View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2485_high_10 (Length: 458)
Name: NF2485_high_10
Description: NF2485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2485_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 13 - 444
Target Start/End: Original strand, 11601526 - 11601957
Alignment:
| Q |
13 |
aaaatatttaccgagaccaaataataaaatacatattataaaaagttctaatatatgtccttatttattcaatagatgactgttatgacacatgttaaca |
112 |
Q |
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| T |
11601526 |
aaaatatttaccgagaccaaataataaaatacatattatgaaaaatgctaatatatgtccttatttattcaatagatgactgttatgacacatattaaca |
11601625 |
T |
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| Q |
113 |
agacactgacccaaagtaccaaatttatatacgatccaaaagtaaaattaattaatcaactatttttatgcatattaattgcctaaactaattgtatcta |
212 |
Q |
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| T |
11601626 |
agacactgatccaaagtaccaaatttatatacgatccaaaagtgaaattaattaatcaactatttttatgcatattaattgcctaaactaattgtatcta |
11601725 |
T |
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| Q |
213 |
tcttctctcatgtgtccattcttatcttaaatcgtactcaaagcaatttacaaaaaactttgataatgatttatgagaaatagatgatgatacatatatc |
312 |
Q |
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| T |
11601726 |
tcttctctcatgtgctcattcttatcttaaatcgtactcaaagcaatatacaaaaaactttgataatgatttatcagaaatagatgatgatacatatatc |
11601825 |
T |
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| Q |
313 |
ttctcgttgtgtcacagatgtactaccaatagggaagagagtcttggctgagcttgaaaggttgtgaagaaagaaaatagcatatgccaacctttgatag |
412 |
Q |
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|||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11601826 |
ttcttgttgtgtcatggatgtactaccaatagggaagagattcttggctgaacttgaaaggttgtgaagaaagaaaatagcatatgccaacctttgatag |
11601925 |
T |
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| Q |
413 |
atattttattgtgtggtgtaggatggtcatgg |
444 |
Q |
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| T |
11601926 |
atattttattgtgtggtgtaggatggtcatgg |
11601957 |
T |
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