View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2483_low_14 (Length: 265)
Name: NF2483_low_14
Description: NF2483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2483_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 254
Target Start/End: Original strand, 48951431 - 48951667
Alignment:
| Q |
18 |
accttctccttgagaaaaacaagcccaaataccagcaacttgaaacaacccctcctgaccacagtaaaccacatttaaaacccgaggagttaaatcctga |
117 |
Q |
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| T |
48951431 |
accttctccttgagaaaaacaagcccaaataccagcaacttgaaacaacccctcctgaccacagtaaaccacatttaaaactcgaggagttaaatcctga |
48951530 |
T |
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| Q |
118 |
acaagttgatcagacacatgaagcaccagaggtcagccaagttggttcggacgagccccttgagtcaggtgaattagaccctgttggctcatttatccta |
217 |
Q |
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| T |
48951531 |
acaagttgatcagacacatgaagcaccagaggtcagccaagttggttcggacgagccgcttgagtcacctgaattagaccctgttggctcatttatccta |
48951630 |
T |
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| Q |
218 |
gaaggtttgtaatcagctgggcactactactgttcat |
254 |
Q |
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| T |
48951631 |
gaaggtttgtaatcagctgggcactactactgttcat |
48951667 |
T |
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