View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2484_low_5 (Length: 391)

Name: NF2484_low_5
Description: NF2484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2484_low_5
NF2484_low_5
[»] scaffold0056 (1 HSPs)
scaffold0056 (11-370)||(61657-62016)
[»] chr8 (7 HSPs)
chr8 (261-337)||(26913608-26913684)
chr8 (13-72)||(2203498-2203557)
chr8 (22-72)||(968368-968418)
chr8 (22-72)||(5264550-5264600)
chr8 (22-72)||(16852346-16852396)
chr8 (13-58)||(28783080-28783125)
chr8 (24-72)||(3624586-3624634)
[»] chr5 (4 HSPs)
chr5 (261-337)||(21212612-21212688)
chr5 (22-66)||(18596021-18596065)
chr5 (20-72)||(21549155-21549207)
chr5 (13-61)||(30883209-30883257)
[»] chr4 (7 HSPs)
chr4 (20-72)||(13265126-13265178)
chr4 (21-61)||(13901759-13901799)
chr4 (13-72)||(37109362-37109421)
chr4 (22-72)||(46545717-46545767)
chr4 (21-58)||(4688583-4688620)
chr4 (24-72)||(1730511-1730559)
chr4 (22-58)||(17618301-17618337)
[»] chr7 (6 HSPs)
chr7 (20-72)||(45976941-45976993)
chr7 (20-67)||(11720978-11721025)
chr7 (13-72)||(21877814-21877873)
chr7 (13-72)||(26459421-26459480)
chr7 (22-72)||(25021355-25021405)
chr7 (31-72)||(26199515-26199556)
[»] chr2 (3 HSPs)
chr2 (13-72)||(12994387-12994446)
chr2 (13-72)||(42327406-42327465)
chr2 (35-67)||(29964826-29964858)
[»] chr6 (2 HSPs)
chr6 (25-67)||(3779350-3779392)
chr6 (22-72)||(12188323-12188373)
[»] chr3 (1 HSPs)
chr3 (22-68)||(32651458-32651504)
[»] chr1 (5 HSPs)
chr1 (22-72)||(9165215-9165265)
chr1 (38-72)||(14787372-14787406)
chr1 (22-72)||(40257405-40257455)
chr1 (22-71)||(8177202-8177251)
chr1 (24-72)||(21694452-21694500)


Alignment Details
Target: scaffold0056 (Bit Score: 300; Significance: 1e-168; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 11 - 370
Target Start/End: Original strand, 61657 - 62016
Alignment:
Q  11 cagagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaaggcggttacaactttactagttcaattaaatttcgaagg 110  Q
    |||||||  |||||||||||| | ||||||||| ||||||||||||||||| ||||| || |  ||||||||||||||||||||||||||||||||||||    
T  61657 cagagactttaaggaggaccatactcccaggtcccaagccaataccactagatcaacccatgtgggttacaactttactagttcaattaaatttcgaagg 61756  T
Q  111 aaaaagtccaatttaaattattaaacaaagtaaattcaaactgctcttattatattgtattgtatctaacatgactatatttgtcataatctttatttaa 210  Q
    |||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  61757 aaaaagtccagttaaaattattaaacaacgtaaattcaaactgctcttattatattgtattgtatctaacatgactatatttgccataatctttatttaa 61856  T
Q  211 ttttccatcccaccatgaaagcccaatacattttattttattatcccttgttttccatcctcatgacatcaatgtgtgattttccttcaagcttgcgtga 310  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61857 ttttccatcccaccatgaaagcccaatacatttttttttattatcccttgttttccatcctcatgacatcaatgtgtgattttccttcaagcttgcgtga 61956  T
Q  311 gaaatatgctttaaagaaatcttccactccaacattattgaacactgctgggctttcagg 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61957 gaaatatgctttaaagaaatcttccactccaacattattgaacactgctgggctttcagg 62016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 337
Target Start/End: Original strand, 26913608 - 26913684
Alignment:
Q  261 ttttccatcctcatgacatcaatgtgtgattttccttcaagcttgcgtgagaaatatgctttaaagaaatcttccac 337  Q
    |||| |||||||||| |||||||||   ||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  26913608 tttttcatcctcatgtcatcaatgtacaattttccttcaagcttgcgtgagaaatatcctttgaagaaatcttccac 26913684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 2203557 - 2203498
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| | ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  2203557 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 2203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 968418 - 968368
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| ||||||||| |||||||||||||| ||| |||||||||    
T  968418 aggaggagcacactcccaggtcccaagccaataccaccaggccaactcaag 968368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 5264600 - 5264550
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||||||||||||  |||||||||||||||||| |||| ||||    
T  5264600 aggaggagcacattcccaggttccaagccaataccactaggccaacccaag 5264550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 16852396 - 16852346
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  16852396 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 16852346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 28783125 - 28783080
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccac 58  Q
    |||||| | ||||||| |||| ||||||||||||||||||||||||    
T  28783125 gagaccttgaggaggagcacactcccaggtctcaagccaataccac 28783080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 3624634 - 3624586
Alignment:
Q  24 gaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  3624634 gaggagcacactcccaggtcccaagccaataccactaggccaacccaag 3624586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 21212688 - 21212612
Alignment:
Q  261 ttttccatcctcatgacatcaatgtgtgattttccttcaagcttgcgtgagaaatatgctttaaagaaatcttccac 337  Q
    |||| |||||||||| |||||||||    |||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  21212688 tttttcatcctcatgtcatcaatgtacatttttccttcaagctggcgtgagaaatatcctttgaagaaatcttccac 21212612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 18596021 - 18596065
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaa 66  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||||    
T  18596021 aggaggagcacattcccaggtcacaagccaataccactagatcaa 18596065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 21549155 - 21549207
Alignment:
Q  20 taaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  21549155 taaggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 21549207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 30883209 - 30883257
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactag 61  Q
    |||||| | ||||||| |||| ||||||||| |||||||||||||||||    
T  30883209 gagaccttgaggaggagcacactcccaggtcccaagccaataccactag 30883257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 13265126 - 13265178
Alignment:
Q  20 taaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||||| |||||||||||||| |||||||||||| ||||| |||||||||    
T  13265126 taaggaggagcacattcccaggtcccaagccaatacctctaggccaactcaag 13265178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 13901799 - 13901759
Alignment:
Q  21 aaggaggaccacattcccaggtctcaagccaataccactag 61  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  13901799 aaggaggaacacactcccaggtctcaagccaataccactag 13901759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 37109362 - 37109421
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| | ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  37109362 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 37109421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 46545767 - 46545717
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| || ||||||||||||||||||||||||| |||| ||||    
T  46545767 aggaggagcacactctcaggtctcaagccaataccactaggccaacccaag 46545717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 4688620 - 4688583
Alignment:
Q  21 aaggaggaccacattcccaggtctcaagccaataccac 58  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  4688620 aaggaggatcacattcccaggtcccaagccaataccac 4688583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 1730511 - 1730559
Alignment:
Q  24 gaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||| |||| || |||||| ||||||||||||||||||||||| ||||    
T  1730511 gaggagcacactctcaggtcccaagccaataccactaggtcaacccaag 1730559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 17618337 - 17618301
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccac 58  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  17618337 aggaggagcacactcccaggtctcaagccaataccac 17618301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 45976941 - 45976993
Alignment:
Q  20 taaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  45976941 taaggaggagcacactcccaggtcacaagccaataccactaggccaacccaag 45976993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 11720978 - 11721025
Alignment:
Q  20 taaggaggaccacattcccaggtctcaagccaataccactaggtcaac 67  Q
    ||||||||| |||||||||||||| |||||||||||||| ||| ||||    
T  11720978 taaggaggagcacattcccaggtcccaagccaataccaccaggccaac 11721025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 21877873 - 21877814
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| ||||||||| |||  ||||||||| |||| ||||||||||||| |||||||||    
T  21877873 gagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 26459421 - 26459480
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| | ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  26459421 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 26459480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 25021355 - 25021405
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 25021405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 26199556 - 26199515
Alignment:
Q  31 acattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| |||||| |||||||||||||||||| |||||||||    
T  26199556 acattctcaggtcccaagccaataccactaggccaactcaag 26199515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000009; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 12994387 - 12994446
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| ||||||||| |||| ||||||||| |||| ||||||||||||  |||||||||    
T  12994387 gagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaag 12994446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 42327406 - 42327465
Alignment:
Q  13 gagaccgtaaggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    |||||| | ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  42327406 gagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 42327465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 29964858 - 29964826
Alignment:
Q  35 tcccaggtctcaagccaataccactaggtcaac 67  Q
    |||||||| ||||||||||||||||||||||||    
T  29964858 tcccaggtttcaagccaataccactaggtcaac 29964826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 3779392 - 3779350
Alignment:
Q  25 aggaccacattcccaggtctcaagccaataccactaggtcaac 67  Q
    |||| |||| ||||| |||||||||||||||||||||||||||    
T  3779392 aggagcacactcccaagtctcaagccaataccactaggtcaac 3779350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 12188323 - 12188373
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  12188323 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 12188373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 32651458 - 32651504
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaact 68  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||||    
T  32651458 aggaggagcacactcccaggtcccaagccaataccactaggccaact 32651504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 9165215 - 9165265
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| ||||||||| |||||||||||||||||| |||| ||||    
T  9165215 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaag 9165265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 14787372 - 14787406
Alignment:
Q  38 caggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||||||| |||||||||||||||||||||||    
T  14787372 caggtctcaagtcaataccactaggtcaactcaag 14787406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 40257455 - 40257405
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||||| |||| |||||||||||||||||||||||| ||| |||| ||||    
T  40257455 aggaggagcacactcccaggtctcaagccaataccaccaggccaacccaag 40257405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 8177202 - 8177251
Alignment:
Q  22 aggaggaccacattcccaggtctcaagccaataccactaggtcaactcaa 71  Q
    ||||||| |||| |||||| || |||||||||||||||||| ||||||||    
T  8177202 aggaggagcacactcccagatcccaagccaataccactaggccaactcaa 8177251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 21694500 - 21694452
Alignment:
Q  24 gaggaccacattcccaggtctcaagccaataccactaggtcaactcaag 72  Q
    ||||| |||| ||||| |||||||||||||||||| |||||||| ||||    
T  21694500 gaggagcacactcccaagtctcaagccaataccaccaggtcaacccaag 21694452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University