View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2484_low_7 (Length: 290)
Name: NF2484_low_7
Description: NF2484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2484_low_7 |
 |  |
|
| [»] scaffold0349 (2 HSPs) |
 |  |  |
|
| [»] scaffold0038 (3 HSPs) |
 |  |  |
|
| [»] scaffold0277 (1 HSPs) |
 |  |  |
|
| [»] scaffold0019 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 49)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 6 - 272
Target Start/End: Original strand, 2184985 - 2185251
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatccta |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2184985 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatccta |
2185084 |
T |
 |
| Q |
106 |
gtcatgtacgacatcagactgggagcatcggtgaagaactggcaaagcatcaagagaagttccaaaagaatatgaaaaggctgcgggaatggaagatagc |
205 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2185085 |
atcatgtacgaaatcagactgggagcatcggtgaagaactggcaaagcatcaagagaagttccaaaagaatatgaaaaggctgcgggaatggaagaaagc |
2185184 |
T |
 |
| Q |
206 |
tcttaaacaagcagctgatctttccggctaccacttcgatcttgctgggtacagcacttcattcttt |
272 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2185185 |
tcttaaacaagcagctgatctttccggctaccacttcgatcttgctgggtacaccacttcattcttt |
2185251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 6 - 272
Target Start/End: Original strand, 2184375 - 2184641
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatccta |
105 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||| | | || | ||||| |
|
|
| T |
2184375 |
gcttcttcttcattttgtttggacgaacttgtccacatcattcgttactccaagtcaaagggacgcctggttctaccagttttctatgatattgctccta |
2184474 |
T |
 |
| Q |
106 |
gtcatgtacgacatcagactgggagcatcggtgaagaactggcaaagcatcaagagaagttccaaaagaatatgaaaaggctgcgggaatggaagatagc |
205 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
2184475 |
ctcatgtacgaaagcagactgggagcatcggtgaagaacttgcgaagcatcaagagaagttccaaaagaatatggaaaggctgcaggaatggaagatggc |
2184574 |
T |
 |
| Q |
206 |
tcttaaacaagcagctgatctttccggctaccacttcgatcttgctgggtacagcacttcattcttt |
272 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||| ||||||| |||||| ||||||||||||| |
|
|
| T |
2184575 |
tcttaaagaagcagctgagctttccggccaccacttcaatcttgcggggtactccacttcattcttt |
2184641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27677711 - 27677630
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
27677711 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttct |
27677630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 27679036 - 27679117
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
27679036 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttct |
27679117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 27706499 - 27706420
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagtttt |
88 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||| |||||||| ||||| |
|
|
| T |
27706499 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgtttt |
27706420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27593117 - 27593036
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||| ||||||| ||||| |||| ||||||| ||||| ||| |||| ||||||| |
|
|
| T |
27593117 |
tcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttttgcctgttttct |
27593036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 26949748 - 26949832
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| | || |||| ||| || |||| |||||||||||||||| |
|
|
| T |
26949748 |
gcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttct |
26949832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26975139 - 26975191
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaa |
58 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| |
|
|
| T |
26975139 |
gcttcttcttcattttgtttggacgaacttgtccacatcattcattgttccaa |
26975191 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 26342034 - 26341975
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||| ||||| |||| ||||| |
|
|
| T |
26342034 |
gcttcttcttcgttttgtttggacgaacttgtccacatcattcattgcttcaaggcaaag |
26341975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 26656079 - 26656137
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||| |
|
|
| T |
26656079 |
tcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaaggg |
26656137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 26762050 - 26762108
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||| |
|
|
| T |
26762050 |
tcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaaggg |
26762108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 26848751 - 26848800
Alignment:
| Q |
10 |
cttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
26848751 |
cttcttcgttttgtttggacgaacttgtccacatcattcattgctccaag |
26848800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Original strand, 27214508 - 27214557
Alignment:
| Q |
10 |
cttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || |||||||||| |
|
|
| T |
27214508 |
cttcttcattttgtttggacgaacttgtccacatcactcattgctccaag |
27214557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 27234720 - 27234671
Alignment:
| Q |
10 |
cttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || |||||||||| |
|
|
| T |
27234720 |
cttcttcattttgtttggacgaacttgtccacatcactcattgctccaag |
27234671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 28227037 - 28227090
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||| |
|
|
| T |
28227037 |
gcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaag |
28227090 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25481832 - 25481888
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
25481832 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag |
25481888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25538630 - 25538686
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
25538630 |
tcttcttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaag |
25538686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 25579809 - 25579865
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
25579809 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag |
25579865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 26048935 - 26048991
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
26048935 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag |
26048991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 26070104 - 26070160
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
26070104 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag |
26070160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 26142955 - 26143011
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaag |
65 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||| |
|
|
| T |
26142955 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaag |
26143011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 26823930 - 26823970
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcg |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26823930 |
tcttcttcattttgtttggacgaacttgtccacatcattcg |
26823970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 28150025 - 28150085
Alignment:
| Q |
7 |
cttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || |||| |||| |||| ||||||| |
|
|
| T |
28150025 |
cttcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaaggg |
28150085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 28242891 - 28242975
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||| ||||||| ||| ||||| |||||| |
|
|
| T |
28242891 |
gcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttct |
28242975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 26056016 - 26056055
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26056016 |
tcttcttcattttgtttggacgaacttgtccacatcattc |
26056055 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 26075986 - 26076025
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26075986 |
tcttcttcattttgtttggacgaacttgtccacatcattc |
26076025 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 25071746 - 25071788
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
25071746 |
gcttcttcttcattttgtttagacgaacttgtccacatcattc |
25071788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 26646577 - 26646627
Alignment:
| Q |
17 |
attttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||| |||| ||||||| |
|
|
| T |
26646577 |
attttgtttggacgaacttgtccacatcattcattgctacaagacaaaggg |
26646627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 26752545 - 26752595
Alignment:
| Q |
17 |
attttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||| |||| ||||||| |
|
|
| T |
26752545 |
attttgtttggacgaacttgtccacatcattcattgctacaagacaaaggg |
26752595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 28181201 - 28181243
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
28181201 |
gcttcttcttcattttgcttggacgaacttgtccacatcattc |
28181243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 28297813 - 28297771
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
28297813 |
gcttcttcttcattttgcttggacgaacttgtccacatcattc |
28297771 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 28514260 - 28514302
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
28514260 |
gcttcttcttcattttgcttggacgaacttgtccacatcattc |
28514302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 27338162 - 27338041
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatcctagtc |
108 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||| ||| | ||||| |||| ||||||| | ||||||| || |
|
|
| T |
27338162 |
tcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactc |
27338063 |
T |
 |
| Q |
109 |
atgtacgacatcagactgggag |
130 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
27338062 |
acgtacgacatcagactgggag |
27338041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 27398902 - 27398781
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatcctagtc |
108 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||| ||| | ||||| |||| ||||||| | ||||||| || |
|
|
| T |
27398902 |
tcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactc |
27398803 |
T |
 |
| Q |
109 |
atgtacgacatcagactgggag |
130 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
27398802 |
acgtacgacatcagactgggag |
27398781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27611099 - 27611018
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || |||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
27611099 |
tcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct |
27611018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27698591 - 27698510
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||| |||| | || ||||||| |||| ||| |||| ||||||| |
|
|
| T |
27698591 |
tcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttct |
27698510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27718476 - 27718395
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || |||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
27718476 |
tcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct |
27718395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 28185453 - 28185494
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcatt |
47 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
28185453 |
gcttcttcttcattttgcttggacgaacttgtccacatcatt |
28185494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 28234651 - 28234692
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcatt |
47 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
28234651 |
gcttcttcttcattttgcttggacgaacttgtccacatcatt |
28234692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26635777 - 26635829
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaa |
58 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
26635777 |
gcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaa |
26635829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26741743 - 26741795
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaa |
58 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
26741743 |
gcttcttctttgttttgtttggatgaacttgtccacatcattcattgctccaa |
26741795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 26884253 - 26884284
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtcca |
40 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26884253 |
tcttcttcattttgtttggacgaacttgtcca |
26884284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 27724940 - 27724861
Alignment:
| Q |
11 |
ttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || |||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
27724940 |
ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct |
27724861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 40
Target Start/End: Original strand, 26937185 - 26937215
Alignment:
| Q |
10 |
cttcttcattttgtttggacgaacttgtcca |
40 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
26937185 |
cttcttcattttgtttggacgaacttgtcca |
26937215 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 26623068 - 26623105
Alignment:
| Q |
11 |
ttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
26623068 |
ttcttcattttgtttggatgaacttgtccacatcattc |
26623105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 26729046 - 26729083
Alignment:
| Q |
11 |
ttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
26729046 |
ttcttcattttgtttggatgaacttgtccacatcattc |
26729083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 27531294 - 27531249
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgct |
54 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||| || ||||| |
|
|
| T |
27531294 |
tcttcttcattttgtttggacgaacttgttcacatcactcattgct |
27531249 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 26959253 - 26959305
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaa |
58 |
Q |
| |
|
||||||||||| |||| |||||| ||||||||||| ||||||| || |||||| |
|
|
| T |
26959253 |
gcttcttcttcgttttatttggatgaacttgtccacatcattcatttctccaa |
26959305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 27665213 - 27665169
Alignment:
| Q |
10 |
cttcttcattttgtttggacgaacttgtccatatcattcgttgct |
54 |
Q |
| |
|
|||||||||||||||| || ||||||||||| ||||||| ||||| |
|
|
| T |
27665213 |
cttcttcattttgtttagatgaacttgtccacatcattcattgct |
27665169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 3518 - 3439
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagtttt |
88 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||| |||||||| ||||| |
|
|
| T |
3518 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgtttt |
3439 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 14451 - 14372
Alignment:
| Q |
11 |
ttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || |||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
14451 |
ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct |
14372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 28164446 - 28164365
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
28164446 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct |
28164365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 28127763 - 28127682
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
28127763 |
tcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct |
28127682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 268441 - 268402
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
268441 |
tcttcttcattttgtttggacgaacttgtccacatcattc |
268402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 29273867 - 29273809
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |
|
|
| T |
29273867 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaaggg |
29273809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18679651 - 18679593
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |
|
|
| T |
18679651 |
tcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaaggg |
18679593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 18731588 - 18731467
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatcctagtc |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| | |||| |||| ||||||| || | ||| |||| ||||||| | | | |||||||||| |
|
|
| T |
18731588 |
tcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtc |
18731489 |
T |
 |
| Q |
109 |
atgtacgacatcagactgggag |
130 |
Q |
| |
|
| |||||||||| | |||||| |
|
|
| T |
18731488 |
acatacgacatcaaagtgggag |
18731467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18655561 - 18655503
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||| |||| ||||||| |
|
|
| T |
18655561 |
tcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaaggg |
18655503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 18699484 - 18699363
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacatagatcctagtc |
108 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||| |||| |||| |||| || || | ||| |||| ||||||| | | ||||||||| || |
|
|
| T |
18699484 |
tcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactc |
18699385 |
T |
 |
| Q |
109 |
atgtacgacatcagactgggag |
130 |
Q |
| |
|
| |||||||||| | |||||| |
|
|
| T |
18699384 |
acatacgacatcaaagtgggag |
18699363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18724169 - 18724111
Alignment:
| Q |
9 |
tcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaaggg |
67 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||| | |||| |||| ||||||| |
|
|
| T |
18724169 |
tcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaaggg |
18724111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 5091054 - 5091001
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||||||| |||||||| || |||||||||||||| |||| ||||||||| |
|
|
| T |
5091054 |
gcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaag |
5091001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 27535 - 27588
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaag |
59 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| ||||| |||| |
|
|
| T |
27535 |
gcttcttcttcattttgcttggacgaacttgtccacatcattcattgcttcaag |
27588 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 43053 - 43137
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |||| |||| ||| ||||||| ||| ||||| |||||| |
|
|
| T |
43053 |
gcttcttcttcattttgcttggacgaacttgtccacatcattcactgctgcaagaaaaatggacgcctagttttgccaattttct |
43137 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 34812 - 34854
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
34812 |
gcttcttcttcattttgcttggacgaacttgtccacatcattc |
34854 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 17993784 - 17993732
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaa |
58 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| ||||||| |||||||| |
|
|
| T |
17993784 |
gcttcttcttcattttgtttagacgaacttgtccacatcattcaatgctccaa |
17993732 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3279775 - 3279823
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattcgttgct |
54 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
3279775 |
gcttcttctatattttgtttggacgaacttgtccacatcattcattgct |
3279823 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 4766 - 4687
Alignment:
| Q |
11 |
ttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttct |
90 |
Q |
| |
|
|||||| ||||||||||||||||||||||| || |||| |||| |||| ||||||| |||| ||| |||| ||||||| |
|
|
| T |
4766 |
ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttct |
4687 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 58382 - 58340
Alignment:
| Q |
6 |
gcttcttcttcattttgtttggacgaacttgtccatatcattc |
48 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
58382 |
gcttcttcttcattttgcttgaacgaacttgtccacatcattc |
58340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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