View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2481_high_5 (Length: 313)
Name: NF2481_high_5
Description: NF2481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2481_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 30 - 297
Target Start/End: Complemental strand, 37162406 - 37162140
Alignment:
| Q |
30 |
cttcgaaagttatattaaaatatattcaaaggtttataaattgctccgccaactaatatttaagtcctcctttagttgtttggtaatagttcataaacta |
129 |
Q |
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| T |
37162406 |
cttcgaaagttatattaaaatatattcaaatgtttataaattactccgccaactaatattta-gtcctcctttagttgtttggtaatagatcataaacta |
37162308 |
T |
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| Q |
130 |
ttaaaatacatcaatatattctcaaaattactataaaacaaacaataatcgagtccttgataagagaaacaataattgtgtctctcaaccttagaaaact |
229 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
37162307 |
ttaaaatacatcaatatattctcaaaattactataaaacaaacaataatcgagtccttgataagagaaacaataattgtgtctctcaacattagaaaact |
37162208 |
T |
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| Q |
230 |
ttttgttatttatcctcattctcatatttatcacgtggtattgatattcttccactcaaaaaagaagc |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37162207 |
ttttgttatttatcctcattctcatatttatcacgtggtagtgatattcttccactcaaaaaagaagc |
37162140 |
T |
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