View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2485_high_36 (Length: 239)
Name: NF2485_high_36
Description: NF2485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2485_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43178799 - 43178661
Alignment:
| Q |
1 |
ttgaaaatttcaatttcgacaaaaaatacacccacattaata----cttgtatttttcaatccaattggttgatctgacggcgttggtttgaaaacttga |
96 |
Q |
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| T |
43178799 |
ttgaaaatttcaatttcgacaaaaaatacatccacattaattaatccttgtatttttcaatccacttggttgatccggtggcgttggtttgaaaacttgg |
43178700 |
T |
|
| Q |
97 |
agtggagtgtgctcatctcaagatcttcaattctcctca |
135 |
Q |
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| T |
43178699 |
agtggagtgtgctcatctcaagatcttcaattctcctca |
43178661 |
T |
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