View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2482_high_1 (Length: 485)

Name: NF2482_high_1
Description: NF2482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2482_high_1
NF2482_high_1
[»] chr4 (45 HSPs)
chr4 (210-471)||(51793238-51793493)
chr4 (39-141)||(42274491-42274595)
chr4 (39-141)||(23928567-23928670)
chr4 (31-141)||(18417725-18417837)
chr4 (39-141)||(24915793-24915897)
chr4 (39-140)||(21048704-21048807)
chr4 (38-141)||(1298980-1299085)
chr4 (35-202)||(35360690-35360851)
chr4 (39-141)||(530668-530772)
chr4 (44-141)||(24969545-24969644)
chr4 (44-141)||(32318724-32318823)
chr4 (39-141)||(4552853-4552957)
chr4 (39-137)||(9355552-9355652)
chr4 (44-141)||(20435144-20435243)
chr4 (39-141)||(13204445-13204549)
chr4 (39-141)||(55107592-55107696)
chr4 (44-141)||(27434678-27434777)
chr4 (39-106)||(43486199-43486266)
chr4 (44-141)||(55049404-55049503)
chr4 (44-109)||(4688251-4688316)
chr4 (45-109)||(24294569-24294636)
chr4 (35-141)||(28809841-28809950)
chr4 (44-93)||(42274611-42274660)
chr4 (35-93)||(3422547-3422605)
chr4 (35-93)||(4688366-4688424)
chr4 (40-106)||(16995555-16995620)
chr4 (39-93)||(52824238-52824292)
chr4 (44-93)||(530787-530836)
chr4 (44-93)||(18417661-18417710)
chr4 (39-93)||(1298911-1298965)
chr4 (43-109)||(2272468-2272534)
chr4 (39-93)||(20435258-20435312)
chr4 (44-93)||(24969662-24969711)
chr4 (38-140)||(3422427-3422531)
chr4 (44-99)||(36030943-36030998)
chr4 (38-91)||(28809967-28810020)
chr4 (44-93)||(37525061-37525110)
chr4 (44-93)||(55107528-55107577)
chr4 (39-79)||(52824346-52824386)
chr4 (39-93)||(4552784-4552838)
chr4 (35-93)||(13204372-13204430)
chr4 (74-138)||(56552132-56552198)
chr4 (44-93)||(23928685-23928734)
chr4 (36-93)||(27434606-27434663)
chr4 (44-93)||(42020208-42020257)
[»] chr8 (35 HSPs)
chr8 (37-141)||(38629542-38629648)
chr8 (39-139)||(24741822-24741924)
chr8 (44-141)||(40891081-40891180)
chr8 (44-141)||(37114306-37114405)
chr8 (39-141)||(17426627-17426731)
chr8 (36-141)||(8210391-8210498)
chr8 (39-106)||(15882306-15882373)
chr8 (39-109)||(12234569-12234639)
chr8 (39-107)||(35467274-35467342)
chr8 (39-141)||(38520086-38520190)
chr8 (43-106)||(14834675-14834738)
chr8 (44-141)||(29780963-29781062)
chr8 (56-140)||(11828612-11828698)
chr8 (53-139)||(4261989-4262077)
chr8 (31-94)||(8210314-8210377)
chr8 (39-109)||(23940803-23940873)
chr8 (39-109)||(24211277-24211347)
chr8 (39-93)||(29781077-29781131)
chr8 (36-106)||(33940713-33940782)
chr8 (39-93)||(15882199-15882253)
chr8 (44-140)||(33100649-33100747)
chr8 (35-88)||(24211401-24211454)
chr8 (44-93)||(37114242-37114291)
chr8 (37-93)||(17426748-17426804)
chr8 (34-93)||(4035735-4035794)
chr8 (39-93)||(38520017-38520071)
chr8 (36-141)||(40393791-40393897)
chr8 (44-93)||(23940923-23940972)
chr8 (41-106)||(38405244-38405308)
chr8 (38-93)||(11828721-11828776)
chr8 (44-129)||(38515584-38515671)
chr8 (38-93)||(38629472-38629527)
chr8 (39-93)||(12234465-12234519)
chr8 (39-93)||(35467170-35467224)
chr8 (44-93)||(33100763-33100812)
[»] chr1 (68 HSPs)
chr1 (44-141)||(14387019-14387118)
chr1 (44-141)||(5189537-5189636)
chr1 (36-141)||(27240920-27241027)
chr1 (34-139)||(40647188-40647295)
chr1 (38-141)||(49284292-49284397)
chr1 (39-141)||(2854531-2854635)
chr1 (39-141)||(19954910-19955014)
chr1 (39-141)||(23698501-23698605)
chr1 (39-141)||(47940569-47940673)
chr1 (39-109)||(51789596-51789666)
chr1 (37-128)||(36880592-36880685)
chr1 (31-141)||(48954205-48954317)
chr1 (39-140)||(957658-957761)
chr1 (36-107)||(42561291-42561362)
chr1 (44-141)||(27926255-27926353)
chr1 (41-141)||(27928299-27928400)
chr1 (36-93)||(50627127-50627184)
chr1 (34-141)||(50856315-50856424)
chr1 (39-141)||(50627199-50627303)
chr1 (44-141)||(1387846-1387945)
chr1 (38-93)||(4299513-4299568)
chr1 (44-141)||(9978055-9978154)
chr1 (44-141)||(15324695-15324794)
chr1 (39-101)||(21930488-21930550)
chr1 (39-93)||(47940689-47940743)
chr1 (44-93)||(14387133-14387182)
chr1 (71-141)||(6079452-6079524)
chr1 (44-92)||(25297966-25298014)
chr1 (39-141)||(26208493-26208597)
chr1 (44-141)||(3607733-3607832)
chr1 (31-93)||(5189459-5189522)
chr1 (38-93)||(19797099-19797154)
chr1 (39-93)||(49285093-49285147)
chr1 (39-93)||(51789713-51789767)
chr1 (71-202)||(4299423-4299552)
chr1 (44-93)||(9978170-9978219)
chr1 (44-93)||(27928416-27928465)
chr1 (36-93)||(48954332-48954389)
chr1 (38-141)||(50162536-50162641)
chr1 (44-139)||(51276699-51276796)
chr1 (39-107)||(362461-362529)
chr1 (38-93)||(2854650-2854705)
chr1 (44-141)||(19796985-19797084)
chr1 (44-106)||(2125074-2125136)
chr1 (39-93)||(3607847-3607901)
chr1 (39-93)||(15324625-15324679)
chr1 (41-107)||(22338985-22339051)
chr1 (55-139)||(27670213-27670299)
chr1 (36-98)||(29598450-29598512)
chr1 (39-93)||(42561413-42561467)
chr1 (44-93)||(6079388-6079437)
chr1 (44-93)||(23698620-23698669)
chr1 (44-93)||(27926370-27926419)
chr1 (44-93)||(50162657-50162706)
chr1 (54-93)||(21930394-21930433)
chr1 (40-107)||(28431702-28431769)
chr1 (39-93)||(46691211-46691266)
chr1 (39-93)||(19955029-19955083)
chr1 (39-93)||(27241042-27241096)
chr1 (39-97)||(28244066-28244124)
chr1 (44-93)||(40647120-40647169)
chr1 (44-93)||(51276813-51276862)
chr1 (33-109)||(36007813-36007889)
chr1 (39-93)||(2125188-2125242)
chr1 (39-93)||(28447991-28448045)
chr1 (39-93)||(36880288-36880342)
chr1 (44-93)||(22339102-22339151)
chr1 (44-88)||(16518424-16518468)
[»] chr7 (48 HSPs)
chr7 (35-141)||(39617836-39617944)
chr7 (44-141)||(24836088-24836187)
chr7 (48-141)||(30594761-30594856)
chr7 (44-141)||(20184242-20184341)
chr7 (37-141)||(30259063-30259169)
chr7 (44-139)||(31231618-31231715)
chr7 (39-141)||(34052347-34052451)
chr7 (39-141)||(35339277-35339381)
chr7 (44-141)||(38883289-38883388)
chr7 (44-141)||(45997512-45997611)
chr7 (35-93)||(38883216-38883274)
chr7 (39-141)||(3953041-3953145)
chr7 (35-141)||(12142261-12142369)
chr7 (42-109)||(29277939-29278006)
chr7 (44-109)||(10936474-10936539)
chr7 (36-93)||(10936588-10936645)
chr7 (44-109)||(39143716-39143781)
chr7 (39-140)||(33749713-33749815)
chr7 (39-93)||(31231734-31231788)
chr7 (53-141)||(31521538-31521628)
chr7 (36-106)||(35665629-35665699)
chr7 (39-93)||(38528530-38528584)
chr7 (44-109)||(9285718-9285783)
chr7 (44-109)||(9289785-9289850)
chr7 (39-92)||(33721826-33721879)
chr7 (39-140)||(40358184-40358290)
chr7 (38-97)||(25742433-25742492)
chr7 (44-91)||(39143826-39143873)
chr7 (39-93)||(20184357-20184411)
chr7 (35-93)||(34052274-34052332)
chr7 (39-93)||(48103367-48103421)
chr7 (44-109)||(10398421-10398486)
chr7 (44-93)||(35665734-35665783)
chr7 (44-109)||(37093870-37093935)
chr7 (39-93)||(24836019-24836073)
chr7 (39-93)||(30259184-30259238)
chr7 (39-93)||(30594692-30594746)
chr7 (39-93)||(47237546-47237600)
chr7 (44-93)||(38528394-38528443)
chr7 (48-88)||(11486872-11486912)
chr7 (36-95)||(47237429-47237487)
chr7 (39-85)||(17101653-17101699)
chr7 (39-93)||(45997626-45997680)
chr7 (44-93)||(12142196-12142245)
chr7 (44-85)||(17101700-17101741)
chr7 (44-93)||(29277842-29277891)
chr7 (44-93)||(35339396-35339445)
chr7 (44-96)||(48103480-48103532)
[»] chr3 (83 HSPs)
chr3 (39-141)||(21969156-21969260)
chr3 (39-141)||(21991592-21991696)
chr3 (32-141)||(36278748-36278859)
chr3 (37-141)||(3970488-3970594)
chr3 (36-109)||(45487901-45487974)
chr3 (31-141)||(26906522-26906634)
chr3 (44-141)||(13078167-13078266)
chr3 (37-141)||(4072270-4072376)
chr3 (39-141)||(25446318-25446421)
chr3 (39-141)||(50099502-50099606)
chr3 (44-141)||(12838145-12838244)
chr3 (44-141)||(32237398-32237497)
chr3 (36-141)||(35368801-35368908)
chr3 (37-140)||(36657430-36657535)
chr3 (34-141)||(36822754-36822863)
chr3 (44-141)||(8831809-8831908)
chr3 (44-141)||(22101233-22101332)
chr3 (41-109)||(1476552-1476620)
chr3 (44-141)||(404113-404211)
chr3 (44-141)||(10254637-10254736)
chr3 (44-141)||(22176177-22176276)
chr3 (39-106)||(46222027-46222094)
chr3 (39-93)||(4072392-4072446)
chr3 (39-93)||(12789605-12789659)
chr3 (36-140)||(26977759-26977865)
chr3 (39-93)||(36657551-36657605)
chr3 (39-109)||(39850343-39850413)
chr3 (36-93)||(21969275-21969332)
chr3 (36-93)||(21991711-21991768)
chr3 (39-107)||(25561115-25561183)
chr3 (39-141)||(43639080-43639184)
chr3 (39-141)||(55340292-55340396)
chr3 (48-107)||(25488349-25488408)
chr3 (44-141)||(45712907-45713006)
chr3 (39-97)||(10117625-10117683)
chr3 (39-109)||(12789708-12789778)
chr3 (39-93)||(38125297-38125351)
chr3 (39-93)||(45487798-45487852)
chr3 (36-93)||(26906450-26906507)
chr3 (37-93)||(32237512-32237568)
chr3 (37-93)||(39850463-39850519)
chr3 (39-141)||(46679329-46679433)
chr3 (44-107)||(13723992-13724054)
chr3 (38-93)||(25488459-25488514)
chr3 (38-93)||(25561009-25561064)
chr3 (39-106)||(42105382-42105449)
chr3 (39-93)||(1476669-1476723)
chr3 (43-93)||(8831743-8831793)
chr3 (39-93)||(35368548-35368602)
chr3 (31-93)||(36278874-36278936)
chr3 (43-139)||(49984001-49984099)
chr3 (42-95)||(297539-297592)
chr3 (44-93)||(5529895-5529944)
chr3 (44-93)||(10017118-10017167)
chr3 (44-93)||(10254572-10254621)
chr3 (44-93)||(26976960-26977009)
chr3 (36-93)||(37506244-37506301)
chr3 (44-93)||(43639200-43639249)
chr3 (44-93)||(45713021-45713070)
chr3 (39-141)||(10441257-10441361)
chr3 (39-107)||(44611381-44611448)
chr3 (39-140)||(26976841-26976944)
chr3 (39-93)||(3970609-3970663)
chr3 (39-93)||(10441376-10441430)
chr3 (39-93)||(13724106-13724160)
chr3 (59-93)||(20366705-20366739)
chr3 (37-141)||(43150548-43150652)
chr3 (47-93)||(44611499-44611545)
chr3 (44-93)||(10117519-10117568)
chr3 (44-93)||(12838081-12838130)
chr3 (44-93)||(32362865-32362914)
chr3 (44-93)||(36822878-36822927)
chr3 (44-93)||(55340412-55340461)
chr3 (44-88)||(10017232-10017276)
chr3 (31-141)||(44920638-44920749)
chr3 (34-93)||(13078281-13078340)
chr3 (38-93)||(25446249-25446302)
chr3 (38-96)||(36329186-36329244)
chr3 (31-93)||(44920764-44920825)
chr3 (39-93)||(46664175-46664229)
chr3 (44-93)||(42105501-42105550)
chr3 (44-93)||(43150484-43150533)
chr3 (37-93)||(36329298-36329354)
[»] chr5 (49 HSPs)
chr5 (39-140)||(20476500-20476603)
chr5 (40-140)||(32623215-32623317)
chr5 (44-204)||(12744839-12744993)
chr5 (39-107)||(4266086-4266154)
chr5 (35-140)||(15855912-15856019)
chr5 (38-93)||(16472953-16473008)
chr5 (39-140)||(35420611-35420714)
chr5 (44-140)||(12807980-12808078)
chr5 (39-109)||(13754290-13754360)
chr5 (44-140)||(16473024-16473122)
chr5 (31-109)||(21591204-21591282)
chr5 (31-109)||(21595321-21595399)
chr5 (39-141)||(1138627-1138731)
chr5 (39-141)||(33629344-33629448)
chr5 (39-141)||(43539175-43539279)
chr5 (39-106)||(10132359-10132426)
chr5 (39-93)||(15855842-15855896)
chr5 (39-93)||(35420730-35420784)
chr5 (39-93)||(4265981-4266035)
chr5 (39-93)||(33629465-33629519)
chr5 (44-109)||(2268707-2268772)
chr5 (41-102)||(4913258-4913319)
chr5 (44-93)||(24397364-24397413)
chr5 (39-141)||(21259729-21259833)
chr5 (44-141)||(19976330-19976429)
chr5 (38-88)||(780915-780965)
chr5 (39-93)||(20476430-20476484)
chr5 (52-109)||(2529083-2529140)
chr5 (44-93)||(8364748-8364797)
chr5 (54-141)||(21262011-21262100)
chr5 (42-106)||(35807040-35807104)
chr5 (38-93)||(1138557-1138612)
chr5 (39-109)||(780793-780863)
chr5 (44-94)||(10304773-10304823)
chr5 (39-109)||(37552307-37552377)
chr5 (44-93)||(1164914-1164963)
chr5 (44-93)||(2255580-2255629)
chr5 (44-93)||(13754409-13754458)
chr5 (36-93)||(21259848-21259905)
chr5 (39-88)||(29141804-29141853)
chr5 (33-93)||(12807905-12807964)
chr5 (76-141)||(24397282-24397348)
chr5 (44-93)||(2268176-2268225)
chr5 (67-96)||(18236583-18236612)
chr5 (78-106)||(8364668-8364696)
chr5 (60-92)||(10499947-10499979)
chr5 (39-83)||(17583367-17583411)
chr5 (44-92)||(25751570-25751618)
chr5 (33-93)||(35806928-35806988)
[»] chr2 (45 HSPs)
chr2 (36-141)||(43476014-43476121)
chr2 (39-141)||(7737133-7737237)
chr2 (44-141)||(2818734-2818833)
chr2 (44-202)||(45408639-45408792)
chr2 (39-141)||(1923979-1924083)
chr2 (39-141)||(24101831-24101935)
chr2 (39-141)||(42713776-42713880)
chr2 (44-106)||(10552986-10553048)
chr2 (39-141)||(27920640-27920744)
chr2 (39-140)||(9933569-9933671)
chr2 (35-93)||(1924099-1924157)
chr2 (38-141)||(22269790-22269895)
chr2 (38-141)||(34490524-34490629)
chr2 (39-141)||(3116944-3117048)
chr2 (39-107)||(7116474-7116542)
chr2 (44-141)||(16705801-16705900)
chr2 (39-106)||(40362587-40362654)
chr2 (36-93)||(34490452-34490509)
chr2 (44-141)||(9281351-9281450)
chr2 (44-141)||(12850546-12850645)
chr2 (39-93)||(16705732-16705786)
chr2 (39-93)||(45408624-45408678)
chr2 (39-141)||(6605803-6605906)
chr2 (37-93)||(9281465-9281521)
chr2 (39-141)||(29229360-29229467)
chr2 (39-141)||(29342660-29342767)
chr2 (71-140)||(9850789-9850860)
chr2 (43-94)||(17434798-17434848)
chr2 (38-93)||(23835874-23835929)
chr2 (39-93)||(20892883-20892937)
chr2 (39-97)||(43858548-43858606)
chr2 (44-93)||(12850660-12850709)
chr2 (44-93)||(22269726-22269775)
chr2 (44-93)||(24101950-24101999)
chr2 (44-93)||(34455889-34455938)
chr2 (45-93)||(2818671-2818719)
chr2 (38-93)||(3116874-3116929)
chr2 (48-106)||(17434704-17434763)
chr2 (39-98)||(17500005-17500064)
chr2 (44-141)||(34455953-34456052)
chr2 (39-93)||(9933687-9933741)
chr2 (44-93)||(7116374-7116423)
chr2 (71-141)||(23835945-23836017)
chr2 (44-93)||(7737068-7737117)
chr2 (44-93)||(9850875-9850920)
[»] chr6 (35 HSPs)
chr6 (33-141)||(4890473-4890583)
chr6 (36-171)||(14393602-14393739)
chr6 (36-109)||(21379937-21380010)
chr6 (36-141)||(13439764-13439871)
chr6 (39-141)||(8091130-8091234)
chr6 (39-141)||(15546700-15546804)
chr6 (38-140)||(11687141-11687245)
chr6 (43-137)||(29609073-29609169)
chr6 (36-141)||(885453-885560)
chr6 (44-140)||(18998121-18998218)
chr6 (39-141)||(13172573-13172676)
chr6 (44-141)||(7808677-7808776)
chr6 (35-93)||(11687261-11687319)
chr6 (39-93)||(15546631-15546685)
chr6 (39-93)||(21380059-21380113)
chr6 (36-93)||(885381-885438)
chr6 (44-93)||(20501710-20501759)
chr6 (49-109)||(3369087-3369147)
chr6 (45-141)||(4238922-4239020)
chr6 (39-93)||(4890599-4890653)
chr6 (39-97)||(6433689-6433747)
chr6 (44-93)||(7808613-7808662)
chr6 (62-109)||(6433759-6433806)
chr6 (38-107)||(17279631-17279697)
chr6 (40-107)||(20501810-20501876)
chr6 (42-93)||(31764443-31764494)
chr6 (39-93)||(4179144-4179197)
chr6 (44-93)||(3368989-3369038)
chr6 (44-93)||(8091066-8091115)
chr6 (38-93)||(29608999-29609054)
chr6 (39-93)||(13439694-13439748)
chr6 (68-106)||(31764353-31764391)
chr6 (44-93)||(4076637-4076685)
chr6 (44-93)||(18998235-18998284)
chr6 (53-93)||(14393574-14393614)
[»] scaffold0086 (1 HSPs)
scaffold0086 (35-141)||(48194-48302)
[»] scaffold0122 (2 HSPs)
scaffold0122 (44-141)||(45902-46001)
scaffold0122 (39-93)||(45833-45887)
[»] scaffold0188 (2 HSPs)
scaffold0188 (38-141)||(7154-7259)
scaffold0188 (35-93)||(7081-7139)
[»] scaffold0595 (2 HSPs)
scaffold0595 (39-109)||(5807-5879)
scaffold0595 (37-93)||(5698-5754)
[»] scaffold0107 (2 HSPs)
scaffold0107 (39-141)||(51131-51235)
scaffold0107 (39-93)||(51062-51116)
[»] scaffold0653 (1 HSPs)
scaffold0653 (44-109)||(3397-3462)
[»] scaffold0118 (2 HSPs)
scaffold0118 (44-101)||(14552-14609)
scaffold0118 (39-93)||(14441-14495)
[»] scaffold0006 (1 HSPs)
scaffold0006 (46-106)||(72294-72354)
[»] scaffold0163 (2 HSPs)
scaffold0163 (39-140)||(1938-2041)
scaffold0163 (35-93)||(2058-2116)
[»] scaffold0069 (1 HSPs)
scaffold0069 (39-93)||(26404-26458)
[»] scaffold0137 (2 HSPs)
scaffold0137 (44-93)||(10120-10169)
scaffold0137 (39-141)||(10183-10287)
[»] scaffold0018 (1 HSPs)
scaffold0018 (50-122)||(138287-138360)
[»] scaffold0013 (1 HSPs)
scaffold0013 (40-106)||(94277-94337)
[»] scaffold0004 (1 HSPs)
scaffold0004 (77-109)||(90738-90770)


Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 210 - 471
Target Start/End: Complemental strand, 51793493 - 51793238
Alignment:
Q  210 taaattttatactatcacacagaatagaacataatgagttggagcggaaaatagcaaaatgtaatgatcaatatgcctgagcatatcaatatgataggtg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||    
T  51793493 taaattttatactatcacacagaatagaacataatgagttggagcggaaaatagcaaaatgtaatgatcaatatgcctgagcatat------gataggtg 51793400  T
Q  310 tacatgcacatgggtttgtccatatttgcccaccaaaatagtcataagtgacgacaaattaaattaaatttaattgagttgggtttcgttaattcttctt 409  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51793399 tacatgcacatgggtttgtccatatttgcccaccaaaatagtaataagtgacgacaaattaaattaaatttaattgagttgggtttcgttaattcttctt 51793300  T
Q  410 taatcttgtatgtctttaaaattacatgaattatagattatagacatatctttgatcaaatt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51793299 taatcttgtatgtctttaaaattacatgaattatagattatagacatatctttgatcaaatt 51793238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 42274491 - 42274595
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| |||    
T  42274491 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 42274590  T
Q  137 tatcc 141  Q
    |||||    
T  42274591 tatcc 42274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 23928567 - 23928670
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||||||| |||    
T  23928567 aggagaaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgtta 23928665  T
Q  137 tatcc 141  Q
    |||||    
T  23928666 tatcc 23928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 18417837 - 18417725
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaa 128  Q
    |||||| ||||| ||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||    
T  18417837 taaattataggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaa 18417738  T
Q  129 atttattatatcc 141  Q
     ||| ||||||||    
T  18417737 gtttgttatatcc 18417725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 24915793 - 24915897
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||| |||    
T  24915793 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 24915892  T
Q  137 tatcc 141  Q
    |||||    
T  24915893 tatcc 24915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 21048704 - 21048807
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| || ||| |||    
T  21048704 aggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgtta 21048803  T
Q  137 tatc 140  Q
    ||||    
T  21048804 tatc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 1299085 - 1298980
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||| ||    
T  1299085 taggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtt 1298986  T
Q  136 atatcc 141  Q
    ||||||    
T  1298985 atatcc 1298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 35360851 - 35360690
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaattt 132  Q
    |||||||| ||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |||    
T  35360851 ttttaggagaaaacttag-tacaattttttagttgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagttt 35360753  T
Q  133 attatatccnnnnnnnnntatgtatttttagttaagaattaaccatacaaaaaacacctaataaattgta 202  Q
     |||||||          ||||||||||||||||||    |||||||| ||||| |||||||||||||||    
T  35360752 gttatatc---taaaaaatatgtatttttagttaag----aaccatacgaaaaatacctaataaattgta 35360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 530668 - 530772
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||| |||    
T  530668 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgtta 530767  T
Q  137 tatcc 141  Q
    |||||    
T  530768 tatcc 530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 24969545 - 24969644
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||||| ||| ||||||||    
T  24969545 aaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 24969644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 32318724 - 32318823
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||||| ||| ||||||||    
T  32318724 aaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttatatcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 4552957 - 4552853
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||| ||| |||  |||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||| |||    
T  4552957 aggagaaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgtta 4552858  T
Q  137 tatcc 141  Q
    |||||    
T  4552857 tatcc 4552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 137
Target Start/End: Original strand, 9355552 - 9355652
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    ||||||||||||  |||||||||||||| || ||||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||| ||||| |||    
T  9355552 aggaaaaaacttccgtacaattccttaggtgcttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgtta 9355651  T
Q  137 t 137  Q
    |    
T  9355652 t 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 20435144 - 20435243
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||| || ||| ||||||||    
T  20435144 aaaacttatatacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttatatcc 20435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 13204549 - 13204445
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||  |  ||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||| |||| ||| |||    
T  13204549 aggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtta 13204450  T
Q  137 tatcc 141  Q
    |||||    
T  13204449 tatcc 13204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 55107696 - 55107592
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||| |||||||| ||||||||||||| |||  ||| ||||||||||| ||| |||    
T  55107696 aggagaaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgtta 55107597  T
Q  137 tatcc 141  Q
    |||||    
T  55107596 tatcc 55107592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 27434777 - 27434678
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||| ||||||| |||  ||| ||||||||||| ||| ||||||||    
T  27434777 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttatatcc 27434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 43486199 - 43486266
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||| ||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  43486199 aggagaaaacttaggtacaattccttaggtacttttcctatggttcttaactaaattcaccatgattt 43486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 55049404 - 55049503
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||| |||||||||||||| || ||||||||| |||||||||||||||||| |||||||||| ||| |||| ||||| ||||| ||| ||||||||    
T  55049404 aaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgttatatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 4688251 - 4688316
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||  |||||||||    
T  4688251 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcactgtgatttcct 4688316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 24294636 - 24294569
Alignment:
Q  45 aaacttaggtacaattccttagatg---tttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||||||| ||   |||||||||||||||||||||||||||||||| |||||||    
T  24294636 aaacttaggtacaattccttaggtggtgtttttcgtatggttcttaactaaattcaccataatttcct 24294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 28809841 - 28809950
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa-ttcaccatgatttcct-aaagccat-attttctcaaaatt 131  Q
    |||||||| ||||||||||||||||| ||||| || |||| |||| ||| ||||||||| ||||||||||||| || ||| |||| ||||||||||||||    
T  28809841 ttttaggagaaaacttaggtacaatttcttaggtgcttttggtattgtttttaactaaatttcaccatgattttctcaaatccataattttctcaaaatt 28809940  T
Q  132 tattatatcc 141  Q
    | ||||||||    
T  28809941 tgttatatcc 28809950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 42274660 - 42274611
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42274660 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 42274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 3422605 - 3422547
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  3422605 ttttaggacaaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 3422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 4688424 - 4688366
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| || |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  4688424 ttttaagagaaaacttaggtacaattccttagatgattttcgtatggttcttaattaaa 4688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 16995555 - 16995620
Alignment:
Q  40 ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||| |||||||| ||||||||    
T  16995555 ggaaaaaacttaggtacaattccttgg-tgtttttcgtatggtttttaattaaattcaacatgattt 16995620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 52824238 - 52824292
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  52824238 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 530836 - 530787
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  530836 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 18417661 - 18417710
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  18417661 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 1298911 - 1298965
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  1298911 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 1298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 2272534 - 2272468
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||| || |||||||||| |||  || ||||||||||||||||| |||||||||||||||||||||    
T  2272534 aaaaaatttggtacaattcattatgtgcttttcgtatggttcttagctaaattcaccatgatttcct 2272468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 20435312 - 20435258
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| |||| || |||||||||||||||||||||||    
T  20435312 aggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 20435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 24969711 - 24969662
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  24969711 aaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaa 24969662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 3422427 - 3422531
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| ||||||||||||||||| ||||| || ||||||||| |||||||| |||||| |  ||||||| || ||| |||| ||||||||||| ||||||    
T  3422427 taggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttatt 3422526  T
Q  136 atatc 140  Q
     ||||    
T  3422527 gtatc 3422531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 36030943 - 36030998
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcacc 99  Q
    |||| |||||||||||||||||  || |||||||||| ||||||||||||||||||    
T  36030943 aaaagttaggtacaattccttacgtgcttttcgtatgtttcttaactaaattcacc 36030998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 28810020 - 28809967
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaacta 91  Q
    ||||| ||||||||||||||||| ||||| || |||| ||||||||||||||||    
T  28810020 taggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaacta 28809967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 37525110 - 37525061
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||| |||| || ||||||| |||||||||||||||    
T  37525110 aaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 37525061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 55107528 - 55107577
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||  || ||||| |||||||||||||||||    
T  55107528 aaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaa 55107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 52824386 - 52824346
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtat 79  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  52824386 aggagaaaacttaggtagaattccttagatgtttttcgtat 52824346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 4552784 - 4552838
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||  || ||||| ||||||| |||||||||    
T  4552784 aggagaaaacttaggtacaattccttaagtgcttttcatatggtttttaactaaa 4552838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 13204372 - 13204430
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| ||||||||| ||||||| ||||| |  |||| ||||||||||||||||||    
T  13204372 ttttaggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 56552198 - 56552132
Alignment:
Q  74 tcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattata 138  Q
    ||||||||||||||| |||||| ||||||||||||| ||| |||| ||||||||||| ||| |||||    
T  56552198 tcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 23928734 - 23928685
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||| || ||| |||||| ||||||||||||    
T  23928734 aaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaa 23928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 27434606 - 27434663
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||| ||||  || |||| |||| |||||||||||||    
T  27434606 tttaggagaaaacttaggtacaatttcttatgtgctttttgtatagttcttaactaaa 27434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 42020257 - 42020208
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||  |||||  |||| ||||||||||||||||||    
T  42020257 aaaacttaggtacaattctctagatactttttgtatggttcttaactaaa 42020208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 38629648 - 38629542
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttat 134  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||||| |||||    
T  38629648 ttaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttat 38629549  T
Q  135 tatatcc 141  Q
    |||||||    
T  38629548 tatatcc 38629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 139
Target Start/End: Original strand, 24741822 - 24741924
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| | |||||||    
T  24741822 aggaaaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttatta 24741921  T
Q  137 tat 139  Q
    |||    
T  24741922 tat 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 40891180 - 40891081
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  40891180 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 40891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 37114405 - 37114306
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatga-tttcctaaagccat-attttctcaaaatttattatatcc 141  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||| |||| ||||||||||| ||||||||||||    
T  37114405 aaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatatcc 37114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 17426627 - 17426731
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| ||| |||    
T  17426627 aggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgtta 17426726  T
Q  137 tatcc 141  Q
    |||||    
T  17426727 tatcc 17426731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 8210498 - 8210391
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||| ||| |||| ||||||||||| |||     
T  8210498 tttaggagaaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttg 8210399  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  8210398 ttatatcc 8210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 15882373 - 15882306
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  15882373 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 15882306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 12234639 - 12234569
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  12234639 aggagaaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatgatttcct 12234569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 35467342 - 35467274
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||||||||||| |||||||||||||  || ||||||||||||||||||||||||||| |||||||||    
T  35467342 aggaaaaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttc 35467274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 38520190 - 38520086
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||  || |||||||||| || ||||||||||||||||||||||||| |||  ||| ||||||||||| ||| |||    
T  38520190 aggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgtta 38520091  T
Q  137 tatcc 141  Q
    |||||    
T  38520090 tatcc 38520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 14834675 - 14834738
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||||| |||||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  14834675 aaaaacttacgtacaattccttacgtgcttttcgtatggttcttaactaaattcaccatgattt 14834738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 29780963 - 29781062
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| || ||||||||||||| ||||||||||| ||||| ||||||| ||| |||| ||||||||||| ||| ||||||||    
T  29780963 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgttatatcc 29781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 11828612 - 11828698
Alignment:
Q  56 caattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagcca-tattttctcaaaatttattatatc 140  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||| ||| |||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 4261989 - 4262077
Alignment:
Q  53 gtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcctaaag-ccat-attttctcaaaatttattatat 139  Q
    ||||||||| |||| || |||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||| ||||||    
T  4261989 gtacaattctttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 8210314 - 8210377
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaat 94  Q
    ||||| |||||| ||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  8210314 taaatattaggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 23940803 - 23940873
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||| ||||||||| ||||  || |||||||||| ||||||||||||||||||||||||||||    
T  23940803 aggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcct 23940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 24211277 - 24211347
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| |||||||||||||||||| |||| || |||||||||||||||||| |||||||||| | |||||||    
T  24211277 aggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaattcaccgtaatttcct 24211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 29781131 - 29781077
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  29781131 aggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaa 29781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 33940782 - 33940713
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||||||||||||| ||||||||||||| ||||| ||  |||||||||||||||||| ||||||||||    
T  33940782 tttaggaaaaaacttag-tacaattccttaggtgtttgtcacatggttcttaactaaatttaccatgattt 33940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 15882199 - 15882253
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  15882199 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 15882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 33100649 - 33100747
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatc 140  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||   ||| | ||||||| ||| |||| ||||||||||| ||| |||||||    
T  33100649 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgttatatc 33100747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 24211454 - 24211401
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    |||| ||| ||||||||||||||||||||||| || ||||||||||||||||||    
T  24211454 tttttggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 37114242 - 37114291
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  37114242 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 17426804 - 17426748
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| |||||||||||||||||  |||| || |||||||||||||||||||||||    
T  17426804 ttaggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 17426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 4035735 - 4035794
Alignment:
Q  34 attttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| |||||||||||||| ||||| || || |||||||||||| ||||||||||    
T  4035735 attttaggagaaaacttaggtacagttcctcaggtgcttttcgtatggtacttaactaaa 4035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 38520017 - 38520071
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| ||||||| |||||||||| || |||||||||||||||||||||||    
T  38520017 aggagaaaatttaggtataattccttagttgcttttcgtatggttcttaactaaa 38520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 40393897 - 40393791
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccatattttctcaaaatttat 134  Q
    ||||||| |||||||| | |||||| ||||| || ||||  ||||||||||| ||||||||||||| ||||||| |||     ||||||||||||||| |    
T  40393897 tttaggagaaaacttaagcacaatttcttaggtgcttttattatggttcttagctaaattcaccataatttcctcaaattttaattttctcaaaatttgt 40393798  T
Q  135 tatatcc 141  Q
    |||||||    
T  40393797 tatatcc 40393791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 23940972 - 23940923
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  23940972 aaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaa 23940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 38405308 - 38405244
Alignment:
Q  41 gaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||||| ||||||| ||||  ||||||| ||||||||||||||||||||||  |||||||    
T  38405308 gaaaaaacttag-tacaatttcttatgtgttttttgtatggttcttaactaaattcataatgattt 38405244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 11828776 - 11828721
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||  || ||||| ||| |||||||||||||    
T  11828776 taggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaactaaa 11828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 38515671 - 38515584
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaa 129  Q
    ||||||||||||||||||||||||||  |||||| ||||| |||| ||||   || |||||||||| ||| |||| ||||||||||||    
T  38515671 aaaacttaggtacaattccttagatgcatttcgtgtggtttttaattaaaaatacaatgatttcctcaaatccataattttctcaaaa 38515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 38629472 - 38629527
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||| ||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  38629472 taggagaaaatttaagtacaattctttaaatgcttttcgtatggttcttaactaaa 38629527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 12234465 - 12234519
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||| ||||| || | || |||||||||||||||||||||||    
T  12234465 aggagaaaacttaggtataattctttgggtgcttttcgtatggttcttaactaaa 12234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 35467170 - 35467224
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| ||||||  |||| || |||||||||||||||    
T  35467170 aggacaaaacttaggtacaattctttagatactttttgtgtggttcttaactaaa 35467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 33100812 - 33100763
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||| ||||  || |||||||| ||||||||||||||    
T  33100812 aaaacttaggtacaatttcttatgtgcttttcgtacggttcttaactaaa 33100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 4e-30; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 14387019 - 14387118
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||    
T  14387019 aaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatcc 14387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 5189636 - 5189537
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttattatatcc 141  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||||||||    
T  5189636 aaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatcc 5189537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 36 - 141
Target Start/End: Original strand, 27240920 - 27241027
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||| |||     
T  27240920 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttg 27241019  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  27241020 ttatatcc 27241027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 40647295 - 40647188
Alignment:
Q  34 attttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatt 131  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||| || ||||||||||||||||||||||||| ||| |||| ||||||||||| ||    
T  40647295 attttaggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 40647196  T
Q  132 tattatat 139  Q
    | ||||||    
T  40647195 tgttatat 40647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 49284292 - 49284397
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatga-tttcctaaagccat-attttctcaaaatttatt 135  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||| |||| |||| ||||| ||||| ||| ||    
T  49284292 taggaaaaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgtt 49284391  T
Q  136 atatcc 141  Q
    ||||||    
T  49284392 atatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 2854531 - 2854635
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||  ||| ||||||||||| ||| |||    
T  2854531 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtta 2854630  T
Q  137 tatcc 141  Q
    |||||    
T  2854631 tatcc 2854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 19954910 - 19955014
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| |||    
T  19954910 aggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 19955009  T
Q  137 tatcc 141  Q
    |||||    
T  19955010 tatcc 19955014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 23698501 - 23698605
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||  ||| ||||||||||| ||| |||    
T  23698501 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtta 23698600  T
Q  137 tatcc 141  Q
    |||||    
T  23698601 tatcc 23698605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 47940569 - 47940673
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||  || |||| ||||||||||| ||| |||    
T  47940569 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtta 47940668  T
Q  137 tatcc 141  Q
    |||||    
T  47940669 tatcc 47940673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 51789596 - 51789666
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||    
T  51789596 aggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcct 51789666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 37 - 128
Target Start/End: Complemental strand, 36880685 - 36880592
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaa 128  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||| ||| |||| |||||||||||    
T  36880685 ttaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaa 36880592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 48954205 - 48954317
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaa 128  Q
    ||||||| |||| ||||||||||||||||||||||| |  ||||| |||||||||||||||||||||| |||||||||| |||  ||| |||||||||||    
T  48954205 taaatttaaggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaa 48954304  T
Q  129 atttattatatcc 141  Q
     ||| ||||||||    
T  48954305 gtttgttatatcc 48954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 957761 - 957658
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| || ||| |||| ||||||||||| ||| |||    
T  957761 aggataaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtta 957662  T
Q  137 tatc 140  Q
    ||||    
T  957661 tatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 42561291 - 42561362
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||||| ||| |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  42561291 tttaggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttc 42561362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 27926255 - 27926353
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcctaaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||| |||||||||  || ||||||||||||||||||||||||||||  ||||||||| || |||| ||||||||||| ||| ||||||||    
T  27926255 aaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcactgtgatttcctcaatccataattttctcaaagtttgttatatcc 27926353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 27928299 - 27928400
Alignment:
Q  41 gaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcctaaagccat-attttctcaaaatttattatat 139  Q
    |||||||||||| ||||||||||||  || |||| |||||||||||||||||||||||  ||||||||| || |||| ||||||||||| ||| ||||||    
T  27928299 gaaaaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattcactgtgatttcctcaatccataattttctcaaagtttgttatat 27928398  T
Q  140 cc 141  Q
    ||    
T  27928399 cc 27928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 50627127 - 50627184
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50627127 tttaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 50627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 50856315 - 50856424
Alignment:
Q  34 attttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcctaaag-ccat-attttctcaaaatt 131  Q
    ||||| ||| |||||||||||| ||||| |||| || |||||||||| |||||| ||||||||||||| ||||||| ||| |||| ||||||||||||||    
T  50856315 atttttggataaaacttaggtaaaattctttaggtgcttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatt 50856414  T
Q  132 tattatatcc 141  Q
    | ||||||||    
T  50856415 tgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 50627303 - 50627199
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| |||    
T  50627303 aggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 50627204  T
Q  137 tatcc 141  Q
    |||||    
T  50627203 tatcc 50627199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 1387945 - 1387846
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||   ||||||||||||| |||  ||| ||||||||||| ||||||||||||    
T  1387945 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattatatcc 1387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 4299568 - 4299513
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4299568 taggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 9978055 - 9978154
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||  || |||||||||| ||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  9978055 aaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatcc 9978154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 15324794 - 15324695
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| ||| |||||||||||||  || |||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  15324794 aaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatcc 15324695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 21930550 - 21930488
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccat 101  Q
    |||| |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21930550 aggagaaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaattcaccat 21930488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 47940743 - 47940689
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47940743 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 47940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 14387182 - 14387133
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14387182 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 14387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 6079524 - 6079452
Alignment:
Q  71 ttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  6079524 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 6079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 25298014 - 25297966
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaa 92  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25298014 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 26208597 - 26208493
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||| ||| |||||||||| || ||||||||||||||| ||||||||||||||| ||||| | ||| |||| ||||||||||| ||| |||    
T  26208597 aggagaaaacttatgtataattccttaggtgcttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgtta 26208498  T
Q  137 tatcc 141  Q
    |||||    
T  26208497 tatcc 26208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 3607733 - 3607832
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| ||||||| |||| ||||| || |||| |||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  3607733 aaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 3607832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 5189459 - 5189522
Alignment:
Q  31 taaatttta-ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  5189459 taaattttaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 19797154 - 19797099
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  19797154 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 49285147 - 49285093
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  49285147 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 51789767 - 51789713
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  51789767 aggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaa 51789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 4299423 - 4299552
Alignment:
Q  71 ttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatccnnnnnnnnntatgtatttttagttaag 168  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||| ||||||||         ||||||||||||||||||    
T  4299423 ttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaag 4299522  T
Q  169 aattaaccatacaaaaaacacctaataaattgta 202  Q
        |||||||| ||||||||||||  |||||||    
T  4299523 ----aaccatacgaaaaacacctaaggaattgta 4299552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 9978219 - 9978170
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9978219 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 27928465 - 27928416
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  27928465 aaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaa 27928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 48954389 - 48954332
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  48954389 tttaggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 48954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 50162536 - 50162641
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| ||||||||||||||||||||||| | ||||| |||||||| |||| |||||||||| |||||| || ||| | || ||||||||||| ||| ||    
T  50162536 taggagaaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgtt 50162635  T
Q  136 atatcc 141  Q
    ||||||    
T  50162636 atatcc 50162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 51276699 - 51276796
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatat 139  Q
    |||| ||||||| |||| | ||| || |||||||||||||||||||||||||||  |||||||||| ||| |||| ||||||||||| ||||||||||    
T  51276699 aaaatttaggtataatttcataggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattatat 51276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 362529 - 362461
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||| |||| ||||||||||||| |||| || |||||||||| |||||||||||||| |||||||||||    
T  362529 aggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaactaaatttaccatgatttc 362461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 2854705 - 2854650
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  2854705 taggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 2854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 19796985 - 19797084
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||| ||||| || ||||||||||||| |||||||||   ||||||||||||| ||| |||| ||||| ||||| ||| ||||||||    
T  19796985 aaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttatatcc 19797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 2125074 - 2125136
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||| |||| ||||||| ||||  || ||||||||||||||||||||||||||||||||||||    
T  2125074 aaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatgattt 2125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 3607901 - 3607847
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  3607901 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 15324625 - 15324679
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  15324625 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 41 - 107
Target Start/End: Original strand, 22338985 - 22339051
Alignment:
Q  41 gaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||||||||| |||||||||||| || || ||||||  ||||||||||||||| |||||||||||||    
T  22338985 gaaaaaacttgggtacaattcctaagttgcttttcgattggttcttaactaaactcaccatgatttc 22339051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 27670299 - 27670213
Alignment:
Q  55 acaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttattatat 139  Q
    |||||||||||  || ||||||||||||| ||||||||||||| |||||||||| |||| |||| ||||||||||| ||| ||||||    
T  27670299 acaattccttatgtgcttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagttttttatat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 29598512 - 29598450
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcac 98  Q
    ||||||| |||||||||||||||||| |||| |  |||| |||||||||||||||||||||||    
T  29598512 tttaggagaaaacttaggtacaattcgttaggtactttttgtatggttcttaactaaattcac 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 42561467 - 42561413
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  42561467 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 42561413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 6079388 - 6079437
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  6079388 aaaactcaggtacaattccttagatgtttttcgtacggttcttcactaaa 6079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 23698669 - 23698620
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  23698669 aaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 23698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 27926419 - 27926370
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||    
T  27926419 aaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 50162706 - 50162657
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  50162706 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 50162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 93
Target Start/End: Original strand, 21930394 - 21930433
Alignment:
Q  54 tacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21930394 tacaattccttagttgtttttcgtatggttcttaactaaa 21930433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 28431702 - 28431769
Alignment:
Q  40 ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||||||| |||| |||||||  |||||| ||||||||||| || ||||||||||||| |||||||||    
T  28431702 ggaaaaaatttagatacaattttttagatatttttcgtatgatttttaactaaattcatcatgatttc 28431769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 46691266 - 46691211
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttc-gtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||| |||||||||    
T  46691266 aggacaaaacttaggtacaattctttagatgtttttctgtatggtttttaactaaa 46691211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 19955083 - 19955029
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| |  |||| ||||||||||||||||||    
T  19955083 aggagaaaacttaggtacaattccttaggtactttttgtatggttcttaactaaa 19955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 27241096 - 27241042
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| |||| || ||| |||||||||||||||||||    
T  27241096 aggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaa 27241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 28244124 - 28244066
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattca 97  Q
    |||||||||||| ||||||||| |||| |||||||| ||||  ||||||||||||||||    
T  28244124 aggaaaaaacttcggtacaatttcttatatgttttttgtataattcttaactaaattca 28244066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 40647120 - 40647169
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| ||||||||||||| || ||||||| |||||||||||||||    
T  40647120 aaaacttagttacaattccttagctgcttttcgtgtggttcttaactaaa 40647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 51276862 - 51276813
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||| ||||| || ||||||||||||||||| |||||    
T  51276862 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaa 51276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 36007813 - 36007889
Alignment:
Q  33 aattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||| ||| ||||||| ||| || |||||||| ||||||| ||| |||||||||||||| |  ||||||||||||    
T  36007813 aatttttggataaaacttgggtgcatttccttaggtgtttttggtacggttcttaactaaactatccatgatttcct 36007889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 2125242 - 2125188
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| |||||||||||| ||||| || ||||||||| |||||||||||||    
T  2125242 aggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaa 2125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 28448045 - 28447991
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| ||| ||||||||||| | |||| ||||||||    
T  28448045 aggataaaacttaggtacaattctttatatgtttttcgtttagttcataactaaa 28447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 36880288 - 36880342
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||  |||  ||||||||||||||||| ||||||||    
T  36880288 aggagaaaacttaggtacaattttttaagtgtttttcgtatggttcctaactaaa 36880342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 22339151 - 22339102
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||| |||||| |||| || ||||| |||||||||||||||||    
T  22339151 aaaacttaggtgcaattctttaggtgcttttcatatggttcttaactaaa 22339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 16518468 - 16518424
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    ||||||||||| |||||| ||||||  ||||||||||||||||||    
T  16518468 aaaacttaggtgcaattctttagatacttttcgtatggttcttaa 16518424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 39617836 - 39617944
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattt 132  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  || |||| ||||||||||| |||    
T  39617836 ttttaggagaaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagttt 39617935  T
Q  133 attatatcc 141  Q
     ||||||||    
T  39617936 gttatatcc 39617944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 24836187 - 24836088
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  24836187 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 24836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 30594856 - 30594761
Alignment:
Q  48 cttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  30594856 cttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 30594761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 20184242 - 20184341
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  20184242 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 20184341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 30259063 - 30259169
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttat 134  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||| |    
T  30259063 ttaggataaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgt 30259162  T
Q  135 tatatcc 141  Q
    |||||||    
T  30259163 tatatcc 30259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 31231618 - 31231715
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatat 139  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||    
T  31231618 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 31231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 34052451 - 34052347
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| |||  ||| ||||||||||| ||| |||    
T  34052451 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgtta 34052352  T
Q  137 tatcc 141  Q
    |||||    
T  34052351 tatcc 34052347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 35339277 - 35339381
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| | ||| |||| ||||||||||| ||| |||    
T  35339277 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgtta 35339376  T
Q  137 tatcc 141  Q
    |||||    
T  35339377 tatcc 35339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 38883388 - 38883289
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  38883388 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcc 38883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 45997512 - 45997611
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||| | ||  || |||| |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||||    
T  45997512 aaaacttaggtacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatcc 45997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 38883216 - 38883274
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38883216 ttttaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 3953041 - 3953145
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||  |  ||||||||||||| ||||||||||||||||||||||||| ||| |||| |||||| |||| ||| |||    
T  3953041 aggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtta 3953140  T
Q  137 tatcc 141  Q
    |||||    
T  3953141 tatcc 3953145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 12142369 - 12142261
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattt 132  Q
    |||||||| |||| || ||||||||||||||  |||||||||||| |||||||||||||||||||||||||| || ||| |||| |||||||||||  ||    
T  12142369 ttttaggagaaaatttgggtacaattccttatgtgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagatt 12142270  T
Q  133 attatatcc 141  Q
     ||||||||    
T  12142269 gttatatcc 12142261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 29278006 - 29277939
Alignment:
Q  42 aaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||||||||| || |||| |||||| || |||||||||||||||||||||||||    
T  29278006 aaaaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcaccatgatttcct 29277939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 10936474 - 10936539
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||| |||||||||||||| || |||||||| |||||||||||||||||||||||| |||||    
T  10936474 aaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcct 10936539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 10936645 - 10936588
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  10936645 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 39143716 - 39143781
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||| || |||| |||||||||||||||| |||||||||||||| |||||||    
T  39143716 aaaacttaggtacaattcattggatgcttttcgtatggttcttgactaaattcaccataatttcct 39143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 33749815 - 33749713
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    ||||||||||||||||| || || ||| || ||||| |||||||||||||||||||||| |||||||||| ||||  ||| ||||||||||| |||||||    
T  33749815 aggaaaaaacttaggtataactc-ttaaatattttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttatta 33749717  T
Q  137 tatc 140  Q
    ||||    
T  33749716 tatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 31231788 - 31231734
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  31231788 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 31521538 - 31521628
Alignment:
Q  53 gtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||||||| || |||  ||| ||||| ||||| ||||||||||||    
T  31521538 gtacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattatatcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 35665629 - 35665699
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||   ||||||||||    
T  35665629 tttaggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaataccatgattt 35665699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 38528584 - 38528530
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  38528584 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 9285718 - 9285783
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||| || | || |||| ||||||||||||| ||||||||||||||||||||    
T  9285718 aaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcct 9285783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 9289785 - 9289850
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||| || | || |||| ||||||||||||| ||||||||||||||||||||    
T  9289785 aaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcct 9289850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 33721826 - 33721879
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaa 92  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  33721826 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 40358290 - 40358184
Alignment:
Q  39 aggaaaaaacttaggtacaattcct---tagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    |||| ||||||||||||||||||||   ||| || ||||| |||| |||||||||||||||||||||||||||| |||  ||| ||||||||||| |||     
T  40358290 aggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttg 40358191  T
Q  134 ttatatc 140  Q
    |||||||    
T  40358190 ttatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 25742433 - 25742492
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattca 97  Q
    ||||| |||||||| |||||||| ||||| |||||||| |||||||||||||||||||||    
T  25742433 taggagaaaacttatgtacaatttcttaggtgtttttcctatggttcttaactaaattca 25742492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 39143873 - 39143826
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaacta 91  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||    
T  39143873 aaaacttaggtacaattcattaggtgtttttcgtatggttcttaacta 39143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 20184411 - 20184357
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  20184411 aggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaa 20184357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 34052274 - 34052332
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| |||||||||||||| |||||||| || |||||||||||||||||||||||    
T  34052274 tttttggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaa 34052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 48103367 - 48103421
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| ||||||||||||| ||||||||||||    
T  48103367 aggagaaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaa 48103421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 10398486 - 10398421
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||||||| || ||||||| ||| |||| ||||||||||||||||||||  ||||||||||||    
T  10398486 aaaacttaggtgcatttccttatatgctttttgtatggttcttaactaaattatccatgatttcct 10398421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 35665783 - 35665734
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  35665783 aaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 35665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 37093935 - 37093870
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| |||| ||||||| ||||| |  ||||||||||||| |||||||||||||||||||||||||    
T  37093935 aaaatttagatacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcct 37093870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 24836019 - 24836073
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| || ||||||||||||||| |||||||    
T  24836019 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaa 24836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 30259238 - 30259184
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||| | || |||| ||||||||||||||||||    
T  30259238 aggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaa 30259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 30594692 - 30594746
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||| || |||||||||||||    
T  30594692 aggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaa 30594746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 47237600 - 47237546
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| || || || |||||||||||||||||||||||    
T  47237600 aggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaa 47237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 38528394 - 38528443
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  38528394 aaaagttaggtacaattccttaaatgctttttgtatggttcttaactaaa 38528443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 11486872 - 11486912
Alignment:
Q  48 cttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    ||||||||||||| |||||||| ||||||||||||||||||    
T  11486872 cttaggtacaatttcttagatgcttttcgtatggttcttaa 11486912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 47237429 - 47237487
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaatt 95  Q
    ||||||| |||||||||||| ||||||| || || ||||| |||||||||||||||||||    
T  47237429 tttaggagaaaacttaggtataattcct-aggtgcttttcctatggttcttaactaaatt 47237487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 85
Target Start/End: Original strand, 17101653 - 17101699
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttct 85  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||    
T  17101653 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 45997680 - 45997626
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||| ||||| ||||||||||| ||||||  ||||||||||||||||||    
T  45997680 aggagaaaacctaggtgcaattccttaggtgttttaggtatggttcttaactaaa 45997626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 12142196 - 12142245
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||  || |||  ||||||||||||||||||    
T  12142196 aaaacttaggtacaattccttacgtgctttgggtatggttcttaactaaa 12142245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 17101741 - 17101700
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttct 85  Q
    ||||||||||||||||| ||||| || |||||||||||||||    
T  17101741 aaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 29277842 - 29277891
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||| |||| |  |||| ||||||||||||||||||    
T  29277842 aaaacttaggtacaattctttaggtactttttgtatggttcttaactaaa 29277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 35339445 - 35339396
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||  |  |||||||||||||||||| ||||    
T  35339445 aaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaa 35339396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 48103532 - 48103480
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattc 96  Q
    ||||||||  |||||||| |||| || |||| |||||||||||||||||||||    
T  48103532 aaaacttatctacaattctttaggtgctttttgtatggttcttaactaaattc 48103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 21969156 - 21969260
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| |||    
T  21969156 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtta 21969255  T
Q  137 tatcc 141  Q
    |||||    
T  21969256 tatcc 21969260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 21991592 - 21991696
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| |||    
T  21991592 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtta 21991691  T
Q  137 tatcc 141  Q
    |||||    
T  21991692 tatcc 21991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 36278748 - 36278859
Alignment:
Q  32 aaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaa 129  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||  ||| |||||||||||     
T  36278748 aaattttaggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaag 36278847  T
Q  130 tttattatatcc 141  Q
    ||| ||||||||    
T  36278848 tttgttatatcc 36278859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 3970488 - 3970594
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttat 134  Q
    |||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| |    
T  3970488 ttaggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgt 3970587  T
Q  135 tatatcc 141  Q
    |||||||    
T  3970588 tatatcc 3970594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 45487974 - 45487901
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  45487974 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcct 45487901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 26906634 - 26906522
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaa 128  Q
    |||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||  ||| |||||||||||    
T  26906634 taaattataggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaa 26906535  T
Q  129 atttattatatcc 141  Q
     ||| ||||||||    
T  26906534 gtttgttatatcc 26906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 13078167 - 13078266
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||| ||| ||||||||    
T  13078167 aaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatcc 13078266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 4072270 - 4072376
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttat 134  Q
    |||||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||  || |||| ||||||||||| ||| |    
T  4072270 ttaggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgt 4072369  T
Q  135 tatatcc 141  Q
    |||||||    
T  4072370 tatatcc 4072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 25446421 - 25446318
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| |||    
T  25446421 aggagaaaacttag-tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 25446323  T
Q  137 tatcc 141  Q
    |||||    
T  25446322 tatcc 25446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 50099606 - 50099502
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| |||  ||| ||||||||||| ||| |||    
T  50099606 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgtta 50099507  T
Q  137 tatcc 141  Q
    |||||    
T  50099506 tatcc 50099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 12838244 - 12838145
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  12838244 aaaacttatgtacaattctttaggtgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12838145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 32237398 - 32237497
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| || | | |||| ||||||||||| ||| ||||||||    
T  32237398 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatatcc 32237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 35368908 - 35368801
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| ||||||||||||||||| ||||  |||||||||||||||| |||||||||||||||||||||| || ||| |||| ||||||||||| |||     
T  35368908 tttaggagaaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttg 35368809  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  35368808 ttatatcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 37 - 140
Target Start/End: Original strand, 36657430 - 36657535
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttat 134  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| |    
T  36657430 ttaggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgt 36657529  T
Q  135 tatatc 140  Q
    ||||||    
T  36657530 tatatc 36657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 36822754 - 36822863
Alignment:
Q  34 attttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatt 131  Q
    ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||   ||||||||||||| | | |||| ||||||||||| ||    
T  36822754 attttaggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtt 36822853  T
Q  132 tattatatcc 141  Q
    | ||||||||    
T  36822854 tgttatatcc 36822863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 8831908 - 8831809
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||||||| | ||| |||| ||||||||||| ||| ||||||||    
T  8831908 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatcc 8831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 22101332 - 22101233
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||   | |||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  22101332 aaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatcc 22101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 41 - 109
Target Start/End: Original strand, 1476552 - 1476620
Alignment:
Q  41 gaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||||||||||| || |||| |||||||||| | |||||||||||||||||||||    
T  1476552 gaaaaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatgatttcct 1476620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 404211 - 404113
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcctaaag-ccat-attttctcaaaatttattatatcc 141  Q
    ||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| ||| ||||||||    
T  404211 aaaacttag-tacaattctttagatgctttccgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatatcc 404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 10254736 - 10254637
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| || ||| |||| ||||| ||||| ||| ||||||||    
T  10254736 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttatatcc 10254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 22176276 - 22176177
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||  || |||| ||||||||||||||||||||||| |||||||||| ||| |||| ||||||||||| ||| | ||||||    
T  22176276 aaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtaatatcc 22176177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 46222027 - 46222094
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||| ||| ||||||| ||||| |||||||||||||||| ||||||||||||||||||||||    
T  46222027 aggaaaaaacctagttacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatgattt 46222094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 4072446 - 4072392
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4072446 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 12789605 - 12789659
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12789605 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 12789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 26977865 - 26977759
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| ||||||||||||||||| |||||||  ||||| ||||||||||||||||||| |  |||||||||| ||| |||| ||||||||||| ||||    
T  26977865 tttaggagaaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagttta 26977766  T
Q  134 ttatatc 140  Q
    || ||||    
T  26977765 ttgtatc 26977759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 36657605 - 36657551
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36657605 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 39850343 - 39850413
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||    
T  39850343 aggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaataccatgatttcct 39850413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 21969332 - 21969275
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21969332 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 21991768 - 21991711
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21991768 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 25561183 - 25561115
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||| ||| |||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  25561183 aggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttc 25561115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 43639080 - 43639184
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||| || |||||||||| || |||||||||| |||||||| ||||||||||||||||| | ||| |||| ||||||||||| ||| |||    
T  43639080 aggagaaaacttagttataattccttaggtgcttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgtta 43639179  T
Q  137 tatcc 141  Q
    |||||    
T  43639180 tatcc 43639184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 55340292 - 55340396
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||| |||||||||||| ||||  ||||||||||||| |||||||||| |||||||||||||| || ||| |||| ||||||||||| ||| |||    
T  55340292 aggagaaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgtta 55340391  T
Q  137 tatcc 141  Q
    |||||    
T  55340392 tatcc 55340396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 25488349 - 25488408
Alignment:
Q  48 cttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  25488349 cttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttc 25488408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 45712907 - 45713006
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || ||||  | |  |||||||||||||||||||||||||||| |||||||| ||||| ||||| ||| ||||||||    
T  45712907 aaaacttaggtacaattccttaggtgctttttttttttttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgttatatcc 45713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 10117683 - 10117625
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattca 97  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||||||||||||||    
T  10117683 aggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 10117625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 12789778 - 12789708
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||| |||| |||||||||| || |||| ||||||||||||| ||||||||||||||||||||    
T  12789778 aggagaaaactttggtagaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcct 12789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 38125351 - 38125297
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  38125351 aggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaa 38125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 45487798 - 45487852
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  45487798 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 26906450 - 26906507
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  26906450 tttaggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 26906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 32237568 - 32237512
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  32237568 ttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 39850519 - 39850463
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| ||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  39850519 ttaggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 39850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 46679433 - 46679329
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||| |||||||||||| |||| ||||  || |||||||||||||||||||||| ||||||| ||| |||| ||||||||||| ||| |||    
T  46679433 aggagaaaacttaagtacaattccttggatgctttttatacggttcttaactaaattcaccataatttcctcaaatccataattttctcaaagtttgtta 46679334  T
Q  137 tatcc 141  Q
     ||||    
T  46679333 aatcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 13723992 - 13724054
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||||||||||||||| ||||| || |||| ||||||||||| ||||||||||||||||||||    
T  13723992 aaaacttaggtacaatttcttaggtgctttttgtatggttctt-actaaattcaccatgatttc 13724054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 25488514 - 25488459
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  25488514 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 25561009 - 25561064
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  25561009 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 42105382 - 42105449
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||||||||||||||| | ||| |  ||||| ||||||||||||||||||||||| ||||||    
T  42105382 aggaaaaaacttaggtacaatttcataggtacttttcttatggttcttaactaaattcaccgtgattt 42105449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 1476723 - 1476669
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  1476723 aggataaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 1476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 8831743 - 8831793
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  8831743 aaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 8831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 35368548 - 35368602
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||  || |||||||||||||||||||||||    
T  35368548 aggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 35368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 36278936 - 36278874
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| ||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  36278936 taaaatttgggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 36278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 49984099 - 49984001
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatga-tttcctaaagccat-attttctcaaaatttattatat 139  Q
    ||||||||||||| ||||  |||| |  |||||||| | |||||||||||||||||||||| |||| |||| |||| ||||| ||||||||||||||||    
T  49984099 aaaaacttaggtataattttttaggtacttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 297539 - 297592
Alignment:
Q  42 aaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaatt 95  Q
    ||||||||||||||||||||||| | || ||||||||||||||||| |||||||    
T  297539 aaaaaacttaggtacaattcctttggtgcttttcgtatggttcttagctaaatt 297592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 5529895 - 5529944
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  5529895 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10017118 - 10017167
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  10017118 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10254572 - 10254621
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  10254572 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 26977009 - 26976960
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  26977009 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 26976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 37506301 - 37506244
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| |||||||| ||||||||| |||| |||||||||| |||||||||||||||    
T  37506301 tttaggacaaaacttatgtacaattctttaggtgtttttcgtgtggttcttaactaaa 37506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 43639249 - 43639200
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  43639249 aaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 43639200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 45713070 - 45713021
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  45713070 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 45713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 10441257 - 10441361
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||| |||||||||||||| || |||| ||||| ||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| |||    
T  10441257 aggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 10441356  T
Q  137 tatcc 141  Q
    |||||    
T  10441357 tatcc 10441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 44611381 - 44611448
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||| ||||||||| ||||||||||||| |  |||| |||| |||||||||||||||||||||||||||    
T  44611381 aggagaaaacttag-tacaattccttaggtactttttgtatagttcttaactaaattcaccatgatttc 44611448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 26976841 - 26976944
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||| ||||| || ||||||||| |||||||| |||||| |  ||||||| || ||| |||| ||||||||||| ||||||     
T  26976841 aggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattg 26976940  T
Q  137 tatc 140  Q
    ||||    
T  26976941 tatc 26976944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 3970663 - 3970609
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| |  |||||||||||||||||||||||    
T  3970663 aggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaa 3970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 10441430 - 10441376
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||| ||| ||||||||||||||    
T  10441430 aggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaa 10441376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 13724160 - 13724106
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| ||||||||||||||||||||||||||||||||  || |||||||||    
T  13724160 aggagaaatcttaggtacaattccttagatgtttttcgtataatttttaactaaa 13724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 20366705 - 20366739
Alignment:
Q  59 ttccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||||||||||||||||||    
T  20366705 ttccttagatgtttttcgtatggttcttaactaaa 20366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 43150652 - 43150548
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttat 134  Q
    |||||| ||||||||| || |||||| |||||| ||| |||||| ||||||||||||||||| |||||||||| |||  ||| ||||||||||| ||| |    
T  43150652 ttaggagaaaacttag-tagaattccatagatgcttt-cgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgt 43150555  T
Q  135 tatatcc 141  Q
    |||||||    
T  43150554 tatatcc 43150548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 44611545 - 44611499
Alignment:
Q  47 acttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||    
T  44611545 acttaggtacaattccttaggtgttttttgtatggtttttaactaaa 44611499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10117519 - 10117568
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||| |||||||| || ||||| |||||||||||||||||    
T  10117519 aaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaa 10117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 12838081 - 12838130
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||| || |||| ||||||||||||||||||    
T  12838081 aaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaa 12838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 32362865 - 32362914
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  32362865 aaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaa 32362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 36822927 - 36822878
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||  |||| || |||||||||||||||||||||||    
T  36822927 aaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 36822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 55340461 - 55340412
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  55340461 aaaacttagatacaattccttaggtatttttcatatggttcttaactaaa 55340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 10017276 - 10017232
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    |||| |||||||||||||||||| || ||||||||||||||||||    
T  10017276 aaaatttaggtacaattccttaggtgcttttcgtatggttcttaa 10017232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 44920638 - 44920749
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaa 128  Q
    |||||||||| | |||| |||  ||||||||||||| || ||||| ||||||||||||||||||| || ||||||| || |||   || |||||||||||    
T  44920638 taaattttagaagaaaatttaaatacaattccttag-tgcttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaa 44920736  T
Q  129 atttattatatcc 141  Q
     ||||||||||||    
T  44920737 gtttattatatcc 44920749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 13078340 - 13078281
Alignment:
Q  34 attttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||| ||||||||||||||||| ||||| |  |||||||||| ||||||||||||    
T  13078340 atttttggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaa 13078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 25446249 - 25446302
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| ||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  25446249 taggagaaaacttag-tacaattccttag-tgcttttcgtatggttcttaactaaa 25446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 36329186 - 36329244
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattc 96  Q
    ||||| ||||||||||||||||| |||||||  |||| |||| |||||||| |||||||    
T  36329186 taggagaaaacttaggtacaatttcttagatactttttgtattgttcttaaataaattc 36329244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 44920825 - 44920764
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||| ||||||||||||||||| |||| ||||||||  ||| |||||||||||||    
T  44920825 taaaatttaggagaaaacttaggtacaatttcttatatgttttt-ttatagttcttaactaaa 44920764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 46664175 - 46664229
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| |||||||||||| ||||| | |||||||||| |||||||||||||    
T  46664175 aggagaaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaa 46664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 42105550 - 42105501
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||| | ||| ||||||| ||||||||||||||||||    
T  42105550 aaaacttaagtacaatttcgtaggtgttttttgtatggttcttaactaaa 42105501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 43150484 - 43150533
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||| |||||||| || || ||||||||||||| |||||||||    
T  43150484 aaaacttaggtgcaattcctcaggtgcttttcgtatggtttttaactaaa 43150533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 36329354 - 36329298
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| ||||  ||| |||||||| |||| || |||||||||||||||||||||||    
T  36329354 ttaggagaaaaggtagctacaattctttaggtgcttttcgtatggttcttaactaaa 36329298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 9e-28; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 20476603 - 20476500
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||||||| |||    
T  20476603 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgtta 20476504  T
Q  137 tatc 140  Q
    ||||    
T  20476503 tatc 20476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 40 - 140
Target Start/End: Original strand, 32623215 - 32623317
Alignment:
Q  40 ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc-ctaaagccat-attttctcaaaatttattat 137  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||| |||| ||||||||||| ||| ||||    
T  32623215 ggaaaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgttat 32623314  T
Q  138 atc 140  Q
    |||    
T  32623315 atc 32623317  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 44 - 204
Target Start/End: Complemental strand, 12744993 - 12744839
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||| |||  ||| ||||||||||| ||| ||||||||    
T  12744993 aaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcc 12744894  T
Q  142 nnnnnnnnntatgtatttttagttaagaattaaccatacaaaaaacacctaataaattgtatt 204  Q
             |||||||||||||||||     ||||||||||||||||||||| ||||||||||    
T  12744893 ---aaaaaatatgtatttttagttaa----aaaccatacaaaaaacacctaa-aaattgtatt 12744839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 4266154 - 4266086
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  4266154 aggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccgtgatttc 4266086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 140
Target Start/End: Complemental strand, 15856019 - 15855912
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattt 132  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| |||    
T  15856019 tttttggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagttt 15855920  T
Q  133 attatatc 140  Q
     |||||||    
T  15855919 gttatatc 15855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 16472953 - 16473008
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16472953 taggaaaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 35420611 - 35420714
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| |||    
T  35420611 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 35420710  T
Q  137 tatc 140  Q
    ||||    
T  35420711 tatc 35420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 12808078 - 12807980
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttattatatc 140  Q
    ||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||||| |||| |||| ||||| ||||| ||| |||||||    
T  12808078 aaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatgatttccttaaatccataattttttcaaagtttgttatatc 12807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 13754290 - 13754360
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||||||    
T  13754290 aggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcaccataatttcct 13754360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 16473122 - 16473024
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatc 140  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| |||||||    
T  16473122 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 16473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 21591204 - 21591282
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||| ||| ||||||||||||||||||||||  || ||||||||||||| | |||||||||||||||||||||||    
T  21591204 taaatttttggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcct 21591282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 21595321 - 21595399
Alignment:
Q  31 taaattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||| ||| ||||||||||||||||||||||  || ||||||||||||| | |||||||||||||||||||||||    
T  21595321 taaatttttggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcct 21595399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 1138731 - 1138627
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||  ||||||| || ||| |||| ||||||||||| ||| |||    
T  1138731 aggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgtta 1138632  T
Q  137 tatcc 141  Q
    |||||    
T  1138631 tatcc 1138627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 33629344 - 33629448
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||  || |||| ||||||||||||||||||||||| ||||||| || ||| |||| ||||||||||| ||| |||    
T  33629344 aggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgtta 33629443  T
Q  137 tatcc 141  Q
    |||||    
T  33629444 tatcc 33629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 43539279 - 43539175
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatga-tttcctaaagccat-attttctcaaaatttatta 136  Q
    |||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||||| | ||| |||| |||| |||| ||||||||||| ||| |||    
T  43539279 aggagaaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaagtttgtta 43539180  T
Q  137 tatcc 141  Q
    |||||    
T  43539179 tatcc 43539175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 10132426 - 10132359
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  10132426 aggaaaaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattcaccacgattt 10132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 15855842 - 15855896
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15855842 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 35420784 - 35420730
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35420784 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 4265981 - 4266035
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  4265981 aggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 33629519 - 33629465
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  33629519 aggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaa 33629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 2268772 - 2268707
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||| |||| |||||||| |||| |||||||||||||||||||||||  |||||||||    
T  2268772 aaaacttaggtataatttcttagatgctttttgtatggttcttaactaaattcactgtgatttcct 2268707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 4913319 - 4913258
Alignment:
Q  41 gaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatg 102  Q
    ||||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||| ||||    
T  4913319 gaaaaaacttacgtacaatttcttaggtgttttttgtatggttcttaactaaattcatcatg 4913258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 24397413 - 24397364
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  24397413 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 21259729 - 21259833
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||| ||||||||| |||  || |||||||||||||||||  |||||||||||||||||||| |||  ||| ||||||||||| ||| |||    
T  21259729 aggagaaaacttacgtacaattctttatgtgcttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgtta 21259828  T
Q  137 tatcc 141  Q
    |||||    
T  21259829 tatcc 21259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 19976429 - 19976330
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| || ||||||||| ||| || | |||||| ||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  19976429 aaaatttaggtacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatcc 19976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 780965 - 780915
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||||    
T  780965 taggaaaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20476430 - 20476484
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  20476430 aggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaactaaa 20476484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 2529140 - 2529083
Alignment:
Q  52 ggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||||| ||||| || ||||||| ||||||||||||||||||||| |||||||||    
T  2529140 ggtacaatttcttaggtgcttttcgtgtggttcttaactaaattcaccgtgatttcct 2529083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 8364797 - 8364748
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 8364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 141
Target Start/End: Complemental strand, 21262100 - 21262011
Alignment:
Q  54 tacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagcca-tattttctcaaaatttattatatcc 141  Q
    |||||||||||||  | |||| |||||||||||||||||||||| ||||||||||| ||| |||  ||||||||||| ||| ||||||||    
T  21262100 tacaattccttagcagctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatcc 21262011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 35807104 - 35807040
Alignment:
Q  42 aaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||| ||||||| |||| |||||||| |||| |||||||||| | ||||||||||||||||||    
T  35807104 aaaaaatttaggtaaaatttcttagatgatttttgtatggttctaacctaaattcaccatgattt 35807040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 1138557 - 1138612
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||||||||||||||||| || | || |||||||||||||||||||||||    
T  1138557 taggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 1138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 780793 - 780863
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| |||| ||||||| ||||||||||||  ||||||||||  |||| | ||||||||||||||||||||    
T  780793 aggagaaaagttaggtagaattccttagattcttttcgtatgactcttgattaaattcaccatgatttcct 780863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 10304823 - 10304773
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaat 94  Q
    ||||||||||| ||||||||||||||||||| ||||| || ||||||||||    
T  10304823 aaaacttaggtgcaattccttagatgttttttgtatgatttttaactaaat 10304773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 37552307 - 37552377
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| |||||||||||||||||| ||   || |||| ||| |||||||||||||||||||||||| |||||    
T  37552307 aggagaaaacttaggtacaattcattccgtgctttttgtacggttcttaactaaattcaccatgacttcct 37552377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 1164963 - 1164914
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||| || |||||||||||||||||| ||||    
T  1164963 aaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaa 1164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 2255629 - 2255580
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||| |||| || ||||||| |||||||||||||||    
T  2255629 aaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 2255580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 13754458 - 13754409
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| |||||||| ||||| ||||||||||||||||||||||||||    
T  13754458 aaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 21259905 - 21259848
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| |||| |||||||||||||||||| |  ||||| |||||||||||||||||    
T  21259905 tttaggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaa 21259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 29141804 - 29141853
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaa 88  Q
    |||| ||||||||| ||||||| ||||| |||||||||||||||||||||    
T  29141804 aggagaaaacttagatacaattgcttaggtgtttttcgtatggttcttaa 29141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 12807905 - 12807964
Alignment:
Q  33 aattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||| ||||||||  ||||||| ||||| |||||||||||||||| |||||||||    
T  12807905 aattttaggagaaaacttaa-tacaatttcttaggtgtttttcgtatggtttttaactaaa 12807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 24397282 - 24397348
Alignment:
Q  76 gtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  24397282 gtatggttcttaactaaattca-catgatttcctcaaatccataattttctcaaagtttgttatatcc 24397348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 2268176 - 2268225
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||| ||||    
T  2268176 aaaaattaggtacaattccttaagtgttttttgtatggttcttaattaaa 2268225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Complemental strand, 18236612 - 18236583
Alignment:
Q  67 atgtttttcgtatggttcttaactaaattc 96  Q
    ||||||||||||||||||||||||||||||    
T  18236612 atgtttttcgtatggttcttaactaaattc 18236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 106
Target Start/End: Original strand, 8364668 - 8364696
Alignment:
Q  78 atggttcttaactaaattcaccatgattt 106  Q
    |||||||||||||||||||||||||||||    
T  8364668 atggttcttaactaaattcaccatgattt 8364696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 10499979 - 10499947
Alignment:
Q  60 tccttagatgtttttcgtatggttcttaactaa 92  Q
    ||||||| |||||||||||||||||||||||||    
T  10499979 tccttaggtgtttttcgtatggttcttaactaa 10499947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 17583411 - 17583367
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggtt 83  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||    
T  17583411 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggtt 17583367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 25751618 - 25751570
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaa 92  Q
    |||||||||||||||||  |||| || ||||||| ||||||||||||||    
T  25751618 aaaacttaggtacaattttttaggtgcttttcgtgtggttcttaactaa 25751570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 35806928 - 35806988
Alignment:
Q  33 aattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||| |||| ||| ||||||||| |||| || ||||| |||||||||||||||||    
T  35806928 aatttaaggacaaaatttaagtacaattctttaggtgcttttcatatggttcttaactaaa 35806988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 43476121 - 43476014
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  ||| ||||||||||| ||||    
T  43476121 tttaggagaaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagttta 43476022  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  43476021 ttatatcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 7737237 - 7737133
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| |||    
T  7737237 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgtta 7737138  T
Q  137 tatcc 141  Q
    |||||    
T  7737137 tatcc 7737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 2818833 - 2818734
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||  |||||||    
T  2818833 aaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatatatcc 2818734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 202
Target Start/End: Complemental strand, 45408792 - 45408639
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  45408792 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 45408693  T
Q  142 nnnnnnnnntatgtatttttagttaagaattaaccatacaaaaaacacctaataaattgta 202  Q
             ||||||||||||||||||    |||||||||||||||||||||  |||||||    
T  45408692 ---aaaaaatatgtatttttagttaag----aaccatacaaaaaacacctaaggaattgta 45408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 1923979 - 1924083
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||  || |||| ||||||||||| ||| |||    
T  1923979 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtta 1924078  T
Q  137 tatcc 141  Q
    |||||    
T  1924079 tatcc 1924083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 24101831 - 24101935
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||||| ||| |||| ||||||||||| ||| |||    
T  24101831 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgtta 24101930  T
Q  137 tatcc 141  Q
    |||||    
T  24101931 tatcc 24101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 42713776 - 42713880
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||| |||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||||    
T  42713776 aggagaaaatttagatataattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttatta 42713875  T
Q  137 tatcc 141  Q
    |||||    
T  42713876 tatcc 42713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 10553048 - 10552986
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  10553048 aaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaattcaccatgattt 10552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 27920744 - 27920640
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||| ||| |||    
T  27920744 aggagaaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgtta 27920645  T
Q  137 tatcc 141  Q
    |||||    
T  27920644 tatcc 27920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 9933569 - 9933671
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||| || ||| |||| ||||||||||| |||||||    
T  9933569 aggagaaaacttaggtacaattcattag-tgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttatta 9933667  T
Q  137 tatc 140  Q
    ||||    
T  9933668 tatc 9933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 1924157 - 1924099
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1924157 ttttaggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 1924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 22269895 - 22269790
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| ||    
T  22269895 taggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgtt 22269796  T
Q  136 atatcc 141  Q
    ||||||    
T  22269795 atatcc 22269790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 34490629 - 34490524
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||   ||||||||||||| | | |||| ||||||||||| ||| ||    
T  34490629 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgtt 34490530  T
Q  136 atatcc 141  Q
    ||||||    
T  34490529 atatcc 34490524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 3117048 - 3116944
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||  ||||||| || ||| |||| ||||||||||| ||| |||    
T  3117048 aggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgtta 3116949  T
Q  137 tatcc 141  Q
    |||||    
T  3116948 tatcc 3116944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 7116542 - 7116474
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| ||||| |||||    
T  7116542 aggaaaagacttaggtacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttc 7116474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 16705900 - 16705801
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| || ||||||||||||| |||||||||||||| ||||||| || |||||||| ||||| ||||| ||| ||||||||    
T  16705900 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgttatatcc 16705801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 40362654 - 40362587
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||| ||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||    
T  40362654 aggaaataacttaggtacaactccgtgtatgtttttcgtatggttcttaactaaattcaccatgattt 40362587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 34490452 - 34490509
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  34490452 tttaggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 34490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 9281351 - 9281450
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||| ||||||||||||||| |  ||||| |||||||||||||||||||||| |||||||||| |||  ||| ||||||||||| ||| ||||||||    
T  9281351 aaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatcc 9281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 12850546 - 12850645
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||||||||| |  |||| |||||||| ||||||||||| ||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12850645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 16705732 - 16705786
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  16705732 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 45408624 - 45408678
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  45408624 aggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaa 45408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 6605906 - 6605803
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||||||||||||||||| |||| || |||| ||||||||||| |||||||| ||||||||||||| |||  ||| ||||||||||| ||| |||    
T  6605906 aggagaaaacttaggtacaattctttaggtgctttttgtatggttctt-actaaatttaccatgatttcctcaaatgcataattttctcaaagtttgtta 6605808  T
Q  137 tatcc 141  Q
    |||||    
T  6605807 tatcc 6605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 9281521 - 9281465
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  9281521 ttaggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 9281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 29229360 - 29229467
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatg--tttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaa-ttta 133  Q
    |||| ||||||||||||||||| ||||  ||  ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| |||||||||||| ||||    
T  29229360 aggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagttta 29229459  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  29229460 ttatatcc 29229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 29342660 - 29342767
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatg--tttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaa-ttta 133  Q
    |||| ||||||||||||||||| ||||  ||  ||||||||||| |||||||||| ||||| ||||||||||| ||| |||| |||||||||||| ||||    
T  29342660 aggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagttta 29342759  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  29342760 ttatatcc 29342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 9850789 - 9850860
Alignment:
Q  71 ttttcgtatggttcttaactaaattcaccatga-tttcctaaagccat-attttctcaaaatttattatatc 140  Q
    ||||||||||||||||||||||||| ||||||| |||| |||| |||| ||||||||||||||| |||||||    
T  9850789 ttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatc 9850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 17434848 - 17434798
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaat 94  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  17434848 aaaaactt-ggtacaattccttagatgtttttcgtatgattcttaactaaat 17434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 23835874 - 23835929
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||||||| |||||||||||||| || |||||||||||||||||||||||    
T  23835874 taggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 20892883 - 20892937
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  20892883 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 43858606 - 43858548
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattca 97  Q
    |||| |||| |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  43858606 aggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaattca 43858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12850709 - 12850660
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  12850709 aaaacttaggtccaattcctcagatgcttttcgtatggttcttaactaaa 12850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 22269726 - 22269775
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  22269726 aaaacttaggtacaattccttaggtgtttttcgtatgatttttaactaaa 22269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 24101999 - 24101950
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||||||||||||| || |||||||||||||||||||||||    
T  24101999 aaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 34455889 - 34455938
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  34455889 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 2818671 - 2818719
Alignment:
Q  45 aaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||||| || |||||||||| ||||||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 2818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 3116874 - 3116929
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||||||||||||||||| || | || |||||||||||||||||||||||    
T  3116874 taggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 3116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 17434704 - 17434763
Alignment:
Q  48 cttaggtacaattccttagatg-tttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||| |||||||||||| | | |||||||||||||||||||||||||||||||| ||||    
T  17434704 cttagatacaattccttatacgctttttcgtatggttcttaactaaattcaccataattt 17434763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 17500005 - 17500064
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcac 98  Q
    ||||||||||||   ||||||| ||||  |||||||||||||||||||||||||||||||    
T  17500005 aggaaaaaacttgaatacaatttcttatgtgtttttcgtatggttcttaactaaattcac 17500064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 34456052 - 34455953
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    |||| |||||||||||| ||||  ||||||||||||||||| ||| |||||||| ||| ||||||| ||| | || ||||||||||| ||| ||||||||    
T  34456052 aaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatatcc 34455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 9933741 - 9933687
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| |||||||||||| ||||| || |||||||||||||||||||||||    
T  9933741 aggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 7116374 - 7116423
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||| ||||||  ||||||||||||||| |||||||    
T  7116374 aaaacttaggtacaattctttagatacttttcgtatggttctcaactaaa 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 23836017 - 23835945
Alignment:
Q  71 ttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||| ||||| ||||| ||||||||||||| ||| |||| ||||||||||| ||| ||||||||    
T  23836017 ttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 23835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 7737068 - 7737117
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||| ||||| || |||| ||||| ||||||||||||    
T  7737068 aaaacttaggtacaatttcttaggtgcttttggtatgattcttaactaaa 7737117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 9850920 - 9850875
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||||||||     ||||||||||||||||||||||||||    
T  9850920 aaaacttaggtacaattcc----gtgtttttcgtatggttcttaactaaa 9850875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 4890473 - 4890583
Alignment:
Q  33 aattttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaat 130  Q
    |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||  ||| ||||||||||| |    
T  4890473 aattttaggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagt 4890572  T
Q  131 ttattatatcc 141  Q
    || ||||||||    
T  4890573 ttgttatatcc 4890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 14393739 - 14393602
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| |||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||     
T  14393739 tttaggagaaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttg 14393640  T
Q  134 ttatatccnnnnnnnnntatgtatttttagttaagaat 171  Q
    ||||||||         |||||||||||||||||||||    
T  14393639 ttatatccaaaaagaaatatgtatttttagttaagaat 14393602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 21379937 - 21380010
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  21379937 tttaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcct 21380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 13439871 - 13439764
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| ||||||||||||||||| |  || |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||     
T  13439871 tttaggagaaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttg 13439772  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  13439771 ttatatcc 13439764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 8091234 - 8091130
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||||||| ||| |||    
T  8091234 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgtta 8091135  T
Q  137 tatcc 141  Q
    |||||    
T  8091134 tatcc 8091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 15546804 - 15546700
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||||||||| ||| |||| ||||||||||| ||| |||    
T  15546804 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgtta 15546705  T
Q  137 tatcc 141  Q
    |||||    
T  15546704 tatcc 15546700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 11687141 - 11687245
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||   | ||||||||||| ||| |||| ||||||||||| ||| ||    
T  11687141 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtt 11687240  T
Q  136 atatc 140  Q
    |||||    
T  11687241 atatc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 29609169 - 29609073
Alignment:
Q  43 aaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttattat 137  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||| |||| |||| ||||||||||| ||| ||||    
T  29609169 aaaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 29609073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 885560 - 885453
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattta 133  Q
    ||||||| ||||||||||||||||||||||| || ||||| |||| |||||||||||||||| |||||||| || ||| |||| ||||||||||| |||     
T  885560 tttaggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttg 885461  T
Q  134 ttatatcc 141  Q
    ||||||||    
T  885460 ttatatcc 885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 140
Target Start/End: Original strand, 18998121 - 18998218
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatc 140  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||  || |||| ||||||||||| ||| |||||||    
T  18998121 aaaacttaggtacaattccttaggtgtttttcgta-cgttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatc 18998218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 13172573 - 13172676
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||  || ||||||| ||| |||| ||||||||||| ||| |||    
T  13172573 aggagaaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattca-tatcatttcctcaaatccataattttctcaaagtttgtta 13172671  T
Q  137 tatcc 141  Q
    |||||    
T  13172672 tatcc 13172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 7808776 - 7808677
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||   ||||||||||||| ||| | || ||||||||||| ||| ||||||||    
T  7808776 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttatatcc 7808677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 11687319 - 11687261
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11687319 tttttggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 15546631 - 15546685
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  15546631 aggagaaaacttaggtacaattccttagttgttttttgtatggttcttaactaaa 15546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 21380113 - 21380059
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21380113 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 885381 - 885438
Alignment:
Q  36 tttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  885381 tttaggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 20501710 - 20501759
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  20501710 aaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaa 20501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 3369147 - 3369087
Alignment:
Q  49 ttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||||||||| |||| || ||||||||| |||| ||||||||||||||||||||||||    
T  3369147 ttaggtacaattcgttaggtgcttttcgtatcgttcctaactaaattcaccatgatttcct 3369087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 4239020 - 4238922
Alignment:
Q  45 aaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||   || |||| ||||||||||||| ||||||||||||||||| || ||| || | ||||||||||| ||| ||||||||    
T  4239020 aaacttaggtacaattccttctgtgctttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatcc 4238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 4890653 - 4890599
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||||||||||    
T  4890653 aggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 6433689 - 6433747
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattca 97  Q
    |||| |||||||||||| |||| ||||| || |||||||||||||||||||||||||||    
T  6433689 aggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaattca 6433747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 7808613 - 7808662
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  7808613 aaaacttaggtacaattccttaggtgtttttcgtttggtttttaactaaa 7808662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 6433806 - 6433759
Alignment:
Q  62 cttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||    
T  6433806 cttaggtgcttttcgtatggttcttaactaaattcactatgatttcct 6433759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 107
Target Start/End: Complemental strand, 17279697 - 17279631
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||| ||||||||||||||||| ||||| ||||   ||||| ||||||||||||||||| |||||||||    
T  17279697 taggagaaaacttaggtacaatttcttaggtgtt---cgtatagttcttaactaaattcatcatgatttc 17279631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 20501876 - 20501810
Alignment:
Q  40 ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttc 107  Q
    ||||||||||||| ||||||| ||||| || |||||||||||||||||||||||   |||||||||||    
T  20501876 ggaaaaaacttag-tacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttc 20501810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 93
Target Start/End: Complemental strand, 31764494 - 31764443
Alignment:
Q  42 aaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||||||||||||| |||||||  ||||||||| |||||||||||||    
T  31764494 aaaaaacttaggtacaatttcttagatacttttcgtatagttcttaactaaa 31764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 4179197 - 4179144
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  4179197 aggataaaacttag-tacaattctttaaatgtttttcgtatggttcttaactaaa 4179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 3368989 - 3369038
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||  |||||||||||||| || |||||||||||||||||||||||    
T  3368989 aaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 8091066 - 8091115
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| ||||||||||||| || |||||||||||||||||||||||    
T  8091066 aaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 29608999 - 29609054
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||| |||||||||||||||||| |||  || ||||||| |||||||||||||||    
T  29608999 taggacaaaacttaggtacaattctttaagtgcttttcgtgtggttcttaactaaa 29609054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 13439694 - 13439748
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||  |  ||||||||||||||||| |||||    
T  13439694 aggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaa 13439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 106
Target Start/End: Original strand, 31764353 - 31764391
Alignment:
Q  68 tgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  31764353 tgttttttgtatggttcttaactaaattcaccattattt 31764391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 4076637 - 4076685
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||| ||||    
T  4076637 aaaacttag-tacaattctttaaatgtttttcgtatggttcttaattaaa 4076685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 18998284 - 18998235
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| |||| ||||||||||||| || |||||||||||||||||| ||||    
T  18998284 aaaatttagctacaattccttaggtgcttttcgtatggttcttaattaaa 18998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 14393574 - 14393614
Alignment:
Q  53 gtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaactaaa 14393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 141
Target Start/End: Complemental strand, 48302 - 48194
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaattt 132  Q
    ||||| || ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||| || ||| |||| ||||||||||| |||    
T  48302 ttttaagagaaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagttt 48203  T
Q  133 attatatcc 141  Q
     ||||||||    
T  48202 gttatatcc 48194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 46001 - 45902
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttattatatcc 141  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| || ||| |||| ||||||||||| ||| ||||||||    
T  46001 aaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 45902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 45833 - 45887
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  45833 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 45887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 7259 - 7154
Alignment:
Q  38 taggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatt 135  Q
    ||||| |||| |||||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| ||| ||    
T  7259 taggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgtt 7160  T
Q  136 atatcc 141  Q
    ||||||    
T  7159 atatcc 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 7081 - 7139
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||    
T  7081 ttttaggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 5879 - 5807
Alignment:
Q  39 aggaaaaaacttaggtacaatt--ccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||| |||||||||||||||||  |||||| || |||||||||||||||||||||||||||||||||||||||    
T  5879 aggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcct 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 5698 - 5754
Alignment:
Q  37 ttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||| |||||| ||||||||||| |||| || |||||||||||||||||||||||    
T  5698 ttaggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaa 5754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 51235 - 51131
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcc-taaagccat-attttctcaaaatttatta 136  Q
    |||| ||||||||||||||||||||||| |  ||||| |||||||||||||||||||||| ||||||||| ||||  ||| ||||||||||| ||| |||    
T  51235 aggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgtta 51136  T
Q  137 tatcc 141  Q
    |||||    
T  51135 tatcc 51131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 51062 - 51116
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  51062 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 51116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 3397 - 3462
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct 109  Q
    |||||||||||||||||| || | || |||| ||||||||||||| ||||||||||||||||||||    
T  3397 aaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcct 3462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 14609 - 14552
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccat 101  Q
    ||||||||||||||||||||| | || ||||||||| |||||||||||||||||||||    
T  14609 aaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaattcaccat 14552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 14441 - 14495
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||| ||||||||||    
T  14441 aggagaaaacttaggtacaatttcttaggtgtttttcctatggtacttaactaaa 14495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 72294 - 72354
Alignment:
Q  46 aacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||| ||||    
T  72294 aacttaggtacaattccttagatgctttttgtatgattcttagctaaattcaccataattt 72354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 140
Target Start/End: Original strand, 1938 - 2041
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||| ||||||| ||||  |||| || |||| |||||||||||||||||||||||||||||||||| ||| |||| |||||| |||| ||| |||    
T  1938 aggagaaaatttaggtataattgtttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgtta 2037  T
Q  137 tatc 140  Q
    ||||    
T  2038 tatc 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 2116 - 2058
Alignment:
Q  35 ttttaggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||| ||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  2116 ttttcggagaaaacttaggtacaattccttaggtgctttttatatggttcttaactaaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 26404 - 26458
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||| ||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  26404 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaa 26458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10120 - 10169
Alignment:
Q  44 aaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaa 93  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||||||    
T  10120 aaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaa 10169  T

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Target: scaffold0137; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 10287 - 10183
Alignment:
Q  39 aggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgatttcct-aaagccat-attttctcaaaatttatta 136  Q
    |||| |||| |||||||||||| ||||  || |||||||||  ||||||| ||||||||||||||||| || | | |||| ||||||||||| ||| |||    
T  10287 aggagaaaatttaggtacaatttcttatgtgcttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagtttgtta 10188  T
Q  137 tatcc 141  Q
    |||||    
T  10187 tatcc 10183  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 138287 - 138360
Alignment:
Q  50 taggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatga-tttcctaaagccatatttt 122  Q
    |||||||||||||||||  | |||||||||| |||||||||||||||| ||||| |||| |||| |||||||||    
T  138287 taggtacaattccttaggagcttttcgtatgattcttaactaaattcatcatgattttcttaaatccatatttt 138360  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 94337 - 94277
Alignment:
Q  40 ggaaaaaacttaggtacaattccttagatgtttttcgtatggttcttaactaaattcaccatgattt 106  Q
    |||||||||||||||| ||||||||| ||      | ||||||||||||||||||||||||||||||    
T  94337 ggaaaaaacttaggtaaaattccttaaat------catatggttcttaactaaattcaccatgattt 94277  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 109
Target Start/End: Original strand, 90738 - 90770
Alignment:
Q  77 tatggttcttaactaaattcaccatgatttcct 109  Q
    ||||||||||||||||||| |||||||||||||    
T  90738 tatggttcttaactaaatttaccatgatttcct 90770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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