 21653098
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagct 276  Q
    |||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  21653144 ttcataagctattttcagcttattttcataagctctccaagatagct 21653098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 37353253 - 37353319
Alignment:
Q  227 atattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||  ||||||||| ||| |||||||||||||| |||| ||||||  |||||| ||||||    
T  37353253 atattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttata 37353319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 38648413 - 38648343
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    ||||||| | |||| ||| |||||||||||| ||| ||||| ||||||| ||||||||| ||||| |||||    
T  38648413 tcataagcttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaactcataacatatac 38648343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 298
Target Start/End: Original strand, 6864477 - 6864534
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||| || |  ||||||||||| | ||||||| ||||||||||||||||||    
T  6864477 ttttcagcttatttcctcaagctctccaaaatagcttatgaaaacaacttataactta 6864534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 11494208 - 11494155
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    ||||||| || |||||||||| ||||||||||||| ||||| ||||||| ||||    
T  11494208 tcataagctgctttcagcttattttcataagctcttcaagatagcttatgaaaa 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 11795146 - 11795085
Alignment:
Q  239 tgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||| || |||||||||||||  | ||||||| ||| || |||||||||||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttata 11795085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 13652347 - 13652298
Alignment:
Q  161 agtttatctactaacataaacacttatgagattgtttggaagaacttatg 210  Q
    |||||||||||| |||||| ||||| |||| |||||||||||| ||||||    
T  13652347 agtttatctactcacataagcacttgtgaggttgtttggaagagcttatg 13652298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 13710990 - 13710941
Alignment:
Q  161 agtttatctactaacataaacacttatgagattgtttggaagaacttatg 210  Q
    |||||||||||| |||||| ||||| |||| |||||||||||| ||||||    
T  13710990 agtttatctactcacataagcacttgtgaggttgtttggaagagcttatg 13710941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 30191075 - 30191211
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||||||||||| |  ||||| ||||| | ||| ||||||| ||| |||||| ||||||| || ||| || |||| || |||||||||||||| ||     
T  30191075 atttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaactta-tgacatgttcaaaacttgttttcagcttatttc 30191173  T
Q  256 cataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||| |  | || || |||||||||||| | ||||||    
T  30191174 cataaacatttcaggatagcttatcaaaatagcttata 30191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Original strand, 30277254 - 30277315
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||| || ||||| ||||| | || ||||||| |||||| ||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 293
Target Start/End: Original strand, 39551143 - 39551279
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    ||||||| ||||||||  | |||| || || ||| | ||||||| |||| ||||| ||||||| || ||| || | || ||| |||||| | |||| |||    
T  39551143 atttgagattatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaactta-tgacatgtccaaaagctgtttttaacttatttt 39551241  T
Q  256 cataagctctccaagacagcttatcaaaacaacttata 293  Q
     |||||||||||| || ||||||| |||||||||||||    
T  39551242 tataagctctccaggaaagcttatgaaaacaacttata 39551279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 2213552 - 2213484
Alignment:
Q  148 attggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    ||||||| ||||||  |||||||||| ||||||||||| ||| | ||||||| || | |||||||||||    
T  2213552 attggtttatttgaaattatctactagcataaacacttgtgatactgtttggtagtagttatgaaaaca 2213484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 294
Target Start/End: Complemental strand, 11185284 - 11185220
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||||||||||||||| |||| || ||| ||||||||| || |||| |  ||||||||||||||    
T  11185284 ttcataagttgttttcaacttatttccatcagctctccatgatagctaacgaaaacaacttataa 11185220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 39881769 - 39881821
Alignment:
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||||||||||| || ||||||||||||| || ||||||| ||||||| ||||    
T  39881769 gttttcagcttatttccataagctctccatgatagcttataaaaacaatttat 39881821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 30573857 - 30573977
Alignment:
Q  165 tatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctc 264  Q
    |||||||| |||||| ||||| |||| |||||||  |||||||||||||||||  || ||  || |||||||| |||||||||||||  ||||| |||||    
T  30573857 tatctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaaatta-tggcatgttcataagctgttttcagcttatgttcatcagctc 30573955  T
Q  265 tccaagacagcttatcaaaaca 286  Q
    ||||||| ||||||| ||||||    
T  30573956 tccaagatagcttatgaaaaca 30573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 164 - 300
Target Start/End: Complemental strand, 43115184 - 43115049
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagct 263  Q
    ||||||| | |||||| ||||| |||||||||||||||||  ||||| ||||||| || ||| || | ||||| |||||||||||||| || ||||||||    
T  43115184 ttatctattgacataatcacttgtgagattgtttggaagagtttatggaaacaactta-tgacatgtccataacttgttttcagcttatttccataagct 43115086  T
Q  264 ctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||| | || || | || ||||||||||||| ||||||    
T  43115085 ctcaatgatagttcatgaaaacaacttatagcttata 43115049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 30657438 - 30657375
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaaga 203  Q
    |||||||||||| || ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  30657438 ctgtttgaattgatttatttgagtttatctactgacataagcacttttgagattgtttggaaga 30657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 301
Target Start/End: Original strand, 39602183 - 39602288
Alignment:
Q  195 tttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataa 294  Q
    ||||||||| |||||||| ||| | || ||| || ||||||| ||||||||| |||| ||||||||| |||| |||| ||||||| |||||| |||||||    
T  39602183 tttggaagagcttatgaagacagctta-tgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataa 39602281  T
Q  295 cttatac 301  Q
    |||||||    
T  39602282 cttatac 39602288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 21367767 - 21367667
Alignment:
Q  193 tgtttggaagaacttatgaaaacaacgtactgaaata-ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    ||||||| |||||||||||||||| | || ||| ||  |||| ||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||||||    
T  21367767 tgtttgggagaacttatgaaaacagctta-tgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaactta 21367669  T
Q  292 ta 293  Q
    ||    
T  21367668 ta 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 44014715 - 44014792
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||||||| ||||| | |||||||||||||||||| ||||||||||| ||||| ||||||  | ||||||||||||||    
T  44014715 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaaca 44014792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 268
Target Start/End: Complemental strand, 24281183 - 24281072
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||||||| ||||||||   |||| ||||| || |||||||||  ||| |||||||||||||| || ||| || | ||||||||||||||| |||| |||    
T  24281183 atttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaactta-tgatatctccataagttgttttcaacttacttt 24281085  T
Q  256 cataagctctcca 268  Q
    |||||||||||||    
T  24281084 cataagctctcca 24281072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 230 - 298
Target Start/End: Complemental strand, 40665492 - 40665424
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| | ||||| |||||| |||||||||||    
T  40665492 ttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataactta 40665424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 402549 - 402620
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||| ||||||||||||||||||| ||| ||| ||||| || |||| |||||| ||||||||||||||    
T  402549 ttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatac 402620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Original strand, 14548680 - 14548798
Alignment:
Q  181 cacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatc 280  Q
    ||||| ||||| ||||||  ||| ||||||||||||||||| ||| || || ||| | ||||||||||||| || |||||||||||||  | | |||||     
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgta-tgacattttaataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  281 aaaacaacttataacttata 300  Q
    ||||||||||||| ||||||    
T  14548779 aaaacaacttatagcttata 14548798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 291
Target Start/End: Original strand, 54837000 - 54837102
Alignment:
Q  188 gagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaa 287  Q
    |||| |||||||||||| ||||||||||| | || ||| || ||||||| |||||||| ||||| ||| ||||||| ||||||| ||||||| |||| ||    
T  54837000 gagactgtttggaagaatttatgaaaacagctta-tgacatgttcataacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataa 54837098  T
Q  288 ctta 291  Q
    ||||    
T  54837099 ctta 54837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 41848650 - 41848708
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaa 214  Q
    |||||||||||||||||||||||||||||| | |||||||||| | || ||||||||||    
T  41848650 atttgagtttatctactaacataaacacttgtaagattgtttgtacgagcttatgaaaa 41848708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 45541687 - 45541563
Alignment:
Q  176 ataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagc 275  Q
    |||||||||| | ||| ||||| |||||||||||||||||| | || ||| || |||||||| ||||||||| ||| | ||||||| | ||||||| |||    
T  45541687 ataaacacttgtaagactgtttagaagaacttatgaaaacagctta-tgacatgttcataagctgttttcaggttattctcataagttatccaagatagc 45541589  T
Q  276 ttatcaaaacaacttataacttatac 301  Q
    |||| |||| ||  |||| |||||||    
T  45541588 ttatgaaaataaactatagcttatac 45541563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 201 - 301
Target Start/End: Complemental strand, 1816674 - 1816575
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||| |||||||| ||| || ||| || |||||| | ||||||||||||| ||| ||||||||||||  | ||||||| ||||||||||||| ||||||    
T  1816674 agaacatatgaaaataactta-tgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttata 1816576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 18405854 - 18405901
Alignment:
Q  246 agcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  18405854 agcttaatttcataagttctccaagatagcttatgaaaacaacttata 18405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 20669235 - 20669172
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||| ||||| || |||||||||||||||| ||||||| |||||| ||||||    
T  20669235 ttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 25776180 - 25776117
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||||||| || |||||| ||| ||||||| ||||| |||||||||||||    
T  25776180 ttcataagctgttttcagcttacttccataagttcttcaagacaacttatgaaaacaacttata 25776117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 33883757 - 33883820
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||||||||||||||||| ||||||||| |||| |||| |||||||  ||||||| ||||    
T  33883757 ttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatata 33883820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 297
Target Start/End: Original strand, 34610813 - 34610880
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactt 297  Q
    ||||||||| |||||||||| | ||||||||| || |||||| ||||||| ||| |||||||||||||    
T  34610813 ttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttataactt 34610880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 36887567 - 36887504
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| ||||||||||||| ||||||||| ||| |||||  |||||| |||||||||||||    
T  36887567 ttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 286
Target Start/End: Complemental strand, 37273239 - 37273141
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||| ||||||| ||| |||||| ||||||| || ||| || | ||||||||||||||| |||| || |||||| ||||||||| ||||||| ||||||    
T  37273239 tgagactgtttgggagagcttatggaaacaactta-tgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaaca 37273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 51130851 - 51130749
Alignment:
Q  191 attgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    ||||||||| ||| ||||||||||| | ||| ||| || | ||||||||| |||||||||| |||||  ||||||||| || ||||||| |||||| |||    
T  51130851 attgtttgggagagcttatgaaaaccatgta-tgacatgtccataagttgctttcagcttattttcaatagctctccatgatagcttatgaaaacacctt 51130753  T
Q  291 ataa 294  Q
    ||||    
T  51130752 ataa 51130749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 293
Target Start/End: Original strand, 53789468 - 53789531
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | ||||||||||||||||||||| |||||| || ||||||| | |||||||||||    
T  53789468 ttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttata 53789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 298
Target Start/End: Original strand, 1217809 - 1217875
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 298  Q
    ||||||||||||||| |||| ||||||||| |||| | || ||||||| |||||| |||||||||||    
T  1217809 cataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataactta 1217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 2719529 - 2719475
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||| ||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaaca 2719475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 11253653 - 11253495
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagtt 239  Q
    ||||||||||||  | ||||||| |||||||||| ||||| |||||  |||| ||||||| |||| |||| |||||||| || ||| ||||  ||||  |    
T  11253653 ctgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaactta-tgacatatctataaact 11253555  T
Q  240 gttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||| || || | ||||||||| | || |||||||  ||||| |||||| ||||||    
T  11253554 gttttcagcctatttccctaagctctctaggatagcttat-gaaacagcttatagcttata 11253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 25459548 - 25459616
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaactta 208  Q
    ||||||| |||| || ||||||| ||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  25459548 ctgtttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaagagctta 25459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 34383002 - 34382934
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttatac 301  Q
    |||||||||||||| |||| |||| |||||| | || || ||||||| |||| ||||||||||||||||    
T  34383002 ataagttgttttcatcttattttcttaagcttttcaggatagcttatgaaaagaacttataacttatac 34382934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 34924547 - 34924599
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||| ||||||||||||||| |||||||||||||| |||| ||||||| ||||    
T  34924547 catatgttgttttcagcttattttcataagctctctaagatagcttatgaaaa 34924599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 47249455 - 47249534
Alignment:
Q  191 attgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaaga 271  Q
    |||||||| |||||||||||||||| || || ||| || |||||||||||||||  ||||| |||||||||  ||||||||    
T  47249455 attgtttgaaagaacttatgaaaaccactta-tgacatgttcataagttgtttttggcttattttcataagtcctccaaga 47249534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 276
Target Start/End: Complemental strand, 47513765 - 47513670
Alignment:
Q  180 acacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagct 276  Q
    |||||| ||||| |||| || || ||||||||||||||  || ||| |  |||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  47513765 acacttgtgagactgttcgggaggacttatgaaaacaagtta-tgacacgttcataagttgttttcaatttattttcataagctctccaagatagct 47513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 39980792 - 39980729
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    |||||||| | |||||| |||| ||||||||| ||||||| | ||||||| |||||||||||||    
T  39980792 ttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttata 39980729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 41633420 - 41633361
Alignment:
Q  233 ataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    |||| |||||||||||||| ||||||||||||||||| | |||| || |||||| |||||    
T  41633420 ataaattgttttcagcttattttcataagctctccaaaatagctgatgaaaacagcttat 41633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 42745174 - 42745068
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaattt 255  Q
    |||| ||||||  ||||| ||||| ||||| ||| ||| ||| |||||| ||||| ||||||| || ||| || ||||||||||||||||| |||| ||     
T  42745174 atttaagtttacttactatcataagcacttgtgatattatttagaagaatttatgtaaacaactta-tgacatgttcataagttgttttcatcttatttc 42745076  T
Q  256 cataagct 263  Q
    ||||||||    
T  42745075 cataagct 42745068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 44237571 - 44237524
Alignment:
Q  138 acctgtttgaattggttcatttgagtttatctactaacataaacactt 185  Q
    |||||||| |||||||| ||||||||||||||||| |||||| |||||    
T  44237571 acctgtttaaattggtttatttgagtttatctactgacataagcactt 44237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 48286729 - 48286887
Alignment:
Q  141 tgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttg 240  Q
    ||||||||||| || ||||||| ||||||||  ||| |||||| | ||||| | || || |||||||||||||||||| ||| || || | |||||   |    
T  48286729 tgtttgaattgatttatttgagcttatctacggacaaaaacacctttgagactattagggagaacttatgaaaacaacctac-gacatgtccataaaccg 48286827  T
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    || |||||||| ||  ||||||||| || || | ||||| ||||||  ||||||||||||    
T  48286828 ttatcagcttatttctataagctctacatgataacttatgaaaacagtttataacttata 48286887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 2825199 - 2825149
Alignment:
Q  241 ttttcagcttaatttcataagctctccaagacagcttatcaaaacaactta 291  Q
    |||| |||||| ||||||||||||||||||| ||||||| |||| ||||||    
T  2825199 ttttaagcttattttcataagctctccaagatagcttatgaaaataactta 2825149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 24085316 - 24085414
Alignment:
Q  201 agaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttat 299  Q
    |||||||||||||||| | ||  | | | |||||| | ||||||||||||| ||||| ||| ||||||||| ||||||  ||||||| ||||| |||||    
T  24085316 agaacttatgaaaacagcttatggtactgttcatacgctgttttcagcttattttcacaagttctccaagatagcttacaaaaacaaattatagcttat 24085414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 50211863 - 50211809
Alignment:
Q  164 ttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||||||||||||| ||||| | ||| ||||||  ||||||||||||||||||    
T  50211863 ttatctactaacataagcacttgtaagactgtttgagagaacttatgaaaacaac 50211809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 50600149 - 50600254
Alignment:
Q  193 tgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttat 292  Q
    ||||||||||||||||| ||||||||  | ||| || | ||  || ||||||||||||| ||||||||| ||||||| | |||| || |||||| |||||    
T  50600149 tgtttggaagaacttataaaaacaactca-tgacatgtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttat 50600247  T
Q  293 aacttat 299  Q
    | |||||    
T  50600248 agcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 52619066 - 52618996
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||| | |||||| |||| ||||| ||||||| ||||| ||||| | |||||| |||||||||||||    
T  52619066 ttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttata 52618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 1125778 - 1125843
Alignment:
Q  235 aagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||| |||||||||| || |||||||||||||||| | ||||  ||||||| ||||| ||||||    
T  1125778 aagttgctttcagcttacttccataagctctccaagataacttaagaaaacaagttatagcttata 1125843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 268
Target Start/End: Complemental strand, 21574595 - 21574515
Alignment:
Q  187 tgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctcca 268  Q
    ||||| ||||||| ||| |||||||||||||| || ||| || |||||||| || ||| |||||| || |||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaactta-tgacatgttcataagctgcttttagcttatttccataagctctcca 21574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 293
Target Start/End: Complemental strand, 25186046 - 25185985
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||||||||| |||| ||||| ||| | ||||||| ||||||| ||||| |||||||    
T  25186046 cataagttgttttcatcttattttcacaagatttccaagatagcttataaaaaccacttata 25185985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 35903085 - 35903158
Alignment:
Q  140 ctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaa 213  Q
    ||||||||||||  | ||||||||| ||| |||||||||| ||||||||| | |||||   |||||||||||||    
T  35903085 ctgtttgaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 40665555 - 40665514
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgttt 197  Q
    |||| ||||||||||||||||||||||||||  |||||||||    
T  40665555 atttaagtttatctactaacataaacacttagtagattgttt 40665514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 44061032 - 44061100
Alignment:
Q  231 tcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||| |||||| |||||||||||||||| |||| |||| | | ||| ||||||||||||| ||||||    
T  44061032 tcataagctgtttt-agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttata 44061100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 48991912 - 48991875
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaa 269  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  48991912 cataagttgttttcagcttattttcataatctctccaa 48991875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 16790387 - 16790439
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaa 284  Q
    |||||| ||||||||| ||| ||||||||||| ||||||| ||||||| ||||    
T  16790387 cataagctgttttcagtttattttcataagctatccaagatagcttatgaaaa 16790439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 276
Target Start/End: Original strand, 21862184 - 21862228
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagct 276  Q
    |||||||||||||||||||| || |||||||||||| ||| ||||    
T  21862184 cataagttgttttcagcttatttccataagctctcccagatagct 21862228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 22203470 - 22203430
Alignment:
Q  253 tttcataagctctccaagacagcttatcaaaacaacttata 293  Q
    ||||||||| ||||||||| ||||||| |||||||||||||    
T  22203470 tttcataagttctccaagatagcttatgaaaacaacttata 22203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 23785316 - 23785248
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    |||||||||||||||||||  || ||||||||||||| || ||||| | ||||||  ||||| ||||||    
T  23785316 cataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttata 23785248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 24785268 - 24785212
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaaca 286  Q
    ||||||||||||||| |||||| || ||||||||||| | || ||||||| ||||||    
T  24785268 ttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaaca 24785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 25447677 - 25447625
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaactta 208  Q
    |||| ||||| ||| || |||||| |||||||||||||||| |||||||||||    
T  25447677 attttagtttctctcctgacataagcacttatgagattgttaggaagaactta 25447625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 26330248 - 26330363
Alignment:
Q  147 aattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgtactgaaatattcataagttgttttca 246  Q
    ||||| || ||||||| ||||||||| | ||||  | || ||||| ||||| ||||| |||||||||||||| | |||| || |||||| ||| ||||||    
T  26330248 aattgatttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaac-ttctgacatgttcataggttcttttca 26330346  T
Q  247 gcttaatttcataagct 263  Q
    | ||| || ||||||||    
T  26330347 ggttatttccataagct 26330363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 34414793 - 34414829
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctcca 268  Q
    |||||||||||||||||||| |||||||| |||||||    
T  34414793 cataagttgttttcagcttattttcataaactctcca 34414829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 48397703 - 48397651
Alignment:
Q  166 atctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    |||||||| ||||| || || ||||||||||||||||| || |||||||||||    
T  48397703 atctactagcataagcatttgtgagattgtttggaagagctaatgaaaacaac 48397651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 49465599 - 49465659
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaaca 216  Q
    |||| ||||||| ||||| ||||| ||||| ||| ||||||| | ||||||||||||||||    
T  49465599 atttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaaca 49465659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 50016017 - 50015957
Alignment:
Q  161 agtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaacgta 221  Q
    |||||||||| |  ||||||||||| ||||| ||||||  |||||||||||||| ||||||    
T  50016017 agtttatctattggcataaacacttgtgagactgtttgagagaacttatgaaaagaacgta 50015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 16171 - 16103
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttata 300  Q
    ||||||||||||||| |||| || ||||| || ||||||||||||||  ||||||||||||| ||||||    
T  16171 cataagttgttttcaacttatttccataatctttccaagacagcttaggaaaacaacttatatcttata 16103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 156 - 211
Target Start/End: Complemental strand, 6946 - 6891
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatga 211  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| ||| |||||||    
T  6946 atttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatga 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 9712 - 9774
Alignment:
Q  156 atttgagtttatctactaacataaacacttatgagattgtttggaagaacttatgaaaacaac 218  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||| ||| | |||| |||||||    
T  9712 atttgagtttatctactaacataaatacttgtgagactgtttgggagagcctatggaaacaac 9774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 4942 - 4991
Alignment:
Q  230 ttcataagttgttttcagcttaatttcataagctctccaagacagcttat 279  Q
    ||||||||||||||||||||||| | |||||||||||||||  |||||||    
T  4942 ttcataagttgttttcagcttaactccataagctctccaaggtagcttat 4991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 53758 - 53823
Alignment:
Q  139 cctgtttgaattggttcatttgagtttatctactaacataaacacttatgagattgtttggaagaa 204  Q
    |||||||| |||| ||||||||  |||||||| || ||||||||||  ||||||||||||||||||    
T  53758 cctgtttggattgattcatttggttttatctagtagcataaacactgttgagattgtttggaagaa 53823  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 306387 - 306329
Alignment:
Q  232 cataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaactt 290  Q
    |||||| ||||||||||||| || ||||||||||| | || ||||||| ||||||||||    
T  306387 cataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaactt 306329  T

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