View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2481_low_9 (Length: 264)
Name: NF2481_low_9
Description: NF2481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2481_low_9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 34105687 - 34105439
Alignment:
| Q |
16 |
atgaggattcttcaacttgggatctaaagtgatgataaaggatgaaagtctcccaggtagattggcattgatgaagtcattgaagaaaatcccctaggtt |
115 |
Q |
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| T |
34105687 |
atgaggattcttcaacttgggatctaaagtgatgataaaggatgaaagtctcctaggtagattggcattgatgaagtcattgaagaaaatcccctaggtt |
34105588 |
T |
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| Q |
116 |
tcaaaaagatttgatgaaagtaaagttacacttatttaacccctacaattgtattccatgcataagacatcacacccatttcttcaaagtaaaaggagca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |
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| T |
34105587 |
tcaaaaagatttgatgaaagtaaagttacacttatttaacccctacaattttattccctgcataagacatcacacctatttcttcaaagtaaaaggagca |
34105488 |
T |
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| Q |
216 |
tccagtactcgtttagaaacaaagacaccaaaggaaaagacatcacagt |
264 |
Q |
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| T |
34105487 |
tccagtactcgtttagaaacaaagacaccaaaggaaaagacatcacagt |
34105439 |
T |
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