View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2484_low_4 (Length: 410)

Name: NF2484_low_4
Description: NF2484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2484_low_4
NF2484_low_4
[»] chr5 (30 HSPs)
chr5 (12-264)||(13694504-13694755)
chr5 (11-253)||(26171331-26171573)
chr5 (11-253)||(29720939-29721181)
chr5 (11-264)||(534312-534565)
chr5 (12-253)||(34478825-34479066)
chr5 (12-253)||(6745700-6745941)
chr5 (12-253)||(10750330-10750571)
chr5 (12-264)||(31543354-31543606)
chr5 (11-253)||(9788583-9788825)
chr5 (12-264)||(15356255-15356507)
chr5 (12-264)||(23665667-23665919)
chr5 (12-253)||(18467316-18467557)
chr5 (11-155)||(42427793-42427937)
chr5 (39-253)||(658650-658864)
chr5 (11-257)||(27911060-27911306)
chr5 (56-253)||(40380680-40380877)
chr5 (11-147)||(16408005-16408141)
chr5 (12-264)||(20043606-20043857)
chr5 (11-159)||(33790673-33790821)
chr5 (56-253)||(16545001-16545201)
chr5 (11-159)||(25806187-25806335)
chr5 (11-133)||(18510819-18510941)
chr5 (11-159)||(37557205-37557353)
chr5 (11-159)||(31397573-31397721)
chr5 (60-159)||(27449229-27449328)
chr5 (60-159)||(43598139-43598238)
chr5 (60-159)||(43603631-43603730)
chr5 (60-159)||(43609123-43609222)
chr5 (56-133)||(2239871-2239948)
chr5 (60-164)||(34842023-34842127)
[»] chr8 (19 HSPs)
chr8 (11-264)||(34255868-34256121)
chr8 (11-196)||(4732279-4732464)
chr8 (12-253)||(15069254-15069495)
chr8 (12-253)||(27827672-27827913)
chr8 (12-264)||(18811384-18811636)
chr8 (12-264)||(43080278-43080530)
chr8 (12-216)||(31577700-31577903)
chr8 (11-258)||(5591445-5591691)
chr8 (12-158)||(17848308-17848454)
chr8 (11-159)||(35744748-35744896)
chr8 (11-159)||(10684845-10684993)
chr8 (11-159)||(41383434-41383582)
chr8 (12-159)||(21481277-21481424)
chr8 (60-159)||(18853744-18853843)
chr8 (60-159)||(6813100-6813199)
chr8 (57-97)||(7099960-7100000)
chr8 (63-155)||(26300748-26300840)
chr8 (106-146)||(10380558-10380598)
chr8 (62-142)||(32429287-32429367)
[»] chr6 (22 HSPs)
chr6 (11-264)||(5408431-5408684)
chr6 (11-264)||(5412756-5413009)
chr6 (12-161)||(12936655-12936804)
chr6 (12-242)||(17012706-17012935)
chr6 (11-264)||(12157872-12158125)
chr6 (12-159)||(33309615-33309762)
chr6 (12-242)||(25462871-25463101)
chr6 (17-159)||(30444019-30444161)
chr6 (12-253)||(26931969-26932210)
chr6 (39-159)||(3395122-3395242)
chr6 (12-253)||(16553240-16553481)
chr6 (12-253)||(16629796-16630037)
chr6 (56-253)||(34165448-34165645)
chr6 (39-159)||(3631376-3631496)
chr6 (12-159)||(26067801-26067948)
chr6 (12-196)||(16651557-16651741)
chr6 (12-126)||(12910979-12911093)
chr6 (39-159)||(15534035-15534155)
chr6 (48-161)||(26944248-26944361)
chr6 (60-159)||(33331027-33331126)
chr6 (60-159)||(14738153-14738252)
chr6 (170-242)||(11137214-11137286)
[»] chr4 (33 HSPs)
chr4 (11-216)||(10113581-10113786)
chr4 (11-264)||(52094724-52094977)
chr4 (11-258)||(5872374-5872621)
chr4 (12-264)||(16933554-16933806)
chr4 (12-264)||(22134023-22134275)
chr4 (12-242)||(22782143-22782373)
chr4 (12-159)||(12402502-12402649)
chr4 (12-264)||(11007974-11008226)
chr4 (12-264)||(22046121-22046373)
chr4 (11-157)||(12743290-12743436)
chr4 (56-253)||(5136656-5136853)
chr4 (56-253)||(7123272-7123469)
chr4 (15-216)||(26558310-26558511)
chr4 (12-264)||(12395266-12395517)
chr4 (12-264)||(12400228-12400479)
chr4 (56-253)||(8393983-8394179)
chr4 (20-253)||(18536918-18537151)
chr4 (11-147)||(5207025-5207161)
chr4 (11-159)||(36920903-36921051)
chr4 (11-159)||(47563535-47563683)
chr4 (56-146)||(4588623-4588713)
chr4 (11-159)||(14788838-14788986)
chr4 (12-159)||(9175878-9176025)
chr4 (45-159)||(3578133-3578247)
chr4 (11-253)||(22802142-22802384)
chr4 (57-154)||(42191445-42191542)
chr4 (60-159)||(9224985-9225084)
chr4 (11-253)||(16453989-16454231)
chr4 (60-159)||(16624586-16624685)
chr4 (79-253)||(36378970-36379144)
chr4 (45-102)||(5350578-5350635)
chr4 (11-77)||(3501875-3501941)
chr4 (179-264)||(5350453-5350539)
[»] chr3 (41 HSPs)
chr3 (12-253)||(43226688-43226929)
chr3 (11-264)||(7762824-7763077)
chr3 (12-253)||(10957729-10957970)
chr3 (12-257)||(456514-456759)
chr3 (11-264)||(37407242-37407495)
chr3 (12-264)||(5192250-5192502)
chr3 (12-264)||(5898009-5898261)
chr3 (12-253)||(6065199-6065440)
chr3 (12-253)||(18098577-18098817)
chr3 (11-242)||(29811444-29811675)
chr3 (11-253)||(5259684-5259926)
chr3 (12-159)||(7769260-7769407)
chr3 (11-242)||(23199500-23199731)
chr3 (12-253)||(23634057-23634297)
chr3 (12-159)||(11168806-11168953)
chr3 (11-253)||(3315293-3315535)
chr3 (15-253)||(10209765-10210003)
chr3 (12-147)||(4309916-4310051)
chr3 (12-155)||(27421347-27421490)
chr3 (11-264)||(9635485-9635738)
chr3 (11-216)||(15830603-15830807)
chr3 (11-258)||(22834370-22834616)
chr3 (56-155)||(32891752-32891851)
chr3 (11-253)||(6717077-6717319)
chr3 (11-145)||(15822047-15822181)
chr3 (11-253)||(53917079-53917321)
chr3 (56-253)||(4600126-4600323)
chr3 (56-253)||(10056809-10057006)
chr3 (56-253)||(10061253-10061450)
chr3 (56-253)||(10063475-10063672)
chr3 (56-253)||(10065697-10065894)
chr3 (13-264)||(1619882-1620132)
chr3 (63-253)||(10059031-10059221)
chr3 (60-258)||(23409742-23409940)
chr3 (11-159)||(32479698-32479846)
chr3 (45-152)||(25634589-25634696)
chr3 (11-264)||(28101413-28101666)
chr3 (11-159)||(42991004-42991152)
chr3 (39-159)||(43422903-43423021)
chr3 (11-159)||(8516452-8516600)
chr3 (11-143)||(30844905-30845037)
[»] chr7 (36 HSPs)
chr7 (12-264)||(36080-36332)
chr7 (12-264)||(38394616-38394868)
chr7 (12-264)||(13289905-13290157)
chr7 (12-159)||(7093867-7094014)
chr7 (11-252)||(47675499-47675740)
chr7 (12-253)||(7351057-7351298)
chr7 (12-264)||(1048695-1048947)
chr7 (12-241)||(44725228-44725457)
chr7 (12-264)||(22135433-22135685)
chr7 (12-264)||(40550460-40550712)
chr7 (11-241)||(6570563-6570793)
chr7 (11-188)||(48490034-48490211)
chr7 (12-154)||(26213460-26213601)
chr7 (56-253)||(6593940-6594137)
chr7 (56-253)||(18391578-18391775)
chr7 (11-242)||(7471386-7471617)
chr7 (11-253)||(24749228-24749470)
chr7 (12-131)||(31159108-31159227)
chr7 (12-126)||(24816776-24816890)
chr7 (11-164)||(20298045-20298198)
chr7 (48-147)||(6047231-6047330)
chr7 (11-159)||(16884285-16884433)
chr7 (11-159)||(28486300-28486448)
chr7 (66-253)||(4295401-4295588)
chr7 (11-153)||(3890796-3890938)
chr7 (11-159)||(24261904-24262052)
chr7 (11-242)||(21678711-21678942)
chr7 (89-154)||(3903913-3903978)
chr7 (314-378)||(8232995-8233059)
chr7 (60-159)||(12405744-12405843)
chr7 (60-159)||(5817766-5817865)
chr7 (60-159)||(18413065-18413164)
chr7 (60-159)||(21645432-21645531)
chr7 (60-159)||(49091084-49091183)
chr7 (60-145)||(21988327-21988412)
chr7 (106-155)||(9447100-9447149)
[»] chr1 (30 HSPs)
chr1 (15-264)||(20300752-20301001)
chr1 (12-257)||(28203105-28203350)
chr1 (12-253)||(51750669-51750910)
chr1 (12-159)||(28841148-28841295)
chr1 (11-258)||(31657763-31658010)
chr1 (12-159)||(27338539-27338686)
chr1 (12-264)||(16226789-16227041)
chr1 (12-264)||(51758155-51758407)
chr1 (11-258)||(50168712-50168958)
chr1 (56-253)||(3157227-3157424)
chr1 (12-157)||(8348471-8348616)
chr1 (12-253)||(47177994-47178235)
chr1 (11-253)||(31736881-31737123)
chr1 (11-159)||(6996310-6996458)
chr1 (11-159)||(28222783-28222931)
chr1 (12-159)||(3805544-3805691)
chr1 (11-242)||(50078199-50078430)
chr1 (11-133)||(16429700-16429822)
chr1 (11-253)||(25250686-25250928)
chr1 (56-147)||(16456388-16456479)
chr1 (12-264)||(13127141-13127393)
chr1 (11-253)||(28997660-28997902)
chr1 (11-253)||(29003376-29003618)
chr1 (11-119)||(31424439-31424547)
chr1 (11-166)||(33094233-33094388)
chr1 (60-159)||(41397646-41397745)
chr1 (60-159)||(47099399-47099498)
chr1 (63-159)||(19359419-19359515)
chr1 (65-139)||(4681757-4681831)
chr1 (132-216)||(13784790-13784874)
[»] chr2 (15 HSPs)
chr2 (12-159)||(21520100-21520247)
chr2 (12-264)||(36560547-36560799)
chr2 (12-253)||(22405336-22405577)
chr2 (12-242)||(35217376-35217606)
chr2 (12-264)||(19503742-19503994)
chr2 (22-264)||(6263570-6263812)
chr2 (15-147)||(28569834-28569966)
chr2 (12-242)||(42019252-42019471)
chr2 (11-159)||(19348635-19348783)
chr2 (60-159)||(34574612-34574711)
chr2 (60-159)||(23079048-23079147)
chr2 (60-159)||(25403057-25403156)
chr2 (60-157)||(10446023-10446120)
chr2 (228-264)||(28570034-28570070)
chr2 (89-143)||(7859308-7859362)
[»] scaffold1899 (1 HSPs)
scaffold1899 (12-264)||(245-497)
[»] scaffold0133 (1 HSPs)
scaffold0133 (12-242)||(26297-26526)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-252)||(115168-115409)
[»] scaffold0140 (1 HSPs)
scaffold0140 (12-264)||(22747-22999)
[»] scaffold0011 (1 HSPs)
scaffold0011 (12-159)||(34276-34423)
[»] scaffold0025 (1 HSPs)
scaffold0025 (12-241)||(72923-73152)
[»] scaffold0219 (1 HSPs)
scaffold0219 (55-264)||(26822-27031)
[»] scaffold0004 (1 HSPs)
scaffold0004 (11-242)||(80509-80740)
[»] scaffold0355 (1 HSPs)
scaffold0355 (11-159)||(458-606)
[»] scaffold0005 (1 HSPs)
scaffold0005 (11-159)||(50744-50892)
[»] scaffold0197 (1 HSPs)
scaffold0197 (11-159)||(14890-15038)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-159)||(149536-149684)
[»] scaffold1674 (1 HSPs)
scaffold1674 (11-159)||(857-1005)
[»] scaffold1991 (1 HSPs)
scaffold1991 (60-139)||(1022-1101)
[»] scaffold0188 (1 HSPs)
scaffold0188 (106-159)||(18525-18578)
[»] scaffold0006 (1 HSPs)
scaffold0006 (60-157)||(1914-2011)
[»] scaffold0842 (1 HSPs)
scaffold0842 (65-159)||(3773-3867)


Alignment Details
Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 13694504 - 13694755
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||||||| | ||||||||| | |||||||||||||||||||||||||| |||||||| | ||||||||| |||||||    
T  13694504 tcatcaaggattttgttgaactccgttagttgctccatgatgacatttgactccaccatcttaaataagtagagttgttgatataggaattgcatatgag 13694603  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||| |||||||||||||| |||||||| |||| ||||||| ||  | |  || ||||||| | || || |||| ||||||||| |  |||||||||    
T  13694604 ccaaagatttggtcatatacaacgactccaaatttgaccacatcaatatcgcggtaggttccttcgtgatat-cctcaaaactttatccccgaggcacaa 13694702  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    || || ||||||||||| |||||| |||||| ||||||||| ||||| |||||    
T  13694703 gaaaatagcactcattgccttgtctaccatctcagtcttctatgcttgtgaca 13694755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 26171573 - 26171331
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  26171573 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 26171474  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| || |||||||||| ||| ||||||| |||  |  ||||||| | |||||||||  ||||||| | || ||||||||    
T  26171473 gccaaagacttggtcatatacaacgattccaactttgaccatatcgatgccacggttggttccttcgcgacatcccttaaaactttgtcctcgaggcaca 26171374  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  26171373 agacaatggcactcctagccttgtccaccatctcggtcttctc 26171331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 29721181 - 29720939
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  29721181 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 29721082  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| || |||||||||| ||||||||||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||    
T  29721081 gccaaagacttggtcatatacaacgattccaactttgaccacatcgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcaca 29720982  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  29720981 agacaatggcactcctagccttgtccaccatctcggtcttctc 29720939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 534565 - 534312
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| ||||||||||||| ||||| | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  ||| |    
T  534565 atcatcaagtattttgttgaactccgttaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatca 534466  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
     |||||||||||||||||||||||||||||||||||| ||||||| | | | |  || ||||||| | |||||||||| ||||||| |    ||||||||    
T  534465 accaaagacttggtcatatacaatgactccaactttgaccacatcaacgccgccgtaggttccttcgggacatccctcaaaactttgtcaccgaggcaca 534366  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  534365 agacaatggcactcctagccttgtccaccatctcggtcttctccgcttctgaca 534312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 34478825 - 34479066
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  34478825 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgtcgatgag 34478924  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  34478925 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 34479024  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  34479025 gacaacggcactcctggccttgtccaccatctcggtcttctc 34479066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 6745941 - 6745700
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  6745941 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 6745842  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || | |||||||| |||||| |||| | |  |  |||||||||  || || ||| ||||||||| |  |||||||||    
T  6745841 ccaaagactttgtcatatacaaagattacaactttgcccacattgatgccgcggttcgttcctttgctacttctctcaaaactttatccccgaggcacaa 6745742  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | |||||| |||||| | ||||||||    
T  6745741 gacaatggcactcctggccttgtctaccatctcggtcttctc 6745700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 10750571 - 10750330
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  10750571 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 10750472  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   |||||||   || || ||| ||||||||| |  |||||||||    
T  10750471 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttcctacttctctcaaaactttatccccgaggcacaa 10750372  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||| ||||||| | | ||||||||||||| | ||||||||    
T  10750371 gacaacagcactcctggccttgtccaccatctcggtcttctc 10750330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 31543606 - 31543354
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||||| ||| |||| ||| |||| |||||||||||   |||||    
T  31543606 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcttgaatgagtagagtcgttgctttaggaattgccgatgag 31543507  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || || ||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  31543506 ccaaagactttgtcatatacaaagattctaactttgcccacatcgatgtcgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 31543407  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| ||||||||||    
T  31543406 gacaacggcactcctggccttgtccaccatctcggtcttctccgcttatgaca 31543354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 9788583 - 9788825
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  9788583 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 9788682  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| || |||||||||| ||| ||||||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||    
T  9788683 gccaaagacttggtcatatacaacgattccaactttgaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcaca 9788782  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | |||||||| |||| | ||||||||    
T  9788783 agacaatggcactcctagccttgtccatcatctcggtcttctc 9788825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 15356255 - 15356507
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  15356255 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 15356354  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  15356355 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 15356454  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  ||||||   | ||||||||||||| | |||||||| |||| |||||    
T  15356455 gacaacggcactccgggccttgtccaccatctcggtcttctccgcttgtgaca 15356507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 23665919 - 23665667
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  23665919 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 23665820  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  23665819 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 23665720  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  ||||||   | ||||||||||||| | |||||||| |||| |||||    
T  23665719 gacaacggcactccgggccttgtccaccatctcggtcttctccgcttgtgaca 23665667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 18467557 - 18467316
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| | | | |||||||||| |||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  18467557 tcatcaaggattttgttgaactccgtaaattgctccatgatggtctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 18467458  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |  |||||||||  || || ||| |||||||||    ||| |||||    
T  18467457 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctacttctctcaaaactttatctccgagacacaa 18467358  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  18467357 gacaatggcactcctggccttgtccaccatctcggtcttctc 18467316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 42427793 - 42427937
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  |||| | ||||| | | || |||||||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  42427793 atcatcaaggattttgttgaactctgttaattgttccgtcacggtctttgactccaccatcttgaatgaatagagttgttgcttaaggaattgcctatga 42427892  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  42427893 gccaaagacttggtcatatacaatgactacaactttgaccacatc 42427937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 39 - 253
Target Start/End: Complemental strand, 658864 - 658650
Alignment:
Q  39 agtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgact 138  Q
    ||||| |||||||||||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||||||||||||| |||||||||||  | |    
T  658864 agtaggtccatgatggcctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatatt 658765  T
Q  139 ccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccac 238  Q
    | ||||||| ||||||||||| | |  |  |||||||||  || || ||| ||||||||| |  ||||||||||||||  |||||| |   |||||||||    
T  658764 cgaactttgaccacatcgatgtcgcggttggttcctttgctacttctctcaaaactttatccccgaggcacaagacaatggcactcctgaccttgtccac 658665  T
Q  239 catcacagtcttctc 253  Q
    |||| | ||||||||    
T  658664 catctcggtcttctc 658650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 27911306 - 27911060
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||    ||||    
T  27911306 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccgatga 27911207  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| ||||||||||| | || |   ||||||||  || || ||| |||||||||    ||||||||    
T  27911206 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgattcctttgctacttctctcaaaactttatctccgaggcaca 27911107  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgct 257  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||||||    
T  27911106 agacaatggcactcctggccttgtccaccatctcggtcttctctgct 27911060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 40380877 - 40380680
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  40380877 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 40380778  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  || ||| | | ||||||||||||| | ||||||||    
T  40380777 gatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttctc 40380680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 147
Target Start/End: Complemental strand, 16408141 - 16408005
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||| ||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  16408141 atcatcaaggattttgttgaactccgccaattgctccatcacggtcttttactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 16408042  T
Q  111 gccaaagacttggtcatatacaatgactccaactttg 147  Q
    ||||||||||||||||||||||| || ||||||||||    
T  16408041 gccaaagacttggtcatatacaacgattccaactttg 16408005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 20043857 - 20043606
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||| | ||||||| |   ||| | ||||||||||||||||||||  ||||||| ||| ||||||||||||| |||||||||||   |||||    
T  20043857 tcatcaaggattgttttgaactccacaagttgctccatgatggcctttgactctgccatcttgaatgagtaaagttgttgctttaggaattgccgatgag 20043758  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| |||||||||||  | || ||||||| | |||||||| ||  | |  ||||||| |  ||||| ||| || |||||| |  |||||||||    
T  20043757 ccaaagactttgtcatatacaaatattcgaactttgactacatcgat-gctgagttggttccttcgctacatctctcaaatctttatccccgaggcacaa 20043659  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
     ||||  |||||| | | ||||||||||||| | ||||||||||||| |||||    
T  20043658 aacaatggcactcttggccttgtccaccatctcggtcttctctgcttgtgaca 20043606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 33790673 - 33790821
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| |||| |||||||| || | || |||  |||||    
T  33790673 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgagtagagttgttgcttcaagagttgtctatga 33790772  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  33790773 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 33790821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 16545201 - 16545001
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagac---ttggtcatatacaatgactccaactttggccac 152  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| |||   |||||||||||||| || |||||||| | |||     
T  16545201 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttgttggtcatatacaacgattccaacttagaccat 16545102  T
Q  153 atcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttct 252  Q
    ||||||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  || ||| | | ||||||||||||| | |||||||    
T  16545101 atcgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttct 16545002  T
Q  253 c 253  Q
    |    
T  16545001 c 16545001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 25806335 - 25806187
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||    ||||    
T  25806335 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccaatga 25806236  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| || ||||||||  | || ||||||| |||||||||||    
T  25806235 gccaaagactttgtaatatacaaatattcgaactttgaccacatcgatg 25806187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 18510819 - 18510941
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   || |    
T  18510819 atcaccaatgattttgttgaactgcacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgccgataa 18510918  T
Q  111 gccaaagacttggtcatatacaa 133  Q
    ||||||||||| |||||||||||    
T  18510919 gccaaagactttgtcatatacaa 18510941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 37557353 - 37557205
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| | || |||||||| || | || |||  |||||    
T  37557353 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatga 37557254  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||| | |||||||||||    
T  37557253 gccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 37557205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 31397721 - 31397573
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||||||| | || |||||||| || | || |||  |||||    
T  31397721 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttaaatgaatagagttgttgcttcaagagttgcctatga 31397622  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || |||||||| |||||||||||||||  |||||| ||||    
T  31397621 gccaaagattttgtcatatagaatgactccaacttttcccacattgatg 31397573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 27449229 - 27449328
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||  ||||||| ||||| || ||||||||||||||||||||||| | |||||||||||    
T  27449229 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatgagctaaagattttgtcatatacaatgactccaacttcgcccacatcgatg 27449328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 43598139 - 43598238
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||   |||||| ||||| || ||||||||||||||||||||||| | |||||||||||    
T  43598139 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcccatgagctaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 43598238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 43603631 - 43603730
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||   |||||| ||||| || ||||||||||||||||||||||| | |||||||||||    
T  43603631 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcccatgagctaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 43603730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 43609123 - 43609222
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||   |||||| ||||| || ||||||||||||||||||||||| | |||||||||||    
T  43609123 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcccatgagctaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 43609222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 2239871 - 2239948
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaa 133  Q
    ||||||||||| |||| |||||||  | |||||||||||||||| ||| |||||||||||  | ||| ||||||||||    
T  2239871 ctttgactccagcatcctaaataaacagagttgttgttttaggagttgtatatgagccaattatttgttcatatacaa 2239948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 34842023 - 34842127
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| |||| ||||||| ||| |  |||||  || |||| ||||| || ||||| ||||||| ||||||||| | |||||||||||    
T  34842023 gactccaccatcttgaatgagtagagttgttatttcaaaaattgtctacgagctaaagattttgtcatgtacaatggctccaacttagcccacatcgatg 34842122  T
Q  160 gcaca 164  Q
     ||||    
T  34842123 tcaca 34842127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 9e-46; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 34255868 - 34256121
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  34255868 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 34255967  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||   |  |  ||||||| | |||||||||| ||||||| | |  ||||||||    
T  34255968 gccaaagacttggtcatatacaacgactccaactttgaccacatcgatgttgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcaca 34256067  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||||| | ||||||||||||| | |||||||| |||| |||||    
T  34256068 agacaatggcactcatagccttgtccaccatctcggtcttctccgcttgtgaca 34256121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 196
Target Start/End: Complemental strand, 4732464 - 4732279
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||||| | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  4732464 atcatcaaggattttgttgaactccgttaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 4732365  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaacttt 196  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| | |||  || ||||||| | |||||||||| |||||||    
T  4732364 gccaaagacttggtcatatacaatgtctccaactttgaccacatcgacgccacggtaggttccttcgcgacatccctcaaaacttt 4732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 15069495 - 15069254
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  15069495 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 15069396  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | || |  |||| ||||  || ||  || ||||||||| |  |||| ||||    
T  15069395 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcagttggttcatttgctacttctttcaaaactttatccccgaggaacaa 15069296  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  15069295 gacaatggcactcctggccttgtccaccatctcggtcttctc 15069254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 27827913 - 27827672
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  27827913 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagtcgttgctttaggaattgccgatgag 27827814  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  27827813 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 27827714  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  27827713 gacaatggcactcctagccttgtccaccatctcggtcttctc 27827672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 18811636 - 18811384
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  18811636 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 18811537  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||| ||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  18811536 ccaaagactttgtcatatacaaagattccatctttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 18811437  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||   |||||   | ||||||||||||| | |||||||| |||| |||||    
T  18811436 gacaatgacactccaggccttgtccaccatctcggtcttctccgcttgtgaca 18811384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 43080530 - 43080278
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||| | ||| |||| ||| ||||||||||||||||   |||||    
T  43080530 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcctgaatgagtagagtcgttgttttaggaattgccgatgag 43080431  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| |||||||||    |||||||||    
T  43080430 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatctccgaggcacaa 43080331  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  43080330 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 43080278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 31577700 - 31577903
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||| ||||||||||||||| ||| ||| | |||||||||||| |||||||||||||||| |||| ||| |||||||| |||||||||||   | |||    
T  31577700 tcatcatggattttgttgaactccgtaagttgctccatgatggccattgactccaccatcttgaata-gtagagttgttgctttaggaattgccgaagag 31577798  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||  ||||||||||||| ||||||||||| | || |  ||||||| |  || || ||| ||||||||| |  |||||||||    
T  31577799 ccaaagactttgtcatatacacagactccaactttgaccacatcgatgacgcaattggttccttcgctacctctctcaaaactttatccccgaggcacaa 31577898  T
Q  212 gacaa 216  Q
    |||||    
T  31577899 gacaa 31577903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 5591691 - 5591445
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| ||||||||||||| ||| | | | ||  | | || |||| ||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  5591691 atcatcaagaattttgttgaactccgtcaattgctctgtcacggtctttaactccaccatcttgaatgaatagagttgttgcttaaggaattgcctatga 5591592  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| | | |  |  ||||||| | |||||||||| |||||||||    ||||||||    
T  5591591 gccaaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcgcgacatccctcaaaactttatcaccgaggcaca 5591492  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
    ||||||  |||||| | | | ||||||||||| | |||||||| ||||    
T  5591491 agacaatggcactcctag-cctgtccaccatctcggtcttctccgctt 5591445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 17848454 - 17848308
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||| | ||||||||||| |||   |||||||||  ||||||||||| |||||| ||| |||| |||||||| ||||||||||    |||||    
T  17848454 tcatcaaggattgtattgaacttcgtaagttactccatgatgaactttgactccaacatcttcaatgagtagagttgttgctttaggaatttccgatgag 17848355  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgat 158  Q
    |||||||  | ||||||||||| ||||||||||||| ||||||||||    
T  17848354 ccaaagagattgtcatatacaaagactccaactttgaccacatcgat 17848308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 35744748 - 35744896
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| |||| |||||||| || | || |||  |||||    
T  35744748 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgagtagagttgttgcttcaagagttgtctatga 35744847  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  35744848 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 35744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 10684993 - 10684845
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| | || |||||||| || | || |||  |||||    
T  10684993 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatga 10684894  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  10684893 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 10684845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 41383582 - 41383434
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  ||||||| |||| ||||||||||||| ||||||| |||   ||||    
T  41383582 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatctcaaatgagtaaagttgttgctttaggacttgccgatga 41383483  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    | ||||||||| |||||||||||  | |  ||||||| |||||||||||    
T  41383482 gtcaaagactttgtcatatacaaatatttgaactttgaccacatcgatg 41383434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 21481424 - 21481277
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||| ||||||||| ||  ||    |||||||||| ||||||||| |||||||| ||| |||||| |||||  |||||||||||   |||||    
T  21481424 tcatcaaggattctgttgaactccgcaaggttctccatgatggtctttgactctaccatcttgaatgagtaaaattgtttctttaggaattggcgatgag 21481325  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| |||||||||||  | || ||||||| |||||| ||||    
T  21481324 ccaaagactttgtcatatacaaatattcgaactttgaccacattgatg 21481277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 18853843 - 18853744
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  ||||||||||||| || |||||||||||||||||||| || | |||||||||||    
T  18853843 gactccaccatcttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaatttagcccacatcgatg 18853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 6813100 - 6813199
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| |||| ||||||||||| | || ||   |||||||||| || || ||||| ||||||||||||||||| | |||||| ||||    
T  6813100 gactccaccatcttcaatgagtagagttgttgtttcaagagtttcctatgagccaacgatttcgtcatgtacaatgactccaacttagcccacattgatg 6813199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 7099960 - 7100000
Alignment:
Q  57 tttgactccaccatcttaaataagtaaagttgttgttttag 97  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  7099960 tttgactctaccatcttaaatgagtaaagttgttgttttag 7100000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 26300748 - 26300840
Alignment:
Q  63 tccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    ||||||| ||| ||| | || ||||||||||| | || |||  ||||||||||||| || ||||| ||||||||||||||||| | |||||||    
T  26300748 tccaccaccttgaatgaatagagttgttgtttcaagagttgtctatgagccaaagattttgtcatgtacaatgactccaacttagcccacatc 26300840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 10380558 - 10380598
Alignment:
Q  106 tatgagccaaagacttggtcatatacaatgactccaacttt 146  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  10380558 tatgagccaacaacttgatcatatacaatgactccaacttt 10380598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 32429287 - 32429367
Alignment:
Q  62 ctccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaa 142  Q
    |||||||||| ||||| |||| ||||||||||| | ||||||  ||| || ||| ||||||  |||||||||| |||||||    
T  32429287 ctccaccatcctaaatgagtagagttgttgtttcaagaattgtctataagtcaatgacttgaacatatacaataactccaa 32429367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 9e-46; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 5408431 - 5408684
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  5408431 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 5408530  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||| | |  | |||||||| | |||||||||| ||||||| | |  ||||||||    
T  5408531 gccaaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggttagttccttcgcgacatccctcaaaactttgtccccgaggcaca 5408630  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  5408631 agacaatggcactcctagccttgtccaccatctcggtcttctccgcttgtgaca 5408684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 5412756 - 5413009
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  5412756 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 5412855  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||||||| | |  | |||||||| | |||||||||| ||||||| | |  ||||||||    
T  5412856 gccaaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggttagttccttcgcgacatccctcaaaactttgtccccgaggcaca 5412955  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  5412956 agacaatggcactcctagccttgtccaccatctcggtcttctccgcttgtgaca 5413009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 12936655 - 12936804
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||| |||| ||| ||| | ||||||||||||||| ||||||||||||||||| |||| |||||||| |||||||||||   |||||    
T  12936655 tcatcaaggattttgttaaactccgtaagttgctccatgatggcctttaactccaccatcttaaatgagtagagttgttgctttaggaattgccaatgag 12936754  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggc 161  Q
    ||||||| || ||||||||||| ||||||||||||| |||||||||||||    
T  12936755 ccaaagattttgtcatatacaaagactccaactttgaccacatcgatggc 12936804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 242
Target Start/End: Complemental strand, 17012935 - 17012706
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||| ||||||| ||  |||   |||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||||   |||||    
T  17012935 tcatcaaggatttt-ttgaactccgcaagtttctccatgatggcctttgactctaccatcttgaatgagtaaagttgttgcttttggaattgccgatgag 17012837  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||||||  ||||||||||  | || ||||||| ||||||||||| | || |  |||||||||  || |||||| |||||| ||||| |||||||||    
T  17012836 ccaaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgctacttccctcaaaacttaattctcgaggcacaa 17012737  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||| |||| |||| | |||||||||||||    
T  17012736 gacaatagcaatcatggccttgtccaccatc 17012706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 12158125 - 12157872
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||| ||||||||||  || |||   |||||| ||| |||||||||||||||||| ||| |||| |||  ||| |||||||||||   ||||    
T  12158125 atcatcaaggatcttgttgaactctgtaagtttctccatggtggtctttgactccaccatcttgaatgagtagagtgcttgctttaggaattgccaatga 12158026  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| | | ||  ||||||| | |||||||| | ||||||| | |  |||||| |    
T  12158025 gccaaagactttgtcatatacaatgactccaactttgaccacatcgatgtcgcgtttggttccttagcgacatcccccaaaactttttccccgaggcata 12157926  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||   ||||| | | ||||||||||||| | |||||||| |||| |||||    
T  12157925 agacaatgtcactcctagccttgtccaccatctcggtcttctccgcttgtgaca 12157872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 33309762 - 33309615
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  33309762 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 33309663  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| ||| |||||||    
T  33309662 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatg 33309615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 25462871 - 25463101
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||| |||||||||||||| ||| ||| | ||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||   |||||    
T  25462871 tcatcaaagattttgttgaactccgtaagttgctccatgatggcctttgactccaccatcttgaatgagtagagttgttgctttaggaattgccgatgag 25462970  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    || ||||||| ||||||||||| ||||  ||||||  | ||||||||| | | ||  |||| || |  ||||| ||| ||||||||| |  |||||||||    
T  25462971 cctaagactttgtcatatacaaagactataactttaactacatcgatgccgcgtttggttctttcgctacatctctcaaaactttatccccgaggcacaa 25463070  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    |||||  |||||| | | |||||| ||||||    
T  25463071 gacaatggcactcttggccttgtctaccatc 25463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 30444161 - 30444019
Alignment:
Q  17 aaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaa 116  Q
    ||||||||||||||||||||| ||| | ||||||||||  | | | |||| |||||||||| |||| |||||| | ||||| |||||  |||||||||||    
T  30444161 aaggattttgttgaacttcgtaagttgctccatgatggtgtataaatccatcatcttaaatgagtagagttgtggctttagaaattgtctatgagccaaa 30444062  T
Q  117 gacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  30444061 gacttggtcatatacaacgactccaactttgaccacatcgatg 30444019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 26931969 - 26932210
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||||| ||| |||| ||| |||| |||||||||||   |||||    
T  26931969 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcttgaatgagtagagtcgttgctttaggaattgccgatgag 26932068  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || | |||||||| ||||| ||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  26932069 ccaaagactttgtcatatacaaagatttcaactttgcccacaacgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 26932168  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  26932169 gacaacggcactcctggccttgtccaccatctcggtcttctc 26932210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 3395242 - 3395122
Alignment:
Q  39 agtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgact 138  Q
    ||||| ||| |||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||   ||||||||||||||| ||||||||||| || |    
T  3395242 agtagctccgtgatggcctttgactctaccatcttgaatgagtaaagttgttgctttaggaattgccaatgagccaaagactttgtcatatacaaagatt 3395143  T
Q  139 ccaactttggccacatcgatg 159  Q
    |||||||||  ||||||||||    
T  3395142 ccaactttgcacacatcgatg 3395122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 16553481 - 16553240
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||| |||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  ||||||    
T  16553481 tcatcaaggatcttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgtctatgag 16553382  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||| ||||||||||||||||| || |||||||| | ||| ||||||| | |  |  ||||||| | |||||||||| ||||||| | |  |||||||||    
T  16553381 ccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaa 16553282  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  || ||| | | ||||||||| ||| | ||||||||    
T  16553281 gacaatggcgctcctcgccttgtccacgatctcggtcttctc 16553240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 16630037 - 16629796
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||| |||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  ||||||    
T  16630037 tcatcaaggatcttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgtctatgag 16629938  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||| ||||||||||||||||| || |||||||| | ||| ||||||| | |  |  ||||||| | |||||||||| ||||||| | |  |||||||||    
T  16629937 ccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaa 16629838  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  || ||| | | ||||||||| ||| | ||||||||    
T  16629837 gacaatggcgctcctcgccttgtccacgatctcggtcttctc 16629796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 34165645 - 34165448
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  34165645 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 34165546  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  || ||| | | ||||||||||||| | ||||||||    
T  34165545 gatgccgcagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccaccatctcggtcttctc 34165448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 3631376 - 3631496
Alignment:
Q  39 agtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgact 138  Q
    ||||| |||||||||||||||||||  |||||||| ||| ||||||||| ||| |||||||||||   ||||| ||||||||| ||||||||||| |  |    
T  3631376 agtagctccatgatggcctttgactttaccatcttgaatgagtaaagttattgctttaggaattgttgatgagtcaaagactttgtcatatacaaagctt 3631475  T
Q  139 ccaactttggccacatcgatg 159  Q
    |||||||||||||||||||||    
T  3631476 ccaactttggccacatcgatg 3631496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 26067801 - 26067948
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||| ||||||| ||| ||| | || |||||||||||||||||  ||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  26067801 tcatctaggatttttttgaactccgtaagttgctcaatgatggcctttgactcttccatcctgaatgagtagagtcgttgctttaggaattgctgatgag 26067900  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  26067901 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatg 26067948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 196
Target Start/End: Complemental strand, 16651741 - 16651557
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||| |||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  ||||||    
T  16651741 tcatcaaggatcttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgtctatgag 16651642  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaacttt 196  Q
    |||| ||||||||||||||||| || |||||||| | ||| ||||||| | |  |  ||||||| | |||||||||| |||||||    
T  16651641 ccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaacttt 16651557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 12910979 - 12911093
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||| |||| ||| ||| | ||||||||||||||| ||||||||||||| ||| |||| |||||||| ||||||||||    |||||    
T  12910979 tcatcaaggattttgttaaactccgtaagttgctccatgatggcctttaactccaccatcttgaatgagtagagttgttgctttaggaattcccaatgag 12911078  T
Q  112 ccaaagacttggtca 126  Q
    |||||||||| ||||    
T  12911079 ccaaagactttgtca 12911093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 15534035 - 15534155
Alignment:
Q  39 agtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgact 138  Q
    ||||| ||||||||||  |||||||| |||||||| ||| ||||||||||||| ||||||| |||   ||||||||||||||| |||||||||||  | |    
T  15534035 agtagctccatgatggtttttgactctaccatcttgaatgagtaaagttgttgctttaggacttgccaatgagccaaagactttgtcatatacaaatatt 15534134  T
Q  139 ccaactttggccacatcgatg 159  Q
    | ||||||| |||||||||||    
T  15534135 cgaactttgaccacatcgatg 15534155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 48 - 161
Target Start/End: Complemental strand, 26944361 - 26944248
Alignment:
Q  48 atgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttg 147  Q
    ||||||||||||||||| |||||||| ||| | ||||||||| | |||||||||||   || |||||||||||| |||||||||||  | || |||||||    
T  26944361 atgatggcctttgactctaccatcttgaattattaaagttgtcgctttaggaattgtcgataagccaaagactttgtcatatacaaatattcgaactttg 26944262  T
Q  148 gccacatcgatggc 161  Q
     |||||||||||||    
T  26944261 accacatcgatggc 26944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 33331126 - 33331027
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||  ||||||||||||| ||  |||||||||||||||||||||||| |||||||||||    
T  33331126 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatgagccaaagatttcatcatatacaatgactccaactttgcccacatcgatg 33331027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 14738252 - 14738153
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||| |||||| ||| | || |||||||| || | || |||  ||||||||||||| || ||||||||||||||||||||||| | | |||||||||    
T  14738252 gactccatcatcttgaatgaatagagttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgccaacatcgatg 14738153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 11137286 - 11137214
Alignment:
Q  170 ttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||||  ||||| ||| ||||||||| | |||||||||||||||  |||||| | | |||||||||||||    
T  11137286 ttcctttgctacatctctcaaaactttatccctgaggcacaagacaatggcactcctagccttgtccaccatc 11137214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 10113786 - 10113581
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  |||||| | |||||||||||||||||||||||| |||| ||| |||| |||||||| |||||||||||  | |||    
T  10113786 atcatcaaggattttgttgaactctgttagtcgctccatgatggcctttgactccaccgtcttgaatgagtagagttgttgatttaggaattgcctgtga 10113687  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||    |   | ||||||| | |||||| ||  ||||||||||| |||||||||    
T  10113686 gccaaagacttagtcatatacaatgactccaactttgaccacatcgatattgcggaaggttccttcgtgacatctctgaaaactttattcctgaggcaca 10113587  T
Q  211 agacaa 216  Q
    ||||||    
T  10113586 agacaa 10113581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 52094724 - 52094977
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||| | | | ||||| | || |||||| ||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  52094724 atcatcaaggattttgttgaactccgtcaattgctccatcacggtctttgaatccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 52094823  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | |  || ||||||| | || ||||||| ||||||| |    || |||||    
T  52094824 gccaaagacttggtcatatacaatgactccaactttgaccacatcgatgccgcggtaggttccttcgtgaaatccctcaaaactttgtcaccgaagcaca 52094923  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||   ||||||| | ||||||||||||| | |||||||| |||| |||||    
T  52094924 agacaatgacactcatagccttgtccaccatctcggtcttctccgcttgtgaca 52094977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 5872621 - 5872374
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| | ||| | | ||||| |||| |||||||||||||||||| ||| |||| | |||||| || ||||||||  |||||    
T  5872621 atcatcaaggattttgttgaactccattaattgctccatcatggtctttgactccaccatcttgaatgagtagatttgttgcttaaggaattgcctatga 5872522  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||||||| ||| |  |  ||||||| | ||| |||||| ||||||| |    ||||||||    
T  5872521 gccaaagacttggtcatatgcaacgactccaactttgaccacatcgacggcgcggttggttccttcgcgacctccctcaaaactttgtcaccgaggcaca 5872422  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
    ||||||  |||||||| | ||||||||||||| | |||||||| ||||    
T  5872421 agacaatggcactcatagccttgtccaccatctcggtcttctccgctt 5872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 16933554 - 16933806
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||| | ||| |||| ||| ||||||||||||||||   |||||    
T  16933554 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcctgaatgagtagagtcgttgttttaggaattgccgatgag 16933653  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  16933654 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 16933753  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  16933754 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 16933806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 22134023 - 22134275
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  22134023 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 22134122  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| |||||||| || || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  22134123 ccaaagactttgtcatataaaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 22134222  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | || ||||| |||| |||||    
T  22134223 gacaatggcactcctggccttgtccaccatctcggttttctccgcttgtgaca 22134275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 22782143 - 22782373
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  22782143 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgtcgatgag 22782242  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  22782243 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 22782342  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    |||||  |||||| | | |||||||||||||    
T  22782343 gacaacggcactcctggccttgtccaccatc 22782373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 12402502 - 12402649
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||| ||||||||||||||| ||| ||| | |||||||||||||| |||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  12402502 tcatcacggattttgttgaactccgtaagttgctccatgatggccttcgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 12402601  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  12402602 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatg 12402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 11007974 - 11008226
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| | | |||| |||||||||||   |||||    
T  11007974 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagattcgttgctttaggaattgccgatgag 11008073  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||| ||||  ||||||||||| | |  |   ||||||||  || || ||| |||||||||    |||||||||    
T  11008074 ccaaagactttgtcatatacaaagattccatcttttcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatctccgaggcacaa 11008173  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| |||||||||| |||| |||||    
T  11008174 gacaacggcactcctggccttgtccaccatctcagtcttctccgcttgtgaca 11008226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 22046121 - 22046373
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  22046121 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagtcgttgctttaggaattgccgatgag 22046220  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || ||||| |||| ||||||||||| |    |   || |||||  || || ||| ||||||||| || |||||||||    
T  22046221 ccaaagactttgtcatatacaaagattccaaatttgcccacatcgatgccgaggttgcttactttgctacttctctcaaaactttatcctcgaggcacaa 22046320  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||| | | | ||||||||||||| | |||||||| |||| |||||    
T  22046321 gacaatggcacacctggccttgtccaccatctcggtcttctccgcttgtgaca 22046373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 12743290 - 12743436
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||| |||||||||||||| ||||| | | ||||| | || |||||||||||||||||| ||| |||| |||||||  || ||||||||  ||| |    
T  12743290 atcatcaaagattttgttgaactccgttaattgctccatcacggtctttgactccaccatcttgaatgagtatagttgtttcttaaggaattgcctataa 12743389  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcga 157  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||    
T  12743390 gccaaagacttggtcatatacaatgatttcaactttgaccacatcga 12743436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 5136853 - 5136656
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  5136853 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 5136754  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  |||||| | | ||||||||||||| | ||||||||    
T  5136753 gatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcactcctcgccttgtccaccatctcggtcttctc 5136656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 7123469 - 7123272
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  7123469 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 7123370  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | | ||  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  || ||| | | ||||||||||||| | ||||||||    
T  7123369 gatgccgcgtttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttctc 7123272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 15 - 216
Target Start/End: Complemental strand, 26558511 - 26558310
Alignment:
Q  15 tcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagcca 114  Q
    ||||||| |||||||||||  || ||| | ||  ||||||||||||||||||||||||| ||| |||| ||||| || ||| | ||||| |||| |||||    
T  26558511 tcaaggaatttgttgaactatgtgagttgctcagtgatggcctttgactccaccatcttgaatgagtagagttgatgctttcgaaattgcatataagcca 26558412  T
Q  115 aagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagac 214  Q
    | ||  ||||||||||||| ||||||||||||| ||| ||| ||| | |  |  ||||||||| |||||||||  ||||||||| || ||||||||||||    
T  26558411 aggatatggtcatatacaacgactccaactttgaccatatccatgccgcggttggttcctttgcgacatcccttaaaactttatcctcgaggcacaagac 26558312  T
Q  215 aa 216  Q
    ||    
T  26558311 aa 26558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 12395266 - 12395517
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||| ||||||||||||||| ||| ||| | |||||||||||||| || ||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  12395266 tcatcacggattttgttgaactccgtaagttgctccatgatggccttcgattccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 12395365  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||||||  ||| |||||| || |||||||||| ||||||||||| |||  |  | |||||||  || || ||| ||| ||||| |  |||||||||    
T  12395366 ccaaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctacttctctcaaaattttatccccgaggcacaa 12395464  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||  | | ||||||||||| | | |||||||| ||| ||||||    
T  12395465 gacaatggcacttctggccttgtccaccagctcggtcttctccgctcatgaca 12395517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 12400228 - 12400479
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||| ||||||||||||||| ||| ||| | |||||||||||||| || ||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  12400228 tcatcacggattttgttgaactccgtaagttgctccatgatggccttcgattccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 12400327  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||||||  ||| |||||| || |||||||||| ||||||||||| |||  |  | |||||||  || || ||| ||| ||||| |  |||||||||    
T  12400328 ccaaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctacttctctcaaaattttatccccgaggcacaa 12400426  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||  | | ||||||||||| | | |||||||| ||| ||||||    
T  12400427 gacaatggcacttctggccttgtccaccagctcggtcttctccgctcatgaca 12400479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 8394179 - 8393983
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  8394179 ctttgactccaccatcttgaatgagtagagttgttgcttgaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 8394080  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||| ||||| |  ||||||||||||||  || ||| | | ||||||||||||| | ||||||||    
T  8394079 gatgccgcggttggttccttcgcgacatccctc-aaaatttatccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttctc 8393983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 253
Target Start/End: Original strand, 18536918 - 18537151
Alignment:
Q  20 gattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagac 119  Q
    |||| ||||||||| ||  ||| | |||||||||||||| |||||  ||||||| ||| ||||||||||||| |||||||||||   |||||||||||||    
T  18536918 gattctgttgaactccgcaagttgctccatgatggccttcgactcttccatcttgaatgagtaaagttgttgctttaggaattgccgatgagccaaagac 18537017  T
Q  120 ttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaag 219  Q
    || |||||||||||  |  | ||||||| ||||||||||| | |  |  ||||||| |  ||||| ||  |||||||||||  ||||||||||||||  |    
T  18537018 tttgtcatatacaaatatacgaactttgaccacatcgatgccgcgattggttccttcgctacatctcttaaaactttattcccgaggcacaagacaatgg 18537117  T
Q  220 cactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||| | | ||||||||| ||| | ||||||||    
T  18537118 cactcttggccttgtccactatctcggtcttctc 18537151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 5207025 - 5207161
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||| |||||||||||||||| |||||||| | ||||| | || |||| ||  ||| ||||||||| |||| | |||||| ||||||| |||  |||||    
T  5207025 atcataaaggattttgttgaacgtcgttagttgctccattacggtctttaacctcactatcttaaatgagtagatttgttgatttaggatttgtctatga 5207124  T
Q  111 gccaaagacttggtcatatacaatgactccaactttg 147  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  5207125 gccaaagactttgtcatatacaaagactccaactttg 5207161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 36920903 - 36921051
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||||||||||||||  |||||||| ||| ||||||||||||| |||| || |||   ||||    
T  36920903 atcaccaatgattttgttgaactccacaagtagctccatgatggcctttgactttaccatcttgaatgagtaaagttgttgctttaagacttgccaatga 36921002  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || ||||||| |||||||||||    
T  36921003 gccaaagactttgtcatatacaaatattcaaactttgaccacatcgatg 36921051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 47563683 - 47563535
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| ||||||||||||||| | |  |||||||| ||| ||||||||||||| |||||||||||   ||||    
T  47563683 atcaccaatgattttgttgaactccacaagtagctccatgatggcctttaaatttaccatcttgaatgagtaaagttgttgctttaggaattgtcgatga 47563584  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||| ||||| ||||||||||| || |||||||||  |||||||||||    
T  47563583 gccaacgactttgtcatatacaaagattccaacttttcccacatcgatg 47563535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 146
Target Start/End: Complemental strand, 4588713 - 4588623
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaacttt 146  Q
    |||||||||||||||||| ||| |||| | |||||| || ||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  4588713 ctttgactccaccatcttgaatgagtagaattgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgactccaacttt 4588623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 14788838 - 14788986
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  14788838 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgccgatga 14788937  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || | ||||| |||||||||||    
T  14788938 gccaaagactttgtcatatacaaatattcgatctttgaccacatcgatg 14788986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 9175878 - 9176025
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||| ||  ||||| | ||| |||| ||| |||| |||||||||||   || ||    
T  9175878 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgagtcttccatcctgaatgagtagagtcgttgctttaggaattgccgatcag 9175977  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || ||| |||||  |||||||||||    
T  9175978 ccaaagactttgtcatatacaaagattcccacttttcccacatcgatg 9176025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 3578133 - 3578247
Alignment:
Q  45 tccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaact 144  Q
    |||||||||| ||||| |||||||||||| ||| |||| |||||||| ||||  | |||   |||| |||||||||| |||||||| || ||||||||||    
T  3578133 tccatgatggactttgtctccaccatcttgaatgagtagagttgttgctttaaaagttggcgatgatccaaagactttgtcatatataaagactccaact 3578232  T
Q  145 ttggccacatcgatg 159  Q
    ||| |||||||||||    
T  3578233 ttgaccacatcgatg 3578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 22802142 - 22802384
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||| || | |||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  22802142 atcaccaatgattttgttgaactccacaagtagctccacgacgacctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgccgatga 22802241  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| |||||| |||| | |  |   ||||||||   | || ||| || ||||||||  ||||||||    
T  22802242 gccaaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttgtttcctttgttgcttctctcaaatctttattcccgaggcaca 22802341  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  22802342 agacaatggcactcctggccttgtccaccatctcggtcttctc 22802384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 42191445 - 42191542
Alignment:
Q  57 tttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacat 154  Q
    ||||||||||| ||| ||||| |||| |||| |||||||||||||||| ||||| |||| ||||||||||| || |||||||| ||||| | ||||||    
T  42191445 tttgactccactatcctaaatgagtagagtttttgttttaggaattgactatgaaccaacgacttggtcatgtataatgactctaacttagcccacat 42191542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 9225084 - 9224985
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||  ||||||||||||| || ||||||||||||||||||||||| | |||||||||||    
T  9225084 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 9224985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 16454231 - 16453989
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   | ||| || ||| ||||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  16454231 atcaccaatgattttgttgaactccacaattagctctatggtggcctttgactttaccatcttgaattagtaaagttgttgctttaggacttgtcgatga 16454132  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||| ||| ||| |||||||  | || || |||| ||||||||||| | |  |    | |||||  || || ||||||||||||||| |||||||||    
T  16454131 gccaaagtctttgtcgtatacaaatattcaaaatttgaccacatcgatgtcgcggttgtatactttgctacttctctcgaaactttattcatgaggcaca 16454032  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||   ||| || | | ||||||||||||| | ||||||||    
T  16454031 agacattggcaatcctggccttgtccaccatctcggtcttctc 16453989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 16624685 - 16624586
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || ||   |||||||||| || || ||||| ||||||||||||||||| | |||||||||||    
T  16624685 gactccaccatcttgaatgaatagagttgttgtttcaagagtttcctatgagccaacgatttcgtcatgtacaatgactccaacttagcccacatcgatg 16624586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 253
Target Start/End: Complemental strand, 36379144 - 36378970
Alignment:
Q  79 agtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttga 178  Q
    ||||||||||||| ||||||| |||   ||||||||||||||| |||||||||||  | || ||||||| | ||||||||| |||  |  ||||||| |     
T  36379144 agtaaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgactacatcgatgccacggttggttccttcgc 36379045  T
Q  179 gacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
     || || ||| || ||||||||  ||||||||||||||   ||||| |   ||||||||||||| | ||||||||    
T  36379044 tacttctctcaaatctttattcccgaggcacaagacaatgacactcctgaccttgtccaccatctcggtcttctc 36378970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 5350635 - 5350578
Alignment:
Q  45 tccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaatt 102  Q
    ||||||| ||| |||||||||||| |||||||| |||| ||||||||||||| |||||    
T  5350635 tccatgacggcatttgactccaccttcttaaatgagtagagttgttgttttaagaatt 5350578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 3501941 - 3501875
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaat 77  Q
    |||||||||||||||||||||||| || | | | ||  ||||||| ||||| |||||||||||||||    
T  3501941 atcatcaaggattttgttgaactttgtcaattgctctgtgatggcttttgattccaccatcttaaat 3501875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 264
Target Start/End: Complemental strand, 5350539 - 5350453
Alignment:
Q  179 gacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtc-ttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||| ||| ||||||||| |  |||||||||||||| | | |||||| || |||||||||||| ||||||||||  |||||||||    
T  5350539 gacatctctcaaaactttatccccgaggcacaagacaatatccctcattttccttgtccaccatctcagtcttctccacttatgaca 5350453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 9e-46; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 43226929 - 43226688
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||||||| ||| |||| |||||||| |||||||||||   |||||    
T  43226929 tcatcaaggattttgttgaacttcgtaagttgctccatgatggtctttgactccaccatcttgaatgagtagagttgttgctttaggaattgccgatgag 43226830  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |  |||||||||  || || ||| |||||||||    |||||||||    
T  43226829 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttcgttcctttgctacttctctcaaaactttatctccgaggcacaa 43226730  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  43226729 gacaatggcactcctcgccttgtccaccatctcggtcttctc 43226688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 7763077 - 7762824
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||||| | | ||||| | || |||||||||||||||||||||| | || |||||||| || | ||||||  |||||    
T  7763077 atcatcaaggattttgttgaactccgttaattgctccatcacggtctttgactccaccatcttaaatgaatagagttgttgcttaaagaattgcttatga 7762978  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||  | |  | |||||||| | |||||||||  ||||||| |    ||||||||    
T  7762977 gccaaagacttggtcatatataatgactccaactttgaccacatcgattccgcggttagttccttcgcgacatcccttaaaactttgtcaccgaggcaca 7762878  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  7762877 agacaatggcactcttagccttgtccaccatctcggtcttctccgcttgtgaca 7762824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 10957729 - 10957970
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  10957729 tcatcaaggattttgttgaacttcgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 10957828  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| |||  |  |||||||||  || || ||| ||||||||| || |||||||||    
T  10957829 ccaaagactttgtcatatacaaagattccaactttgcccaaatcgatgccacggttggttcctttgctacttctctcaaaactttatcctcgaggcacaa 10957928  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  | |||| | | |||||| |||||| | ||||||||    
T  10957929 gacaatggaactcctggccttgtctaccatctcggtcttctc 10957970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 456759 - 456514
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||||| ||| |||| |||||||| |||||||||||   |||||    
T  456759 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcttgaatgagtagagttgttgctttaggaattgccgatgag 456660  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| |||||||||    |||||||||    
T  456659 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctacttctctcaaaactttatctccgaggcacaa 456560  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgct 257  Q
    |||||  |||||| | | ||||||||||||| | ||||||||||||    
T  456559 gacaacggcactcctggccttgtccaccatctcggtcttctctgct 456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 37407495 - 37407242
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||| ||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  37407495 atcatcaaggattttgttgaactccgccaattgctccatcacggtctttaactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 37407396  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| |||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||    
T  37407395 gccaaagacttggtcatatacaacgactccaactttgaccacattgatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcaca 37407296  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  37407295 agacaatggcactcctagccttgtccaccatctcggtcttctccgcttgtgaca 37407242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 5192502 - 5192250
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | || ||||||||||||||||| |||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  5192502 tcatcaaggattttgttgaactccgtaagttgctcaatgatggcctttgactctaccatcctgaatgagtagagtcgttgctttaggaattgctgatgag 5192403  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | || |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  5192402 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcagttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 5192303  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  5192302 gacaatggcactcttggccttgtccaccatctcggtcttctccgcttgtgaca 5192250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 5898261 - 5898009
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||| ||| |||||||||||||||||| |||| |||||||| |||| ||||||   |||||    
T  5898261 tcatctaggattttgttgaactccgtaagttgctccatgatggtcttcgactccaccatcttaaatgagtagagttgttgctttaagaattgccgatgag 5898162  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |  |||||||||  || ||  || ||||||||| |  |||||||||    
T  5898161 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctacttctatcaaaactttatccccgaggcacaa 5898062  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | ||||||||||||| |||||    
T  5898061 gacaatggcactcctggccttgtccaccatctcggtcttctctgcttgtgaca 5898009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 6065199 - 6065440
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| || ||||| ||| |||| |||||||| |||||||||||   |||||    
T  6065199 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctacgatcttgaatgagtagagttgttgctttaggaattgccgatgag 6065298  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||| ||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| || |||||||||    
T  6065299 ccaaagactttgtcgtatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatcctcgaggcacaa 6065398  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  6065399 gacaacggcactcctgggcttgtccaccatctcggtcttctc 6065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 18098577 - 18098817
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | |||||||| |||||||| |||||||||||  ||||||    
T  18098577 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactcaaccatcctgaataagtagagttgttgctttaggaattgcctatgag 18098676  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||| ||||| |||||| |||| | |  |  |||||||||  || || ||| |||||||| ||  ||||| |||    
T  18098677 ccaaagactttgtcatatacaaagattccatctttgcccacattgatgccgcggttggttcctttgctacttctctcaaaacttta-tcccgaggcgcaa 18098775  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  18098776 gacaatggcactcctggccttgtccaccatctcggtcttctc 18098817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 29811675 - 29811444
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||||| | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  29811675 atcatcaaggattttgttgaactccgttaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcttatga 29811576  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||| |||| |||||||||||||||||||||| |||||| || |   |  || ||||||| | |||||||||| ||||||| |    ||||||||    
T  29811575 gccaaagacctggttatatacaatgactccaactttgaccacatggacgctgcggtaggttccttagcgacatccctcaaaactttgtcaccgaggcaca 29811476  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||  |||||| | | |||||||||||||    
T  29811475 agacaatggcactcctagccttgtccaccatc 29811444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 5259684 - 5259926
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  |  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  5259684 atcatcaaggattttgttgaactctgccaattgctccatcaaggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 5259783  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| |||| | |  |  ||||||| | |||||||||  ||||||| | || ||||||||    
T  5259784 gccaaagacttggtcatatacaacgactccaactttgaccacatagatgccgcggttggttccttcgcgacatcccttaaaactttttcctcgaggcaca 5259883  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | | ||||||||||| | ||||||||    
T  5259884 agacaatggcactcctagccatgtccaccatctcggtcttctc 5259926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 7769407 - 7769260
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||| | ||||| ||| ||| | |||||||| |||||||||||||||||||| ||| |||| |||||||  |||||||||||   |||||    
T  7769407 tcatcaaggattttttagaactccgtaagttgctccatgatagcctttgactccaccatcttgaatgagtagagttgtttctttaggaattgccgatgag 7769308  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  7769307 ccaaagactttgtcatatacaaagactccaactttgaccacatcgatg 7769260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 23199500 - 23199731
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| |||| |||||||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  23199500 atcatcaaggattttgttgaactccgccaattgctccatcatggtctttgactccaccatcttgaatgattagagttgttgcttaaggaattgcctatga 23199599  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| || |||||||||| ||| ||||||| | |  |  ||||||| |  ||||||||| ||||||| | |  ||||||||    
T  23199600 gccaaagacttggtcatatacaacgattccaactttgaccatatcgatgtcgcggttggttccttcgcaacatccctcaaaactttgtccccgaggcaca 23199699  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||  |||||| | | |||||||||||||    
T  23199700 agacaatggcactcctagccttgtccaccatc 23199731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 23634297 - 23634057
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||||||||   | | | | ||||||||||||||||||||||||||||| ||| | || |||||||| ||||| |||||   |||||    
T  23634297 tcatcaaggattttgttgaactctataaattgctccatgatggcctttgactccaccatcttgaatgactagagttgttgctttagaaattgccgatgag 23634198  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| || ||||||||   | ||  ||||||| |  || || ||| ||||||||| | ||||||||||    
T  23634197 ccaaagactttgtcatatacaaagattccaactttgacctcatcgatgatgcgtt-ggttccttcgctacttctctcaaaactttatccctgaggcacaa 23634099  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | || |||||||||||| ||||||||||    
T  23634098 gacaatggcactcctggtattgtccaccatctcagtcttctc 23634057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 11168953 - 11168806
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| ||||||   ||| |||| ||| |||| |||||||||||   |||||    
T  11168953 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatccagaatgagtagagtagttgctttaggaattgccgatgag 11168854  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  11168853 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatg 11168806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 3315535 - 3315293
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| ||| |||||||||||||||| |||||||| ||| | ||||||||||| |||||||||||   ||||    
T  3315535 atcaccaatgattttgttgaactccacaagtagctccgtgatggcctttgactctaccatcttgaatgaataaagttgttgctttaggaattgccgatga 3315436  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | ||||||||||  |||||||||| | |  |  |||||||||  || || ||| ||||||||| |  ||||||||    
T  3315435 gccaaagactttgtcatatacaaatattccaactttgcacacatcgatgtcgcggttggttcctttgctacttctctcaaaactttatccccgaggcaca 3315336  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  3315335 agacaatggcactcctggccttgtccaccatctcggtcttctc 3315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 10210003 - 10209765
Alignment:
Q  15 tcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagcca 114  Q
    |||||||| |||||||||| ||  | | | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||    
T  10210003 tcaaggatcttgttgaactccgccaattgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagcca 10209904  T
Q  115 aagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagac 214  Q
    | |||||||||||||||||||| |||||||| | ||| ||||||| | |  |  ||||||| | |||||||||| ||||||||| |  ||||||||||||    
T  10209903 acgacttggtcatatacaatgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttatccccgaggcacaagac 10209804  T
Q  215 aaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||  || ||| | | ||||||||||||| | ||||||||    
T  10209803 aatggcgctcctcgccttgtccaccatctcggtcttctc 10209765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 4309916 - 4310051
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||| |||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  4309916 tcatcaaggattttgttgaactccgtaagttgctccatgatggtctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 4310015  T
Q  112 ccaaagacttggtcatatacaatgactccaactttg 147  Q
    |||||||||| ||||||||||| || | ||||||||    
T  4310016 ccaaagactttgtcatatacaaagatttcaactttg 4310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 27421490 - 27421347
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||| |||||||||| ||| ||| | ||||||||| |||||||||| |||||||| ||| |||||||||||||||||||||||||   |||||    
T  27421490 tcatcaaggatcttgttgaactccgtaagttgctccatgatgacctttgactctaccatcttgaatgagtaaagttgttgttttaggaattgccgatgag 27421391  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    ||||||| || ||||   |||| ||||||||||||| |||||||    
T  27421390 ccaaagattttgtcaataacaacgactccaactttgaccacatc 27421347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 9635485 - 9635738
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||  | | | ||||| | || |||||| | ||||||||| ||| |||| | |||||| || ||||||||  |||||    
T  9635485 atcatcaaggattttgttgaactacgccaattgctccatcacggtctttgaatgcaccatcttgaatgagtagatttgttgcttaaggaattgcctatga 9635584  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||||||||||||||| | ||||||||||| |||| | |||| | |  |  ||||||| | |||||||||| ||||||| | |  |||||| |    
T  9635585 gccaaagacttggtcatatacaacggctccaactttgaccacgtagatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcata 9635684  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  9635685 agacaatggcactcctagccttgtccaccatctcggtcttctccgcttgtgaca 9635738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 15830603 - 15830807
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  ||| || | ||    | || |||||||||||||||||||||| ||||||||| ||| |||||||||||  |||||    
T  15830603 atcatcaaggattttgttgaactctgttggttgctctgctacggtctttgactccaccatcttaaatgagtaaagttcttgctttaggaattgcctatga 15830702  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
     ||| |||||| |||||||||||| |||||||||||| |||| |||||| |    || ||||||| | ||||| |||  ||||||||| |||||||||||    
T  15830703 accatagacttagtcatatacaataactccaactttgaccacctcgatgtcgtggtaggttccttcgcgacat-cctgaaaactttatccttgaggcaca 15830801  T
Q  211 agacaa 216  Q
    ||||||    
T  15830802 agacaa 15830807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 22834370 - 22834616
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| ||||||||||||| ||| | | | ||  | | || |||| ||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  22834370 atcatcaagaattttgttgaactccgtcaattgctctgtcacggtctttaactccaccatcttgaatgaatagagttgttgcttaaggaattgcctatga 22834469  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| | | |  |  ||||||| | |||||||||| |||||||||    ||||||||    
T  22834470 gccaaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcgcgacatccctcaaaactttatcaccgaggcaca 22834569  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
    ||||||  |||||| | | | ||||||||||| | |||||||| ||||    
T  22834570 agacaatggcactcctag-cctgtccaccatctcggtcttctccgctt 22834616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 32891851 - 32891752
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||| ||||||| |||| |||||||| || ||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  32891851 ctttgactccaccaccttaaatgagtagagttgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgactccaactttgaccacatc 32891752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 6717319 - 6717077
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||| |||||||||| ||  | | | || || | || |||||||||||||||||| ||| |||| |||||| | || ||||| ||  |||||    
T  6717319 atcatcaaggatcttgttgaactccgccaattgctctatcacggtctttgactccaccatcttgaatgagtagagttgtcgcttaaggaaatgtctatga 6717220  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||| ||||||||||||||||| || |||||||| | ||| ||||||| | |  |  ||||||| | |||||||||| ||||||||| |  ||||||||    
T  6717219 gccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttatccccgaggcaca 6717120  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  6717119 agacaatggcactcctcgccttgtccaccatctcggtcttctc 6717077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 15822047 - 15822181
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||| ||||||||||||||||||||||||| | ||  | | || ||||||||||||||| |||||  |||| |||||||| ||||||||||  ||||||    
T  15822047 atcattaaggattttgttgaacttcgttagttgctctgttaaggtctttgactccaccattttaaacgagtagagttgttgctttaggaattacatatga 15822146  T
Q  111 gccaaagacttggtcatatacaatgactccaactt 145  Q
    || |||||||| ||||||||||||| |||||||||    
T  15822147 gctaaagacttagtcatatacaatgcctccaactt 15822181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 53917079 - 53917321
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||||| ||||||||  |||||||||||| ||||||||||||| ||||||| |||   ||||    
T  53917079 atcaccaatgattttgttgaactccacaagtagctccatgatggtctttgactttaccatcttaaatgagtaaagttgttgctttaggacttgccgatga 53917178  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| ||||||||||| | || |   ||||||||   | || ||||||| ||||| |  ||||||||    
T  53917179 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgtttcctttgttgcttctctcgaaaatttatacccgaggcaca 53917278  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||   ||||| | | ||||||||||||| | ||||||||    
T  53917279 agacaatgacactcctggccttgtccaccatctcggtcttctc 53917321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Original strand, 4600126 - 4600323
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  4600126 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 4600225  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  || ||| | | ||||||||||||| | ||||||||    
T  4600226 gatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttctc 4600323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 10057006 - 10056809
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  10057006 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 10056907  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  || ||| | | ||||||||||||| | ||||||||    
T  10056906 gatgccgcagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccaccatctcggtcttctc 10056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 10061450 - 10061253
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  10061450 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 10061351  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  || ||| | | ||||||||||||| | ||||||||    
T  10061350 gatgccgcagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccaccatctcggtcttctc 10061253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 10063672 - 10063475
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  10063672 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 10063573  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  || ||| | | ||||||||||||| | ||||||||    
T  10063572 gatgccgcagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccaccatctcggtcttctc 10063475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 10065894 - 10065697
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  10065894 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 10065795  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  || ||| | | ||||||||||||| | ||||||||    
T  10065794 gatgccgcagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccaccatctcggtcttctc 10065697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 1619882 - 1620132
Alignment:
Q  13 catcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagc 112  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||  ||||  | |  |||||| ||| |||| |||||||| ||||||||||    ||||||    
T  1619882 catcaaggattttgttgaactccgtaagttgctccatgatggattttgt-tgcttcatcttgaatgagtagagttgttgctttaggaattaccaatgagc 1619980  T
Q  113 caaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaag 212  Q
    ||||||||| ||||||| ||| ||||||||||||| ||||||||||| | || |  || |||| |  |||||  || ||||||||| |  ||||||||||    
T  1619981 caaagactttgtcatatgcaaagactccaactttgaccacatcgatgccgcagtttgtaccttcgctacatctatcaaaactttatccccgaggcacaag 1620080  T
Q  213 acaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  1620081 acaatggcactcctggccttgtccaccatccccgtcttctccgcttttgaca 1620132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 253
Target Start/End: Complemental strand, 10059221 - 10059031
Alignment:
Q  63 tccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatggca 162  Q
    ||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| ||||||| |     
T  10059221 tccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccg 10059122  T
Q  163 cattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    || |  ||||||| | |||||||||| ||||||| | |  |||||||| |||||  |||||| | | ||||||||||||| | ||||||||    
T  10059121 cagttggttccttcgcgacatccctcaaaactttgtccccgaggcacaggacaatggcactcctcgccttgtccaccatctcggtcttctc 10059031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 23409742 - 23409940
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||||||||||||||| |||||||| || |||| |||  ||||||||||||| |||||||||||||||||||| || |||| ||| ||||| |    
T  23409742 gactccaccatcttaaataagtagagttgttgcttaaggagttgcctatgagccaaagatttggtcatatacaatgactcaaaatttgaccatatcgacg 23409841  T
Q  160 gcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
     | |  || ||||||| | |||||||||| ||||||| | |  |||| |||||||||   ||||| | |  |||||||||||| | |||||||| ||||    
T  23409842 ccgcggtaggttccttcgcgacatccctcaaaactttgtccccgaggtacaagacaatgtcactcctagcattgtccaccatctcggtcttctcggctt 23409940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 32479698 - 32479846
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||||||| | || |||||||| || | || |||  |||||    
T  32479698 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttaaatgaatagagttgttgcttcaagagttgcctatga 32479797  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  32479798 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 32479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 25634696 - 25634589
Alignment:
Q  45 tccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaact 144  Q
    ||||||||||||||||||||||||||||| ||| |||| |||||| | |||||||||||   ||||| ||||||||| |||||||| || ||||| ||||    
T  25634696 tccatgatggcctttgactccaccatcttgaatgagtagagttgtggctttaggaattgctgatgagtcaaagactttgtcatatataaagactctaact 25634597  T
Q  145 ttggccac 152  Q
    ||| ||||    
T  25634596 ttgaccac 25634589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 264
Target Start/End: Original strand, 28101413 - 28101666
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| | | ||||| ||||||||||||||| |||  |||||||| ||| |||| |||||||  ||||||||||    ||||    
T  28101413 atcaccaatgattttgttgaactccataagtagctccatgatggcctttaactttaccatcttgaatgagtagagttgttactttaggaattaccgatga 28101512  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| |||||| |||| | |  |  |||| ||||  || ||  ||||||||||||||  ||||||||    
T  28101513 gccaaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttggttcttttgctacttctatcgaaactttattcccgaggcaca 28101612  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||| ||  | |||| | | ||||||||| ||| | |||||||| |||| |||||    
T  28101613 agagaatggaactcctggccttgtccactatctcggtcttctccgcttgtgaca 28101666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 42991152 - 42991004
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   || || |||| || |||||||||||  ||||| || ||| ||||||||||||| ||||||| |||   ||||    
T  42991152 atcagcaatgattttgttgaactccacaagcagctccaagaaggcctttgactttaccatattgaatgagtaaagttgttgctttaggacttgccgatga 42991053  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||| || || |||||||||| |||||||||||    
T  42991052 gccaaagactttgtcatatataaagattccaactttgcccacatcgatg 42991004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 43422903 - 43423021
Alignment:
Q  39 agtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgact 138  Q
    ||||| |||||||||||||||||||  || |||   ||| ||||||||||||| ||| ||| |||   ||||||||||||||| ||||||||||| || |    
T  43422903 agtagctccatgatggcctttgactttacaatcc--aatgagtaaagttgttgatttgggacttgccgatgagccaaagactttgtcatatacaaagatt 43423000  T
Q  139 ccaactttggccacatcgatg 159  Q
    ||||||||| |||||||||||    
T  43423001 ccaactttgcccacatcgatg 43423021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 8516452 - 8516600
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||||||| | || |||||||| || | || |||  |||||    
T  8516452 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttaaatgaatagagttgttgcttcaagagttgcctatga 8516551  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || |||||||| |||||||| ||||||| |||||||||||    
T  8516552 gccaaagatttcgtcatatataatgactctaactttgcccacatcgatg 8516600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 30844905 - 30845037
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||| || | | | || |||||||  || || ||||||||  | ||| |||| |||| |||| | | ||||||  |||||    
T  30844905 atcatcaaggattttgttgaactttgtcaattgctctatgatggttttagattccaccattctgaatgagtagagtttttgtatgatgaattgtctatga 30845004  T
Q  111 gccaaagacttggtcatatacaatgactccaac 143  Q
    ||||| |||||||| |||||||| |||||||||    
T  30845005 gccaatgacttggttatatacaacgactccaac 30845037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 36332 - 36080
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  36332 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 36233  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    | |||||||| ||||||||||| || |||||||||| ||||||||||| | |  ||  ||||||||  || || ||| ||||||||| |  |||||||||    
T  36232 ctaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggtagcttcctttgctacttctctcaaaactttatccccgaggcacaa 36133  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  36132 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 36080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 38394868 - 38394616
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||||| ||| |||| |||||||| |||||||||||   |||||    
T  38394868 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcttgaatgagtagagttgttgctttaggaattgccgatgag 38394769  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  38394768 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 38394669  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  38394668 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 38394616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 13289905 - 13290157
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||| ||||||||||| | | ||| | ||||||||||||||| ||||||||||||| ||| |||| |||||||| ||||||||||    |||||    
T  13289905 tcatcaaggaatttgttgaactccataagttgctccatgatggcctttaactccaccatcttgaatgagtagagttgttgctttaggaattaccgatgag 13290004  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| ||| | |  |  |||||||||  ||||| ||| ||||||||| | ||||||||||    
T  13290005 ccaaagactttgtcatatacaatgactccaactttgaccacatcaatgtcccggttggttcctttgctacatctctcaaaactttatccctgaggcacaa 13290104  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||   ||||  | | ||||||||||||| | |||||||| |||| |||||    
T  13290105 gacaatgacacttctggccttgtccaccatctcggtcttctccgcttgtgaca 13290157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 7093867 - 7094014
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  7093867 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgtcgatgag 7093966  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||    
T  7093967 ccaaagactttgtcatatacaaagactccaactttgcccacatcgatg 7094014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 47675499 - 47675740
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||||| | | ||||| |  | |||||||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  47675499 atcatcaaggattttgttgaactccgttaattgctccatcacagtctttgactccaccatcttgaatgattagagttgttgcttaaggaattgcctatga 47675598  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||| | | |  || ||||||||| |||||||||| ||||||| |    ||||||||    
T  47675599 gccaaagatttggtcatatacaatgactcaaactttgaccacatcgacgccgcggtaggttcctttgcgacatccctcaaaactttgtcaccgaggcaca 47675698  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttct 252  Q
    | ||||  |||||| | | ||||||||||||| | |||||||    
T  47675699 atacaatggcactcctagccttgtccaccatctcggtcttct 47675740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 7351057 - 7351298
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||| |||||||||| |||||||| ||| |||| |||||||| |||||||||||   |||||    
T  7351057 tcatctaggattttgttgaactccgtaagttgctccatgatgacctttgactctaccatcttgaatgagtagagttgttgctttaggaattgccgatgag 7351156  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || ||  || ||||||||| |  |||||||||    
T  7351157 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctttcaaaactttatccccgaggcacaa 7351256  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  7351257 gacaacggcactcctggccttgtccaccatctcggtcttctc 7351298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 1048695 - 1048947
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   ||| |    
T  1048695 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgcg 1048794  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  1048795 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 1048894  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| |   ||||||||||||| | |||||||| |||| |||||    
T  1048895 gacaatggcactcctgaccttgtccaccatctcggtcttctccgcttgtgaca 1048947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 44725457 - 44725228
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| | | ||| | || |||||||||||||||||||||||| | |||||||| |||||||  |||||||||||   |||||    
T  44725457 tcatcaaggattttgttgaactccataagttgctctatgatggcctttgactccaccatcctgaataagtagagttgttactttaggaattgccgatgag 44725358  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |  |||||||||  || || ||| ||||||||| |  |||||||||    
T  44725357 ccaaagactttgtcatatacaaagattccaactttgcccaaatcgatgccgcggttggttcctttgctacttctctcaaaactttatccccgaggcacaa 44725258  T
Q  212 gacaaaagcactcattgtcttgtccaccat 241  Q
    |||||  |||||| |   ||||||||||||    
T  44725257 gacaatggcactcctgaccttgtccaccat 44725228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 22135685 - 22135433
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  22135685 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 22135586  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| || |||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  22135585 ccaaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 22135486  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  ||||||   | ||||||||||||| | |||||||| |||| |||||    
T  22135485 gacaacggcactccgggccttgtccaccatctcggtcttctccgcttgtgaca 22135433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 40550712 - 40550460
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  40550712 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 40550613  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| || |||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  40550612 ccaaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 40550513  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  ||||||   | ||||||||||||| | |||||||| |||| |||||    
T  40550512 gacaacggcactccgggccttgtccaccatctcggtcttctccgcttgtgaca 40550460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 6570793 - 6570563
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| ||||| ||||||| ||||| | | ||  | | || |||||||||||| ||||| ||| || | |||||||| || ||||||||  |||||    
T  6570793 atcatcaagtattttattgaactccgttaattgctctgttacggtctttgactccacaatcttgaatgaggagagttgttgcttaaggaattgcctatga 6570694  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||| | |||| || ||||||| | |||||||||| ||| ||||| |  ||||||||    
T  6570693 gccaaagatttggtcatatacaatgactgcaactttgaccacatcgacgccacaataggttccttcgcgacatccctcaaaattttatccccgaggcaca 6570594  T
Q  211 agacaaaagcactcattgtcttgtccaccat 241  Q
    ||||||   ||||| | | ||||||||||||    
T  6570593 agacaatgacactcctagccttgtccaccat 6570563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 188
Target Start/End: Complemental strand, 48490211 - 48490034
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||| ||||||||||||||||| |||||   | ||||| | || |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  48490211 atcattaaggattttgttgaactccgttaaatgctccatcacggtctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatga 48490112  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctc 188  Q
    |||||||| || || |||||||||||||||||||||| ||||||||| | | || || ||||||| | ||||||||||    
T  48490111 gccaaagattttgtaatatacaatgactccaactttgaccacatcgacgccgcagtaggttccttcgcgacatccctc 48490034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 26213601 - 26213460
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||| ||||||||||||||  || |||   ||||||| ||||||||||||||||||||| ||| |||| |||||||| ||||||||||| | |||||    
T  26213601 tcatcaaagattttgttgaactctgtaagtttctccatga-ggcctttgactccaccatcttgaatgagtagagttgttgctttaggaattgcaaatgag 26213503  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacat 154  Q
    ||||||| |||||| |||||||||||||||| |||| ||||||    
T  26213502 ccaaagatttggtcctatacaatgactccaaatttgaccacat 26213460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 253
Target Start/End: Original strand, 6593940 - 6594137
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  6593940 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 6594039  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||||||| | |  ||||||||||||||  || ||| ||| ||||||||||||| | ||||||||    
T  6594040 gatgccgcggttggttccttcgcgacatccctcaaaactttgtccccgaggcacaagacaatggcgctccttgccttgtccaccatctcggtcttctc 6594137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 56 - 253
Target Start/End: Original strand, 18391578 - 18391775
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| |||| |||||||| || ||||||||  |||||||||| ||||||||||||||||| || |||||||| | ||| |||    
T  18391578 ctttgactccaccatcttgaatgagtagagttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatc 18391677  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||| | |  |  ||||||| | |||||||||| ||||||||| |  ||||||||||||||  || ||| | | ||||||||||||| | ||||||||    
T  18391678 gatgccgcggttggttccttcgcgacatccctcaaaactttatccccgaggcacaagacaatggcgctcctcgccttgtccaccatctcggtcttctc 18391775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 7471386 - 7471617
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| |||||| |||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  7471386 atcaccaatgattttgttgaactccacaagtagctccatgatagccttttactttaccatcttgaatgagtaaagttgttgctttaggacttgccgatga 7471485  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |    |||||||  || || |||||||||||||||  ||||||||    
T  7471486 gccaaagactttgtcatatacaaagattccaactttgaccacatcgatgccgcggttgtatcctttgttacttctctcgaaactttattcccgaggcaca 7471585  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||  || ||| | | |||||||||||||    
T  7471586 agacaatggccctcctggccttgtccaccatc 7471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 253
Target Start/End: Complemental strand, 24749470 - 24749228
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| ||||||||||||||||||||||||||| | ||| |||| |||| ||| |||||||||||   || |    
T  24749470 atcaccaatgattttgttgaactccacaagtagctccatgatggcctttgactccaccatcctgaatgagtagagttattgctttaggaattgccgatca 24749371  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| ||||||||||| || | |||||||| ||||||||||| ||   |  |||| ||||  || || ||| ||||||||| |  ||||||||    
T  24749370 gccaaagactttgtcatatacaaagatttcaactttgcccacatcgatgccatggttggttcttttgctacttctctcaaaactttatccccgaggcaca 24749271  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||  | | ||||||||||||| | ||||||||    
T  24749270 agacaatggcacttttggccttgtccaccatctcggtcttctc 24749228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 31159108 - 31159227
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  31159108 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 31159207  T
Q  112 ccaaagacttggtcatatac 131  Q
    |||||||||| |||||||||    
T  31159208 ccaaagactttgtcatatac 31159227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 24816776 - 24816890
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||| ||||||||||||| ||| ||| | ||||||||| ||||||| ||||||||||| ||| |||| |||||||| ||||||||||| | |||||    
T  24816776 tcatcaagaattttgttgaactccgtaagttgctccatgatgacctttgaatccaccatcttgaatgagtagagttgttgctttaggaattgtagatgag 24816875  T
Q  112 ccaaagacttggtca 126  Q
    |||||||||| ||||    
T  24816876 ccaaagactttgtca 24816890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 20298198 - 20298045
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   || || ||||||| |||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  20298198 atcaccaatgattttgttgaactccacaagcagctccatgaaggcctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgtcgatga 20298099  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcaca 164  Q
    ||||||||||| ||||||||||| || ||| |||||| ||||||||||| ||||    
T  20298098 gccaaagactttgtcatatacaaagattccgactttgcccacatcgatgtcaca 20298045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 6047330 - 6047231
Alignment:
Q  48 atgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttg 147  Q
    ||||||| |||||||||||||||||| ||| |||| |||||||| |||||||||||  ||||||||||||| ||| |||||||||| |||||||| ||||    
T  6047330 atgatggactttgactccaccatcttgaatgagtagagttgttgctttaggaattgcgtatgagccaaagatttgttcatatacaacgactccaaatttg 6047231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 16884285 - 16884433
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||||||| | || |||||||| || | || |||  |||||    
T  16884285 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttaaatgaatagagttgttgcttcaagagttgcctatga 16884384  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  16884385 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 16884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 28486448 - 28486300
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||    ||||    
T  28486448 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccgatga 28486349  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || ||||||| |||||||||||    
T  28486348 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatg 28486300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 4295401 - 4295588
Alignment:
Q  66 accatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacat 165  Q
    |||||||| ||| ||||||||||||| ||||||| |||   ||||||||||||||| ||||||||||| || |||||||||  ||||||||||| | |      
T  4295401 accatcttgaatgagtaaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaagattccaacttttcccacatcgatgccgcgg 4295500  T
Q  166 taagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |    |||||||   | || ||||||||||||||| |||||||||||||||   ||||| | | ||||||||||||| | ||||||||    
T  4295501 ttttatcctttgttgcttctctcgaaactttattcctgaggcacaagacaatgacactcctggccttgtccaccatctcggtcttctc 4295588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 3890796 - 3890938
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||| |||||||||||||||||   ||||| | | ||||||| ||||||||||| |||| || ||| | || |||| | |||||||||||||  |||||    
T  3890796 atcattaaggattttgttgaactctattagttgcttcatgatgacctttgactcccccatatttaatgaatagagttttggttttaggaattgcctatga 3890895  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccaca 153  Q
    | ||||| |||||||||||||||| ||| |||||||| |||||    
T  3890896 gtcaaaggcttggtcatatacaataacttcaactttgcccaca 3890938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 24262052 - 24261904
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| | || |||||||| || | || |||  |||||    
T  24262052 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatga 24261953  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  24261952 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 24261904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 21678942 - 21678711
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| |||||| | |  |||||||| ||| ||||||||||||| |||||||| ||   ||||    
T  21678942 atcaccaatgattttgttgaactccacaagtagctccatgattgccttttattttaccatcttgaatgagtaaagttgttgctttaggaactgccgatga 21678843  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| || | |||||| || || ||||||| ||||||||||| | |  |  |||| || |  || || ||| |||||||||||  ||||||||    
T  21678842 gccaaagactttgtaaaatacaaagattcgaactttgaccacatcgatgtcgcggttggttctttcgttacttctctcaaaactttattcccgaggcaca 21678743  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||  |||||| | | |||||||||||||    
T  21678742 agacaatggcactcttggccttgtccaccatc 21678711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 3903913 - 3903978
Alignment:
Q  89 ttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacat 154  Q
    |||||||||||||||  || ||| ||||||||||||||||||||||||||||||||||| ||||||    
T  3903913 ttgttttaggaattgtctaggagtcaaagacttggtcatatacaatgactccaactttgcccacat 3903978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 378
Target Start/End: Original strand, 8232995 - 8233059
Alignment:
Q  314 ttggtctaaaatgtataattttctttttggtgaagcaaattttggttttcacgtgaactttgttt 378  Q
    ||||| ||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  8232995 ttggtataaaatgaataactttcattttggtgaatcaaattttggttttcacgtgaactttgttt 8233059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 12405744 - 12405843
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || |||||||| || | || |||  ||||||||||||| || ||||||||||||||||||||||| | |||||||||||    
T  12405744 gactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 12405843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 5817865 - 5817766
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| |||| ||||||||||| | || ||   |||||| ||| || || ||||||||||||||||||||||| | |||||||||||    
T  5817865 gactccaccatcttgaatgagtagagttgttgtttcaagagtttcctatgagtcaacgattttgtcatatacaatgactccaacttagcccacatcgatg 5817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 18413065 - 18413164
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  ||||||||||||| || ||||| ||||||||||||||||| |  ||||||||||    
T  18413065 gactccaccatcttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatgtacaatgactccaacttagctcacatcgatg 18413164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 21645432 - 21645531
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | |||||||||||||| | || |||  ||||||| ||||| || ||||| |||||| |||||||||| | |||||||||||    
T  21645432 gactccaccatcttgaatgaataaagttgttgtttcaagagttgcttatgagctaaagatttcgtcatgtacaataactccaacttagcccacatcgatg 21645531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 49091084 - 49091183
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || | ||||||||| | || |||  |||||||||| || || ||||| ||||||||||||||||| | |||||||||||    
T  49091084 gactccaccatcttgaatgaatagaattgttgtttcaagagttgcctatgagccaacgatttcgtcatgtacaatgactccaacttagcccacatcgatg 49091183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 21988327 - 21988412
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactt 145  Q
    |||||||||||||| ||| |||| ||||||||||| | || |||  ||||| |||| || || ||||| |||||||||||||||||    
T  21988327 gactccaccatcttgaatgagtagagttgttgtttcaagagttgcctatgatccaacgatttcgtcatgtacaatgactccaactt 21988412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 9447100 - 9447149
Alignment:
Q  106 tatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||| ||||||||||||||||| ||||| ||| ||| |||||||    
T  9447100 tatgagccaatgacttggtcatatacaacgactcaaaccttgcccacatc 9447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 15 - 264
Target Start/End: Complemental strand, 20301001 - 20300752
Alignment:
Q  15 tcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagcca 114  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| ||||||||||||  ||||||||    
T  20301001 tcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgacgatgagcca 20300902  T
Q  115 aagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagac 214  Q
    ||||||| ||||||||||| || |||||||||| ||| ||||||| |||  |  |||||||||  || || ||| |||||||||    ||||||||||||    
T  20300901 aagactttgtcatatacaaagattccaactttgcccatatcgatgccacggtttgttcctttgctacttctctcaaaactttatctccgaggcacaagac 20300802  T
Q  215 aaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||  |||||| | | |||||||||||||   |||||||| |||| |||||    
T  20300801 aatggcactcctggccttgtccaccatcttggtcttctccgcttgtgaca 20300752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 257
Target Start/End: Original strand, 28203105 - 28203350
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||| ||||||||||||||||| ||| |||| |||||||| |||||||||||   |||||    
T  28203105 tcatcaaggattttgttgaactccgtcagttgctccatgatggcttttgactccaccatcttgaatgagtagagttgttgctttaggaattgtcgatgag 28203204  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
     ||||||||| ||| ||||||| || |||||||||| ||||||||||| | |  |  |||||||||  || || ||| ||||||||| |  |||||||||    
T  28203205 tcaaagactttgtcttatacaaagattccaactttgcccacatcgatgccgcggttggttcctttgctacttctctcaaaactttatccccgaggcacaa 28203304  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgct 257  Q
    |||||  |||||| | | ||| ||||||||| | ||||||||||||    
T  28203305 gacaatggcactcctggacttatccaccatctcggtcttctctgct 28203350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 51750910 - 51750669
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  51750910 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 51750811  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  51750810 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 51750711  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  51750710 gacaatggcactcctggccttgtccaccatctcggtcttctc 51750669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 28841295 - 28841148
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  28841295 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 28841196  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  28841195 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatg 28841148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 258
Target Start/End: Complemental strand, 31658010 - 31657763
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| ||||| | | ||  | | || |||||||||||||||||| ||| ||||||||||||| || |||||||   ||| |    
T  31658010 atcatcaaggattttgttgaactccgttaattgctctgtcacggtctttgactccaccatcttgaatgagtaaagttgttgcttaaggaatttcctataa 31657911  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| | | |  |  |||||||   |||||||||| ||||||| |    ||||||||    
T  31657910 gccaaagatttggtcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcacgacatccctcaaaactttgtcaccgaggcaca 31657811  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
    ||||||  |||||| | | ||||||||||||| | |||||||||||||    
T  31657810 agacaatggcactcctagccttgtccaccatctcggtcttctctgctt 31657763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 27338539 - 27338686
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||| |||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  27338539 tcatcaaggattttgttgaactccgtaagttgctccatgatggtctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccaatgag 27338638  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
     ||||||||| ||||||||||| || |||||||||| |||||||||||    
T  27338639 tcaaagactttgtcatatacaaagattccaactttgcccacatcgatg 27338686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 16227041 - 16226789
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  16227041 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcctgaatgagtagagtcgttgctttaggaattgccgatgag 16226942  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||  ||||||||| |  |||||||||    
T  16226941 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgttacttctcttaaaactttatccccgaggcacaa 16226842  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  16226841 gacaacggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 16226789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 51758407 - 51758155
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| |||   |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  51758407 tcatcaaggattttgttgaactccgtaagttactccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgtcgatgag 51758308  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||| ||||||| || ||||| |||| ||||||||||| | |  |   ||||||||  || || ||| ||| ||||| |  |||||||||    
T  51758307 ccaaagactttgtcgtatacaaagattccaattttgcccacatcgatgtcgcggttgcttcctttgctacttctctcaaaattttatccccgaggcacaa 51758208  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  51758207 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 51758155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 50168712 - 50168958
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||||||||||||||||| | ||| | | ||||| | || |||||||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  50168712 atcatcaaggattttgttgaactccattaattgctccatcacggtctttgactccaccatcttgaatgaatagagttgttgcttaaggaattgcctatga 50168811  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||| |||||||||||||||| ||||||||||||| ||| ||||| | |    |  ||||||| | |||||||||| ||||||| |   |||||||||    
T  50168812 gccaaaaacttggtcatatacaa-gactccaactttgaccatatcgacgtcgtggttggttccttcgcgacatccctcaaaactttgtcactgaggcaca 50168910  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctctgctt 258  Q
    ||||||  |||||| | | ||||||||||||| | |||||||| ||||    
T  50168911 agacaatggcactcctagccttgtccaccatctcggtcttctccgctt 50168958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 253
Target Start/End: Complemental strand, 3157424 - 3157227
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatc 155  Q
    |||||||||||||||||| ||| | || |||||||| || ||||||||  ||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  3157424 ctttgactccaccatcttgaatgaatagagttgttgcttaaggaattgtctatgagccaaagacttggtcatatagaatgactccaactttgaccacatc 3157325  T
Q  156 gatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    || | | |  || ||||||| | |||||||||| |||||||      ||||||||||||||  |||||| | | ||||||||||||| | ||||||||    
T  3157324 gacgccgcggtaggttccttcgcgacatccctcaaaactttgccaccgaggcacaagacaatggcactcctagccttgtccaccatctcggtcttctc 3157227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 8348471 - 8348616
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||| |||||||||||||| ||| ||| | | ||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||||   |||      
T  8348471 tcatcaaagattttgttgaactccgtaagttgctacatgatggcctttgactccaccatcttgaatgagtagagttgttgctttaggaattgtcgatgtc 8348570  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcga 157  Q
    |||||||||| ||||||||||| ||||| ||||||| |||||||||    
T  8348571 ccaaagactttgtcatatacaaagactctaactttgaccacatcga 8348616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 47178235 - 47177994
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | ||||||||||||||||||||  ||||| | ||| |||| ||| ||||||||||||||||   |||||    
T  47178235 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactcttccatcctgaatgagtagagtcgttgttttaggaattgccgatgag 47178136  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||| ||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||  ||||||||| |  |||||||||    
T  47178135 ccaatgactttgtcatatacaaagattccaactttgcccacatcgatgccgcgattgcttcctttgctacttctcttaaaactttatccccgaggcacaa 47178036  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||||| | ||||||||    
T  47178035 gacaacggcactcctggccttgtccaccatctcggtcttctc 47177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 31736881 - 31737123
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||    ||||    
T  31736881 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccgatga 31736980  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| ||||||||||| | |  |  |||||||||   | || ||||||||||||| |  ||||||||    
T  31736981 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttcgttcctttgctgcttctctcgaaactttatacccgaggcaca 31737080  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||| | | ||||||||||||| | ||||||||    
T  31737081 agacaatggcactcttggccttgtccaccatctcggtcttctc 31737123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 6996458 - 6996310
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||||| ||||||||  |||||||||||| ||||||||||||| ||||||| |||   ||||    
T  6996458 atcaccaatgattttgttgaactccacaagtagctccatgatggtctttgactttaccatcttaaatgagtaaagttgttgctttaggacttgccgatga 6996359  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || ||||||| |||||||||||    
T  6996358 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatg 6996310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 28222783 - 28222931
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  || | | | ||  | | || |||||||||||||||||| ||| | || |||||||| || ||||||||  |||||    
T  28222783 atcatcaaggattttgttgaactctgtcaattgctctgtcacggtctttgactccaccatcttgaatgaatagagttgttgcttaaggaattgcctatga 28222882  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  28222883 gccaaagatttggtcatatacaatgacaccaactttgaccacatcgatg 28222931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 3805544 - 3805691
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||| ||||||||||||| ||| ||| | ||||||||||||||||||||  ||||||| ||| | || |||||||| |||||||||||   |||||    
T  3805544 tcatcaagaattttgttgaactccgtaagttgctccatgatggcctttgactctgccatcttgaatgattacagttgttgctttaggaattgccaatgag 3805643  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||| ||||||||| ||||  |||| ||| ||| |||||||||||    
T  3805644 ccaaagatttggtcataaacaacaactctaacgttgaccacatcgatg 3805691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 50078199 - 50078430
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| ||| ||| | |||||||||||||||||||| |  ||||| ||| ||||||||||||| ||||||| |||   ||||    
T  50078199 atcaccaatgattttgttgaactccgtaagttgctccatgatggcctttgactctataatcttgaatgagtaaagttgttgctttaggacttgccgatga 50078298  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||| |||| || |||||||||||  | || ||||||| |||||| |||| | || |   |||||| |  || || |||||||||||||||  ||||||||    
T  50078299 gcccaagattttgtcatatacaaatattcaaactttgaccacattgatgccgcagttgtttccttcgctacttctctcgaaactttattcccgaggcaca 50078398  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||  |||||| | | |||||||||||||    
T  50078399 agacaatggcactcttggccttgtccaccatc 50078430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 133
Target Start/End: Complemental strand, 16429822 - 16429700
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||| |||||||||||| |   ||| | |||||||||||||||||||| |||||||| ||| ||||||||||||  ||||||||||    ||||    
T  16429822 atcatcaagggttttgttgaactccacaagttgctccatgatggcctttgactctaccatcttgaatgagtaaagttgttactttaggaatttctgatga 16429723  T
Q  111 gccaaagacttggtcatatacaa 133  Q
    ||||||||||| |||||||||||    
T  16429722 gccaaagactttgtcatatacaa 16429700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 25250686 - 25250928
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||| |||||||||||||| ||| |||   |||||||||||||||||||| |||||||| ||| |||| |||||||| ||||||||||    | ||    
T  25250686 atcatcaatgattttgttgaactccgtaagtttctccatgatggcctttgactctaccatcttgaatgagtagagttgttgctttaggaattaccgaaga 25250785  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| | |||||||||  | |  ||||||  ||||||||||  | |  |   ||||||||  || || ||| |||||||||||||||||||||    
T  25250786 gccaaagactttgccatatacaaatatttgaactttaaccacatcgataccgcggttgtttcctttgctacttctctcaaaactttattcttgaggcaca 25250885  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||||||  |||||  | | |||| |||||||| | ||||||||    
T  25250886 agacaatggcacttctggccttgcccaccatctcggtcttctc 25250928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 16456479 - 16456388
Alignment:
Q  56 ctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttg 147  Q
    ||||||||| | |||||| ||| |||| |||||||| ||||||| |||  |||||||||||| |||||||||||||||||||||||||||||    
T  16456479 ctttgactctatcatcttgaatgagtagagttgttgctttaggatttgcctatgagccaaagtcttggtcatatacaatgactccaactttg 16456388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 13127141 - 13127393
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||| |||| | | ||| | | |||||||  |||||||||| |||| || ||| |||| |||||||  |||| ||||||   |||||    
T  13127141 tcatcaaggattttgttaaactccataagttgctacatgatgatctttgactccgccatattgaatgagtatagttgtttctttaagaattgtcgatgag 13127240  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||| || ||||||||||| |||||||||||||   ||||||||| | |  | |||| ||| |  ||||| ||| ||| ||||| |  |||||||||    
T  13127241 ccaaagaatttgtcatatacaaagactccaactttgaagacatcgatgtcgcggttagttacttcgctacatctctcaaaattttatcccagaggcacaa 13127340  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    || ||  |||||| | |  |||||||||||| |||||||||| |||| |||||    
T  13127341 gaaaatggcactcctggctttgtccaccatctcagtcttctccgcttgtgaca 13127393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 28997660 - 28997902
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| | | || |||| |||||| ||||||||||  |||||||  ||| ||||||||||||| ||||||| |||   ||||    
T  28997660 atcaccaatgattttgttgaactccataagcagttgcatgatagcctttgactttaccatctcgaatgagtaaagttgttgctttaggacttgccgatga 28997759  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    | |||||| || |||||||||||  | |  ||||||| |||||| |||| |    |    |||||||  || || ||||||||||||||| |||||||||    
T  28997760 gtcaaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgctacttctctcgaaactttattcctgaggcaca 28997859  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||| ||  |||||| |   ||||||||||||| ||||||||||    
T  28997860 agataatggcactcctgaccttgtccaccatctcagtcttctc 28997902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 29003376 - 29003618
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| | | || |||| |||||| ||||||||||  |||||||  ||| ||||||||||||| ||||||| |||   ||||    
T  29003376 atcaccaatgattttgttgaactccataagcagttgcatgatagcctttgactttaccatctcgaatgagtaaagttgttgctttaggacttgccgatga 29003475  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    | |||||| || |||||||||||  | |  ||||||| |||||| |||| |    |    |||||||  || || ||||||||||||||| |||||||||    
T  29003476 gtcaaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgctacttctctcgaaactttattcctgaggcaca 29003575  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    ||| ||  |||||| |   ||||||||||||| ||||||||||    
T  29003576 agataatggcactcctgaccttgtccaccatctcagtcttctc 29003618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 31424439 - 31424547
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||||||||||||||| |||||||| ||| ||||||  ||||| ||||| |||||   ||||    
T  31424439 atcaccaatgattttgttgaactccacaagtagatccatgatggcctttgactctaccatcttgaatgagtaaatatgttgctttagaaattgttgatga 31424538  T
Q  111 gccaaagac 119  Q
    |||||||||    
T  31424539 gccaaagac 31424547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 166
Target Start/End: Original strand, 33094233 - 33094388
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||| |||||||||||||||||| || | | | |   ||||||  ||||||||||||||  ||||| |||| |||| |||||| |||||||  ||||||    
T  33094233 atcattaaggattttgttgaacttagtcaattgctttgtgatggattttgactccaccattctaaatgagtagagttattgtttgaggaattacatatga 33094332  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacatt 166  Q
     | ||  ||||||||||||| || ||||||||| ||| |||||||| || ||||||    
T  33094333 cctaacaacttggtcatatataaagactccaaccttgaccacatcgttgtcacatt 33094388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 41397646 - 41397745
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||| |||||| ||| | || |||||||| || | || |||  ||||||||||||| || ||||||||||||||||||||||| | |||||||||||    
T  41397646 gactccatcatcttgaatgaatagagttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatg 41397745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 47099498 - 47099399
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  |||||||||| || || ||||| || |||||||||||||| | |||||||||||    
T  47099498 gactccaccatcttgaatgaatagagttgttgtttcacgagttgcctatgagccaacgatttcgtcatgtaaaatgactccaacttagcccacatcgatg 47099399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 159
Target Start/End: Complemental strand, 19359515 - 19359419
Alignment:
Q  63 tccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||| ||| ||| | || ||||||||||| | || |||  ||||||||||||| || ||||| |||||||||| |||||| | |||||||||||    
T  19359515 tccaccaccttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatgtacaatgacttcaacttagcccacatcgatg 19359419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 4681757 - 4681831
Alignment:
Q  65 caccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactc 139  Q
    ||||||||||||| | ||||||||||||||||    |||  |||||||||| || ||| ||||||||||||||||    
T  4681757 caccatcttaaatgaataaagttgttgttttaaagtttggttatgagccaacgaattgatcatatacaatgactc 4681831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 13784790 - 13784874
Alignment:
Q  132 aatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaa 216  Q
    |||||||||||||||| |||||||||||   |  || ||||||| | |||||||||| ||| |||||   |||||||||||||||    
T  13784790 aatgactccaactttgaccacatcgatgttgcggtaggttccttcgcgacatccctcaaaattttatctctgaggcacaagacaa 13784874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 9e-40; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 21520100 - 21520247
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||| ||| ||||||||||| ||||| |||| |||||||| |||||||||||   |||||    
T  21520100 tcatcaaggattttgttgaactccgtaagttgctccatgatggcatttaactccaccatcctaaatgagtagagttgttgctttaggaattgccgatgag 21520199  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||    
T  21520200 ccaaagactttgtcatatacaaagattccaactttggccacatcgatg 21520247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 36560547 - 36560799
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  36560547 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 36560646  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  36560647 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 36560746  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  36560747 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 36560799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 22405336 - 22405577
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||||| ||| |||| | | |||| |||||||||||   || ||    
T  22405336 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactccaccatcttgaatgagtagaatcgttgctttaggaattgctgataag 22405435  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |  ||||||| |  || || ||| ||||||||| |  |||||||||    
T  22405436 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttggttccttcgctacttctctcaaaactttatccccgaggcacaa 22405535  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctc 253  Q
    |||||  |||||| | | ||||||||||| | | ||||||||    
T  22405536 gacaatggcactcctagccttgtccaccagctcggtcttctc 22405577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 35217376 - 35217606
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  35217376 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 35217475  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| |||||||| || || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  35217476 ccaaagactttgtcatatataaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 35217575  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    |||||  |||||| | | |||||||||||||    
T  35217576 gacaacggcactcctggccttgtccaccatc 35217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 264
Target Start/End: Original strand, 19503742 - 19503994
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| | |||| | ||| |||| |||  ||| |||||||||||   |||||    
T  19503742 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctatcatcctgaatgagtagagtcattgctttaggaattgccgatgag 19503841  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
     ||||||||| ||||||||||| || |||||||||| ||||||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  19503842 gcaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 19503941  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | |||||||| |||| |||||    
T  19503942 gacaatggcactcctggccttgtccaccatctcggtcttctccgcttgtgaca 19503994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 264
Target Start/End: Original strand, 6263570 - 6263812
Alignment:
Q  22 ttttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagactt 121  Q
    |||||||||||| | | ||| | |||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| |||   |||||||||||||||    
T  6263570 ttttgttgaactccataagttgctccatgatggcctttgactctaccatcttgaatgagtaaagttgttgctttaggacttgccgatgagccaaagactt 6263669  T
Q  122 ggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagca 221  Q
     |||||||||||  |    ||||||| ||||||||||| | |  |   |||||| |   | || |||||||||||||||  ||||||||||||||  |||    
T  6263670 tgtcatatacaaatatctgaactttgaccacatcgatgccgcggttgtttccttcgttgcttctctcgaaactttattcccgaggcacaagacaatggca 6263769  T
Q  222 ctcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||| | | ||||||||||||| | ||||||||||||| |||||    
T  6263770 ctcctagccttgtccaccatctcggtcttctctgcttgtgaca 6263812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 28569834 - 28569966
Alignment:
Q  15 tcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagcca 114  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||||| ||| ||||||||| |||||||||||  ||   |||||| |    
T  28569834 tcaaggattttgttgaactccgtaagttgatccatgatggcctttgactctaccatcttgaatgagtaaagtttttgttttaggatctgtcgatgagcta 28569933  T
Q  115 aagacttggtcatatacaatgactccaactttg 147  Q
    |||| |||||||||||| | |||||||||||||    
T  28569934 aagatttggtcatataccacgactccaactttg 28569966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 42019252 - 42019471
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||| |||||||||||||||| ||||||   |||| |||| |||||||||||||||||||||||   |||||||| ||||||||||||||  ||| ||    
T  42019252 tcatcatggattttgttgaactttgttagttactccacgatgacctttgactccaccatcttaaatgtataaagttggtgttttaggaattgcctataag 42019351  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||||||||||           |||||||| ||||||||||| ||   || ||||||| | |||||||||| ||||||||| |  |||||||||    
T  42019352 ccaaagacttggtcata-----------caactttgaccacatcgatgtcatcgtaggttccttcgcgacatccctcaaaactttatcccagaggcacaa 42019440  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||| | |||| |||| |||| | ||||||    
T  42019441 gacaataacacttattgccttggcaaccatc 42019471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 19348635 - 19348783
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| |||| |||||||| || | || |||  |||||    
T  19348635 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgagtagagttgttgcttcaagagttgtctatga 19348734  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  19348735 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 19348783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 34574612 - 34574711
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||| |||||||||| |||| ||||||||  || |||||||  |||||||||||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  34574612 gactccaacatcttaaatgagtagagttgttgcatttggaattgcctatgagccaaaggctttgtcatatacaaagactccaactttgaccacatcgatg 34574711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Complemental strand, 23079147 - 23079048
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  ||||||||||||| || ||||| ||||||||||||||||| | |||||||||||    
T  23079147 gactccaccatcttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatgtacaatgactccaacttagcccacatcgatg 23079048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 25403057 - 25403156
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  ||||||||||||| || ||||| ||||||||||||||||| | |||||||||||    
T  25403057 gactccaccatcttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatgtacaatgactccaacttagcccacatcgatg 25403156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 10446120 - 10446023
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcga 157  Q
    |||||||||||||| ||| | || ||||||||||| | || ||   |||||||||| || || ||||| ||||||||||||||||| | |||||||||    
T  10446120 gactccaccatcttgaatgaatagagttgttgtttcaagagtttcctatgagccaacgatttcgtcatgtacaatgactccaacttagcccacatcga 10446023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 28570034 - 28570070
Alignment:
Q  228 gtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28570034 gtcttgtccaccatctcagtcttctctgcttatgaca 28570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 7859308 - 7859362
Alignment:
Q  89 ttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaac 143  Q
    |||||||||||||||  | ||||||||||||||| || ||||||| |||||||||    
T  7859308 ttgttttaggaattgtctttgagccaaagacttgatcgtatacaacgactccaac 7859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 497 - 245
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| ||| |||| |||||||||||   |||||    
T  497 tcatcaaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagtcgttgctttaggaattgccgatgag 398  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||| ||| ||||||||||| || |||||||||| ||||||||||| |||  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  397 ccaaaggctttgtcatatacaaagattccaactttgcccacatcgatgccacggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 298  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  |||||| | | ||||||||||||| | ||||| || |||| |||||    
T  297 gacaatggcactcctggccttgtccaccatctcggtcttttccgcttgtgaca 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 242
Target Start/End: Original strand, 26297 - 26526
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    |||||||||||||| ||||||| ||  |||   |||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||||   |||||    
T  26297 tcatcaaggatttt-ttgaactccgcaagtttctccatgatggcctttgactctaccatcttgaatgagtaaagttgttgcttttggaattgccgatgag 26395  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    ||||||||||  ||||||||||  | || ||||||| ||||||||||| | || |  |||||||||  || |||||| |||||| ||||| |||||||||    
T  26396 ccaaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgctacttccctcaaaacttaattctcgaggcacaa 26495  T
Q  212 gacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||| |||| |||| | |||||||||||||    
T  26496 gacaatagcaatcatggccttgtccaccatc 26526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 115409 - 115168
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||||||||||||||||||||||  || | | | ||||| | || |||||| ||||||||||| ||| |||| |||||||| || ||||||||  |||||    
T  115409 atcatcaaggattttgttgaactctgtcaattgctccatcacggtctttgaatccaccatcttgaatgagtagagttgttgcttaaggaattgtctatga 115310  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||| | |  |  ||||||| | |||||| ||| ||||||| |    ||||||||    
T  115309 gccaaagacttggtcatatacaatgactacaactttgaccacgtcgatgccgcggttggttccttcgcgacatcgctcaaaactttgtcaccgaggcaca 115210  T
Q  211 agacaaaagcactcattgtcttgtccaccatcacagtcttct 252  Q
    ||||||  |||||| | | ||||||||||||| |||||||||    
T  115209 agacaatggcactcctagccttgtccaccatctcagtcttct 115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 22999 - 22747
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||| |||||||||||||||| ||| ||| | |||||||||||||||||||| |||||| | ||| |||| |||||||| |||||||||||   |||||    
T  22999 tcatctaggattttgttgaactccgtaagttgctccatgatggcctttgactctaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 22900  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
    |||||||||| ||||||||||| || |||||||||| ||| ||||||| | |  |   ||||||||  || || ||| ||||||||| |  |||||||||    
T  22899 ccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctacttctctcaaaactttatccccgaggcacaa 22800  T
Q  212 gacaaaagcactcattgtcttgtccaccatcacagtcttctctgcttatgaca 264  Q
    |||||  ||||||   | ||||||||||||| | |||||||| |||| |||||    
T  22799 gacaacggcactccgggccttgtccaccatctcggtcttctccgcttgtgaca 22747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 34423 - 34276
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||| |||| ||| ||| | ||||||||||||||||||||||||||| | ||| |||  |||||||| |||||||||||   |||||    
T  34423 tcatcaaggattttgtttaactccgtgagttgctccatgatggcctttgactccaccatcctgaatgagtggagttgttgctttaggaattgccgatgag 34324  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||||| ||||||||||| || |||||||||| |||||||||||    
T  34323 ccaaagactttgtcatatacaaagattccaactttgcccacatcgatg 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 241
Target Start/End: Original strand, 72923 - 73152
Alignment:
Q  12 tcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgag 111  Q
    ||||||||||||||||||||||  || ||| | |||||||||| |||||||||||||||| | ||| |||| |||||||| |||||||||||   |||||    
T  72923 tcatcaaggattttgttgaactctgtaagttgctccatgatggtctttgactccaccatcctgaatgagtagagttgttgctttaggaattgccgatgag 73022  T
Q  112 ccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaa 211  Q
     |||||| || ||||||||||| || |||||||||| |||||| |||| | || |  |||||||||  || || ||| |||||||||    |||||||||    
T  73023 tcaaagattttgtcatatacaaagattccaactttgcccacatagatgccgcagttcgttcctttgctacttctctcaaaactttatctccgaggcacaa 73122  T
Q  212 gacaaaagcactcattgtcttgtccaccat 241  Q
    |||||  |||||| | | ||||||||||||    
T  73123 gacaatggcactcctggccttgtccaccat 73152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 264
Target Start/End: Original strand, 26822 - 27031
Alignment:
Q  55 cctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacat 154  Q
    ||||||||||||||||||||||  |||| || ||| |||||||||||||  ||||||||||||| || |||| |||||| ||||||||||||| |||||     
T  26822 cctttgactccaccatcttaaacgagtagagatgtagttttaggaattgtgtatgagccaaagaatttgtcacatacaacgactccaactttgaccacaa 26921  T
Q  155 cgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcacaagacaaaagcactcattgtcttgtccaccatcacagtcttctct 254  Q
     |||| |||| || |||||| ||  ||||||||  |||||||||   |  |||||||||||| | || |  ||| ||||||||||||| | ||||||||     
T  26922 tgatgccacaatatgttcctctgttacatcccttaaaactttatcactagggcacaagacaataacatttcttgccttgtccaccatctcggtcttctcc 27021  T
Q  255 gcttatgaca 264  Q
    |||| |||||    
T  27022 gcttctgaca 27031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 80740 - 80509
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||     |||    
T  80740 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccgttga 80641  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatggcacattaagttcctttgagacatccctcgaaactttattcttgaggcaca 210  Q
    ||||||||||| |||||||||||  | || ||||||| ||||||||||||| |  |   ||||||||  || || ||| |||||||||||  ||||||||    
T  80640 gccaaagactttgtcatatacaaatattcgaactttgaccacatcgatggcgcggttgtttcctttgctacttctctctaaactttattcccgaggcaca 80541  T
Q  211 agacaaaagcactcattgtcttgtccaccatc 242  Q
    ||||||   ||||||| | |||||||||||||    
T  80540 agacaatgacactcatggccttgtccaccatc 80509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 606 - 458
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| | ||||||||||| || | || |||  |||||    
T  606 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgaataaagttgttgcttcaagagttgcctatga 507  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  506 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 50892 - 50744
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   ||||| |||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| |||   ||||    
T  50892 atcaccaatgattttgttgaactccacaagtagctccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggacttgccgatga 50793  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || | ||||| |||||||||||    
T  50792 gccaaagactttgtcatatacaaatattcgatctttgaccacatcgatg 50744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 15038 - 14890
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||| ||| | || |||||||| || | || |||  |||||    
T  15038 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttgaatgaatagagttgttgcttcaagagttgcctatga 14939  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||||    
T  14938 gccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 14890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 149684 - 149536
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    ||||||||| || ||||| |||| ||||||| | |||  ||| |  || |||||||||||||||||| | || |||||||| || | || |||  |||||    
T  149684 atcatcaagaatcttgttaaactccgttagttgctccgagatcgatttagactccaccatcttaaatgaatagagttgttgcttcaagagttgcctatga 149585  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    |||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  149584 gccaaagatttcgtcatatacaatgactccaactttgcccacattgatg 149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 857 - 1005
Alignment:
Q  11 atcatcaaggattttgttgaacttcgttagtagttccatgatggcctttgactccaccatcttaaataagtaaagttgttgttttaggaattgaatatga 110  Q
    |||| ||| |||||||||||||| |   |||||  ||||||| ||||||||||  |||||||| ||| ||||||||||||| ||||||| ||    || |    
T  857 atcaccaatgattttgttgaactccacaagtagcaccatgatagcctttgactttaccatcttgaatgagtaaagttgttgctttaggactttccgataa 956  T
Q  111 gccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||| |||||||||||  | || || |||| |||||||||||    
T  957 gccaaagactttgtcatatacaaaaattcaaaatttgaccacatcgatg 1005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1991 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1991
Description:

Target: scaffold1991; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 1101 - 1022
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactc 139  Q
    |||||||||||||| ||| | || ||||||||||| | || |||  ||||||||||||| || |||||||||||||||||    
T  1101 gactccaccatcttgaatgaatagagttgttgtttcaagagttgcctatgagccaaagatttcgtcatatacaatgactc 1022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 18578 - 18525
Alignment:
Q  106 tatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||||||| || ||||| ||||||||||||||||| | |||||||||||    
T  18578 tatgagccaaagatttcgtcatgtacaatgactccaacttagcccacatcgatg 18525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 1914 - 2011
Alignment:
Q  60 gactccaccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcga 157  Q
    ||||||||||| || ||| | || ||||||||||| | || |||  |||||||||| || || ||||| ||||||||||||||||| | |||||||||    
T  1914 gactccaccattttgaatgaatagagttgttgtttcaagagttgcctatgagccaacgatttcgtcatgtacaatgactccaacttagcccacatcga 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 159
Target Start/End: Complemental strand, 3867 - 3773
Alignment:
Q  65 caccatcttaaataagtaaagttgttgttttaggaattgaatatgagccaaagacttggtcatatacaatgactccaactttggccacatcgatg 159  Q
    ||||||||| ||||| || ||||||||||| | || |||  ||||||  ||||  || ||||| ||||||||||||||||| | |||||||||||    
T  3867 caccatcttgaataaatagagttgttgtttcaagagttgcctatgagtgaaagttttcgtcatgtacaatgactccaacttagcccacatcgatg 3773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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