View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2481_low_6 (Length: 324)
Name: NF2481_low_6
Description: NF2481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2481_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 12 - 309
Target Start/End: Complemental strand, 13854352 - 13854055
Alignment:
| Q |
12 |
atgaattgcaagtgctacatagattatcactgattgaagttgattgtaacttagtataatacattatcatacagtgatgcacttttctctcaaaactcca |
111 |
Q |
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| T |
13854352 |
atgaattgcaagtgctacatagattatcactgattgaagttgattgtaacttagtataatacattatcatacaatgatgcacttttctctcaaaactccg |
13854253 |
T |
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| Q |
112 |
attcaaataaatgcttttaactagattattttgtcaatgcttaaagtacctagattttctgacaaaataatgaaaaagatcagtaaggtgctagcctgta |
211 |
Q |
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| T |
13854252 |
attcaaataaatgcttttaactagattattttgtcaatgcttaaagtacctagattttctgacaaaataatgaaaaagatcagtaaggtgctagcctgta |
13854153 |
T |
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| Q |
212 |
atataacttcatatatgtttgaactctatataatattagcttctatcttatgttgataattgatgtttgttatgaaatcagaaacctggcggtgttat |
309 |
Q |
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| T |
13854152 |
atataacttcatatatgtttgaactctatataatactagcttctatcttatgttgataattgatgtttgttatgaaatcagaaacctggcggtgttat |
13854055 |
T |
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