View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2485_low_37 (Length: 250)
Name: NF2485_low_37
Description: NF2485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2485_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 38583926 - 38584167
Alignment:
| Q |
1 |
ctcaatcatcggtccatccactgcttcacacacacagaatagaagagtcttcaggtacttcttctgcaaggcatcgtaaacacctggaaaagaaatacaa |
100 |
Q |
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| T |
38583926 |
ctcaatcatcggtccatccactgcttcacacacacagaatagaagagtcttcaggtacttcttctgcaaggcatcgtaaacacctggaaaagaaatacaa |
38584025 |
T |
|
| Q |
101 |
taagtcaaatcaaaacaagcaattaaaactcattttctataagttcaatcagataatatagcttaaacgtgcctttctccatccaatcaatcagtctccg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38584026 |
taagtcaaatcaaaacaagcaattaaaactcattttctataagttcaatcagataatatagcttaaacgtgcctttctccatccaatcaatcagtctccg |
38584125 |
T |
|
| Q |
201 |
agactccgcatcgaccggtaaaagctttttgatcttcatctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
38584126 |
agactccgcatcgaccggtaaaagctttttgatcttcatctc |
38584167 |
T |
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