View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2485_high_31 (Length: 291)
Name: NF2485_high_31
Description: NF2485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2485_high_31 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 49 - 285
Target Start/End: Original strand, 34091242 - 34091479
Alignment:
| Q |
49 |
taagtagaacaaacttcaagatctcatgacaa-ccatcagatcaaccccaactgggtaggcatgcaatacattaatttgtggaagaggatccaatgctta |
147 |
Q |
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| T |
34091242 |
taagtagaacaaactccaagatcacatgacaaaccatcagaccaaccccaattgggttggcatgcaatacattaatttgtggaagaggatccaatgctta |
34091341 |
T |
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| Q |
148 |
caaatacagaaaaaccaaaaccatatcgagtacaattgttgtgattgaaaaatatgtatctacataaatatttatatttagagtaagagtaactggtttt |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| |
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| T |
34091342 |
caaatacagaaaaaccaaaaccatatcgagtacaattgttgtgattgaaaaatatgtatctgcataaatatatatagttagagtaagagtaactggtttt |
34091441 |
T |
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| Q |
248 |
gtgggtttcttttagaaaatgcaaaagtaggacacatg |
285 |
Q |
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| T |
34091442 |
gtgggtttcttttagaaaatgcaaaagtaggacacatg |
34091479 |
T |
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