View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2483_high_15 (Length: 250)

Name: NF2483_high_15
Description: NF2483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2483_high_15
NF2483_high_15
[»] chr8 (89 HSPs)
chr8 (1-116)||(30476150-30476265)
chr8 (1-116)||(278508-278623)
chr8 (1-116)||(637229-637344)
chr8 (1-116)||(823032-823147)
chr8 (1-116)||(15881411-15881526)
chr8 (1-116)||(16097389-16097504)
chr8 (1-116)||(17946761-17946876)
chr8 (1-116)||(18957182-18957297)
chr8 (1-116)||(44257836-44257951)
chr8 (1-116)||(38059421-38059537)
chr8 (1-116)||(4621660-4621775)
chr8 (1-116)||(26965542-26965657)
chr8 (1-116)||(41182577-41182691)
chr8 (1-116)||(17852562-17852678)
chr8 (1-116)||(38099040-38099155)
chr8 (1-116)||(38576761-38576876)
chr8 (1-116)||(41181809-41181924)
chr8 (1-116)||(41546627-41546742)
chr8 (3-116)||(13139488-13139601)
chr8 (1-116)||(3703345-3703460)
chr8 (1-116)||(36193192-36193307)
chr8 (1-116)||(6096607-6096723)
chr8 (1-116)||(42737301-42737417)
chr8 (1-68)||(2081544-2081610)
chr8 (185-240)||(4621844-4621899)
chr8 (21-116)||(23345358-23345453)
chr8 (185-240)||(30476332-30476387)
chr8 (185-240)||(36193070-36193125)
chr8 (185-240)||(41546505-41546560)
chr8 (185-240)||(18957059-18957114)
chr8 (185-240)||(23345520-23345575)
chr8 (185-240)||(26965725-26965780)
chr8 (185-240)||(39859612-39859667)
chr8 (185-240)||(41182760-41182815)
chr8 (1-115)||(39859735-39859849)
chr8 (191-240)||(278385-278434)
chr8 (191-240)||(637418-637467)
chr8 (191-240)||(823221-823270)
chr8 (191-240)||(18087865-18087914)
chr8 (1-116)||(3851804-3851919)
chr8 (1-116)||(18087674-18087789)
chr8 (1-68)||(30554883-30554950)
chr8 (185-240)||(45408119-45408174)
chr8 (185-239)||(6096480-6096534)
chr8 (191-240)||(3851133-3851182)
chr8 (191-240)||(3851679-3851728)
chr8 (191-240)||(6095945-6095994)
chr8 (191-240)||(13140228-13140277)
chr8 (191-240)||(15882130-15882179)
chr8 (191-240)||(16096817-16096866)
chr8 (191-240)||(30555578-30555627)
chr8 (191-240)||(38060120-38060169)
chr8 (191-240)||(41545980-41546029)
chr8 (191-240)||(42646454-42646503)
chr8 (191-240)||(43694079-43694128)
chr8 (1-116)||(45407419-45407535)
chr8 (185-240)||(15881594-15881649)
chr8 (185-240)||(16097263-16097318)
chr8 (185-222)||(17946948-17946985)
chr8 (199-240)||(27913543-27913584)
chr8 (199-240)||(27959962-27960003)
chr8 (191-236)||(39859089-39859134)
chr8 (1-115)||(40302591-40302707)
chr8 (199-240)||(41183257-41183298)
chr8 (25-116)||(6095781-6095872)
chr8 (25-68)||(13140358-13140401)
chr8 (25-116)||(36192407-36192498)
chr8 (1-116)||(42647082-42647197)
chr8 (1-67)||(30112009-30112075)
chr8 (11-68)||(3850990-3851047)
chr8 (191-240)||(23346041-23346090)
chr8 (11-116)||(30111699-30111804)
chr8 (199-240)||(40302787-40302828)
chr8 (185-222)||(44257736-44257773)
chr8 (11-68)||(45408275-45408332)
chr8 (12-68)||(11691313-11691369)
chr8 (185-240)||(28085109-28085165)
chr8 (185-240)||(13139665-13139720)
chr8 (12-67)||(29872036-29872091)
chr8 (191-222)||(30111848-30111879)
chr8 (185-220)||(38059606-38059641)
chr8 (185-220)||(40617630-40617665)
chr8 (25-68)||(43694210-43694253)
chr8 (185-222)||(18088430-18088467)
chr8 (12-65)||(30088880-30088933)
chr8 (194-235)||(30476871-30476912)
chr8 (11-68)||(30555732-30555789)
chr8 (23-68)||(40303414-40303459)
chr8 (191-228)||(41182313-41182350)
[»] chr3 (118 HSPs)
chr3 (1-116)||(4231023-4231138)
chr3 (1-116)||(45172483-45172598)
chr3 (1-116)||(18411885-18412000)
chr3 (1-116)||(50546650-50546765)
chr3 (1-109)||(37218346-37218454)
chr3 (1-116)||(2219743-2219858)
chr3 (1-116)||(11123412-11123527)
chr3 (1-116)||(15082887-15083002)
chr3 (1-116)||(27127938-27128053)
chr3 (1-116)||(30438441-30438556)
chr3 (1-116)||(13243343-13243457)
chr3 (1-116)||(23021792-23021908)
chr3 (1-116)||(22606612-22606727)
chr3 (1-116)||(41103492-41103607)
chr3 (1-116)||(47911120-47911235)
chr3 (1-116)||(8849930-8850043)
chr3 (1-116)||(52745823-52745939)
chr3 (2-116)||(16010575-16010688)
chr3 (1-116)||(38698580-38698695)
chr3 (1-116)||(45051913-45052027)
chr3 (1-116)||(31311842-31311956)
chr3 (1-116)||(41696092-41696210)
chr3 (185-240)||(2219621-2219676)
chr3 (185-240)||(8850109-8850164)
chr3 (185-240)||(15083071-15083126)
chr3 (185-240)||(16465553-16465608)
chr3 (185-240)||(23021417-23021472)
chr3 (185-240)||(27127815-27127870)
chr3 (1-116)||(37178408-37178523)
chr3 (185-240)||(37218521-37218576)
chr3 (185-240)||(37787028-37787083)
chr3 (185-240)||(41103369-41103424)
chr3 (185-240)||(47911304-47911359)
chr3 (185-240)||(52746008-52746063)
chr3 (185-240)||(11123287-11123342)
chr3 (185-240)||(18411762-18411817)
chr3 (185-240)||(22606488-22606543)
chr3 (185-240)||(23021503-23021558)
chr3 (185-240)||(23021589-23021644)
chr3 (185-240)||(23021675-23021730)
chr3 (185-240)||(41696433-41696488)
chr3 (185-240)||(45172362-45172417)
chr3 (191-240)||(22427805-22427854)
chr3 (191-240)||(31312547-31312596)
chr3 (191-240)||(38698454-38698503)
chr3 (187-240)||(44841554-44841607)
chr3 (185-240)||(2219100-2219155)
chr3 (185-240)||(3891613-3891668)
chr3 (185-240)||(10826629-10826684)
chr3 (185-240)||(16009904-16009959)
chr3 (185-240)||(27330280-27330335)
chr3 (185-240)||(30362501-30362556)
chr3 (185-240)||(31312021-31312076)
chr3 (25-116)||(40424616-40424707)
chr3 (185-240)||(40907785-40907840)
chr3 (185-240)||(45052073-45052128)
chr3 (185-240)||(50546833-50546888)
chr3 (191-240)||(4231803-4231852)
chr3 (191-240)||(16465043-16465092)
chr3 (191-240)||(22605980-22606029)
chr3 (191-240)||(23020910-23020959)
chr3 (191-240)||(27127299-27127348)
chr3 (191-240)||(30042368-30042417)
chr3 (191-240)||(38236601-38236650)
chr3 (191-240)||(45171500-45171549)
chr3 (191-240)||(47911883-47911932)
chr3 (191-240)||(50547371-50547420)
chr3 (1-49)||(29894592-29894640)
chr3 (5-116)||(51721035-51721147)
chr3 (185-240)||(10826105-10826160)
chr3 (185-239)||(16010451-16010506)
chr3 (185-228)||(30041834-30041877)
chr3 (185-228)||(30438624-30438667)
chr3 (197-240)||(42827635-42827678)
chr3 (1-44)||(50536130-50536173)
chr3 (1-68)||(53776577-53776644)
chr3 (190-240)||(13243219-13243269)
chr3 (198-240)||(53776774-53776816)
chr3 (191-240)||(2584497-2584546)
chr3 (199-240)||(15083619-15083660)
chr3 (191-240)||(37219081-37219130)
chr3 (199-240)||(37786490-37786531)
chr3 (191-240)||(40907250-40907299)
chr3 (191-240)||(41102796-41102845)
chr3 (199-240)||(55412833-55412874)
chr3 (191-235)||(51721729-51721773)
chr3 (1-68)||(3890951-3891018)
chr3 (185-228)||(18763599-18763642)
chr3 (33-116)||(40907909-40907989)
chr3 (185-232)||(42827098-42827145)
chr3 (77-116)||(44841447-44841486)
chr3 (193-236)||(45052602-45052645)
chr3 (2-68)||(55219699-55219765)
chr3 (185-222)||(4231206-4231243)
chr3 (185-238)||(18763045-18763098)
chr3 (191-240)||(30439195-30439244)
chr3 (28-116)||(55412944-55413033)
chr3 (12-68)||(42826930-42826986)
chr3 (12-116)||(53777369-53777473)
chr3 (12-63)||(29835479-29835530)
chr3 (25-68)||(31312680-31312723)
chr3 (1-36)||(40908337-40908372)
chr3 (25-68)||(51721857-51721900)
chr3 (191-240)||(38697933-38697980)
chr3 (19-68)||(10825943-10825992)
chr3 (207-240)||(27328816-27328849)
chr3 (12-65)||(33213749-33213802)
chr3 (191-228)||(37178598-37178635)
chr3 (185-222)||(44842096-44842133)
chr3 (23-68)||(50547532-50547577)
chr3 (80-116)||(2584388-2584424)
chr3 (80-116)||(30361893-30361929)
chr3 (12-68)||(30362652-30362708)
chr3 (191-235)||(33213924-33213968)
chr3 (199-239)||(33214930-33214970)
chr3 (28-68)||(38697811-38697851)
chr3 (80-116)||(42827761-42827797)
chr3 (191-235)||(55219541-55219585)
[»] scaffold0115 (3 HSPs)
scaffold0115 (1-116)||(30465-30580)
scaffold0115 (191-240)||(23081-23130)
scaffold0115 (199-240)||(23626-23667)
[»] chr7 (88 HSPs)
chr7 (1-116)||(21817138-21817253)
chr7 (1-116)||(38179839-38179954)
chr7 (1-116)||(41338060-41338175)
chr7 (1-115)||(44884541-44884655)
chr7 (1-116)||(723665-723780)
chr7 (1-116)||(33244774-33244889)
chr7 (1-116)||(41856449-41856564)
chr7 (1-116)||(47907115-47907230)
chr7 (1-116)||(3412842-3412957)
chr7 (1-116)||(4657190-4657305)
chr7 (1-116)||(16274086-16274201)
chr7 (1-116)||(46553612-46553727)
chr7 (1-116)||(48950410-48950525)
chr7 (1-116)||(20122096-20122211)
chr7 (1-116)||(40013802-40013917)
chr7 (1-114)||(9659185-9659299)
chr7 (1-116)||(44457074-44457188)
chr7 (1-68)||(4861735-4861802)
chr7 (1-68)||(17286500-17286567)
chr7 (185-240)||(723848-723903)
chr7 (185-240)||(21817015-21817070)
chr7 (185-240)||(41337945-41338000)
chr7 (185-240)||(41856633-41856688)
chr7 (185-240)||(44457258-44457313)
chr7 (185-240)||(47907299-47907354)
chr7 (185-240)||(48950585-48950640)
chr7 (185-240)||(3413024-3413079)
chr7 (185-240)||(4657374-4657429)
chr7 (185-240)||(17286667-17286722)
chr7 (1-116)||(17961685-17961800)
chr7 (185-240)||(33244956-33245011)
chr7 (1-116)||(44520307-44520422)
chr7 (185-240)||(44884415-44884470)
chr7 (185-239)||(40013984-40014038)
chr7 (191-240)||(8391797-8391846)
chr7 (191-240)||(19233133-19233182)
chr7 (1-116)||(46001604-46001719)
chr7 (185-240)||(17967162-17967217)
chr7 (1-116)||(23592717-23592832)
chr7 (185-240)||(47504708-47504763)
chr7 (185-240)||(47907842-47907897)
chr7 (185-240)||(48951116-48951171)
chr7 (191-240)||(9659721-9659770)
chr7 (191-240)||(9662472-9662521)
chr7 (191-240)||(20121123-20121172)
chr7 (191-240)||(21737103-21737152)
chr7 (191-240)||(21816505-21816554)
chr7 (191-240)||(33245473-33245522)
chr7 (191-240)||(40014522-40014571)
chr7 (191-240)||(41337407-41337456)
chr7 (191-240)||(41857488-41857537)
chr7 (191-240)||(46554328-46554377)
chr7 (191-240)||(46934597-46934646)
chr7 (191-240)||(48606466-48606515)
chr7 (11-116)||(46934416-46934520)
chr7 (185-240)||(20121972-20122027)
chr7 (1-68)||(21737273-21737340)
chr7 (185-240)||(46001485-46001540)
chr7 (194-240)||(41289032-41289078)
chr7 (1-116)||(47505453-47505570)
chr7 (191-240)||(3414989-3415038)
chr7 (191-240)||(28588444-28588493)
chr7 (185-222)||(38180024-38180061)
chr7 (191-240)||(44458136-44458185)
chr7 (199-240)||(44883850-44883891)
chr7 (191-240)||(46000949-46000998)
chr7 (191-240)||(46935120-46935169)
chr7 (191-239)||(35214462-35214510)
chr7 (185-240)||(48605945-48606000)
chr7 (25-67)||(35214630-35214672)
chr7 (185-222)||(8392321-8392358)
chr7 (191-240)||(23593415-23593463)
chr7 (191-240)||(41288520-41288569)
chr7 (187-240)||(46553798-46553851)
chr7 (199-240)||(48684334-48684375)
chr7 (1-115)||(41287729-41287840)
chr7 (1-45)||(48605864-48605908)
chr7 (1-68)||(241386-241453)
chr7 (12-67)||(13930796-13930851)
chr7 (1-44)||(19233632-19233675)
chr7 (5-68)||(46935291-46935354)
chr7 (191-228)||(17961871-17961908)
chr7 (11-68)||(17967316-17967373)
chr7 (191-228)||(23592904-23592941)
chr7 (191-228)||(47505344-47505381)
chr7 (80-116)||(8391694-8391730)
chr7 (80-116)||(19233255-19233291)
chr7 (28-68)||(48606627-48606667)
[»] chr5 (61 HSPs)
chr5 (1-116)||(12501189-12501304)
chr5 (1-116)||(39590493-39590608)
chr5 (1-116)||(42610083-42610198)
chr5 (1-116)||(9593609-9593725)
chr5 (1-116)||(19666404-19666519)
chr5 (1-116)||(27018300-27018415)
chr5 (1-116)||(30128794-30128909)
chr5 (1-116)||(744251-744366)
chr5 (1-116)||(822996-823111)
chr5 (1-116)||(9985535-9985650)
chr5 (2-116)||(11986378-11986492)
chr5 (1-116)||(20544368-20544482)
chr5 (2-116)||(37938663-37938776)
chr5 (185-240)||(744434-744489)
chr5 (185-240)||(19504714-19504769)
chr5 (185-240)||(37938843-37938898)
chr5 (185-240)||(39590365-39590420)
chr5 (185-240)||(42610268-42610323)
chr5 (187-240)||(30128980-30129033)
chr5 (1-116)||(19504835-19504951)
chr5 (1-116)||(37272497-37272615)
chr5 (185-240)||(823179-823234)
chr5 (185-240)||(9593485-9593540)
chr5 (185-240)||(9986235-9986290)
chr5 (185-240)||(11986253-11986308)
chr5 (185-240)||(19666278-19666333)
chr5 (185-240)||(20544549-20544604)
chr5 (1-116)||(31547640-31547755)
chr5 (1-115)||(11078217-11078331)
chr5 (191-240)||(13304368-13304417)
chr5 (191-240)||(34401852-34401901)
chr5 (191-240)||(37272367-37272416)
chr5 (185-240)||(12501066-12501121)
chr5 (185-240)||(27018483-27018538)
chr5 (185-240)||(31551043-31551098)
chr5 (191-240)||(823711-823760)
chr5 (191-240)||(9592897-9592946)
chr5 (199-240)||(11985751-11985792)
chr5 (185-234)||(27551858-27551907)
chr5 (1-116)||(7179838-7179953)
chr5 (185-240)||(37939375-37939430)
chr5 (191-240)||(7180555-7180604)
chr5 (199-240)||(12500505-12500546)
chr5 (191-240)||(19504129-19504178)
chr5 (191-240)||(19665997-19666046)
chr5 (191-240)||(20545078-20545127)
chr5 (191-240)||(27018998-27019047)
chr5 (191-240)||(37271827-37271876)
chr5 (191-240)||(39589528-39589577)
chr5 (191-240)||(42611132-42611181)
chr5 (191-239)||(1833609-1833657)
chr5 (191-239)||(40319075-40319123)
chr5 (37-116)||(34401976-34402055)
chr5 (28-116)||(11985581-11985669)
chr5 (26-68)||(37271705-37271747)
chr5 (191-240)||(9531531-9531580)
chr5 (23-68)||(13304498-13304543)
chr5 (11-68)||(27551699-27551756)
chr5 (191-228)||(31547834-31547871)
chr5 (28-68)||(9532604-9532644)
chr5 (192-240)||(30129825-30129872)
[»] chr4 (78 HSPs)
chr4 (1-116)||(20352204-20352319)
chr4 (1-116)||(54921157-54921272)
chr4 (1-116)||(3034034-3034149)
chr4 (1-116)||(16666442-16666557)
chr4 (1-116)||(41039750-41039865)
chr4 (1-114)||(8941011-8941125)
chr4 (1-116)||(7489048-7489165)
chr4 (1-116)||(9367061-9367177)
chr4 (1-101)||(17362832-17362932)
chr4 (1-116)||(52449115-52449230)
chr4 (1-116)||(55449620-55449735)
chr4 (1-114)||(13530209-13530323)
chr4 (1-115)||(20785307-20785421)
chr4 (1-116)||(30823864-30823981)
chr4 (1-116)||(4654732-4654848)
chr4 (1-116)||(46719467-46719583)
chr4 (1-116)||(49875499-49875614)
chr4 (185-240)||(16666318-16666373)
chr4 (1-68)||(23417380-23417447)
chr4 (185-240)||(54921034-54921089)
chr4 (185-240)||(4654610-4654665)
chr4 (185-240)||(9367245-9367300)
chr4 (185-240)||(23417681-23417736)
chr4 (1-116)||(23931764-23931879)
chr4 (186-240)||(52448992-52449046)
chr4 (185-240)||(3034217-3034272)
chr4 (185-236)||(8940889-8940940)
chr4 (185-240)||(20785492-20785547)
chr4 (185-240)||(30824049-30824104)
chr4 (185-240)||(34074098-34074153)
chr4 (185-240)||(41039934-41039989)
chr4 (1-116)||(42179997-42180112)
chr4 (185-240)||(55449805-55449860)
chr4 (1-116)||(28172322-28172439)
chr4 (191-240)||(35825610-35825659)
chr4 (191-240)||(35826112-35826161)
chr4 (1-116)||(17519065-17519181)
chr4 (7-115)||(27956708-27956816)
chr4 (193-240)||(17519711-17519758)
chr4 (185-240)||(28172478-28172533)
chr4 (185-240)||(31289743-31289798)
chr4 (1-63)||(31289610-31289672)
chr4 (185-239)||(49875376-49875430)
chr4 (191-240)||(7488370-7488419)
chr4 (191-240)||(9367786-9367835)
chr4 (191-240)||(13530745-13530794)
chr4 (191-240)||(13533496-13533545)
chr4 (191-240)||(17362213-17362262)
chr4 (191-240)||(20342235-20342284)
chr4 (191-240)||(20352960-20353009)
chr4 (191-240)||(27956892-27956941)
chr4 (191-240)||(27958377-27958426)
chr4 (191-240)||(28173003-28173052)
chr4 (191-240)||(52448493-52448542)
chr4 (191-240)||(54920503-54920552)
chr4 (196-240)||(23932478-23932522)
chr4 (1-116)||(34074747-34074861)
chr4 (1-116)||(43304629-43304744)
chr4 (191-240)||(4654077-4654126)
chr4 (199-240)||(20352382-20352423)
chr4 (191-240)||(20786038-20786087)
chr4 (191-240)||(23931949-23931998)
chr4 (191-240)||(30824572-30824621)
chr4 (199-240)||(49874854-49874895)
chr4 (1-68)||(35046048-35046115)
chr4 (191-240)||(16665765-16665814)
chr4 (23-116)||(31291703-31291796)
chr4 (191-240)||(41040450-41040498)
chr4 (199-240)||(46718829-46718870)
chr4 (187-240)||(46719344-46719397)
chr4 (1-45)||(17519863-17519907)
chr4 (1-68)||(13861752-13861819)
chr4 (191-220)||(17519250-17519279)
chr4 (191-240)||(27317779-27317828)
chr4 (191-240)||(31291580-31291629)
chr4 (191-228)||(43304516-43304553)
chr4 (28-68)||(23932612-23932652)
chr4 (28-68)||(55450456-55450496)
[»] chr6 (38 HSPs)
chr6 (1-116)||(16922025-16922140)
chr6 (1-112)||(27784206-27784317)
chr6 (1-114)||(4588041-4588154)
chr6 (1-116)||(953830-953944)
chr6 (1-116)||(5686514-5686629)
chr6 (1-116)||(17557752-17557867)
chr6 (1-116)||(23581989-23582105)
chr6 (185-240)||(11152949-11153004)
chr6 (1-116)||(14105715-14105830)
chr6 (185-240)||(16921900-16921955)
chr6 (185-240)||(17557936-17557991)
chr6 (185-236)||(4588225-4588276)
chr6 (189-240)||(5686701-5686752)
chr6 (185-240)||(14105592-14105647)
chr6 (185-240)||(27784078-27784133)
chr6 (185-240)||(24084219-24084274)
chr6 (1-68)||(24084392-24084459)
chr6 (185-240)||(25120302-25120357)
chr6 (191-240)||(5687190-5687239)
chr6 (191-240)||(11153537-11153586)
chr6 (191-240)||(16919255-16919304)
chr6 (192-240)||(15287993-15288041)
chr6 (185-240)||(23581866-23581921)
chr6 (186-237)||(27440990-27441041)
chr6 (1-68)||(28580273-28580340)
chr6 (191-240)||(14105073-14105122)
chr6 (191-240)||(25119749-25119798)
chr6 (25-116)||(23573990-23574081)
chr6 (5-116)||(25120422-25120533)
chr6 (191-240)||(4588774-4588823)
chr6 (79-116)||(11152843-11152880)
chr6 (191-239)||(944622-944670)
chr6 (25-68)||(11153738-11153781)
chr6 (185-240)||(954013-954064)
chr6 (206-240)||(11836521-11836555)
chr6 (191-232)||(15287823-15287864)
chr6 (28-68)||(954683-954723)
chr6 (192-228)||(27441505-27441541)
[»] chr2 (57 HSPs)
chr2 (1-116)||(3905085-3905200)
chr2 (1-116)||(14004191-14004306)
chr2 (1-116)||(4736891-4737004)
chr2 (1-116)||(25761329-25761444)
chr2 (1-116)||(38280437-38280552)
chr2 (1-116)||(15154289-15154404)
chr2 (1-116)||(2290567-2290682)
chr2 (1-116)||(25225166-25225280)
chr2 (1-115)||(75750-75866)
chr2 (1-114)||(39067217-39067329)
chr2 (185-240)||(75937-75992)
chr2 (185-240)||(3905268-3905323)
chr2 (185-240)||(14004374-14004429)
chr2 (185-240)||(15154165-15154220)
chr2 (185-240)||(25761514-25761569)
chr2 (185-240)||(45136203-45136258)
chr2 (185-239)||(4737074-4737128)
chr2 (185-240)||(42079216-42079271)
chr2 (3-116)||(1053313-1053427)
chr2 (185-238)||(1053494-1053547)
chr2 (191-240)||(6646720-6646769)
chr2 (191-240)||(15400582-15400631)
chr2 (191-240)||(39773566-39773615)
chr2 (185-240)||(3905790-3905845)
chr2 (1-116)||(6647027-6647142)
chr2 (185-240)||(27550510-27550565)
chr2 (185-240)||(38280621-38280676)
chr2 (185-240)||(38281147-38281202)
chr2 (191-240)||(76514-76563)
chr2 (191-240)||(1054021-1054070)
chr2 (191-240)||(3753320-3753369)
chr2 (191-240)||(15153677-15153726)
chr2 (191-240)||(25225043-25225092)
chr2 (191-235)||(7575286-7575330)
chr2 (191-240)||(2290752-2290801)
chr2 (191-240)||(6646183-6646232)
chr2 (186-235)||(39067924-39067973)
chr2 (11-116)||(39068006-39068111)
chr2 (187-240)||(39965505-39965558)
chr2 (1-68)||(28390129-28390196)
chr2 (77-116)||(39965405-39965444)
chr2 (1-116)||(3753179-3753292)
chr2 (1-43)||(39965357-39965399)
chr2 (1-116)||(42079034-42079147)
chr2 (191-240)||(37724390-37724439)
chr2 (191-240)||(39067401-39067450)
chr2 (1-68)||(7575453-7575520)
chr2 (12-67)||(12522409-12522464)
chr2 (25-68)||(15153505-15153548)
chr2 (1-68)||(15400750-15400817)
chr2 (185-222)||(3850130-3850167)
chr2 (207-240)||(3850170-3850203)
chr2 (11-68)||(27550664-27550721)
chr2 (185-222)||(42079791-42079828)
chr2 (80-116)||(3850023-3850059)
chr2 (191-219)||(15400054-15400082)
chr2 (80-116)||(15400698-15400734)
[»] chr1 (58 HSPs)
chr1 (1-116)||(31031844-31031959)
chr1 (1-116)||(33706333-33706448)
chr1 (1-116)||(44510597-44510712)
chr1 (1-116)||(30837936-30838050)
chr1 (23-116)||(10774508-10774601)
chr1 (1-112)||(21097160-21097272)
chr1 (1-116)||(7154626-7154741)
chr1 (1-116)||(51088404-51088519)
chr1 (185-240)||(7154501-7154556)
chr1 (1-116)||(14535529-14535643)
chr1 (1-116)||(7557287-7557404)
chr1 (186-240)||(14535713-14535767)
chr1 (185-240)||(30838119-30838174)
chr1 (185-240)||(31031722-31031777)
chr1 (185-239)||(10774388-10774442)
chr1 (191-240)||(25656927-25656976)
chr1 (191-240)||(33004832-33004881)
chr1 (185-240)||(33705692-33705747)
chr1 (185-240)||(35955961-35956016)
chr1 (1-68)||(36732309-36732376)
chr1 (185-240)||(51088287-51088342)
chr1 (1-115)||(29520402-29520516)
chr1 (191-240)||(7154021-7154070)
chr1 (191-240)||(10773830-10773879)
chr1 (191-240)||(14536274-14536323)
chr1 (191-240)||(29648426-29648475)
chr1 (191-240)||(35955479-35955528)
chr1 (1-115)||(35956085-35956198)
chr1 (191-240)||(36731727-36731776)
chr1 (191-240)||(44511291-44511340)
chr1 (196-240)||(46123322-46123366)
chr1 (1-116)||(29647748-29647863)
chr1 (185-240)||(29647916-29647971)
chr1 (1-116)||(30301175-30301290)
chr1 (185-235)||(7557172-7557222)
chr1 (185-235)||(29520584-29520634)
chr1 (199-240)||(14487682-14487723)
chr1 (187-228)||(21097042-21097083)
chr1 (199-240)||(36732226-36732267)
chr1 (191-240)||(52405687-52405736)
chr1 (191-240)||(52407120-52407169)
chr1 (199-239)||(48128834-48128874)
chr1 (23-68)||(51087655-51087700)
chr1 (191-240)||(51087783-51087832)
chr1 (191-235)||(47035797-47035841)
chr1 (191-222)||(29520917-29520948)
chr1 (191-222)||(30301376-30301407)
chr1 (185-239)||(33706209-33706264)
chr1 (185-220)||(44510780-44510815)
chr1 (191-240)||(46119317-46119363)
chr1 (77-116)||(48129445-48129484)
chr1 (1-116)||(12769396-12769509)
chr1 (191-228)||(12769281-12769318)
chr1 (11-68)||(25656763-25656820)
chr1 (12-65)||(47035961-47036014)
chr1 (191-228)||(48129334-48129371)
chr1 (28-68)||(29521031-29521071)
chr1 (199-239)||(47035065-47035105)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-116)||(56267-56382)
[»] scaffold0208 (3 HSPs)
scaffold0208 (1-116)||(4037-4152)
scaffold0208 (196-234)||(4719-4757)
scaffold0208 (191-228)||(4227-4264)
[»] scaffold0259 (3 HSPs)
scaffold0259 (185-240)||(4558-4613)
scaffold0259 (1-68)||(4373-4440)
scaffold0259 (196-232)||(4863-4899)
[»] scaffold0003 (2 HSPs)
scaffold0003 (186-237)||(46320-46371)
scaffold0003 (192-228)||(45820-45856)


Alignment Details
Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 89)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30476150 - 30476265
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  30476150 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 30476249  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30476250 aaagcacatatacatc 30476265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 278623 - 278508
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||        | ||||||||||||| ||||||||    
T  278623 ttatagacatgattacattatagatcctttatcttatttatttgttacattttggtcctttatctttatttttttccacttaggtcttttatctcttata 278524  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  278523 aaagcacatatacatc 278508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 637229 - 637344
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||        | ||||||||||||| ||||||||    
T  637229 ttatagacatgattacattatagatcctttatcttatttatttgttacattttggtcctttatctttatttttttccacttaggtcttttatctcttata 637328  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  637329 aaagcacatatacatc 637344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 823032 - 823147
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||        | ||||||||||||| ||||||||    
T  823032 ttatagacatgattacattatagatcctttatcttatttatttgttacattttggtcctttatctttatttttttccacttaggtcttttatctcttata 823131  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  823132 aaagcacatatacatc 823147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15881411 - 15881526
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||| || |||||||| ||||||||    
T  15881411 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttattttttttcgcatatgtcttttatctcttata 15881510  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  15881511 aaagcacatatacatc 15881526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16097504 - 16097389
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||| ||||||||    
T  16097504 ttataaacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttagatcttttatctcttata 16097405  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  16097404 aaagcacatatacatc 16097389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17946761 - 17946876
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  17946761 ttattgacatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 17946860  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  17946861 aaagcacatatacatc 17946876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18957297 - 18957182
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||| ||||||||    
T  18957297 ttatagacatgattacattagagatcttttatcttatttatttgttacacttgggtcatttatctttatttttttccgcttaggtcttttatctcttata 18957198  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  18957197 aaagcacatatacatc 18957182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44257951 - 44257836
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| |||||| |    
T  44257951 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttctttccgcttaggtcttttatctcttaaa 44257852  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||| ||||    
T  44257851 aaagcacatatccatc 44257836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38059421 - 38059537
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||         |||||| |||||||| |||||||    
T  38059421 ttatagacatgattacattagagatccgttatcttatttatttgttacatttgggtcctttatctttattttttttccgcttaagtcttttatctcttat 38059520  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  38059521 aaaagcacatatacatc 38059537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4621660 - 4621775
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||| |||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  4621660 ttataaacatcattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttattttttcccgcttaggtcttttatctcttata 4621759  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  4621760 aaagcacatatacatc 4621775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26965542 - 26965657
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  26965542 ttatagacatgattatattggagatcctttattttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 26965641  T
Q  101 aaagcacatatacatc 116  Q
    ||||||| ||||||||    
T  26965642 aaagcacgtatacatc 26965657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41182577 - 41182691
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||| ||||||| ||||||||    
T  41182577 ttatagacatgattacattagagatcatttatcttatttatttgttacacttgggtcctttatcttta-tttttttcgcttagatcttttatctcttata 41182675  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41182676 aaagcacatatacatc 41182691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17852562 - 17852678
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||         ||||||||||||||| |||||||    
T  17852562 ttatagatatgattacattagagatcctttatcttatttatttgttacacttgggtcatttatctttattttttttccgcttaggtcttttatctcttat 17852661  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  17852662 aaaagcacatatacatc 17852678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38099155 - 38099040
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||    
T  38099155 ttatagacatgattacattagaggtcctttatcttatttatttgtaacaatttggtcctttatctttatatttttccgtttaggtcttttatctcttata 38099056  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  38099055 aaagcacatatacatc 38099040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38576761 - 38576876
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||||||        || |||||||||||| ||| ||||    
T  38576761 ttatagacatgattacatttgagatcctttatcttatttatttgtgacattttggtcctttatctttatttttttccgtttaggtcttttatctcatata 38576860  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  38576861 aaagcacatatacatc 38576876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41181809 - 41181924
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| |||| |||    
T  41181809 ttatagacatgattacattagagatcctttatcttatttatttgtaacactttggtcctttatctttattttttttcgtttaggtcttttatctctcata 41181908  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41181909 aaagcacatatacatc 41181924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41546742 - 41546627
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| | || |||||||||||||||        | ||||||||||||| ||||||||    
T  41546742 ttatagacatgattacattataggtcctttatcttatttatttgttatacttcggtcctttatctttatttttttccacttaggtcttttatctcttata 41546643  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41546642 aaagcacatatacatc 41546627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 13139488 - 13139601
Alignment:
Q  3 atagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaa 102  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||| || |||||||||||||||        || |||| ||||||| ||||||||||    
T  13139488 atagacatgattacattagagatcttttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttagatcttttatctcttataaa 13139587  T
Q  103 agcacatatacatc 116  Q
    ||||||||||||||    
T  13139588 agcacatatacatc 13139601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3703345 - 3703460
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| ||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  3703345 ttatagatatgattatattagagatcttttatcttatttattttttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 3703444  T
Q  101 aaagcacatatacatc 116  Q
    ||| ||  ||||||||    
T  3703445 aaaacatgtatacatc 3703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 36193307 - 36193192
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||||||||  |||||| || |||||||||||||||||||||| ||| ||||||||||||||        || |||||||||||| ||||||||    
T  36193307 ttatagacatgattaccttagaggtcatttatcttatttatttgttacacttgagtcctttatctttatttttttccgtttaggtcttttatctcttata 36193208  T
Q  101 aaagcacatatacatc 116  Q
    | ||||||||||||||    
T  36193207 agagcacatatacatc 36193192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6096723 - 6096607
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatc-tttannnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||| ||| ||| |||||| |||         ||||||||||||||| |||||||    
T  6096723 ttatagacatgattacattagaggtcatttatcttatttatttgttacacttgagtcatttatcttttttttttttccgcttaggtcttttatctcttat 6096624  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  6096623 aaaagcacatatacatc 6096607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42737417 - 42737301
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||||||  ||||||||||||||         || |||||||||||| |||||||    
T  42737417 ttatagacatgattacattagaggtcatttatcttatttatttgtaacattttagtcctttatctttatttttttttcgtttaggtcttttatctcttat 42737318  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  42737317 aaaagcacatatacatc 42737301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2081544 - 2081610
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  2081544 ttatagacatgattacattagagatcctttatcttatttatttgttacactt-ggtcctttatcttta 2081610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4621844 - 4621899
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4621844 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 4621899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 23345358 - 23345453
Alignment:
Q  21 gagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||        ||||||||||||||| |||||||||||||| |||||||||    
T  23345358 gagatcttttatcttatttatttgttacacttgggttctttatctttatttttttccgcttaggtcttttatctcttataaaagcatatatacatc 23345453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 30476332 - 30476387
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30476332 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 30476387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 36193125 - 36193070
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36193125 tgaaacaaatccataaatatgatgaagatgttcatcattttcatcttcttcctttg 36193070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 41546560 - 41546505
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41546560 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41546505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 18957114 - 18957059
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  18957114 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttattcctttg 18957059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 23345520 - 23345575
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  23345520 tgaaacaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 23345575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 26965725 - 26965780
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26965725 tgaaacaaatccagaaatatgatgaagatgttgatcatcttcatcttcttcctttg 26965780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 39859667 - 39859612
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39859667 tgaaaaaaatccagaaatatgatgaagatgttcatcatattcatcttcttcctttg 39859612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 41182760 - 41182815
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  41182760 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatctttttcctttg 41182815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 39859849 - 39859735
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||| |||||| |||  ||||||||||        |  |||||||||||| ||||||||    
T  39859849 ttatagacatgattacattagatgtcctttttcttatttatttgtaacattttggtattttatctttatttttttccatttaggtcttttatctcttata 39859750  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  39859749 aaagcacatatacat 39859735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 278434 - 278385
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  278434 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 278385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 637418 - 637467
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  637418 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 637467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 823221 - 823270
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  823221 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 18087865 - 18087914
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18087865 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 18087914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3851919 - 3851804
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||| ||| ||   |||||||||||||        |  |||| ||||||| ||||||||    
T  3851919 ttatagacatgattacattagaggtcctttttcttatttatttgtaacacttttctcctttatctttatttttttccctttagctcttttatctcttata 3851820  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  3851819 aaagcacatatacatc 3851804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18087674 - 18087789
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| |||| || || |||||||||||||||||| ||| || |||||||||||||||        || ||| |||||||| |||| |||    
T  18087674 ttatagacaagattacattaaaggtcttttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttatgtcttttatctctcata 18087773  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  18087774 aaagcacatatacatc 18087789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30554883 - 30554950
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  30554883 ttatagacaggattacattagaggtcctttatcttatttatttgtaacactttggtcctttatcttta 30554950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 45408174 - 45408119
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  45408174 tgaaaaaaatccagaaatacgatgaagatgttcatcatcttcatcttcttcctttg 45408119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 6096534 - 6096480
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  6096534 tgaaataaatccagaaatatgatgaagatgttcatcatcttcatcttctttcttt 6096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 3851133 - 3851182
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  3851133 aaatccagaaatataatgaagatgttcatcatcttcatcttcttcctttg 3851182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 3851728 - 3851679
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  3851728 aaatccagaaatatgatgaagatgttcatcatcttcgtcttcttcctttg 3851679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 6095945 - 6095994
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  6095945 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 6095994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 13140277 - 13140228
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  13140277 aaatgcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 13140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 15882179 - 15882130
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15882179 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15882130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 16096817 - 16096866
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16096817 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16096866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 30555627 - 30555578
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  30555627 aaatccataaatatgatgaagatgttcatcatcttcatcttcttcctttg 30555578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 38060169 - 38060120
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38060169 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 38060120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 41545980 - 41546029
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41545980 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41546029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 42646454 - 42646503
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  42646454 aaatccagaaatatgatgaagatgttcatcatctgcatcttcttcctttg 42646503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 43694128 - 43694079
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43694128 aaatgcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 43694079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45407419 - 45407535
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||| ||||| ||||||| || | |||||||||||||||| ||| || |||||||||||||||         || |||||||||||| |||| ||    
T  45407419 ttatagacaggattacattagaggtcttctatcttatttatttgtaacactttggtcctttatctttattttttttccgtttaggtcttttatctctcat 45407518  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  45407519 aaaagcacatatacatc 45407535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 15881594 - 15881649
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||    
T  15881594 tgaaacaaatccataaatatgatgaatatgttcatcatcttcatgttcttcctttg 15881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 16097318 - 16097263
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||    
T  16097318 tgaaacaaattcagaaatatcatgaagattttcatcatcttcatcttcttcctttg 16097263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 17946948 - 17946985
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17946948 tgaaacaaatccagaaatatgatgaagatgttcatcat 17946985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 27913543 - 27913584
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27913543 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 27913584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 27959962 - 27960003
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27959962 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 27960003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 39859089 - 39859134
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcc 236  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||    
T  39859089 aaatcaagaaatatgatgaagatgttcatcatcttcatcttcttcc 39859134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40302591 - 40302707
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||| |||||| | |  ||||||||||          || |||||||||||| ||||||    
T  40302591 ttatagacatgattacattagatgtcctttttcttatttatttgtaacattttgttattttatctttatttttttttccgtttaggtcttttatctctta 40302690  T
Q  99 taaaagcacatatacat 115  Q
    |||||||||||||||||    
T  40302691 taaaagcacatatacat 40302707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 41183298 - 41183257
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  41183298 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 41183257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 6095781 - 6095872
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||||||||| |||| | |||||||||||||||        || ||||||| |||| ||||  ||||||||||||||||||    
T  6095781 tcctttatcttatttatttgtaacatgttggtcctttatctttattttttcccgtttaggtcctttatctctcttaaaagcacatatacatc 6095872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 13140401 - 13140358
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  13140401 tcctttatcttatttatttgttacactttggtcctttatcttta 13140358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 36192407 - 36192498
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||||||||| ||| || |||||||||||||||        || ||||||| |||| ||||  ||||||||||||||||||    
T  36192407 tcctttatcttatttatttgtaacactttggtcctttatctttattttttcccgtttaggtcctttatctctcttaaaagcacatatacatc 36192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42647197 - 42647082
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||| |||| || |||| || |||||||||||||||||| | | ||  |||| |||||||||        || |||||||||||| |||| |||    
T  42647197 ttatagacataattacatcagaggtcttttatcttatttatttgtaaaactttagtccattatctttatttttttccgtttaggtcttttatctctcata 42647098  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  42647097 aaagcacatatacatc 42647082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30112075 - 30112009
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttt 67  Q
    |||||||||  |||| | ||||| ||||||||||||||||||||| ||| || ||||||||||||||    
T  30112075 ttatagacaatattacactagaggtcctttatcttatttatttgtaacactttggtcctttatcttt 30112009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 3850990 - 3851047
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| |||| || |||||||||||||||||| || |||||||| |||||||||||||    
T  3850990 gattacattataggtcctttatcttatttattcgtaacatttggttcctttatcttta 3851047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 23346090 - 23346041
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||| ||||    
T  23346090 aaatccaaaaatatgatgaagttgttcatcatcttcatcttcttcttttg 23346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 30111699 - 30111804
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacata 110  Q
    ||||| ||||| | ||| ||||||||||||||||| ||| || |||||||||||||||        |||||||||| |||| ||||  |||||||||||     
T  30111699 gattacattaggggtccattatcttatttatttgtaacactttggtcctttatctttatttttccccgcttaggtcctttatctctcttaaaagcacatg 30111798  T
Q  111 tacatc 116  Q
    ||||||    
T  30111799 tacatc 30111804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 40302787 - 40302828
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  40302787 aaatatgatgaagatattcatcatcttcatcttcttcctttg 40302828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 44257773 - 44257736
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44257773 tgaaacaaatccaaaaatatgatgaagatgttcatcat 44257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 45408332 - 45408275
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| | ||||||||||||||||||||| |||||| | |||||||||||||    
T  45408332 gattacattaggggtcctttatcttatttatttgtaacattttgatcctttatcttta 45408275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 11691369 - 11691313
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| ||||| ||||||||||||||||||||| ||||| || |||| ||||||||||    
T  11691369 attacattagggatcctttatcttatttatttattacagtttggtcatttatcttta 11691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 28085109 - 28085165
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaa-gatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| |||||||||||| || |||||||||||| |||||||||||||||||    
T  28085109 tgaaaaaaattcagaaatatgataaaagatgttcatcatcttcatcttcttcctttg 28085165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 13139665 - 13139720
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||  ||||| |||||||| ||||||||    
T  13139665 tgaaaaaaattcagaaatatgatgaagatgtctatcatcttcatcttattcctttg 13139720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 29872036 - 29872091
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttt 67  Q
    |||| ||||| | ||||||||||||||||||||| ||| || ||||||||||||||    
T  29872036 attacattaggggtcctttatcttatttatttgtaacactttggtcctttatcttt 29872091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 30111879 - 30111848
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||||||||||||||||||||||    
T  30111879 aaatccagaaatatgatgaagatgttcatcat 30111848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 38059606 - 38059641
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatc 220  Q
    |||||||||||||||||||||| |||||||||||||    
T  38059606 tgaaacaaatccagaaatatgacgaagatgttcatc 38059641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 40617630 - 40617665
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatc 220  Q
    ||||| ||||||||||||||||||||||||||||||    
T  40617630 tgaaaaaaatccagaaatatgatgaagatgttcatc 40617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 43694253 - 43694210
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||||||| || | |||||||||||||    
T  43694253 tcctttatcttatttatttgttacactttgatcctttatcttta 43694210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 18088467 - 18088430
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  18088467 tgaaaaaaattcagaaatatgatgaagatgttcatcat 18088430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 30088933 - 30088880
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatct 65  Q
    |||| ||||||| || |||||||||||||||||| ||| || ||||||||||||    
T  30088933 attatattagaggtcgtttatcttatttatttgtaacactttggtcctttatct 30088880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 30476912 - 30476871
Alignment:
Q  194 tccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    |||| |||||||||||||||||||||||| |||||| |||||    
T  30476912 tccaaaaatatgatgaagatgttcatcatcttcatcatcttc 30476871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 30555789 - 30555732
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| | ||||||||||||||||||||| ||| || | |||||||||||||    
T  30555789 gattacattaggggtcctttatcttatttatttgtaacactttgatcctttatcttta 30555732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 40303459 - 40303414
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| |||||||||||||||||| ||| || |||||||||||||||    
T  40303459 gatcttttatcttatttatttgtaacactttggtcctttatcttta 40303414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 41182313 - 41182350
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  41182313 aaatccagaattatgatgaagatgttcatcatcttcat 41182350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 118)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4231023 - 4231138
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||        ||||||||||||||| ||||||||    
T  4231023 ttatagacatgattacattagagatcctttatcttatttatttgttacatttgggttctttatctttatttttttccgcttaggtcttttatctcttata 4231122  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  4231123 aaagcacatatacatc 4231138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 45172598 - 45172483
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  45172598 ttatagacatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 45172499  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  45172498 aaagcacatatacatc 45172483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18412000 - 18411885
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||        ||||||| ||||||| ||||||||    
T  18412000 ttatagacatgattacattagagatcctttatcttatttatttgttacatttaagtcctttatctttatttttttccgcttagatcttttatctcttata 18411901  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  18411900 aaagcacatatacatc 18411885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 50546650 - 50546765
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||        ||||||||||||||| ||||||||    
T  50546650 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgagtcctttatctttatttttttccgcttaggtcttttatctcttata 50546749  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||| ||||    
T  50546750 aaagcacatattcatc 50546765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 37218346 - 37218454
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| |||||||| || |||||    
T  37218346 ttatagacatgattacattagagatcctttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaagtcttttatctattata 37218445  T
Q  101 aaagcacat 109  Q
    |||||||||    
T  37218446 aaagcacat 37218454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2219858 - 2219743
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||| ||| ||||||||||        ||||||||||||||| ||||||||    
T  2219858 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgagtcttttatctttatttttttccgcttaggtcttttatctcttata 2219759  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  2219758 aaagcacatatacatc 2219743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11123527 - 11123412
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||        |||||| |||||||| ||||||||    
T  11123527 ttatagacatgattacattagagatcctttattttatttatttgttacacttgggtcttttatctttatttttttccgcttaagtcttttatctcttata 11123428  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  11123427 aaagcacatatacatc 11123412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15082887 - 15083002
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| || |||| ||||||||||        ||||||||||||||| ||||||||    
T  15082887 ttatagacatgattacattagagatcatttatcttatttatttgttacactttggtcatttatctttatttttttccgcttaggtcttttatctcttata 15082986  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  15082987 aaagcacatatacatc 15083002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27128053 - 27127938
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  27128053 ttatagacatgtttacgttagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccacttaggtcttttatctcttata 27127954  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  27127953 aaagcacatatacatc 27127938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30438441 - 30438556
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||| ||||        ||||||||||||||| ||||||||    
T  30438441 ttatagacatgattacattagagatcatttatcttatttatttgttacacttggatcctttatatttatttttttccgcttaggtcttttatctcttata 30438540  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30438541 aaagcacatatacatc 30438556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13243457 - 13243343
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  13243457 ttatagacatgattacattagaaatcatttatcttatttatttgttacacttgggtcctttatcttta-ttttttccgcttaggtcttttatctcttata 13243359  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  13243358 aaagcacatatacatc 13243343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23021908 - 23021792
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||         ||||||||||||||| |||||||    
T  23021908 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgagtcctttatctttatttttttttcgcttaggtcttttatctcttat 23021809  T
Q  100 aaaagcacatatacatc 116  Q
    |||| ||||||||||||    
T  23021808 aaaaacacatatacatc 23021792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22606727 - 22606612
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  22606727 ttatagacatgattatattacggatcctttatcttatttatttgttacacttgggtcctttatctttatttttttcctcttaggtcttttatctcttata 22606628  T
Q  101 aaagcacatatacatc 116  Q
    ||| ||||||||||||    
T  22606627 aaaacacatatacatc 22606612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41103607 - 41103492
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||| ||||||||||        ||||||||||||||| ||||| ||    
T  41103607 ttatagacatgattacattagagatcttttatgttatttatttgttacacttgggtcatttatctttatttttttccgcttaggtcttttatctcttcta 41103508  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41103507 aaagcacatatacatc 41103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47911120 - 47911235
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||| |||| |||||||||| ||||||||||||||||| |||| || |||||||||||||||        ||||||||||||||| ||||||||    
T  47911120 ttatagacataattacattagagatcatttatcttatttatttgatacactttggtcctttatctttatttttttccgcttaggtcttttatctcttata 47911219  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  47911220 aaagcacatatacatc 47911235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8849930 - 8850043
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||  |||||||||||||||| ||||||||||||| ||||||||||        |||||| |||||||| ||||||||    
T  8849930 ttatagacatgattacattagagat--tttatcttatttatttattacatttgggtcttttatctttatttttttccgcttaagtcttttatctcttata 8850027  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  8850028 aaagcacatatacatc 8850043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52745823 - 52745939
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||| || |||||||||||||||         ||||||||||||||| |||||||    
T  52745823 ttatagacatgattacattggagatcatttatcttatttatttgttacacttaggtcctttatctttattttttttccgcttaggtcttttatctcttat 52745922  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  52745923 aaaagcacatatacatc 52745939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 16010688 - 16010575
Alignment:
Q  2 tatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataa 101  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||        || |||||| ||||| |||||||||    
T  16010688 tatagacatgattacattagagatcctttatcttatttatttattacacttgggtcttttatctttatttttttccgtttaggt-ttttatctcttataa 16010590  T
Q  102 aagcacatatacatc 116  Q
    |||||||||||||||    
T  16010589 aagcacatatacatc 16010575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38698695 - 38698580
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||| || | |||||||||||||        || |||||||||||| ||||||||    
T  38698695 ttatagacatgattacattagaggtcatttatcttatttatttgtaacactttgatcctttatctttattttttttcgtttaggtcttttatctcttata 38698596  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  38698595 aaagcacatatacatc 38698580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45051913 - 45052027
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||| |||||||| |||||||||||||||||||| |||||||||||| ||||||| ||||||||||        ||||||||||| ||| ||||||||    
T  45051913 ttataggcatgattacattagagatcctttatctta-ttatttgttacacttgggtcttttatctttatttttttccgcttaggtctgttatctcttata 45052011  T
Q  101 aaagcacatatacatc 116  Q
    ||| ||||||||||||    
T  45052012 aaaacacatatacatc 45052027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31311842 - 31311956
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||    
T  31311842 ttatagacatgattacattagaggtcctttttcttatttatttgtaacactttggtcctttatcttta-tttttttcgtttaggtcttttatctcttata 31311940  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  31311941 aaagcacatatacatc 31311956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41696092 - 41696210
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta---nnnnnnnncgcttaggtcttttacctctt 97  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||           ||||||| ||||||| |||||    
T  41696092 ttatagacatgattgcattagagatcttttatcttatttatttgttacacttgggtcctttatctttattttttttttccgcttagatcttttatctctt 41696191  T
Q  98 ataaaagcacatatacatc 116  Q
    ||||||||| |||||||||    
T  41696192 ataaaagcatatatacatc 41696210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 2219676 - 2219621
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2219676 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 2219621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 8850109 - 8850164
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8850109 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 8850164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 15083071 - 15083126
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15083071 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15083126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 16465608 - 16465553
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16465608 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16465553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23021472 - 23021417
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23021472 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 23021417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 27127870 - 27127815
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27127870 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 27127815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37178408 - 37178523
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| || | | |    
T  37178408 ttatagacatgattacattagaggtcctttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttaggtcttttatctttcaca 37178507  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  37178508 aaagcacatatacatc 37178523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 37218521 - 37218576
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37218521 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 37218576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 37787083 - 37787028
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37787083 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 37787028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 41103424 - 41103369
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41103424 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41103369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 47911304 - 47911359
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47911304 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 47911359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 52746008 - 52746063
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52746008 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 52746063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 11123342 - 11123287
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11123342 tgaaacaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 11123287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 18411817 - 18411762
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18411817 tgaaagaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 18411762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 22606543 - 22606488
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  22606543 tgaaacaaatccggaaatatgatgaagatgttcatcatcttcatcttcttcctttg 22606488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23021558 - 23021503
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23021558 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatctttttcctttg 23021503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23021644 - 23021589
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23021644 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatctttttcctttg 23021589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23021730 - 23021675
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  23021730 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatctttttcctttg 23021675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 41696433 - 41696488
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41696433 tgaaacaaatccataaatatgatgaagatgttcatcatcttcatcttcttcctttg 41696488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 45172417 - 45172362
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  45172417 tgaaacaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 45172362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 22427854 - 22427805
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22427854 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 22427805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 31312596 - 31312547
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31312596 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 31312547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 38698503 - 38698454
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38698503 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 38698454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 44841554 - 44841607
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  44841554 aaacaaatccagaaatatgatgaagatgttcatcatcttcatcttctttctttg 44841607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 2219100 - 2219155
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2219100 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 2219155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3891668 - 3891613
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  3891668 tgaaaaaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 3891613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 10826684 - 10826629
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  10826684 tgaaaaaaatctagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 10826629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 16009904 - 16009959
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16009904 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16009959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 27330280 - 27330335
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27330280 tgaaataaatccagaaatatgatgaagatattcatcatcttcatcttcttcctttg 27330335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 30362556 - 30362501
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  30362556 tgaaaaaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 30362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 31312021 - 31312076
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  31312021 tgaaaaaaatctagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 31312076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 40424707 - 40424616
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||||||||| ||||||||    
T  40424707 tcctttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttaggtcttttatctcttataaaagcacgtatacatc 40424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 40907840 - 40907785
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  40907840 tgaaataaatccagaaatatgatgaagatgttcataatcttcatcttcttcctttg 40907785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 45052073 - 45052128
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| || |||||||||||||||||||||||| |||||||||||||||||    
T  45052073 tgaaacaaattcaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 45052128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 50546833 - 50546888
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  50546833 tgaaacaaatctagaaatacgatgaagatgttcatcatcttcatcttcttcctttg 50546888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 4231852 - 4231803
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  4231852 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 4231803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 16465043 - 16465092
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16465043 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16465092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 22605980 - 22606029
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  22605980 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 22606029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 23020910 - 23020959
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  23020910 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 23020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 27127299 - 27127348
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  27127299 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 27127348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 30042417 - 30042368
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  30042417 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 30042368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 38236601 - 38236650
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38236601 aaatccataaatatgatgaagatgttcatcatcttcatcttcttcctttg 38236650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 45171500 - 45171549
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  45171500 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 45171549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 47911932 - 47911883
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  47911932 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 47911883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 50547420 - 50547371
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  50547420 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 50547371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29894640 - 29894592
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttaca 49  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  29894640 ttatagacatgattacattagagatcctttattttatttatttgttaca 29894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 51721035 - 51721147
Alignment:
Q  5 agacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnnc-gcttaggtcttttacctcttataaaa 103  Q
    ||||||||||| ||||||| |||||||||||| |||||||| | | || || ||||||||||||        | | |||||||||||| |||||||||||    
T  51721035 agacatgattacattagaggtcctttatcttacttatttgtaaaactttggccctttatctttattttttttccgtttaggtcttttatctcttataaaa 51721134  T
Q  104 gcacatatacatc 116  Q
    |||||||||||||    
T  51721135 gcacatatacatc 51721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 10826105 - 10826160
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  10826105 tgaaaaaaatccagaaatttgaagaagatgttcatcatcttcatcttcttcctttg 10826160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 16010506 - 16010451
Alignment:
Q  185 tgaaacaaatccagaaatatg-atgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  16010506 tgaaacaaatccataaatatgcatgaagatgttcatcatcttcatcttcttccttt 16010451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 30041834 - 30041877
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  30041834 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcat 30041877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 30438624 - 30438667
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  30438624 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcat 30438667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 42827678 - 42827635
Alignment:
Q  197 agaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  42827678 agaaatatgatgaagatgttcatcatcttcatcttcttcctttg 42827635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 50536130 - 50536173
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttg 44  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  50536130 ttatagacatgattacattagagatcctttatcttatttatttg 50536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 53776577 - 53776644
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||  |||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  53776577 ttatagacaatattacattagaggtcctttatcttatttatttgtaacactttggtcctttatcttta 53776644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 13243269 - 13243219
Alignment:
Q  190 caaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  13243269 caaatccataaatatgatgaagatgttcatcatcttcgtcttcttcctttg 13243219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 240
Target Start/End: Original strand, 53776774 - 53776816
Alignment:
Q  198 gaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  53776774 gaaatatgatgaagatgttcatcatattcatcttcttcctttg 53776816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 2584497 - 2584546
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  2584497 aaatccagaaatatgataaagatggtcatcatcttcatcttcttcctttg 2584546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 15083660 - 15083619
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  15083660 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 15083619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 37219130 - 37219081
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  37219130 aaatccaaaaatatgatgaaggtgttcatcatcttcatcttcttcctttg 37219081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 37786490 - 37786531
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  37786490 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 37786531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 40907250 - 40907299
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  40907250 aaatccaaaaatatgatgaagatgttcaccatcttcatcttcttcctttg 40907299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 41102796 - 41102845
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  41102796 aaatccaaaaatatgatgaagatgtttatcatcttcatcttcttcctttg 41102845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 55412874 - 55412833
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  55412874 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 55412833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 51721773 - 51721729
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||    
T  51721773 aaattcagaaatatgatgaagatgttcatcatcttcatcttcttc 51721729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3890951 - 3891018
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| |||| || || |||||||||||||||||| ||| || |||||||||||||||    
T  3890951 ttatagacaggattacattataggtcttttatcttatttatttgtaacactttggtcctttatcttta 3891018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 18763642 - 18763599
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    ||||||||||||||||||||||| |||||||||||||| |||||    
T  18763642 tgaaacaaatccagaaatatgataaagatgttcatcatcttcat 18763599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 40907989 - 40907909
Alignment:
Q  33 cttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||||| ||||||||||||||||||        |||||  |||||||| ||||||||||||||||||||||||    
T  40907989 cttatttatttgttacacttgggtcctttatcttta-tttttttcgctt--gtcttttatctcttataaaagcacatatacatc 40907909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 42827098 - 42827145
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttc 232  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||||    
T  42827098 tgaaaaaaatccagaaatacgatgaagatgttcatcatcttcatcttc 42827145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 44841447 - 44841486
Alignment:
Q  77 cgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  44841447 cgcttaggtcttttatctcttataaaagcacatatacatc 44841486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 45052645 - 45052602
Alignment:
Q  193 atccagaaatatgatgaagatgttcatcattttcatcttcttcc 236  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  45052645 atccaaaaatatgatgaagatgttcatcatcttcatcttcttcc 45052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 55219765 - 55219699
Alignment:
Q  2 tatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| ||| ||||| ||||||||| ||||||||||||||||||| ||| || |||| ||||||||||    
T  55219765 tatatacacgattacattagagattctttatcttatttatttgtaacactttggtcttttatcttta 55219699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 4231206 - 4231243
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4231206 tgaaacaaattcagaaatatgatgaagatgttcatcat 4231243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 18763045 - 18763098
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctt 238  Q
    ||||| ||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  18763045 tgaaaaaaatccaaaaatatgatgaagattttcatcatcttcatcctcttcctt 18763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 30439244 - 30439195
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  30439244 aaatccacaaatatgatgaagatgttcatcatcttcgtcttcttcatttg 30439195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 55413033 - 55412944
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||||||||| |||||| |||||||||||||||         |||||  |||||||| |||| |||||||||||||||||||    
T  55413033 tttatcttatttatttgtaacattttggtcctttatctttattttttttccgcttcagtcttttatctctcataaaagcacatatacatc 55412944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 42826930 - 42826986
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| ||||| ||||||||||||||||||||||| ||| || |||| ||||||||||    
T  42826930 attacattagggatcctttatcttatttatttgtaacactttggtcttttatcttta 42826986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 53777473 - 53777369
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatat 111  Q
    |||| ||||| | ||| ||||||||||||||||| |||||| |||| ||||||||||        |||||||||| |||| ||||  ||||||||||| |    
T  53777473 attacattaggggtccattatcttatttatttgtaacattttggtcatttatctttattttttcccgcttaggtcctttatctctcttaaaagcacatgt 53777374  T
Q  112 acatc 116  Q
    |||||    
T  53777373 acatc 53777369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 29835530 - 29835479
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttat 63  Q
    |||| ||||||| ||||||||||||||||||||| ||| || ||||||||||    
T  29835530 attatattagaggtcctttatcttatttatttgtaacactttggtcctttat 29835479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 31312723 - 31312680
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||| ||| || |||||||||||||||    
T  31312723 tcctttatcttatttatttgtaacactttggtcctttatcttta 31312680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 40908372 - 40908337
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatctta 36  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40908372 ttatagacatgattacattagagatcctttatctta 40908337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 51721900 - 51721857
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||| ||| || |||||||||||||||    
T  51721900 tcctttatcttatttatttgtaacactttggtcctttatcttta 51721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 38697933 - 38697980
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||||||||    
T  38697933 aaatccataaatatgatgaa--tgttcatcatcttcatcttcttcctttg 38697980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10825943 - 10825992
Alignment:
Q  19 tagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||| |||||||||||| ||| || |||| ||||||||||    
T  10825943 tagagatcctttattttatttatttgtaacactttggtcatttatcttta 10825992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 27328849 - 27328816
Alignment:
Q  207 tgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||| |||||||||||||||||    
T  27328849 tgaagatgttcatcatcttcatcttcttcctttg 27328816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 33213749 - 33213802
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatct 65  Q
    |||| ||||||| || |||||||||||||||||| ||| || ||||||||||||    
T  33213749 attatattagaggtcttttatcttatttatttgtaacactttggtcctttatct 33213802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 37178598 - 37178635
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  37178598 aaatccagaattatgatgaagatgttcatcatcttcat 37178635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 44842133 - 44842096
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  44842133 tgaaaaaaatccaaaaatatgatgaagatgttcatcat 44842096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 50547577 - 50547532
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||||    
T  50547577 gatcctttatcttatttatttgtaacactttggtcctttgtcttta 50547532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 2584388 - 2584424
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  2584388 ttaggtcttttatctctcataaaagcacatatacatc 2584424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 30361893 - 30361929
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  30361893 ttaggtcttttatctctcataaaagcacatatacatc 30361929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30362708 - 30362652
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| ||||| | ||||||||||||||||||||| ||| || | |||||||||||||    
T  30362708 attacattaggggtcctttatcttatttatttgtaacactttgatcctttatcttta 30362652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 33213924 - 33213968
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    ||||||| ||||| |||||| ||||||||||| ||||||||||||    
T  33213924 aaatccaaaaataagatgaacatgttcatcatcttcatcttcttc 33213968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 33214970 - 33214930
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  33214970 aaataagatgaacatgttcatcatcttcatcttcttccttt 33214930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 38697811 - 38697851
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||| |||||| | |||||||||||||    
T  38697811 tttatcttatttatttgtaacattttgatcctttatcttta 38697851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 42827797 - 42827761
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  42827797 ttaggtcttttatctctcataaaagcacatatacatc 42827761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 55219585 - 55219541
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    ||||||| ||||||||||||||||| |||||| |||||| |||||    
T  55219585 aaatccaaaaatatgatgaagatgtccatcatcttcatcatcttc 55219541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 30580 - 30465
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  30580 ttatagagatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 30481  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30480 aaagcacatatacatc 30465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 23081 - 23130
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  23081 aaatccaaaaatatgatgaagatgttcatcatcttcatctttttcctttg 23130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 23667 - 23626
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  23667 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21817253 - 21817138
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  21817253 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 21817154  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  21817153 aaagcacatatacatc 21817138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38179839 - 38179954
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  38179839 ttatagacatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttattttttttcgcttaggtcttttatctcttata 38179938  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  38179939 aaagcacatatacatc 38179954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41338175 - 41338060
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||||| |||||||| ||||||||    
T  41338175 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaagtcttttatctcttata 41338076  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41338075 aaagcacatatacatc 41338060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44884655 - 44884541
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  44884655 ttatagacatgattacattatagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 44884556  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  44884555 aaagcacatatacat 44884541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 723665 - 723780
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  723665 ttatagacatgattgcattagagatcttttatcttatttatttgttacacttgggtcctttatctttattttttttcgcttaggtcttttatctcttata 723764  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  723765 aaagcacatatacatc 723780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33244774 - 33244889
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  33244774 ttatagacatgattacattgaagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 33244873  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  33244874 aaagcacatatacatc 33244889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41856449 - 41856564
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||        |||||| |||||||| ||||||||    
T  41856449 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcgtttatctttatttttttccgcttaagtcttttatctcttata 41856548  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41856549 aaagcacatatacatc 41856564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47907115 - 47907230
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||        ||||||||||||||| ||||||||    
T  47907115 ttatagacatgattacattagagatcttttatcttatttatttgttacacttggatcctttatctttatttttttccgcttaggtcttttatctcttata 47907214  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  47907215 aaagcacatatacatc 47907230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3412842 - 3412957
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| |||||| |    
T  3412842 ttatagacatgattacattaaagatcttttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttaca 3412941  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  3412942 aaagcacatatacatc 3412957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4657190 - 4657305
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  4657190 ttatagaaatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttattttttttcacttaggtcttttatctcttata 4657289  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  4657290 aaagcacatatacatc 4657305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16274086 - 16274201
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||| ||| ||||||||||||||        ||||||||||||||| ||||||||    
T  16274086 ttatagacatgattacattagagattctttattttatttatttgttacacttgagtcctttatctttatttttttccgcttaggtcttttatctcttata 16274185  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  16274186 aaagcacatatacatc 16274201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 46553612 - 46553727
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||        ||||||| ||||||| ||||||||    
T  46553612 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcatttatctttatttttttccgcttagatcttttatctcttata 46553711  T
Q  101 aaagcacatatacatc 116  Q
    |||||| |||||||||    
T  46553712 aaagcatatatacatc 46553727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 48950410 - 48950525
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||        |||||| |||||||| ||||||||    
T  48950410 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgagtcatttatctttatttttttccgcttaagtcttttaactcttata 48950509  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  48950510 aaagcacatatacatc 48950525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20122211 - 20122096
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||  ||| ||||||||||        ||||||||||||||| || |||||    
T  20122211 ttatagacatgattacattagagatcctttatcttatttatttgttacactttagtcttttatctttattttttttcgcttaggtcttttatcttttata 20122112  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  20122111 aaagcacatatacatc 20122096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40013802 - 40013917
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||| || | ||||||||||||||||||||| ||||||||||||||||||        |||| |||||||||| ||||||||    
T  40013802 ttatagacatgattacattagatattcattatcttatttatttgttacacttgggtcctttatctttatttttttccgctcaggtcttttatctcttata 40013901  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  40013902 aaagcacatatacatc 40013917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9659185 - 9659299
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||         || |||||||||||| |||||||    
T  9659185 ttatagacatgattacattagagatcctttatcttatttatttgtaacattttggtcctttatctttattttttttccgtttaggtcttttatctcttat 9659284  T
Q  100 aaaagcacatataca 114  Q
    |||||||||||||||    
T  9659285 aaaagcacatataca 9659299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44457074 - 44457188
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  44457074 ttatagacatgattacattaaagatcctttattttatttatttgttacacttgggtcctttatcttta-tttttttcacttaggtcttttatctcttata 44457172  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  44457173 aaagcacatatacatc 44457188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4861802 - 4861735
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4861802 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatcttta 4861735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17286500 - 17286567
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  17286500 ttatagacatgattacattagaggtcctttatcttatttatttgttacacttgggtcctttatcttta 17286567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 723848 - 723903
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  723848 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 723903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 21817070 - 21817015
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21817070 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 21817015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 41338000 - 41337945
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41338000 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41337945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 41856633 - 41856688
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41856633 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41856688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 44457258 - 44457313
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44457258 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 44457313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 47907299 - 47907354
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47907299 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 47907354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 48950585 - 48950640
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48950585 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 48950640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 3413024 - 3413079
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  3413024 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcttttg 3413079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4657374 - 4657429
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4657374 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcctcctttg 4657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 17286667 - 17286722
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  17286667 tgaaacaaatccagaaatatgatgaagatattcatcatcttcatcttcttcctttg 17286722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17961685 - 17961800
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| || | |||||||||||||        || |||||| ||||| |||| |||    
T  17961685 ttatagacaggattacattagaggtcctttatcttatttatttgtaacactttgatcctttatctttatttttttccgtttaggttttttatctctcata 17961784  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  17961785 aaagcacatatacatc 17961800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33244956 - 33245011
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  33244956 tgaaacaaatccagaaatacgatgaagatgttcatcatcttcatcttcttcctttg 33245011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44520307 - 44520422
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| |||||  |||||| || |||||||||||||||||| |||||| |||| ||||||||||        || |||||||||||| |||| |||    
T  44520307 ttatagacacgattacgttagaggtcatttatcttatttatttgtaacattttggtcttttatctttatttttttccgtttaggtcttttatctctcata 44520406  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  44520407 aaagcacatatacatc 44520422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 44884470 - 44884415
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  44884470 tgaaacaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 44884415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 40013984 - 40014038
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  40013984 tgaaacaaatccagaaatatgatgaagatgttcatcctcttcatcttcttccttt 40014038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 8391797 - 8391846
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8391797 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 8391846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 19233182 - 19233133
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19233182 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 19233133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 46001719 - 46001604
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| ||| || |||||| ||||||||         || ||||||| |||| |||||||    
T  46001719 ttatagccatgattacattagagatcctttatcttatttatttgtaacactttggtcctctatctttattattttttcgtttaggtc-tttatctcttat 46001621  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  46001620 aaaagcacatatacatc 46001604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 17967217 - 17967162
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  17967217 tgaaaaaaatacagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 17967162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23592717 - 23592832
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| ||||||| ||||||||||||| ||| || |||||||||||||||        || |||| ||||||| |||| |||    
T  23592717 ttatagacaggattacattagaggtcctttaacttatttatttgtaacactttggtcctttatctttatttttttccgtttagatcttttatctctcata 23592816  T
Q  101 aaagcacatatacatc 116  Q
    ||| ||||||||||||    
T  23592817 aaaacacatatacatc 23592832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 47504708 - 47504763
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  47504708 tgaaaaaaatccagaaatatgataaagatgttcatcatcttcatcttcttcctttg 47504763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 47907897 - 47907842
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  47907897 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 47907842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 48951171 - 48951116
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  48951171 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 48951116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 9659721 - 9659770
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9659721 aaatccagaaatatgatgaagatgttcatgatcttcatcttcttcctttg 9659770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 9662521 - 9662472
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9662521 aaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 9662472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 20121123 - 20121172
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20121123 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 20121172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 21737152 - 21737103
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  21737152 aaatccagaaataagatgaagatgttcatcatcttcatcttcttcctttg 21737103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 21816505 - 21816554
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21816505 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 21816554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 33245522 - 33245473
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  33245522 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 33245473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 40014571 - 40014522
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40014571 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 40014522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 41337407 - 41337456
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41337407 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41337456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 41857537 - 41857488
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  41857537 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 41857488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 46554377 - 46554328
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  46554377 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 46554328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 46934597 - 46934646
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  46934597 aaatctagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 46934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 48606515 - 48606466
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  48606515 aaatccagaaatatgatgaagatgttcatcatcttcatctttttcctttg 48606466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 46934416 - 46934520
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacata 110  Q
    ||||| |||||| ||| |||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| |||| |||||||||||||    
T  46934416 gattacattagaaatcatttatcttatttatttgtaacactttggtcctttatcttta-ttttttccgtttaggtcttttatctctcataaaagcacata 46934514  T
Q  111 tacatc 116  Q
    ||||||    
T  46934515 tacatc 46934520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 20122027 - 20121972
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| || |||||||||||||||||||||||| |||||||||||||||||    
T  20122027 tgaaataaattcataaatatgatgaagatgttcatcatcttcatcttcttcctttg 20121972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21737340 - 21737273
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||| |||| ||||||| || |||||||||||||||||| ||| || |||||||||||||||    
T  21737340 ttatagacattattacattagagctcatttatcttatttatttgtaacactttggtcctttatcttta 21737273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 46001540 - 46001485
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  46001540 tgaaaaaaattcagaaatatgatgaagatgtccatcatcttcatcttcttcctttg 46001485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 41289078 - 41289032
Alignment:
Q  194 tccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||    
T  41289078 tccataaatatgatgaagatgttcatcatattcatcttcttcctttg 41289032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47505570 - 47505453
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    |||||||||  |||| ||||||| ||||||||||||||||||||| ||| || ||||| |||||||||          || |||||||||||| |||| |    
T  47505570 ttatagacaaaattacattagaggtcctttatcttatttatttgtaacactttggtccgttatctttattttttttttcgattaggtcttttatctctca 47505471  T
Q  99 taaaagcacatatacatc 116  Q
    ||||||||||||||||||    
T  47505470 taaaagcacatatacatc 47505453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 3415038 - 3414989
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||||||    
T  3415038 aaatccaaaaatatgatgaagatgttcatcatcttcctcttcttcctttg 3414989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 28588493 - 28588444
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  28588493 aaatccaaaaatatgataaagatgttcatcatcttcatcttcttcctttg 28588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 38180024 - 38180061
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38180024 tgaaacaaatccagaaatatgatgaagatgttcatcat 38180061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 44458185 - 44458136
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  44458185 aaatccaaaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 44458136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 44883850 - 44883891
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  44883850 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 44883891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 46000949 - 46000998
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  46000949 aaatgcagaaatatgatgaagatgttcatcatcttcatcttcttcttttg 46000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 46935169 - 46935120
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||    
T  46935169 aaatccagaaatatgatgaaaatattcatcatcttcatcttcttcctttg 46935120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 35214510 - 35214462
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||    
T  35214510 aaatccagaaataagatgaatatgttcatcatcttcatcttcttccttt 35214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 48605945 - 48606000
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| |||||||||||||||||| |||||||| |||||||||||| ||||    
T  48605945 tgaaaaaaattcagaaatatgatgaagatattcatcatcttcatcttcttcatttg 48606000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 35214672 - 35214630
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttt 67  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  35214672 tcctttatcttatttatttgtaacattttggtcctttatcttt 35214630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 8392358 - 8392321
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8392358 tgaaaaaaatccagaaatatgatgaagatgttcatcat 8392321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 23593463 - 23593415
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  23593463 aaatctagaaatatg-tgaagatgttcatcatcttcatcttcttcctttg 23593415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 41288520 - 41288569
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  41288520 aaatccataaatatgatgaagatgttcattatcttcattttcttcctttg 41288569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 46553798 - 46553851
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    
T  46553798 aaacaaatccaaaaatatgttgataatgttcatcatcttcatcttcttcctttg 46553851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 48684334 - 48684375
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  48684334 aaatatgatgaagatgtttatcatcttcatcttcttcctttg 48684375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41287729 - 41287840
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| |  || ||| |||||||||||||| ||| |    |||||||||||||        || |||||||||||| ||||||||    
T  41287729 ttatagacatgattacattaaaagtcttttttcttatttatttgtaacacta---tcctttatctttatttttttccgtttaggtcttttatctcttata 41287825  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  41287826 aaagcacatatacat 41287840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48605864 - 48605908
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgt 45  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||    
T  48605864 ttatagacatgattacattagaggtcatttatcttatttatttgt 48605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 241453 - 241386
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| ||||||| || |||||||||||||||| | ||| || || ||||||||||||    
T  241453 ttatagacaagattacattagaggtcatttatcttatttatttttaacactttggccctttatcttta 241386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 13930796 - 13930851
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttt 67  Q
    |||||||||| | ||||||||||||||||||| | ||| || ||||||||||||||    
T  13930796 attaaattaggggtcctttatcttatttatttttaacactttggtcctttatcttt 13930851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19233675 - 19233632
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttg 44  Q
    ||||||||| ||||||||||||| || |||||||||||||||||    
T  19233675 ttatagacaagattaaattagaggtcatttatcttatttatttg 19233632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 46935354 - 46935291
Alignment:
Q  5 agacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| ||||| |||| |||||||||||||||||| | |||| |||| ||||||||||    
T  46935354 agacaagattacattagggatcatttatcttatttatttgtaaaattttggtcatttatcttta 46935291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 17961871 - 17961908
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  17961871 aaatccagaattatgatgaagatgttcatcatcttcat 17961908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 17967373 - 17967316
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||||| |||||||||||||||||| || ||| || | |||||||||||||    
T  17967373 gattacattagaggtcctttatcttatttattagtaacactttgatcctttatcttta 17967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 23592904 - 23592941
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  23592904 aaatccagaattatgatgaagatgttcatcatcttcat 23592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 47505381 - 47505344
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  47505381 aaatccagaattatgatgaagatgttcatcatcttcat 47505344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 8391694 - 8391730
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  8391694 ttaggtcttttatctctcataaaagcacatatacatc 8391730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 19233291 - 19233255
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  19233291 ttaggtcttttatctctcataaaagcacatatacatc 19233255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 48606667 - 48606627
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||| ||| || |||||||||||||||    
T  48606667 tttatcttatttatttgtaacactttggtcctttatcttta 48606627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12501304 - 12501189
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||| ||||||||    
T  12501304 ttatagacatgattacattagagatcttttatcttatttatttgttacatttgagtcctttatctttattttttcccgcttaggtcttttatctcttata 12501205  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  12501204 aaagcacatatacatc 12501189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39590608 - 39590493
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  39590608 ttatagacatgattacattagagatcctttattttatttatttgttacacttgggtcctttatctttattttttttcacttaggtcttttatctcttata 39590509  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  39590508 aaagcacatatacatc 39590493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42610083 - 42610198
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  42610083 ttatagacatgattacattagagatcctttattttatttatttgttacacttgggtcctttatctttattttttttcacttaggtcttttatctcttata 42610182  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  42610183 aaagcacatatacatc 42610198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9593725 - 9593609
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnnc-gcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||        | |||||||||||||| |||||||    
T  9593725 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgagtcctttatctttattttttttcggcttaggtcttttatctcttat 9593626  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  9593625 aaaagcacatatacatc 9593609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19666519 - 19666404
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||        ||||||||||||||| ||||||||    
T  19666519 ttatagacatgattacattagagatcatttatcttatttatttgttacacttgagtcatttatctttatttttttccgcttaggtcttttatctcttata 19666420  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  19666419 aaagcacatatacatc 19666404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27018300 - 27018415
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  27018300 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 27018399  T
Q  101 aaagcacatatacatc 116  Q
    ||||||| || |||||    
T  27018400 aaagcacttaaacatc 27018415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30128794 - 30128909
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        | |||||||| |||| ||||||||    
T  30128794 ttatagacatgattacattagagatcatttatcttatttatttgttacacttgggtcctttatctttattttttttcacttaggtcatttatctcttata 30128893  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30128894 aaagcacatatacatc 30128909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 744251 - 744366
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||        ||||||||||||||| || |||||    
T  744251 ttatagatatgattacattagagatccattatcttatttatttgttacacttgggtcttttatctttatttttttccgcttaggtcttttatctattata 744350  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  744351 aaagcacatatacatc 744366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 822996 - 823111
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||||||||         | |||||||||||| ||||||||    
T  822996 ttatagacatgattacattagagatcctttatcttatttatttgttacactttggtcttttatctttatttttttctgtttaggtcttttatctcttata 823095  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  823096 aaagcacatatacatc 823111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9985535 - 9985650
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| |||||| |||||||||||||||        || |||||||||||| |||| |||    
T  9985535 ttatagacatgattacattagaggtcttttatcttatttatttgtaacattttggtcctttatctttatttttttccgtttaggtcttttatctctcata 9985634  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  9985635 aaagcacatatacatc 9985650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 11986492 - 11986378
Alignment:
Q  2 tatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataa 101  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||||||| ||||||||||        || |||||||||||| |||||||||    
T  11986492 tatagacatgattacattaaagttcctttatcttatttatttgttgcatttgggtcatttatctttattttttttcgtttaggtcttttatctcttataa 11986393  T
Q  102 aagcacatatacatc 116  Q
    |||||||||| ||||    
T  11986392 aagcacatatgcatc 11986378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20544368 - 20544482
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||        |   ||||||||||| ||||||||    
T  20544368 ttataaacatgattacattagagatcttttatcttatttatttgttacatttaggtcctttatcttta-ttttttccatgtaggtcttttatctcttata 20544466  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  20544467 aaagcacatatacatc 20544482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 37938663 - 37938776
Alignment:
Q  2 tatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataa 101  Q
    |||||||||||||| |||| ||||| |||||||||||||||||||||| ||| || |||||||||||        ||||||||||||||| |||||||||    
T  37938663 tatagacatgattacattaaagatcttttatcttatttatttgttacacttgagt-ctttatctttatttttttccgcttaggtcttttatctcttataa 37938761  T
Q  102 aagcacatatacatc 116  Q
     ||||||||||||||    
T  37938762 gagcacatatacatc 37938776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 744434 - 744489
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  744434 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 744489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 19504769 - 19504714
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19504769 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 19504714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 37938843 - 37938898
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37938843 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 37938898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 39590420 - 39590365
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39590420 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 39590365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 42610268 - 42610323
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42610268 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 42610323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 30128980 - 30129033
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30128980 aaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 30129033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19504951 - 19504835
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtc-ttttacctcttat 99  Q
    ||||||||||||||| ||||||| ||||||| | ||||||||||||||| || || ||||||||||||        |||||||||| ||||| |||||||    
T  19504951 ttatagacatgattacattagaggtcctttaacatatttatttgttacactttggccctttatctttatttttttccgcttaggtctttttatctcttat 19504852  T
Q  100 aaaagcacatatacatc 116  Q
    |||| ||||||||||||    
T  19504851 aaaaacacatatacatc 19504835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37272615 - 37272497
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta---nnnnnnnncgcttaggtcttttacctctt 97  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||| || |||||||||||||||           || |||||||||||| |||||    
T  37272615 ttatagacatgattacattagaggtcatttatcttatttatttgtaacactttggtcctttatctttattttttttttccgtttaggtcttttatctctt 37272516  T
Q  98 ataaaagcacatatacatc 116  Q
    |||||||||||||||||||    
T  37272515 ataaaagcacatatacatc 37272497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 823179 - 823234
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  823179 tgaaacaaatccagaaatatgatgaagatattcatcatcttcatcttcttcctttg 823234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9593540 - 9593485
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  9593540 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttgctttg 9593485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9986290 - 9986235
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9986290 tgaaaaaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 9986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 11986308 - 11986253
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11986308 tgaaacaaatctagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 11986253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 19666333 - 19666278
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  19666333 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcttttg 19666278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 20544549 - 20544604
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20544549 tgaaacaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 20544604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31547640 - 31547755
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||| || |||| ||||||||||         | |||||||||||| |||| |||    
T  31547640 ttatagacatgattacattagaggtcctttatcttatttatttgtaacactttggtcttttatctttatttttttctgtttaggtcttttatctctcata 31547739  T
Q  101 aaagcacatatacatc 116  Q
     |||||||||||||||    
T  31547740 gaagcacatatacatc 31547755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11078331 - 11078217
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| || |||||||||||||||| | |||||| |||||||||||||||        || |||||| ||||| |||| |||    
T  11078331 ttatagacaagattacattagaggtcttttatcttatttatttataacattttggtcctttatctttatttttttccgtttaggttttttatctctcata 11078232  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  11078231 aaagcacatatacat 11078217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 13304417 - 13304368
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13304417 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 13304368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 34401901 - 34401852
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34401901 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 34401852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 37272416 - 37272367
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37272416 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 37272367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 12501121 - 12501066
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  12501121 tgaaacaaatccaaaaatatgatgaagatgttcatcatcttcatcttctttctttg 12501066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 27018483 - 27018538
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  27018483 tgaaacaaatcaagaaatacgatgaagatgttcatcatcttcatcttcttcctttg 27018538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31551098 - 31551043
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  31551098 tgaaaaaaatccagaaatatgatgaagatattcatcatcttcatcttcttcctttg 31551043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 823760 - 823711
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  823760 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 823711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 9592897 - 9592946
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9592897 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 9592946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 11985751 - 11985792
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11985751 aaatatgatgaagatgttcatcattttcatcttcttcctttg 11985792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 27551858 - 27551907
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttctt 234  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  27551858 tgaaaaaaatccagaaatatgatgaagatgttcatcatcttcatcttctt 27551907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7179838 - 7179953
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| || |||| ||||||| || |||||||||||||||||| ||| || |||  ||||||||||        || |||||||||||| |||| |||    
T  7179838 ttatagatataattacattagaggtcttttatcttatttatttgtaacactttggttatttatctttatttttttccgtttaggtcttttatctctcata 7179937  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  7179938 aaagcacatatacatc 7179953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 37939430 - 37939375
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  37939430 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatctttttcctttg 37939375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 7180604 - 7180555
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  7180604 aaattcagaaatatgatgaagatgttcatcatcttcatattcttcctttg 7180555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 12500505 - 12500546
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  12500505 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 12500546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 19504129 - 19504178
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  19504129 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcttttg 19504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 19665997 - 19666046
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  19665997 aaatccaaaaatatgatgaagatgttcatcatcatcatcttcttcctttg 19666046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 20545127 - 20545078
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  20545127 aaatccaaaaatatgatgaagatattcatcatcttcatcttcttcctttg 20545078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 27019047 - 27018998
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  27019047 aaatccaaaaatatgatgaagatcttcatcatcttcatcttcttcctttg 27018998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 37271827 - 37271876
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||    
T  37271827 aaatccagaaatatcatgtagatgttcatcatcttcatcttcttcctttg 37271876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 39589528 - 39589577
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  39589528 aaatccaaaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 39589577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 42611181 - 42611132
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  42611181 aaatccaaaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 42611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 1833657 - 1833609
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  1833657 aaatccagaaataagatgaacatgttcatcatttttatcttcttccttt 1833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 40319123 - 40319075
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  40319123 aaatccagaaataagatgaacatgttcatcatttttatcttcttccttt 40319075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 34402055 - 34401976
Alignment:
Q  37 tttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||||||||||||||||||    
T  34402055 tttatttgtaacactttggtcctttatctttatttttttccgtttaggtcttttatctcttataaaagcacatatacatc 34401976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 11985581 - 11985669
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||||||||| ||| || |||||||||||||||        || ||||||| |||| ||||  ||||||||||||||||||    
T  11985581 tttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttaggtcatttatctctcttaaaagcacatatacatc 11985669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 37271705 - 37271747
Alignment:
Q  26 cctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||||| ||| || |||||||||||||||    
T  37271705 cctttatcttatttatttgtaacactttggtcctttatcttta 37271747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 9531531 - 9531580
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||| |||||| ||||||||||  |||||||||||| ||||    
T  9531531 aaatccagaaataagatgaacatgttcatcaccttcatcttcttcttttg 9531580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 13304543 - 13304498
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||| |||||||||||||||||| ||| || |||||||||||||||    
T  13304543 gatcatttatcttatttatttgtaacactttggtcctttatcttta 13304498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 27551699 - 27551756
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| | ||||||||||||||||||||| ||| || | |||||||||||||    
T  27551699 gattacattaggggtcctttatcttatttatttgtaacactttgatcctttatcttta 27551756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 31547834 - 31547871
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  31547834 aaatccagaattatgatgaagatgttcatcatcttcat 31547871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 9532644 - 9532604
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||| |||| |||||| |||||||||||||||    
T  9532644 tttatcttatttaattgtaacattttggtcctttatcttta 9532604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 30129872 - 30129825
Alignment:
Q  192 aatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||| ||||||||| |||||||||||||| |||| ||||||||||||    
T  30129872 aatccaaaaatatgataaagatgttcatcatcttca-cttcttcctttg 30129825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 20352204 - 20352319
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  20352204 ttatagacataattacattagagatcctttattttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 20352303  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  20352304 aaagcacatatacatc 20352319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54921272 - 54921157
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        | ||||||||||||| ||||||||    
T  54921272 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccacttaggtcttttatctcttata 54921173  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  54921172 aaagcacatatacatc 54921157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3034034 - 3034149
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        |||||||||| |||| ||||||||    
T  3034034 ttatagacatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcctttatctcttata 3034133  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  3034134 aaagcacatatacatc 3034149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16666557 - 16666442
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||        |||||| |||||||| ||||||||    
T  16666557 ttatagacatgactaaattagaggtcctttatcttatttatttgttacacttgggtcctttatctttagttttttccgcttatgtcttttatctcttata 16666458  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  16666457 aaagcacatatacatc 16666442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41039750 - 41039865
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||        | ||||||||||||| ||||||||    
T  41039750 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccacttaggtcttttatctcttata 41039849  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  41039850 aaagcacatatacatc 41039865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8941125 - 8941011
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtctttta-cctcttat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        |||| |||||||||| ||||||||    
T  8941125 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgctcaggtcttttatcctcttat 8941026  T
Q  100 aaaagcacatataca 114  Q
    |||||||||||||||    
T  8941025 aaaagcacatataca 8941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7489165 - 7489048
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||          ||||||||||||||| ||||||    
T  7489165 ttatagacatgattgaattagagatcatttatcttatttatttgttacacttgggtcctttatctttatttttttttccgcttaggtcttttatctctta 7489066  T
Q  99 taaaagcacatatacatc 116  Q
    ||||||||||||||||||    
T  7489065 taaaagcacatatacatc 7489048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9367061 - 9367177
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||         |||| |||||||||| |||||||    
T  9367061 ttatagacataattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttattttttttccgctgaggtcttttatctcttat 9367160  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  9367161 aaaagcacatatacatc 9367177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17362932 - 17362832
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        ||||||||||||||| ||||||||    
T  17362932 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 17362833  T
Q  101 a 101  Q
    |    
T  17362832 a 17362832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 52449230 - 52449115
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||||        ||||||||||||||  ||||||||    
T  52449230 ttatatacatgattacattggagatcatttatcttatttatttgttacatttgggttctttatctttatttttatccgcttaggtcttttttctcttata 52449131  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  52449130 aaagcacatatacatc 52449115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 55449620 - 55449735
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||| | |||||||||||        ||||||||||||||| ||||||||    
T  55449620 ttatagacatgattacattagaggtccattatcttatttatttgttacacttggattctttatctttatttttttccgcttaggtcttttatctcttata 55449719  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  55449720 aaagcacatatacatc 55449735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13530209 - 13530323
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||         || |||||||||||| |||||||    
T  13530209 ttatagacatgattacattagagatcctttatcttatttatttgtaacattttggtcctttatctttattttttttccgtttaggtcttttatctcttat 13530308  T
Q  100 aaaagcacatataca 114  Q
    |||||||||||||||    
T  13530309 aaaagcacatataca 13530323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20785307 - 20785421
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||| ||||||||||        ||||||| ||||||| ||||||||    
T  20785307 ttatagacatgattatattagagatcatttgtcttatttatttgttacacttgggtcatttatctttatttttttccgcttagatcttttatctcttata 20785406  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  20785407 aaagcacatatacat 20785421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30823864 - 30823981
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||          || |||||||||||| ||||||    
T  30823864 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttttccgtttaggtcttttatctctta 30823963  T
Q  99 taaaagcacatatacatc 116  Q
    ||||||||||||||||||    
T  30823964 taaaagcacatatacatc 30823981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4654848 - 4654732
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||| |||||||    
T  4654848 ttatagacatgattacattagagatcttttatcttatttatttgttacatttgggttctttatctttattttttttccgcttaggtcttttatctcttat 4654749  T
Q  100 aaaagcacatatacatc 116  Q
    ||||  |||||||||||    
T  4654748 aaaacaacatatacatc 4654732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 46719583 - 46719467
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||         | ||||||||||||| |||||||    
T  46719583 ttatagacatgattacattagaggtcctttatcttatttatttgttacacttggatcctttatctttattttttttccacttaggtcttttatctcttat 46719484  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  46719483 aaaagcacatatacatc 46719467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 49875614 - 49875499
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||| ||||||||||| |||| |||||||||||||        ||||||||||||||| ||||||||    
T  49875614 ttatagacatgattacattagaggtcttttatcttatatatttgttacacttggatcctttatctttatttttttccgcttaggtcttttatctcttata 49875515  T
Q  101 aaagcacatatacatc 116  Q
    |||| |||||||||||    
T  49875514 aaagaacatatacatc 49875499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 16666373 - 16666318
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16666373 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 16666318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 23417380 - 23417447
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  23417380 ttatagacatgattacattagagatcttttatcttatttatttattacatttgggtcctttatcttta 23417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 54921089 - 54921034
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54921089 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 54921034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 4654665 - 4654610
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4654665 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 4654610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 9367245 - 9367300
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9367245 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 9367300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 23417681 - 23417736
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23417681 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 23417736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23931764 - 23931879
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||| || |||||||||||||||        |  |||| | ||||| ||||||||    
T  23931764 ttatagacatgattacattagagatcatttatcttatttatttgtaacactttggtcctttatctttatttttttccatttagatattttatctcttata 23931863  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  23931864 aaagcacatatacatc 23931879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 52449046 - 52448992
Alignment:
Q  186 gaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52449046 gaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 52448992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 3034217 - 3034272
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  3034217 tgaaacaaatccagaaatatgatgaagatgttcatcatctttatcttcttcctttg 3034272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 8940940 - 8940889
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcc 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8940940 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcc 8940889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 20785492 - 20785547
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  20785492 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttctttctttg 20785547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 30824049 - 30824104
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  30824049 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcttttg 30824104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 34074098 - 34074153
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34074098 tgaaaaaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 34074153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 41039934 - 41039989
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  41039934 tgaaacaaatccagaaatatgatgaacatgttcatcatcttcatcttcttcctttg 41039989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42180112 - 42179997
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||| || ||||||||||||||||||||| ||| || |||| ||||||||||        || |||||||||||| |||| |||    
T  42180112 ttatagacatgattacattataggtcctttatcttatttatttgtaacactttggtcgtttatctttatttttttccgtttaggtcttttatctctcata 42180013  T
Q  101 aaagcacatatacatc 116  Q
     |||||||||||||||    
T  42180012 gaagcacatatacatc 42179997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 55449805 - 55449860
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  55449805 tgaaacaaatccagaaatacgatgaagatgttcatcatcttcatcttcttcctttg 55449860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28172322 - 28172439
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||| |  |||||||||||||||          || |||||||||||| ||||||    
T  28172322 ttatagacatgattacattagaggtcttttatcttatttatttgtaacactatggtcctttatctttatttatttttccgtttaggtcttttatctctta 28172421  T
Q  99 taaaagcacatatacatc 116  Q
    ||||||||||||||||||    
T  28172422 taaaagcacatatacatc 28172439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 35825610 - 35825659
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35825610 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 35825659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 35826161 - 35826112
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35826161 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 35826112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17519065 - 17519181
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    |||||||||| |||| |||||||||  |||||||||||||||||| ||| || |||||||||||||||          | |||||||||||| |||||||    
T  17519065 ttatagacataattacattagagattttttatcttatttatttgtaacactttggtcctttatctttatattttttttgtttaggtcttttatctcttat 17519164  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  17519165 aaaagcacatatacatc 17519181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 27956708 - 27956816
Alignment:
Q  7 acatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagca 106  Q
    ||||||||| ||||||| | ||||||||||||||||||||||| || | |||||||||| ||        || ||||||||||||  |||||||||||||    
T  27956708 acatgattacattagaggttctttatcttatttatttgttacactttgatcctttatctctatttttttccgtttaggtcttttatttcttataaaagca 27956807  T
Q  107 catatacat 115  Q
    |||||||||    
T  27956808 catatacat 27956816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 17519758 - 17519711
Alignment:
Q  193 atccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17519758 atccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 17519711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 28172478 - 28172533
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  28172478 tgaaaaaaatccagaaatatgatgaagatgtccatcatcttcatcttcttcctttg 28172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 31289743 - 31289798
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  31289743 tgaaaaaaatcaagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 31289798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31289610 - 31289672
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttat 63  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||| || ||||||||||    
T  31289610 ttatagacatgattacattagaggtcatttatcttatttatttgttacactttggtcctttat 31289672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 49875430 - 49875376
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  49875430 tgaaacaaatgtagaaatatgatgaagatgttcatcatcttcatcttcttccttt 49875376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 7488370 - 7488419
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  7488370 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 7488419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 9367835 - 9367786
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9367835 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 9367786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 13530745 - 13530794
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  13530745 aaatccagaaatatgatgaagatgttcatgatcttcatcttcttcctttg 13530794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 13533545 - 13533496
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  13533545 aaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 13533496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 17362213 - 17362262
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  17362213 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 17362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 20342284 - 20342235
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20342284 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 20342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 20353009 - 20352960
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20353009 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 20352960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 27956892 - 27956941
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  27956892 aaatccagaaatatgatgaagatgttcatcatcttcattttcttcctttg 27956941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 27958426 - 27958377
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  27958426 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 27958377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 28173052 - 28173003
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  28173052 aaatgcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 28173003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 52448493 - 52448542
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  52448493 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 52448542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 54920503 - 54920552
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  54920503 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 54920552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 23932522 - 23932478
Alignment:
Q  196 cagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  23932522 cagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 23932478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34074861 - 34074747
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||| ||| || |||||||||||||||        || ||| |||||||| |||| |||    
T  34074861 ttatagacatgattacattagaggtt-tttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttatgtcttttatctctcata 34074763  T
Q  101 aaagcacatatacatc 116  Q
     |||||||||||||||    
T  34074762 gaagcacatatacatc 34074747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 43304744 - 43304629
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||| | | ||||||||||||||||||| ||| || |||||||||||||||         | |||||||||||| |||| ||     
T  43304744 ttatagacaggattatattagcggttctttatcttatttatttgtaacactttggtcctttatctttatttttttcagtttaggtcttttatctctcatc 43304645  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  43304644 aaagcacatatacatc 43304629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 4654077 - 4654126
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  4654077 aaatccaaaaatacgatgaagatgttcatcatcttcatcttcttcctttg 4654126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 20352382 - 20352423
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20352382 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 20352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 20786087 - 20786038
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  20786087 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcatttg 20786038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 23931949 - 23931998
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  23931949 aaatccagaaatataatgaagatgtccatcatcttcatcttcttcctttg 23931998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 30824621 - 30824572
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  30824621 aaatccaacaatatgatgaagatgttcatcatcttcatcttcttcctttg 30824572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 49874854 - 49874895
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  49874854 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 49874895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35046115 - 35046048
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| |||| || || ||| |||||||||||||| ||| || |||||||||||||||    
T  35046115 ttatagacatgattacattataggtcttttttcttatttatttgtaacactttggtcctttatcttta 35046048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 16665765 - 16665814
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||| |  ||||||||||||||||    
T  16665765 aaatccaaaaatatgatgaagatgttcatcttcctcatcttcttcctttg 16665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 31291796 - 31291703
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||| ||||||||| ||| || |||||||||||||||        || ||||||| |||| ||||  ||||||||||||||||||    
T  31291796 gatcctttatcttttttatttgtaacacttcggtcctttatctttattttttcccgtttaggtcatttatctctcttaaaagcacatatacatc 31291703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 41040498 - 41040450
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  41040498 aaatccaaaaatatgatgaagatgttcatcatcttcatctt-ttcctttg 41040450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 46718829 - 46718870
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  46718829 aaatatgatgaagatgttcatcatcttaatcttcttcctttg 46718870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 46719397 - 46719344
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||| |||||||||||||||||||  | |||| |||||||||||||||||    
T  46719397 aaacaaattcagaaatatgatgaagatgcccctcatcttcatcttcttcctttg 46719344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17519907 - 17519863
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgt 45  Q
    |||||||||| |||| ||||||| |||||||||||||||||||||    
T  17519907 ttatagacattattacattagaggtcctttatcttatttatttgt 17519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13861819 - 13861752
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| |||| || |||||||| |||||||||||| ||| || |||| ||||||||||    
T  13861819 ttatagacaagattacattataggtcctttattttatttatttgtaacactttggtcttttatcttta 13861752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 17519250 - 17519279
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatc 220  Q
    ||||||||||||||||||||||||||||||    
T  17519250 aaatccagaaatatgatgaagatgttcatc 17519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 27317828 - 27317779
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||| |||||| |||| |||||| |||||||||||||||||    
T  27317828 aaatccaaaaataagatgaacatgtccatcatcttcatcttcttcctttg 27317779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 31291629 - 31291580
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| ||||||||||| | ||||||| || |||||||||||||||||    
T  31291629 aaatccaaaaatatgatgatgttgttcattatcttcatcttcttcctttg 31291580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 43304553 - 43304516
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  43304553 aaatccagaattatgatgaagatgttcatcatcttcat 43304516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 23932652 - 23932612
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||||||| || |||| ||||||||||    
T  23932652 tttatcttatttatttgttacactttggtcatttatcttta 23932612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 55450496 - 55450456
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||| ||| || |||||||||||||||    
T  55450496 tttatcttatttatttgtaacactttggtcctttatcttta 55450456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16922140 - 16922025
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||         ||||||||||||||| ||||||||    
T  16922140 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcttttatctttctttttttccgcttaggtcttttatctcttata 16922041  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  16922040 aaagcacatatacatc 16922025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27784317 - 27784206
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        || |||||||||||| ||||||||    
T  27784317 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgtttaggtcttttatctcttata 27784218  T
Q  101 aaagcacatata 112  Q
    ||||||||||||    
T  27784217 aaagcacatata 27784206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4588041 - 4588154
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        | || |||||||||| ||||||||    
T  4588041 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttattttcactcaggtcttttatctcttata 4588140  T
Q  101 aaagcacatataca 114  Q
    ||||||||||||||    
T  4588141 aaagcacatataca 4588154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 953830 - 953944
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| || |||||||||||||||        ||||||||||||||| ||||||||    
T  953830 ttatagacatgattacattagaggtcctttatcttatttatttgttacacttaggtcctttatcttta-ttttttccgcttaggtcttttatctcttata 953928  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  953929 aaagcacatatacatc 953944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5686514 - 5686629
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |||         ||||||||||||||| ||||||||    
T  5686514 ttatagacatgattatattagaggtcttttatcttatttatttgttacatttgggtcctttatatttttttttttccgcttaggtcttttatctcttata 5686613  T
Q  101 aaagcacatatacatc 116  Q
    |||||||||| |||||    
T  5686614 aaagcacatacacatc 5686629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 17557752 - 17557867
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||        || |||| ||||||| ||||||||    
T  17557752 ttatagatatgattacattagagatcctttatcttatttatttgttacacttgggtcctttatctttatttttttccgtttagatcttttatctcttata 17557851  T
Q  101 aaagcacatatacatc 116  Q
    ||||| ||||||||||    
T  17557852 aaagcccatatacatc 17557867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23582105 - 23581989
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnnc-gcttaggtcttttacctcttat 99  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||        | | |||||||| ||| |||||||    
T  23582105 ttatagacatgattacattagagatcatttatcttatttatttgttacactttggtcctttatctttattttttttctgtttaggtctattatctcttat 23582006  T
Q  100 aaaagcacatatacatc 116  Q
    |||||||||||||||||    
T  23582005 aaaagcacatatacatc 23581989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 11152949 - 11153004
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11152949 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 11153004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14105830 - 14105715
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtc-ttttacctcttat 99  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||| ||| ||||||||||||||        |||||||||| ||||| |||||||    
T  14105830 ttatagacatgattacattagagatcatttatctcatttatttgttacacttgagtcctttatcttta-ttttttccgcttaggtctttttatctcttat 14105732  T
Q  100 aaaagcacatatacatc 116  Q
    ||||||| |||||||||    
T  14105731 aaaagcatatatacatc 14105715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 16921955 - 16921900
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16921955 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16921900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 17557936 - 17557991
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17557936 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 17557991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 4588225 - 4588276
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcc 236  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4588225 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcc 4588276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 5686701 - 5686752
Alignment:
Q  189 acaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5686701 acaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 5686752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 14105647 - 14105592
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  14105647 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatgttcttcctttg 14105592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 27784133 - 27784078
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  27784133 tgaaacaaatccagaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 27784078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 24084274 - 24084219
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24084274 tgaaaaaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 24084219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24084459 - 24084392
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  24084459 ttatagacaagattacattagaggtcctttatcttatttatttgtaacactttggtcctttatcttta 24084392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 25120357 - 25120302
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  25120357 tgaaaaaaatccagaaatatgatgaagatgttcgtcatcttcatcttcttcctttg 25120302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 5687239 - 5687190
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  5687239 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 5687190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 11153586 - 11153537
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11153586 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 11153537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 16919255 - 16919304
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16919255 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 16919304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 15288041 - 15287993
Alignment:
Q  192 aatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||    
T  15288041 aatcaagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15287993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 23581921 - 23581866
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||    
T  23581921 tgaaacaaatccagaaatatgatgaagtggttcatcatcttcgtcttcttcctttg 23581866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 27440990 - 27441041
Alignment:
Q  186 gaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcct 237  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27440990 gaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcct 27441041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28580340 - 28580273
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||  |||| |||||||||||||||| ||| || |||||||||||||||    
T  28580340 ttatagacatgattacattagatgtcctctatcttatttatttgtaacactttggtcctttatcttta 28580273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 14105073 - 14105122
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  14105073 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcttttg 14105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 25119749 - 25119798
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  25119749 aaatccaaaaatatgatgaacatgttcatcatcttcatcttcttcctttg 25119798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 23573990 - 23574081
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||||||||| |||||| |||||||| ||||||        || ||||||| |||| ||||  ||||||||||||||||||    
T  23573990 tcctttatcttatttatttgtaacattttggtcctttgtctttattttttcccgtttaggtcctttatctctcttaaaagcacatatacatc 23574081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 25120533 - 25120422
Alignment:
Q  5 agacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaag 104  Q
    |||||||| || ||||||  | |||| |||||||||||||| ||| || | |||||||||||||        || |||||||||||| ||||||||||||    
T  25120533 agacatgactacattagaagttctttttcttatttatttgtaacactttgttcctttatctttattttttttcgtttaggtcttttatctcttataaaag 25120434  T
Q  105 cacatatacatc 116  Q
    || |||||||||    
T  25120433 caaatatacatc 25120422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 4588823 - 4588774
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| || ||||||||||||||||||||| ||||| |||||||||||    
T  4588823 aaatccaaaactatgatgaagatgttcatcatcttcatgttcttcctttg 4588774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 11152843 - 11152880
Alignment:
Q  79 cttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11152843 cttaggtcttttatctcttataaaagcacatatacatc 11152880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 944670 - 944622
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| |||||| ||| |||| |||||||||||||||||||    
T  944670 aaatccagaaataagatgaacatgatcattattttcatcttcttccttt 944622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 11153781 - 11153738
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||| ||| || |||||||||||||||    
T  11153781 tcctttatcttatttatttgtaacactttggtcctttatcttta 11153738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 954013 - 954064
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||| |    || |||||||||||||||||    
T  954013 tgaaacaaatccagaaatatgatgaagatgat----atcttcatcttcttcctttg 954064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 11836555 - 11836521
Alignment:
Q  206 atgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||| |||||||||||||||||    
T  11836555 atgaagatgttcatcatcttcatcttcttcctttg 11836521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 15287823 - 15287864
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttc 232  Q
    ||||||||||||||||||||||| |||||| | |||||||||    
T  15287823 aaatccagaaatatgatgaagatattcatcgtcttcatcttc 15287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 954723 - 954683
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||| ||| || |||||||||||||||    
T  954723 tttatcttatttatttgtaacactttggtcctttatcttta 954683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 27441541 - 27441505
Alignment:
Q  192 aatccagaaatatgatgaagatgttcatcattttcat 228  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  27441541 aatccagaaatatgacgaagatgttcatcatcttcat 27441505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3905085 - 3905200
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||    
T  3905085 ttatagacatgattacattgaagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttata 3905184  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  3905185 aaagcacatatacatc 3905200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14004191 - 14004306
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||| ||||||||    
T  14004191 ttatagacatgattacattggagatcatttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtattttatctcttata 14004290  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  14004291 aaagcacatatacatc 14004306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4736891 - 4737004
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| ||||||||    
T  4736891 ttatagacatgattacattagagatcctttatcttatttatttgttacatttgggtcatttatcttta--tttttccgcttaggtcttttatctcttata 4736988  T
Q  101 aaagcacatatacatc 116  Q
    |||| |||||||||||    
T  4736989 aaagaacatatacatc 4737004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25761329 - 25761444
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||||||| || |||||||||||||||        ||||||||||||||| ||||||||    
T  25761329 ttatagacatggttacattagaggtcctttatcttatttatttgttacactttggtcctttatctttatttttttccgcttaggtcttttatctcttata 25761428  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  25761429 aaagcacatatacatc 25761444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38280437 - 38280552
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| ||||||||||        ||||| ||||||||| ||||||||    
T  38280437 ttatagacatgattacattagagatcatttatcttatttatttgttacacttgggtcatttatctttatttttttccgctttggtcttttatctcttata 38280536  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  38280537 aaagcacatatacatc 38280552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15154404 - 15154289
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||        || |||||||||||| ||||||||    
T  15154404 ttatagacttgattacattagaggtcctttatcttatttatttgttacacttggatcctttatctttattttttttcgtttaggtcttttatctcttata 15154305  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  15154304 aaagcacatatacatc 15154289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2290567 - 2290682
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||    
T  2290567 ttatagacatgattacattagagatcttttatctaatttatttgtaacactttggtcctttatctttattttttttcgtttaggtcttttatctcttata 2290666  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  2290667 aaagcacatatacatc 2290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25225280 - 25225166
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| ||||||||||        ||||||| ||||||| ||||||||    
T  25225280 ttatagacatgattacattagagatcttttatcttatttattttttacacttgggtcttttatcttta-tttttttcgcttagatcttttatctcttata 25225182  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  25225181 aaagcacatatacatc 25225166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 75750 - 75866
Alignment:
Q  1 ttatagacatgattaaat--tagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctctta 98  Q
    ||||||||||||||| ||  |||||||| |||||||||||||||||||||| ||||||| ||||||||||         |||||||||||||| ||||||    
T  75750 ttatagacatgattacatattagagatcatttatcttatttatttgttacacttgggtcttttatctttattattttttgcttaggtcttttatctctta 75849  T
Q  99 taaaagcacatatacat 115  Q
    |||||||||||||||||    
T  75850 taaaagcacatatacat 75866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39067217 - 39067329
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||| || | ||||||||||||||||||||||||||||| |||||| |||||||||||||||         | |||||||||||| ||||||||    
T  39067217 ttatagacattataacattagagatcctttatcttatttatttgtaacattttggtcctttatctttatttttttt-gtttaggtcttttatctcttata 39067315  T
Q  101 aaagcacatataca 114  Q
    ||||||||||||||    
T  39067316 aaagcacatataca 39067329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 75937 - 75992
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  75937 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 75992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 3905268 - 3905323
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3905268 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 3905323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 14004374 - 14004429
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14004374 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 14004429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 15154220 - 15154165
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15154220 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15154165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 25761514 - 25761569
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25761514 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 25761569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 45136203 - 45136258
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45136203 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 45136258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 4737074 - 4737128
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4737074 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttccttt 4737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 42079216 - 42079271
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42079216 tgaaaaaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 42079271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 1053313 - 1053427
Alignment:
Q  3 atagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttataa 101  Q
    |||| |||||||| ||| ||| ||||||||||||||| ||||||||||||| ||||||||||||||         || ||| |||||||| |||||||||    
T  1053313 atagtcatgattacatttgaggtcctttatcttatttctttgttacatttgagtcctttatctttattttttttccgtttatgtcttttatctcttataa 1053412  T
Q  102 aagcacatatacatc 116  Q
    |||||||||||||||    
T  1053413 aagcacatatacatc 1053427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 1053494 - 1053547
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctt 238  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  1053494 tgaaacaaatccagaaatatgataaagatgttcatcatcttcatcttcttcctt 1053547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 6646769 - 6646720
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6646769 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 6646720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 15400631 - 15400582
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15400631 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15400582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 39773566 - 39773615
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39773566 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 39773615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 3905845 - 3905790
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  3905845 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 3905790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6647142 - 6647027
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| || ||| |||||||||||        |  |||||||||||| |||| |||    
T  6647142 ttatagacaagattacattagaggtcctttatcttatttatttgtaacactttggttctttatctttattgttttccatttaggtcttttatctctcata 6647043  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||| ||||||    
T  6647042 aaagcacatgtacatc 6647027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 27550565 - 27550510
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27550565 tgaaaaaaattcagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 27550510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 38280621 - 38280676
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||    
T  38280621 tgaaacaaatccagaaatatgacgaagatgttcatcatcttcatctttttcctttg 38280676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 38281202 - 38281147
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38281202 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 38281147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 76563 - 76514
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  76563 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 76514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 1054070 - 1054021
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1054070 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 1054021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 3753320 - 3753369
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  3753320 aaatctagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 3753369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 15153677 - 15153726
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15153677 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 15153726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 25225092 - 25225043
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  25225092 aaatccagaaatatgatgaagatgttcatcatcttcatcttctttctttg 25225043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 7575330 - 7575286
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  7575330 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttc 7575286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 2290752 - 2290801
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  2290752 aaatccataaatatgatgtagatgttcatcatcttcatcttcttcctttg 2290801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 6646183 - 6646232
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  6646183 aaatctagaaatatgacgaagatgttcatcatcttcatcttcttcctttg 6646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Complemental strand, 39067973 - 39067924
Alignment:
Q  186 gaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  39067973 gaaaaaaatgcagaaatatgatgaagatgttcatcatcttcatcttcttc 39067924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 39068111 - 39068006
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacata 110  Q
    ||||| |||| || || |||||||||||||||||||||| || |||||||||||||||        || ||||||| |||| ||||  ||||||||||||    
T  39068111 gattacattataggtcatttatcttatttatttgttacactttggtcctttatctttattttttcccgtttaggtcatttatctctcttaaaagcacata 39068012  T
Q  111 tacatc 116  Q
    ||||||    
T  39068011 tacatc 39068006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 39965505 - 39965558
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||    
T  39965505 aaacaaatccataaatacgatgaagatgttcatcatcttcatcttctttctttg 39965558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28390129 - 28390196
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||| || ||| |||||| ||||||| ||| || |||||||||||||||    
T  28390129 ttatagacatgattacattagaggtcatttttcttatatatttgtaacaatttggtcctttatcttta 28390196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 39965405 - 39965444
Alignment:
Q  77 cgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  39965405 cgcttaggtcttttatctcttataaaagcacatatacatc 39965444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 3753179 - 3753292
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||||| ||| ||  ||| ||||||||||        || |||| ||||||| |||| |||    
T  3753179 ttatagacaagattacattagaggtcctttatcttatttatttgtaacactt-tgtcttttatcttta-ttttttccgtttagatcttttatctctcata 3753276  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  3753277 aaagcacatatacatc 3753292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39965357 - 39965399
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttattt 43  Q
    ||||||||||||||| |||||||||| ||||||||||||||||    
T  39965357 ttatagacatgattacattagagatcttttatcttatttattt 39965399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42079034 - 42079147
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| || |||||||||||||||||| ||| ||  ||| ||||||||||        || |||||||||||| |||| |||    
T  42079034 ttatagacaagattacattagaggtcttttatcttatttatttgtaacactt-tgtcttttatcttta-ttttttccgtttaggtcttttatctctcata 42079131  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  42079132 aaagcacatatacatc 42079147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 37724439 - 37724390
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| | |||||| ||||||||    
T  37724439 aaatccaaaaatatgatgaagatgttcatcatctgcatctttttcctttg 37724390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 39067401 - 39067450
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||| |||||||||||||||||| ||| || |||||||||||||||||    
T  39067401 aaatcctgaaatatgatgaagatgtccattatcttcatcttcttcctttg 39067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7575520 - 7575453
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||  |||| ||||||| || |||||||||||||||||| ||| ||  ||||||||||||||    
T  7575520 ttatagacaatattacattagaggtcttttatcttatttatttgtaacactttagtcctttatcttta 7575453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 12522464 - 12522409
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttt 67  Q
    |||||||||| | ||||||||||||||||||| | ||| || ||||||||||||||    
T  12522464 attaaattaggggtcctttatcttatttatttttaacactttggtcctttatcttt 12522409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 15153505 - 15153548
Alignment:
Q  25 tcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||| ||| || |||||||||||||||    
T  15153505 tcctttatcttatttatttgtaacactttggtcctttatcttta 15153548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15400817 - 15400750
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||| ||||||| ||||||| || ||| |||||||||||||| |||||| | || ||||||||||    
T  15400817 ttatagagatgattacattagaggtcatttttcttatttatttgtaacattttgatcttttatcttta 15400750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 3850130 - 3850167
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  3850130 tgaaaaaaatccaaaaatatgatgaagatgttcatcat 3850167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 207 - 240
Target Start/End: Original strand, 3850170 - 3850203
Alignment:
Q  207 tgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||| |||||||||||||||||    
T  3850170 tgaagatgttcatcatcttcatcttcttcctttg 3850203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 27550721 - 27550664
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| | ||||||||||||||||||||| ||| || | |||||||||||||    
T  27550721 gattacattaggggtcctttatcttatttatttgtaacactttgatcctttatcttta 27550664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 42079828 - 42079791
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  42079828 tgaaaaaaattcagaaatatgatgaagatgttcatcat 42079791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 3850023 - 3850059
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||| |||||||||||||||||||    
T  3850023 ttaggtcttttatctctcataaaagcacatatacatc 3850059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 15400054 - 15400082
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcat 219  Q
    |||||||||||||||||||||||||||||    
T  15400054 aaatccagaaatatgatgaagatgttcat 15400082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 15400734 - 15400698
Alignment:
Q  80 ttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||||||||||| |||||||||||||||||| |||||    
T  15400734 ttaggtcttttatctcttataaaagcacataaacatc 15400698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31031959 - 31031844
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        |||| |||||||||| ||||||||    
T  31031959 ttatagacatgattacattagagatcttttatcttatttatttgttacacttgggtcctttatctttattttttcccgctcaggtcttttatctcttata 31031860  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  31031859 aaagcacatatacatc 31031844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33706448 - 33706333
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||        ||||||||||||||| ||||||||    
T  33706448 ttatagacatgattacattagagatcctttatcttatttatttattacacttgggtcttttatctttatttttttccgcttaggtcttttatctcttata 33706349  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  33706348 aaagcacatatacatc 33706333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44510597 - 44510712
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||| |||||| |||||||||||||| |||||||||||| |||||||||||||        ||||||||||||||| ||||||||    
T  44510597 ttatagacatgattacattggagatcatttatcttatttatatgttacatttggatcctttatctttatttttttccgcttaggtcttttatctcttata 44510696  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  44510697 aaagcacatatacatc 44510712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30837936 - 30838050
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||        ||||||||||||||| ||||||||    
T  30837936 ttatagacatgattacattagagatcctttatcttatttatttgttacacttgagtcttttatcttta-ttttttccgcttaggtcttttatctcttata 30838034  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30838035 aaagcacatatacatc 30838050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 10774601 - 10774508
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    |||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||||||||||||||||||    
T  10774601 gatcttttatcttatttatttgttacatttgggtcctttatctttatttttttccgcttaggtcttttatctcttataaaagcacatatacatc 10774508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21097272 - 21097160
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta-nnnnnnnncgcttaggtcttttacctcttat 99  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||| |||||||    
T  21097272 ttatagacatgattacattagaggtcttttatcttatttatttgttacacttgggtcctttatctttattttttttccgcttaggtcttttatctcttat 21097173  T
Q  100 aaaagcacatata 112  Q
    |||||||||||||    
T  21097172 aaaagcacatata 21097160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7154741 - 7154626
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||  |||||| |||||||||||||||||||||| ||||||| ||||||||||        ||||| ||||||||| ||||||||    
T  7154741 ttatagacatgattacatatgagatcttttatcttatttatttgttacacttgggtcatttatctttatttttttccgctttggtcttttatctcttata 7154642  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  7154641 aaagcacatatacatc 7154626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 51088519 - 51088404
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||| || |||||||||||||||        || |||||||||||| ||||||||    
T  51088519 ttatagacatgattacattagagatcttttatcttatttatttgtaacactttggtcctttatctttatttttttccgtttaggtcttttatctcttata 51088420  T
Q  101 aaagcacatatacatc 116  Q
     |||||||||||||||    
T  51088419 taagcacatatacatc 51088404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 7154556 - 7154501
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7154556 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 7154501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14535529 - 14535643
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||||||||  ||||| ||| | ||||||||||||||||||||  |||||||||||||||||        ||||||||||||||| ||||||||    
T  14535529 ttatagacatgattacgttagaaatcatatatcttatttatttgttacacatgggtcctttatcttta-ttttttccgcttaggtcttttatctcttata 14535627  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  14535628 aaagcacatatacatc 14535643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7557404 - 7557287
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta--nnnnnnnncgcttaggtcttttacctctta 98  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||| |||||| |||||||||||||||           | |||||||||||| ||||||    
T  7557404 ttatagacatgattacattagaggtcctttttcttatttatttgtaacattttggtcctttatctttatttttttttctgtttaggtcttttatctctta 7557305  T
Q  99 taaaagcacatatacatc 116  Q
    ||||||||||||||||||    
T  7557304 taaaagcacatatacatc 7557287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 14535713 - 14535767
Alignment:
Q  186 gaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14535713 gaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 14535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 30838119 - 30838174
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  30838119 tgaaacaaatccagaaatataatgaagatgttcatcatcttcatcttcttcctttg 30838174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 31031777 - 31031722
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  31031777 tgaaacaaatccagaaatatgatgaagatgttcatcatcttcatcttctttctttg 31031722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 10774442 - 10774388
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10774442 tgaaacaaatccataaatatgatgaagatgttcatcatcttcatcttcttccttt 10774388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 25656927 - 25656976
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25656927 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 25656976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 33004832 - 33004881
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33004832 aaatccagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 33004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 33705692 - 33705747
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  33705692 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 33705747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 35956016 - 35955961
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  35956016 tgaaaaaaatccataaatatgatgaagatgttcatcatcttcatcttcttcctttg 35955961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36732376 - 36732309
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| | | || |||||||||||||||    
T  36732376 ttatagacatgattacattagaggtcctttatcttatttatttgtaaaactttggtcctttatcttta 36732309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 51088342 - 51088287
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  51088342 tgaaaaaaatccagaaatatgatgaagatgtccatcatcttcatcttcttcctttg 51088287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29520402 - 29520516
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||| || ||| |||||||||||        || ||||   ||||| ||||||||    
T  29520402 ttatagacatgattacattagagctcatttatcttatttatttgtaacactttggtgctttatctttattttttttcgtttagactttttatctcttata 29520501  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  29520502 aaagcacatatacat 29520516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 7154021 - 7154070
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  7154021 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 7154070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 10773830 - 10773879
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10773830 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 10773879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 14536323 - 14536274
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  14536323 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 14536274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 29648475 - 29648426
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29648475 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 29648426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 35955479 - 35955528
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  35955479 aaatcctgaaatatgatgaagatgttcatcatcttcatcttcttcctttg 35955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35956198 - 35956085
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||| | | | || |||| ||||||||||        || |||||||||||| ||||||||    
T  35956198 ttatagacatgattacattagaggtcatttatcttatttatttctaaaactttggtcatttatctttattttttt-cgtttaggtcttttatctcttata 35956100  T
Q  101 aaagcacatatacat 115  Q
    |||||||||||||||    
T  35956099 aaagcacatatacat 35956085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 36731727 - 36731776
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  36731727 aaatccagaaatatgatgaagatgttcatcatctttatcttcttcctttg 36731776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 44511340 - 44511291
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  44511340 aaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 44511291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 46123366 - 46123322
Alignment:
Q  196 cagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  46123366 cagaaatatgatgaagatgttcatcatcttcatcttcttcctttg 46123322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 29647748 - 29647863
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    |||||||||  |||| ||||||| ||||||||||||||||||| | ||  || | |||||||||||||        || ||||||||||||  |||||||    
T  29647748 ttatagacaaaattacattagaggtcctttatcttatttatttttaaccctttgatcctttatctttattattttccgtttaggtcttttatatcttata 29647847  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  29647848 aaagcacatatacatc 29647863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 29647916 - 29647971
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  29647916 tgaaaaaaatccagaaatatgatgaagatgttcatcaccttcatcttctttctttg 29647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30301175 - 30301290
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||| | ||||| |||| || | ||||||||||||||||||| |||  | |||||||||||||||        || |||||||||||| |||| |||    
T  30301175 ttatagataagattacattataggttctttatcttatttatttgtaacacgttggtcctttatctttatttttttccgtttaggtcttttatctctcata 30301274  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  30301275 aaagcacatatacatc 30301290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 7557222 - 7557172
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  7557222 tgaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttc 7557172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 29520584 - 29520634
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  29520584 tgaaaaaaatccagaaatatgatgaagatgttcatcatcttcatcatcttc 29520634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 14487723 - 14487682
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14487723 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 14487682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 21097083 - 21097042
Alignment:
Q  187 aaacaaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  21097083 aaacaaatccagaaatatgatgaagatgttcatcatcttcat 21097042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 36732267 - 36732226
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  36732267 aaatatgatgaagatgttcatcatcttcatcttcttcctttg 36732226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 52405687 - 52405736
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  52405687 aaattcagaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 52405736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 52407120 - 52407169
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  52407120 aaattcagaaatatgatgaaaatgttcatcatcttcatcttcttcctttg 52407169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 48128834 - 48128874
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  48128834 aaatatgatgaagatgttcatcatcttcatcttcttccttt 48128874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 51087655 - 51087700
Alignment:
Q  23 gatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||||||||||||||||||||| || | |||||||||||||    
T  51087655 gatcctttatcttatttatttgttacactttgatcctttatcttta 51087700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 51087783 - 51087832
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||| ||||||||||||||||||| | ||||| |||||||||||||||||    
T  51087783 aaatgcagaaatatgatgaagatgatgatcatcttcatcttcttcctttg 51087832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 47035841 - 47035797
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttc 235  Q
    ||||||| ||||| |||||| ||||||||||||||||||||||||    
T  47035841 aaatccaaaaataagatgaacatgttcatcattttcatcttcttc 47035797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Complemental strand, 29520948 - 29520917
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||||||||||||||||||||||    
T  29520948 aaatccagaaatatgatgaagatgttcatcat 29520917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 222
Target Start/End: Original strand, 30301376 - 30301407
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcat 222  Q
    ||||||||||||||||||||||||||||||||    
T  30301376 aaatccagaaatatgatgaagatgttcatcat 30301407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 33706264 - 33706209
Alignment:
Q  185 tgaaacaaatccagaaatatg-atgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||||||||||| ||||||  |||||||||||| |||| ||||||||||||||||    
T  33706264 tgaaacaaatccataaatatacatgaagatgttcctcatcttcatcttcttccttt 33706209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 220
Target Start/End: Original strand, 44510780 - 44510815
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatc 220  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44510780 tgaaacaaatcgagaaatatgatgaagatgttcatc 44510815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 46119317 - 46119363
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    |||||||||||||||||||   |||||||||| |||||||||||||||||    
T  46119317 aaatccagaaatatgatga---tgttcatcatcttcatcttcttcctttg 46119363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 48129484 - 48129445
Alignment:
Q  77 cgcttaggtcttttacctcttataaaagcacatatacatc 116  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  48129484 cgcttaggtcttttatctcttataaaagcacaaatacatc 48129445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12769509 - 12769396
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||| ||||| ||||||| |||||||||| ||||||||||  || || | || ||||||||||        || |||||||||||| |||| |||    
T  12769509 ttatagacaagattacattagaggtcctttatctaatttatttgtagcactttg-tcttttatctttattttttc-cgtttaggtcttttatctctcata 12769412  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  12769411 aaagcacatatacatc 12769396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 12769318 - 12769281
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  12769318 aaatccaaaaatatgatgaagatgttcatcatcttcat 12769281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 25656763 - 25656820
Alignment:
Q  11 gattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||| ||||| | ||||||||||||||||||||| ||| || | |||||||||||||    
T  25656763 gattacattaggggtcctttatcttatttatttgtaacactttgatcctttatcttta 25656820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 47036014 - 47035961
Alignment:
Q  12 attaaattagagatcctttatcttatttatttgttacatttgggtcctttatct 65  Q
    |||| ||||||| ||||||||||||||||||||| ||| || |||| |||||||    
T  47036014 attatattagaggtcctttatcttatttatttgtaacactttggtcgtttatct 47035961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 48129371 - 48129334
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  48129371 aaatccagaattatgatgaagatgttcatcatcttcat 48129334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 29521071 - 29521031
Alignment:
Q  28 tttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    |||||||||||||||||| |||||| |||| ||||||||||    
T  29521071 tttatcttatttatttgtaacattttggtcttttatcttta 29521031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 47035065 - 47035105
Alignment:
Q  199 aaatatgatgaagatgttcatcattttcatcttcttccttt 239  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  47035065 aaataagatgaacatgttcatcatcttcatcttcttccttt 47035105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 56382 - 56267
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||        ||||||||| ||||| ||||||||    
T  56382 ttatagacatgattacattagagatcatttatcttatttatttgttacacttgggtcctttatctttatttttttccgcttaggttttttagctcttata 56283  T
Q  101 aaagcacatatacatc 116  Q
    ||||||| ||||||||    
T  56282 aaagcacttatacatc 56267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4037 - 4152
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatctttannnnnnnncgcttaggtcttttacctcttata 100  Q
    ||||||||||||||| ||||||| || |||||||||||||||| | ||| || |||| ||||||||||        || |||||||||||| |||| |||    
T  4037 ttatagacatgattacattagaggtcttttatcttatttatttataacactttggtcttttatctttatttttttccgtttaggtcttttatctctcata 4136  T
Q  101 aaagcacatatacatc 116  Q
    ||||||||||||||||    
T  4137 aaagcacatatacatc 4152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 4757 - 4719
Alignment:
Q  196 cagaaatatgatgaagatgttcatcattttcatcttctt 234  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  4757 cagaaatatgatgaagatgtccatcattttcatcttctt 4719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 228
Target Start/End: Original strand, 4227 - 4264
Alignment:
Q  191 aaatccagaaatatgatgaagatgttcatcattttcat 228  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  4227 aaatccagaattatgatgaagatgttcatcatcttcat 4264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 4558 - 4613
Alignment:
Q  185 tgaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcctttg 240  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  4558 tgaaagaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcctttg 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 4373 - 4440
Alignment:
Q  1 ttatagacatgattaaattagagatcctttatcttatttatttgttacatttgggtcctttatcttta 68  Q
    ||||||||| ||||| ||||| | ||||||||||||||||||||| | | || |||||||||||||||    
T  4373 ttatagacaagattacattagtgttcctttatcttatttatttgtaaaactttggtcctttatcttta 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 4899 - 4863
Alignment:
Q  196 cagaaatatgatgaagatgttcatcattttcatcttc 232  Q
    ||||||||||||||||||||||||||| |||||||||    
T  4899 cagaaatatgatgaagatgttcatcatcttcatcttc 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 46371 - 46320
Alignment:
Q  186 gaaacaaatccagaaatatgatgaagatgttcatcattttcatcttcttcct 237  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  46371 gaaaaaaatccaaaaatatgatgaagatgttcatcatcttcatcttcttcct 46320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 45820 - 45856
Alignment:
Q  192 aatccagaaatatgatgaagatgttcatcattttcat 228  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  45820 aatccagaaatatgacgaagatgttcatcatcttcat 45856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University