View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2483_low_6 (Length: 418)

Name: NF2483_low_6
Description: NF2483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2483_low_6
NF2483_low_6
[»] chr1 (28 HSPs)
chr1 (16-318)||(6396006-6396303)
chr1 (346-417)||(6396308-6396379)
chr1 (365-418)||(21854482-21854535)
chr1 (363-414)||(28457369-28457420)
chr1 (363-418)||(40118733-40118788)
chr1 (365-418)||(27787489-27787542)
chr1 (366-418)||(5574277-5574329)
chr1 (365-417)||(11038262-11038314)
chr1 (374-418)||(11897183-11897227)
chr1 (193-241)||(12659097-12659144)
chr1 (366-418)||(18959005-18959057)
chr1 (363-415)||(21263023-21263075)
chr1 (363-403)||(27954241-27954281)
chr1 (363-418)||(23400007-23400062)
chr1 (363-418)||(37669396-37669451)
chr1 (363-418)||(41425240-41425295)
chr1 (368-418)||(835874-835924)
chr1 (364-418)||(27578181-27578235)
chr1 (193-242)||(12657954-12658003)
chr1 (366-403)||(18972443-18972480)
chr1 (365-402)||(19427521-19427558)
chr1 (365-402)||(21446241-21446278)
chr1 (365-418)||(39815346-39815399)
chr1 (365-417)||(3291444-3291496)
chr1 (365-409)||(13078843-13078887)
chr1 (365-409)||(41564907-41564951)
chr1 (365-417)||(49645362-49645414)
chr1 (366-418)||(52714979-52715031)
[»] chr5 (17 HSPs)
chr5 (183-255)||(19828048-19828120)
chr5 (172-239)||(6037274-6037341)
chr5 (365-418)||(24330000-24330053)
chr5 (364-418)||(27440478-27440532)
chr5 (204-241)||(8590270-8590307)
chr5 (365-418)||(14522982-14523035)
chr5 (365-418)||(25585474-25585527)
chr5 (365-418)||(29765830-29765883)
chr5 (365-417)||(3031834-3031886)
chr5 (366-418)||(30103469-30103521)
chr5 (365-418)||(16553504-16553557)
chr5 (365-418)||(34693234-34693287)
chr5 (365-418)||(38010872-38010925)
chr5 (365-418)||(39032622-39032675)
chr5 (204-264)||(8588950-8589010)
chr5 (365-409)||(18729316-18729360)
chr5 (365-409)||(31626103-31626147)
[»] chr8 (19 HSPs)
chr8 (179-249)||(8085547-8085617)
chr8 (81-154)||(2913649-2913722)
chr8 (365-418)||(37784392-37784445)
chr8 (94-154)||(2908743-2908803)
chr8 (363-418)||(27300344-27300399)
chr8 (364-418)||(5878797-5878851)
chr8 (365-418)||(5742675-5742728)
chr8 (364-417)||(21649187-21649240)
chr8 (365-418)||(28156203-28156256)
chr8 (365-418)||(32674250-32674303)
chr8 (183-240)||(33136922-33136979)
chr8 (365-418)||(36064030-36064083)
chr8 (365-418)||(4148673-4148726)
chr8 (365-418)||(18549979-18550032)
chr8 (365-410)||(22203241-22203286)
chr8 (365-418)||(34578395-34578448)
chr8 (365-418)||(35701845-35701898)
chr8 (373-418)||(42688435-42688480)
chr8 (211-255)||(7000991-7001035)
[»] chr6 (7 HSPs)
chr6 (177-255)||(16118540-16118618)
chr6 (179-249)||(32054944-32055015)
chr6 (182-241)||(32056501-32056559)
chr6 (365-418)||(34792022-34792075)
chr6 (356-418)||(3339517-3339579)
chr6 (206-243)||(10457921-10457958)
chr6 (365-418)||(11017383-11017436)
[»] chr4 (28 HSPs)
chr4 (179-249)||(41982617-41982687)
chr4 (382-418)||(28134389-28134425)
chr4 (363-418)||(55960698-55960753)
chr4 (365-418)||(8026771-8026824)
chr4 (365-418)||(31318753-31318806)
chr4 (365-418)||(35037609-35037662)
chr4 (365-418)||(53763829-53763882)
chr4 (364-404)||(6256481-6256521)
chr4 (362-418)||(7037502-7037558)
chr4 (365-417)||(29863551-29863603)
chr4 (205-273)||(32838982-32839050)
chr4 (363-418)||(4550332-4550387)
chr4 (363-418)||(9032778-9032833)
chr4 (365-416)||(26442410-26442461)
chr4 (363-402)||(28899238-28899277)
chr4 (360-418)||(3475864-3475922)
chr4 (365-418)||(1796366-1796419)
chr4 (365-418)||(3222989-3223042)
chr4 (365-418)||(9162066-9162119)
chr4 (365-402)||(37731926-37731963)
chr4 (365-418)||(44368220-44368273)
chr4 (365-418)||(45418067-45418120)
chr4 (365-418)||(50291282-50291335)
chr4 (365-418)||(53384345-53384398)
chr4 (365-418)||(54801505-54801558)
chr4 (204-244)||(1752957-1752997)
chr4 (363-418)||(3078925-3078981)
chr4 (365-409)||(23133564-23133608)
[»] chr3 (25 HSPs)
chr3 (364-418)||(38296680-38296734)
chr3 (367-418)||(38471644-38471695)
chr3 (179-265)||(53114246-53114333)
chr3 (364-418)||(30664502-30664556)
chr3 (208-273)||(1723244-1723309)
chr3 (364-418)||(14847536-14847590)
chr3 (365-418)||(2280177-2280230)
chr3 (365-418)||(33971883-33971936)
chr3 (365-418)||(36301226-36301279)
chr3 (365-418)||(42888790-42888843)
chr3 (365-418)||(48205045-48205098)
chr3 (365-417)||(9159055-9159107)
chr3 (362-418)||(11327105-11327161)
chr3 (363-418)||(16295462-16295517)
chr3 (363-418)||(17118395-17118450)
chr3 (367-418)||(25595942-25595993)
chr3 (206-273)||(27647887-27647954)
chr3 (363-418)||(42643233-42643288)
chr3 (364-418)||(1834505-1834559)
chr3 (364-418)||(48944728-48944782)
chr3 (363-417)||(54233487-54233541)
chr3 (365-418)||(7351656-7351709)
chr3 (365-418)||(9557940-9557993)
chr3 (365-418)||(14839063-14839116)
chr3 (365-418)||(29555856-29555909)
[»] chr2 (24 HSPs)
chr2 (179-273)||(26511054-26511148)
chr2 (206-269)||(9730634-9730702)
chr2 (363-418)||(13850202-13850257)
chr2 (177-222)||(4733069-4733115)
chr2 (364-417)||(11728140-11728193)
chr2 (365-418)||(30339993-30340046)
chr2 (365-418)||(34141442-34141495)
chr2 (365-418)||(40721771-40721824)
chr2 (364-418)||(5852473-5852527)
chr2 (364-418)||(25094351-25094405)
chr2 (368-418)||(28679131-28679181)
chr2 (365-418)||(3196105-3196158)
chr2 (205-242)||(3834296-3834333)
chr2 (365-418)||(12256901-12256954)
chr2 (365-418)||(20247885-20247938)
chr2 (365-418)||(27307249-27307302)
chr2 (365-402)||(27329132-27329169)
chr2 (363-403)||(1151526-1151566)
chr2 (365-417)||(12208442-12208494)
chr2 (365-417)||(19637229-19637281)
chr2 (365-417)||(19835822-19835874)
chr2 (362-402)||(24727423-24727463)
chr2 (365-417)||(27529529-27529581)
chr2 (381-417)||(43514908-43514944)
[»] chr7 (21 HSPs)
chr7 (364-418)||(30538625-30538679)
chr7 (364-418)||(41458918-41458972)
chr7 (364-418)||(44175544-44175598)
chr7 (357-418)||(2600552-2600613)
chr7 (365-418)||(28548239-28548292)
chr7 (179-255)||(30332451-30332527)
chr7 (363-418)||(33050181-33050236)
chr7 (363-418)||(45335860-45335915)
chr7 (179-240)||(5987715-5987777)
chr7 (364-418)||(11789709-11789763)
chr7 (364-418)||(27383941-27383995)
chr7 (364-418)||(37969930-37969984)
chr7 (365-418)||(1709284-1709337)
chr7 (365-418)||(35491429-35491482)
chr7 (365-418)||(47530309-47530362)
chr7 (365-418)||(48639401-48639454)
chr7 (365-417)||(11070228-11070280)
chr7 (365-417)||(24700121-24700173)
chr7 (365-417)||(33341144-33341196)
chr7 (366-418)||(34349045-34349097)
chr7 (363-415)||(40207821-40207873)
[»] scaffold0651 (1 HSPs)
scaffold0651 (365-418)||(4864-4917)
[»] scaffold0514 (1 HSPs)
scaffold0514 (363-418)||(1863-1918)
[»] scaffold0019 (1 HSPs)
scaffold0019 (365-418)||(72366-72419)
[»] scaffold0014 (1 HSPs)
scaffold0014 (365-418)||(145061-145114)
[»] scaffold0115 (1 HSPs)
scaffold0115 (363-403)||(35531-35571)


Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 318
Target Start/End: Original strand, 6396006 - 6396303
Alignment:
Q  16 aaaagaaggttataactatgtaataaaaatataagatatatctatcttctatgcatagtaaagctaattaataaaaaggatctacctagttaattagttg 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6396006 aaaagaaggttataactatgtaataaaaatataacatatatctatcttcaatgcatagtaaagctaaataataaaaaggacctacctagttaattagttg 6396105  T
Q  116 aaggcacatatatagtctagaaataagaatactaggatttcataaaaatgtaacatatatgttaaacatgcaaaagataataaataatagttaaacacat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6396106 aaggcacatatatagtctagaaataagaatactaggatttcataaaaatgtaacatatatgttaaacatgaaaaagataataaataatagttaaacacat 6396205  T
Q  216 tcttttattttttagcatttatttgacaatatcaaggatctctttgataaataagatatagatcaatttgatagtgagtgacaaaatttagagaccaact 315  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||    
T  6396206 tcttttattttttagcatttatttgactatatcagggatctctttgataaataagatatagatcaattt-----tgagtgacaaaatttagagaccaact 6396300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 346 - 417
Target Start/End: Original strand, 6396308 - 6396379
Alignment:
Q  346 tttttaatgaataactcatgagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    |||||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||| |||||||    
T  6396308 tttttaatgaataactcatgagaaatgatattggtacaaccattttggtacaacttttgtacaactttctct 6396379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 21854535 - 21854482
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||    
T  21854535 gagaaatgatatttgtacaattattttggtacaacttttgtacaactttctctc 21854482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 414
Target Start/End: Complemental strand, 28457420 - 28457369
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttc 414  Q
    ||||||||| |||||| |||||||||||||||||||||||| ||||| ||||    
T  28457420 atgagaaatgatatttgtacaatcattttggtacaacttttatacaactttc 28457369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 40118788 - 40118733
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| |||||||||||| ||| || |||||||||||||||||||    
T  40118788 atgagaaatgatatttgtacaatcatttttgtataatttttgtacaattttctctc 40118733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 27787489 - 27787542
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||||||||| || ||||||||||||||||||| | ||||||||    
T  27787489 gagaaatgatatttatacaaccaatttggtacaacttttgtacgactttctctc 27787542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 5574329 - 5574277
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  5574329 agaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctc 5574277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 11038262 - 11038314
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||||||||| |||||||||| || |||||||||| |||||||    
T  11038262 gagaaatgatatttatacaaccattttggtataatttttgtacaactttctct 11038314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 11897183 - 11897227
Alignment:
Q  374 tatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||    
T  11897183 tatttgtacaaccattttggtacaacttttgtacaactttctctc 11897227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 12659097 - 12659144
Alignment:
Q  193 taataaataatagttaaacacattcttttattttttagcatttatttga 241  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  12659097 taataaataa-agttaaacacattctttcagtttttagcatttatttga 12659144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 18959005 - 18959057
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||||||||| ||||||| ||||||||||  |||||||||||||    
T  18959005 agaaatgatatttatacaaccattttgttacaactttttgacaattttctctc 18959057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 21263023 - 21263075
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttct 415  Q
    ||||||||||||||||||||||  |||||| ||||||||||| |||| |||||    
T  21263023 atgagaaataatatttatacaactattttgatacaacttttgaacaactttct 21263075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 27954241 - 27954281
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaactttt 403  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  27954241 atgagaaatgatatttatacaatcatttttgtacaactttt 27954281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 23400062 - 23400007
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| ||||||  ||||||||||||||||| |||||||    
T  23400062 atgagaaatgatatttgtacaaccatttttatacaacttttgtacaatcttctctc 23400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 37669396 - 37669451
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||||||||||| ||||||||||  |||| ||||||||    
T  37669396 atgagaaatgatatttgtacaatcattttgatacaactttttaacaaatttctctc 37669451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 41425240 - 41425295
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| |||||  |||||||||||||||| |||||| ||||||||    
T  41425240 atgagaaatgatatttgtacaactattttggtacaactttcgtacaactttctctc 41425295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 835874 - 835924
Alignment:
Q  368 aaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||| |||||| ||||||||||||| ||||| |||||||||| ||||||||    
T  835874 aaatgatatttgtacaatcattttgttacaatttttgtacaactttctctc 835924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 27578181 - 27578235
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||| | ||||| ||||||||||||||| ||||||||    
T  27578181 tgagaaatgatatttgtacaattaatttgggacaacttttgtacaactttctctc 27578235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 12658003 - 12657954
Alignment:
Q  193 taataaataatagttaaacacattcttttattttttagcatttatttgac 242  Q
    |||| ||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  12658003 taattaattatatttaaacacattctttcattttttaggatttatttgac 12657954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 18972443 - 18972480
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaactttt 403  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  18972443 agaaattatatttatacaatcattttgatacaactttt 18972480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 402
Target Start/End: Original strand, 19427521 - 19427558
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttt 402  Q
    ||||||| |||||||||||| |||||||||||||||||    
T  19427521 gagaaatgatatttatacaaccattttggtacaacttt 19427558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 21446278 - 21446241
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttt 402  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  21446278 gagaaatgatatttatacaatcattttagtacaacttt 21446241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 39815346 - 39815399
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| ||||||| ||||||||||| |||| ||||||||    
T  39815346 gagaaattatatttgtacaaccattttgctacaacttttggacaactttctctc 39815399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 3291496 - 3291444
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||  |||||| | |||| ||||||||||||||||||||||||    
T  3291496 gagaaatgatattcgtacaattaatttgttacaacttttgtacaattttctct 3291444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Original strand, 13078843 - 13078887
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaa 409  Q
    ||||||| |||||||||||||||||||| ||||| ||||| ||||    
T  13078843 gagaaatgatatttatacaatcattttgatacaatttttgaacaa 13078887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 41564951 - 41564907
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaa 409  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||    
T  41564951 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaa 41564907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 49645362 - 49645414
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| || |||||||||   |||||||||||||||||||||||    
T  49645362 gagaaatgatatttgtataatcattttatgacaacttttgtacaattttctct 49645414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 418
Target Start/End: Original strand, 52714979 - 52715031
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||| |||||||||||||  ||||||||| ||||| ||||||||    
T  52714979 agaaatgatatttgtacaatcattttgtgacaacttttttacaactttctctc 52715031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 19828120 - 19828048
Alignment:
Q  183 atgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatcaaggatc 255  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||| |||| |||||    
T  19828120 atgcaaaagataataaataatagttaaacacattcttttagtttttagcatttacttaacaacatcatggatc 19828048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 6037341 - 6037274
Alignment:
Q  172 atatgttaaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttattt 239  Q
    |||| ||||||||||||||| |||||||||||||  ||| | ||||||||| ||||||||||||||||    
T  6037341 atattttaaacatgcaaaaggtaataaataataggcaaatatattcttttagtttttagcatttattt 6037274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 24330053 - 24330000
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||| ||||||||||||||||||||||| ||||||||    
T  24330053 gagaaatgatatttgtacaattattttggtacaacttttgtacaactttctctc 24330000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 27440478 - 27440532
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||||||||||  |||||||||| |||||||||||||    
T  27440478 tgagaaatgatatttgtacaatcattttgtgacaacttttgaacaattttctctc 27440532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 8590270 - 8590307
Alignment:
Q  204 agttaaacacattcttttattttttagcatttatttga 241  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8590270 agttaaacacattctttcattttttagcatttatttga 8590307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 14523035 - 14522982
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||||||||||| ||||||||||||||    
T  14523035 gagaaatgatatttgtacaaccatttttgtacaacttttttacaattttctctc 14522982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 25585527 - 25585474
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  25585527 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaatttctctc 25585474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 29765830 - 29765883
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  29765830 gagaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctc 29765883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 3031834 - 3031886
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||| |||||||    
T  3031834 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctct 3031886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 30103521 - 30103469
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||| |||||||||||| ||| || |||||||||||||||||||    
T  30103521 agaaatgatatttgtacaatcatttttgtataatttttgtacaattttctctc 30103469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 16553504 - 16553557
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||||||||||| ||||| |||| ||||| ||||||||    
T  16553504 gagaaatgatatttgtacaatcattttgctacaaattttttacaactttctctc 16553557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 34693287 - 34693234
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| ||| || ||||||||||| |||||||    
T  34693287 gagaaatgatatttgtacaatcatttttgtataatttttgtacaatcttctctc 34693234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 38010872 - 38010925
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  | ||||||||||||||||||||||    
T  38010872 gagaaatgatatttgtacaatcaatttgtgataacttttgtacaattttctctc 38010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 39032675 - 39032622
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  39032675 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctc 39032622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 8589010 - 8588950
Alignment:
Q  204 agttaaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgata 264  Q
    ||||||||||||||||| |  |||||| |||||||||| | |||||||||||  |||||||    
T  8589010 agttaaacacattctttcagattttagaatttatttgatactatcaaggatcaatttgata 8588950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 18729360 - 18729316
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaa 409  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||    
T  18729360 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaa 18729316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 31626147 - 31626103
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaa 409  Q
    ||||||| |||||| |||||||||||||||| || ||||||||||    
T  31626147 gagaaatgatatttgtacaatcattttggtataatttttgtacaa 31626103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 8085617 - 8085547
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatca 249  Q
    |||||| ||||||||| ||||||||||||||||||||| |||   ||||||||||||||||||||||||||    
T  8085617 aaacatccaaaagatagtaaataatagttaaacacattttttaggtttttagcatttatttgacaatatca 8085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 2913649 - 2913722
Alignment:
Q  81 aattaataaaaaggatctacctagttaattagttgaaggcacatatatagtctagaaataagaatactaggatt 154  Q
    |||||||||| ||||| |||||||||| |||||| ||||||||||||||||| ||||| | |||||||| ||||    
T  2913649 aattaataaataggatatacctagttagttagttcaaggcacatatatagtccagaaacaggaatactaagatt 2913722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 37784445 - 37784392
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||    
T  37784445 gagaaatgatatttgtacaaccattttggtataacttttgtacaattttctctc 37784392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 2908743 - 2908803
Alignment:
Q  94 gatctacctagttaattagttgaaggcacatatatagtctagaaataagaatactaggatt 154  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||| | ||| |||||||||    
T  2908743 gatctacctagttaattagttgaaggcacgtatatagttcagaaacaggaacactaggatt 2908803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 27300344 - 27300399
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  27300344 atgagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctc 27300399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 5878797 - 5878851
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||||||  |||||||||||||||||||||||  | |||||||||||    
T  5878797 tgagaaataatatttgaacaatcattttggtacaacttttaaataattttctctc 5878851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 5742728 - 5742675
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| ||| ||||    
T  5742728 gagaaatgatatttgtacaaccattttggtacaacttttgtacaactttatctc 5742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 21649240 - 21649187
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||| |||||||    
T  21649240 tgagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctct 21649187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 28156203 - 28156256
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| ||||||||||||| |||||||||| ||||||||    
T  28156203 gagaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctc 28156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 32674303 - 32674250
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||||||| ||||||||||||| ||||||||    
T  32674303 gagaaatgatatttgtacaaccattttggtataacttttgtacaactttctctc 32674250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 33136979 - 33136922
Alignment:
Q  183 atgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttg 240  Q
    ||||||||| ||||||||||  |||||||| ||| ||||| |||||||||||||||||    
T  33136979 atgcaaaaggtaataaataaccgttaaacatattattttaatttttagcatttatttg 33136922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 36064030 - 36064083
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||||  |||||||||| |||||||||||||    
T  36064030 gagaaatgatatttgtacaatcattttgtgacaacttttggacaattttctctc 36064083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 4148726 - 4148673
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| || || |||||| |||||||||||||||||| |||||||    
T  4148726 gagaaatgatatttgtataaccatttttgtacaacttttgtacaatattctctc 4148673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 18549979 - 18550032
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| ||| |||||||||||||  |||||||    
T  18549979 gagaaatgatatttgtacaatcatttttgtataacttttgtacaacattctctc 18550032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 22203286 - 22203241
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaat 410  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  22203286 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaat 22203241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 34578448 - 34578395
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||| |||||||| ||||    
T  34578448 gagaaatgatatttgtacaaccatttttgtacaacttttgaacaattttatctc 34578395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 35701898 - 35701845
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  35701898 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctc 35701845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 42688435 - 42688480
Alignment:
Q  373 atatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||||||||| ||| |||||||||| |||||||||||    
T  42688435 atatttgtacaatcatttttgtataacttttgtataattttctctc 42688480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 7000991 - 7001035
Alignment:
Q  211 cacattcttttattttttagcatttatttgacaatatcaaggatc 255  Q
    ||||| |||||| | |||| |||||||||||||||||||||||||    
T  7000991 cacatgcttttagtgtttaacatttatttgacaatatcaaggatc 7001035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 16118540 - 16118618
Alignment:
Q  177 ttaaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatcaaggatc 255  Q
    ||||||||| ||||| ||||||||||| |||||||| ||||||||| |||||  ||||||||||||| |||||||||||    
T  16118540 ttaaacatggaaaaggtaataaataatggttaaacatattcttttagtttttgacatttatttgacagtatcaaggatc 16118618  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 32055015 - 32054944
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattct-tttattttttagcatttatttgacaatatca 249  Q
    ||||||||||| |||||||||||| ||||||||||||| | |||  ||||| ||||||||||||||||||||    
T  32055015 aaacatgcaaatgataataaataacagttaaacacattttattttatttttcgcatttatttgacaatatca 32054944  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 32056501 - 32056559
Alignment:
Q  182 catgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttga 241  Q
    |||||||||| |||| | ||| ||||||||||||||||||| ||||||||||||||||||    
T  32056501 catgcaaaaggtaatga-taagagttaaacacattcttttagtttttagcatttatttga 32056559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 34792022 - 34792075
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  34792022 gagaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctc 34792075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 418
Target Start/End: Complemental strand, 3339579 - 3339517
Alignment:
Q  356 ataactcatgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| | ||||||| |||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  3339579 ataactaaagagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctc 3339517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 10457921 - 10457958
Alignment:
Q  206 ttaaacacattcttttattttttagcatttatttgaca 243  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  10457921 ttaaacacattcttttagtttttaacatttatttgaca 10457958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 11017383 - 11017436
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||||| |||||||| || |  ||||||||||||||| ||||||||    
T  11017383 gagaaataatatttgtacaatcaattcgtgacaacttttgtacaactttctctc 11017436  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 41982617 - 41982687
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatca 249  Q
    ||||||| ||||| |||||||||| |||||||||  |||||||| |||||||||||||||||||| |||||    
T  41982617 aaacatgtaaaaggtaataaataacagttaaacatgttcttttagtttttagcatttatttgacagtatca 41982687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 418
Target Start/End: Original strand, 28134389 - 28134425
Alignment:
Q  382 caatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||||||||||||||||||||||||||||    
T  28134389 caatcattttggtacaacttttgtacaattttctctc 28134425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 55960698 - 55960753
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| || || |||||||||| ||||||||||||||||||||||    
T  55960698 atgagaaatgatatttgtataaccattttggtataacttttgtacaattttctctc 55960753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 8026824 - 8026771
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||||| ||||||||    
T  8026824 gagaaatgatatttatacaatcaatttgtgacaacttttgtacaactttctctc 8026771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 31318753 - 31318806
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| ||||||||||||| |||||||||| ||||||||    
T  31318753 gagaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctc 31318806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 35037609 - 35037662
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| ||||||| ||||||||||||||||| |||||||    
T  35037609 gagaaatgatatttgtacaaccattttgatacaacttttgtacaatattctctc 35037662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 53763882 - 53763829
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||    
T  53763882 gagaaattatatttgtacaatcattttgctacaacttttggacaactttctctc 53763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 6256521 - 6256481
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttg 404  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  6256521 tgagaaataatatttgtacaatcatttttgtacaacttttg 6256481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 418
Target Start/End: Complemental strand, 7037558 - 7037502
Alignment:
Q  362 catgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||| |||||| ||||| || ||||  ||||||||||||||||||||||||    
T  7037558 catgagaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctc 7037502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 29863551 - 29863603
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||||||| ||||||||||||| |||||||    
T  29863551 gagaaatgatatttgtacaaccattttggtataacttttgtacaactttctct 29863603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 32838982 - 32839050
Alignment:
Q  205 gttaaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgataaataagata 273  Q
    |||||||||||||||| | |||||||||||||||||||  ||||| |||||  |||||||  |||||||    
T  32838982 gttaaacacattctttcaatttttagcatttatttgacggtatcatggatcaatttgatagttaagata 32839050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 4550332 - 4550387
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||||||||||| ||||||||||  |||| ||||||||    
T  4550332 atgagaaatgatatttgtacaatcattttgctacaactttttaacaactttctctc 4550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 9032778 - 9032833
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| |||||||| ||||  ||||||||||||||| ||||||||    
T  9032778 atgagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctc 9032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 365 - 416
Target Start/End: Complemental strand, 26442461 - 26442410
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctc 416  Q
    ||||||| |||||| ||||| ||||||||||||||||||| |||| ||||||    
T  26442461 gagaaatgatatttgtacaaccattttggtacaacttttgcacaactttctc 26442410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 28899277 - 28899238
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttt 402  Q
    ||||||||| |||||| |||||||||||||||||||||||    
T  28899277 atgagaaatgatatttgtacaatcattttggtacaacttt 28899238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 418
Target Start/End: Original strand, 3475864 - 3475922
Alignment:
Q  360 ctcatgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||| |||||| ||||| ||||||   ||||||||||||||| ||||||||    
T  3475864 ctcatgagaaatgatatttgtacaaccattttatgacaacttttgtacaactttctctc 3475922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 1796366 - 1796419
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| || ||||  ||||||||||||||||||||||||    
T  1796366 gagaaatgatatttgtacaaccaatttgtgacaacttttgtacaattttctctc 1796419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 3222989 - 3223042
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  ||||||||||||||| ||||||||    
T  3222989 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctc 3223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 9162066 - 9162119
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||||  |||||||||  |||||||||||||    
T  9162066 gagaaatgatatttgtacaatcattttgtgacaactttttgacaattttctctc 9162119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 402
Target Start/End: Original strand, 37731926 - 37731963
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttt 402  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaacttt 37731963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 44368273 - 44368220
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  ||||||||||||||| ||||||||    
T  44368273 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctc 44368220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 45418067 - 45418120
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| || || |||||||||||||||||| ||||| ||||||||    
T  45418067 gagaaatgatatttgtataaccattttggtacaacttttctacaactttctctc 45418120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 50291282 - 50291335
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| ||||||||||| |||||  |||||||    
T  50291282 gagaaatgatatttgtacaatcatttttgtacaacttttatacaaccttctctc 50291335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 53384398 - 53384345
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  | ||||||||||||||||||||||    
T  53384398 gagaaatgatatttgtacaatcaatttgtaataacttttgtacaattttctctc 53384345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 54801558 - 54801505
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||||||||||  || || |||||||||||||||||||    
T  54801558 gagaaatgatatttgtacaatcattttattataatttttgtacaattttctctc 54801505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 1752997 - 1752957
Alignment:
Q  204 agttaaacacattcttttattttttagcatttatttgacaa 244  Q
    ||||||||||||| ||||| |||||| ||||||||||||||    
T  1752997 agttaaacacatttttttagtttttatcatttatttgacaa 1752957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 3078981 - 3078925
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgt-acaattttctctc 418  Q
    ||||||||| |||||| |||||||||||||  ||||||||||| |||| ||||||||    
T  3078981 atgagaaatgatatttgtacaatcattttgtaacaacttttgtgacaactttctctc 3078925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 409
Target Start/End: Complemental strand, 23133608 - 23133564
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaa 409  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||    
T  23133608 gagaaattatatttgtacaaccatttttgtacaacttttgtacaa 23133564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 38296734 - 38296680
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  38296734 tgagaaataatatttgtacaaccattttagtacaacttttgtacaattttctctc 38296680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 38471644 - 38471695
Alignment:
Q  367 gaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  38471644 gaaatgatatttgtacaaccattttggtacaacttttgtacaattttctctc 38471695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 53114246 - 53114333
Alignment:
Q  179 aaacatgcaaaagataataaataat-agttaaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgataa 265  Q
    ||||||||||| | ||||||||||  |||||||||| |||||||| ||||||||||||| | |||||||||| |||| | ||||||||    
T  53114246 aaacatgcaaatggtaataaataaacagttaaacacgttcttttagtttttagcatttaatagacaatatcagggatttgtttgataa 53114333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 30664502 - 30664556
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||| ||||||||    
T  30664502 tgagaaatgatatttgtacaatcatttttgtacaacttttgtacaactttctctc 30664556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 1723309 - 1723244
Alignment:
Q  208 aaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgataaataagata 273  Q
    ||||| ||| ||||| |||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  1723309 aaacatattattttagtttttagcatttatttgacagtatcaaggatcaatttgatatataagata 1723244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 14847590 - 14847536
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| | ||| ||||||||||||||||||||| |||||||||||    
T  14847590 tgagaaatgatatttgtgcaaccattttggtacaacttttgtataattttctctc 14847536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 2280177 - 2280230
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  2280177 gagaaatgatatttgtacaaccattttagtacaacttttgtacaactttctctc 2280230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 33971883 - 33971936
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||||||||| |||| | ||||||||||||||||||||| ||||    
T  33971883 gagaaatgatatttatacaaccattcttgtacaacttttgtacaattttatctc 33971936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 36301279 - 36301226
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||| |||||||| ||||||||||||||||| ||||||||    
T  36301279 gagaaattatatttgtacgatcatttttgtacaacttttgtacaactttctctc 36301226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 42888843 - 42888790
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||  |||||| ||||||||||||||||||||||||||    
T  42888843 gagaaatgatatttgtacagccatttttgtacaacttttgtacaattttctctc 42888790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 48205045 - 48205098
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| ||| || |||||||||||||||||||    
T  48205045 gagaaatgatatttgtacaatcatttttgtataatttttgtacaattttctctc 48205098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 9159107 - 9159055
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| |||||| ||||||||||||||||||    
T  9159107 gagaaatgatatttgtacaaccatttttgtacaatttttgtacaattttctct 9159055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 418
Target Start/End: Original strand, 11327105 - 11327161
Alignment:
Q  362 catgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||| |||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  11327105 catgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctc 11327161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 16295462 - 16295517
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| || |||| |||||||||||||||| ||||||||    
T  16295462 atgagaaatgatatttgtacaaccaatttgatacaacttttgtacaactttctctc 16295517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 17118395 - 17118450
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||| |||| |||||| ||||| |||||| ||||||||||||||||||||| ||||    
T  17118395 atgaaaaatgatatttgtacaaccatttttgtacaacttttgtacaattttttctc 17118450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 25595942 - 25595993
Alignment:
Q  367 gaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||| |||||| |||||  |||||||||||||||||||| |||||||||||    
T  25595942 gaaatgatatttgtacaactattttggtacaacttttgtataattttctctc 25595993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 27647887 - 27647954
Alignment:
Q  206 ttaaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgataaataagata 273  Q
    ||||||| ||||||||  |||||||||||||||||||||||| ||| |||  |||||||  |||||||    
T  27647887 ttaaacatattctttttatttttagcatttatttgacaatattaagtatcaatttgatagttaagata 27647954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 42643233 - 42643288
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| || ||||| ||||||||||||||| ||||||||    
T  42643233 atgagaaatgatatttgtacaaccaatttggaacaacttttgtacaactttctctc 42643288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 1834505 - 1834559
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||||||||| ||||| ||||||| ||||| ||||| |||| ||||||||    
T  1834505 tgagaaataatatttgtacaaccattttgctacaatttttgaacaactttctctc 1834559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 48944782 - 48944728
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| ||||| ||||||   ||||||||||||||||||||||||    
T  48944782 tgagaaatgatatttgtacaaccattttctaacaacttttgtacaattttctctc 48944728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 54233541 - 54233487
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||||| |||||| ||||| ||||||  |||||||||||||||| |||||||    
T  54233541 atgagaaatgatatttgtacaaccatttttttacaacttttgtacaactttctct 54233487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 7351709 - 7351656
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||| || |||||||||||||||||||    
T  7351709 gagaaatgatatttgtacaaccatttttgtataatttttgtacaattttctctc 7351656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 9557993 - 9557940
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| ||||||||||||  |||||| ||||| |||||||||| ||||||||    
T  9557993 gagaaatgatatttatacaacaattttgatacaatttttgtacaactttctctc 9557940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 14839116 - 14839063
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  14839116 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctc 14839063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 29555909 - 29555856
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||||| ||||| |||||| ||| |||||||||||||  |||||||    
T  29555909 gagaaataatatttgtacaaccatttttgtataacttttgtacaaccttctctc 29555856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 26511148 - 26511054
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatcaaggatctctttgataaataagata 273  Q
    ||||||||| ||  |||||||||||||||||| |  |||||||| ||||||| ||||||||||||  ||||||||||  ||| |||| |||||||    
T  26511148 aaacatgcagaatgtaataaataatagttaaatatgttcttttagtttttagtatttatttgacagcatcaaggatcagtttaataattaagata 26511054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 9730702 - 9730634
Alignment:
Q  206 ttaaacacattcttttatt-----ttttagcatttatttgacaatatcaaggatctctttgataaataa 269  Q
    ||||||||||| |||||||     |||||||||||||||||||||||||||||||  ||||||||||||    
T  9730702 ttaaacacattattttattttaggttttagcatttatttgacaatatcaaggatcaatttgataaataa 9730634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 13850257 - 13850202
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||||||||||||||||| || || |||||||||| ||||||||    
T  13850257 atgagaaatgatatttatacaatcattttgatataatttttgtacaactttctctc 13850202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 4733069 - 4733115
Alignment:
Q  177 ttaaacatgcaaaagataataaataatagtt-aaacacattctttta 222  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||    
T  4733069 ttaaacatgcaaaagataataaataacagttaaaacacattctttta 4733115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 364 - 417
Target Start/End: Complemental strand, 11728193 - 11728140
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    |||||||| || ||| ||||| |||||||||||||||||||||||| |||||||    
T  11728193 tgagaaatgatgtttgtacaaccattttggtacaacttttgtacaactttctct 11728140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 30339993 - 30340046
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  30339993 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctc 30340046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 34141442 - 34141495
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  34141442 gagaaatgatatttgtacaatcatttttgtacaacttttgtacaaccttctctc 34141495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 40721771 - 40721824
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||  |||||||||||||||||||||||| ||||||||    
T  40721771 gagaaatgatatttgtacagccattttggtacaacttttgtacaactttctctc 40721824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 5852473 - 5852527
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  5852473 tgagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctc 5852527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 25094351 - 25094405
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| || || ||||||||||||| |||||||||| ||||||||    
T  25094351 tgagaaatgatatttgtataaccattttggtacaatttttgtacaactttctctc 25094405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Original strand, 28679131 - 28679181
Alignment:
Q  368 aaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||| |||||| |||||||||||| |||||||||||||||||  |||||||    
T  28679131 aaatgatatttgtacaatcatttttgtacaacttttgtacaacattctctc 28679181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 3196158 - 3196105
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  ||||||||||||||| ||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctc 3196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 3834296 - 3834333
Alignment:
Q  205 gttaaacacattcttttattttttagcatttatttgac 242  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  3834296 gttaaaaacattcttttaatttttagcatttatttgac 3834333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 12256901 - 12256954
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||||||| ||| |||||||||||||  |||||||    
T  12256901 gagaaatgatatttgtacaatcatttttgtataacttttgtacaaccttctctc 12256954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 20247938 - 20247885
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||||||||| || ||  |||||||||| |||||||||||| ||||||||    
T  20247938 gagaaataatatttgtataactattttggtacgacttttgtacaactttctctc 20247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 27307302 - 27307249
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||||| ||||  ||||||||||||||| ||||||||    
T  27307302 gagaaatgatatttgtacaatcaatttgtgacaacttttgtacaactttctctc 27307249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 27329169 - 27329132
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttt 402  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  27329169 gagaaatgatatttgtacaatcattttggtacaacttt 27329132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 1151526 - 1151566
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaactttt 403  Q
    ||||||||| |||||| |||||| |||||||||||||||||    
T  1151526 atgagaaattatatttgtacaattattttggtacaactttt 1151566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 12208442 - 12208494
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| |||||||||||||| || |||||||    
T  12208442 gagaaatgatatttgtacaaccatttttgtacaacttttgtataactttctct 12208494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 19637229 - 19637281
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| ||| ||||||||||||| |||||||    
T  19637229 gagaaatgatatttgtacaaccatttttgtataacttttgtacaactttctct 19637281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 19835822 - 19835874
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| ||| ||||||||||||| |||||||    
T  19835822 gagaaatgatatttgtacaaccatttttgtataacttttgtacaactttctct 19835874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 24727423 - 24727463
Alignment:
Q  362 catgagaaataatatttatacaatcattttggtacaacttt 402  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  24727423 catgagaaatgatatttgtacaaccattttggtacaacttt 24727463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 27529529 - 27529581
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| || || |||||| ||||||||||||||||| |||||||    
T  27529529 gagaaatgatatttgtagaaccatttttgtacaacttttgtacaactttctct 27529581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 417
Target Start/End: Original strand, 43514908 - 43514944
Alignment:
Q  381 acaatcattttggtacaacttttgtacaattttctct 417  Q
    |||| |||||||||||||||||| |||||||||||||    
T  43514908 acaaccattttggtacaacttttatacaattttctct 43514944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 30538625 - 30538679
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||  ||||||||||||||||||||||| ||||||||    
T  30538625 tgagaaatgatatttgtacaacaattttggtacaacttttgtacaactttctctc 30538679  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 41458972 - 41458918
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||| ||||||||    
T  41458972 tgagaaataatatttgtacaaccattttagtacaatttttgtacaactttctctc 41458918  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 44175544 - 44175598
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||||||||| |||||||||||||  | ||||||||||||| ||||||||    
T  44175544 tgagaaataatatttgtacaatcattttgtgataacttttgtacaactttctctc 44175598  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 418
Target Start/End: Complemental strand, 2600613 - 2600552
Alignment:
Q  357 taactcatgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||| |||||||||| |||||| ||||| |||||| ||||||||||||||||| ||| ||||    
T  2600613 taacacatgagaaatgatatttgtacaaccattttagtacaacttttgtacaactttttctc 2600552  T

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Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 28548292 - 28548239
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| |||||  ||||||||||||||||||||||| ||||||||    
T  28548292 gagaaatgatatttgtacaactattttggtacaacttttgtacaactttctctc 28548239  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 30332527 - 30332451
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattcttttattttttagcatttatttgacaatatcaaggatc 255  Q
    ||||| ||||||  ||| |||||| | ||||||||||||||| | |||||| ||||||||||||| |||||| ||||    
T  30332527 aaacacgcaaaatttaacaaataacatttaaacacattctttcagtttttaacatttatttgacagtatcaatgatc 30332451  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 33050181 - 33050236
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  33050181 atgagaaatgatatttgtacaaccattttgtgacaacttttgtacaactttctctc 33050236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Original strand, 45335860 - 45335915
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||| |||| |||||| ||||| |||||| ||||||||||||||||| ||||||||    
T  45335860 atgaaaaatgatatttgtacaaccatttttgtacaacttttgtacaactttctctc 45335915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 5987715 - 5987777
Alignment:
Q  179 aaacatgcaaaagataataaataatagttaaacacattctttt-attttttagcatttatttg 240  Q
    ||||||||||||| |||||||||| ||| ||||||||| |||| | | |||||||||||||||    
T  5987715 aaacatgcaaaaggtaataaataacagtcaaacacatttttttaaatgtttagcatttatttg 5987777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 11789763 - 11789709
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| ||||| |||||| ||||||||||||||||| ||| ||||    
T  11789763 tgagaaatgatatttgtacaaccattttagtacaacttttgtacaactttgtctc 11789709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Complemental strand, 27383995 - 27383941
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||||| ||| |||||| ||||||| |||||||||||    
T  27383995 tgagaaatgatatttgtacaatcactttagtacaatttttgtataattttctctc 27383941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 418
Target Start/End: Original strand, 37969930 - 37969984
Alignment:
Q  364 tgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||||| |||||| |||||  |||||| |||||||||||||||| ||||||||    
T  37969930 tgagaaatgatatttgtacaactattttgatacaacttttgtacaactttctctc 37969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 1709284 - 1709337
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||| | |||||||||||| |||||| ||||||||||| |||||||    
T  1709284 gagaaatgatatctgtacaatcatttttgtacaatttttgtacaatattctctc 1709337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 35491482 - 35491429
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| || || |||||  ||||||||||||||||||||||||||    
T  35491482 gagaaatgatatttgtataaccatttatgtacaacttttgtacaattttctctc 35491429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 47530362 - 47530309
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||||||||| ||||||   |||||||||| |||||||||||||    
T  47530362 gagaaatgatatttatacaaccattttatgacaacttttgaacaattttctctc 47530309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 48639454 - 48639401
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  48639454 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaaccttctctc 48639401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 11070228 - 11070280
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| ||||| |||||| ||| ||||||||||||| |||||||    
T  11070228 gagaaatgatatttgtacaaccattttagtataacttttgtacaactttctct 11070280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Original strand, 24700121 - 24700173
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| |||||||||||||  ||||||||| ||||| |||||||    
T  24700121 gagaaatgatatttgtacaatcattttgtaacaacttttttacaactttctct 24700173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 417
Target Start/End: Complemental strand, 33341196 - 33341144
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctct 417  Q
    ||||||| |||||| |||||  ||||| ||| |||||||||||||||||||||    
T  33341196 gagaaatgatatttgtacaacaattttagtataacttttgtacaattttctct 33341144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 418
Target Start/End: Complemental strand, 34349097 - 34349045
Alignment:
Q  366 agaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    |||||| |||||| ||||| |||||| |||||||||||  |||||||||||||    
T  34349097 agaaatgatatttgtacaaccatttttgtacaactttttgacaattttctctc 34349045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 415
Target Start/End: Complemental strand, 40207873 - 40207821
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttct 415  Q
    ||||||||| |||||| |||||  ||||| |||||||||||||| ||||||||    
T  40207873 atgagaaatgatatttgtacaactatttttgtacaacttttgtataattttct 40207821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 418
Target Start/End: Complemental strand, 4917 - 4864
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| ||||||||||||| |||||||||| ||||||||    
T  4917 gagaaatgatatttgtacaaccattttggtacaatttttgtacaactttctctc 4864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 363 - 418
Target Start/End: Complemental strand, 1918 - 1863
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||||| |||||| ||||| |||||| ||| |||||||||||||| |||||||    
T  1918 atgagaaatgatatttgtacaaccatttttgtataacttttgtacaatcttctctc 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 72366 - 72419
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||||  |||||||||| |||||||||||||    
T  72366 gagaaatgatatttgtacaaccattttgcaacaacttttgaacaattttctctc 72419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 365 - 418
Target Start/End: Original strand, 145061 - 145114
Alignment:
Q  365 gagaaataatatttatacaatcattttggtacaacttttgtacaattttctctc 418  Q
    ||||||| |||||| ||||| |||||| |||||||||||||||||  |||||||    
T  145061 gagaaatgatatttgtacaaccatttttgtacaacttttgtacaacattctctc 145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 35571 - 35531
Alignment:
Q  363 atgagaaataatatttatacaatcattttggtacaactttt 403  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  35571 atgagaaatgatatttgtacaatcattttgctacaactttt 35531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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