View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2482_high_5 (Length: 250)
Name: NF2482_high_5
Description: NF2482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2482_high_5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 8185363 - 8185131
Alignment:
| Q |
16 |
ctaccaaagtgtacggagtgatttcttggcccaaaagttactgacttgtgccttgcacatcatatattct-----ccttgaattttaacttaaaagctgt |
110 |
Q |
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| T |
8185363 |
ctaccaaagtgtacggagtgatttcttggcccaaaagttactgacttgtaccctgcacatcatatattctattctccttgaattttaacttaaaagctgt |
8185264 |
T |
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| Q |
111 |
gaaattctcacatggttttgttcaatttgtagctatttctattcttagaaagtttttagtagtgaattggtctttgacccttttattcataaggaaattc |
210 |
Q |
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| T |
8185263 |
gaaattctcaca-------gttcaatttgtagctatttctattcttagaaagtttttagtagtgaattggtctttgacccttttattcataaggaaattc |
8185171 |
T |
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| Q |
211 |
aaaagtaaaggatcaactttcatttgtatacaacttcttt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
8185170 |
aaaagtaaaggatcaactttcatttgtatacaacttcttt |
8185131 |
T |
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