View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2485_low_39 (Length: 242)
Name: NF2485_low_39
Description: NF2485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2485_low_39 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 3067030 - 3067245
Alignment:
| Q |
18 |
aaaactggcaaactgcttaactaagtgtttatcatctaagtgttatgttcaagtcaactcttaaagtcaaccttagtcatacatactattatccttactc |
117 |
Q |
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| T |
3067030 |
aaaacaggcaaactgcttaactaagtgtttatcatataagtgttatgttcaagtcaactcttaaagtcaaccttagtcatacatactattatccttactc |
3067129 |
T |
|
| Q |
118 |
tcacatactgacatacaatgataccatatcatacataccataccaagttattcaaataagaaactatacgccatatcaacaatttgttagtacctaagac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3067130 |
tcacatactgacatacaatgataccatatcatacataccataccaagttattcaaataagaaactatacgccatatcaacaatttgttagtacctaagaa |
3067229 |
T |
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| Q |
218 |
caactcattttcttct |
233 |
Q |
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|||||||||||||||| |
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| T |
3067230 |
caactcattttcttct |
3067245 |
T |
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