View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2486_low_18 (Length: 226)
Name: NF2486_low_18
Description: NF2486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2486_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 21343753 - 21343951
Alignment:
| Q |
15 |
gaacagaacaagtcagtaatctaaatggatgtagttgtacagcgcccaatatcacttcactgcttacctcaaagtgagattttaatttattcctaaccaa |
114 |
Q |
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| T |
21343753 |
gaacagaacaagtcagttatctaaatggatgtagttgtacagcgcccaatatcacttcactgcttacctcaaagtgagattttaatttattcctaaccaa |
21343852 |
T |
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| Q |
115 |
ttttcatccttcatgtacttgcagttattatatttatatgctaactaaaatttcataaagcttagtagttagttttggtgtgcatgcaatgtggttttt |
213 |
Q |
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| T |
21343853 |
ttttcatccttcatgtacttgcagttattatatttatatgctaactaaaatttcataaagcttagtagttagttttggtgtgcatgcaatgtggttttt |
21343951 |
T |
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