View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2488-Insertion-1 (Length: 672)
Name: NF2488-Insertion-1
Description: NF2488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2488-Insertion-1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 388; Significance: 0; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 10 - 563
Target Start/End: Complemental strand, 17004328 - 17003775
Alignment:
| Q |
10 |
accatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnnca |
109 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
17004328 |
accatgtaagttgtagttgcattaacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaatttttttca |
17004229 |
T |
|
| Q |
110 |
cttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgattc |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17004228 |
cttcatccaccacatattggtccttatttttggcaaaggaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgattc |
17004129 |
T |
|
| Q |
210 |
tagggatagtgcacaatacttatcttctcctatagctgatgggcttctacaatagttgtcaagcccttctctctctttttcatcccacatctgagttgta |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
17004128 |
tagggatagtgcacaatacttatcttctcctatagctgatgggcttctacaatagttgtcaagcccttgtctctctttttcatcccacatgtgagttgta |
17004029 |
T |
|
| Q |
310 |
ataggttgtctctctttttcgttccacataaaagttgtagtaggttgtctctctttttcgccccacatgcgagttgtaagaggttgtctctctttttcac |
409 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||| |||||||||| |||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
17004028 |
ataggttgtctctctttttcgccccacatgcgagttgtaagaggttgtttctctttttcattccacatactagttgtaagaggttgtctctctttttcac |
17003929 |
T |
|
| Q |
410 |
cccatatactaattgtaagaggttggctctctttttcattccacatactagttgtaagaggttgtctccctttttcaccccatatactagttgtaagagg |
509 |
Q |
| |
|
|||| || | | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||||| |
|
|
| T |
17003928 |
cccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtctctttttttcaccccacatacgagttataagagg |
17003829 |
T |
|
| Q |
510 |
ttgtttcnnnnnnncattccacatgcgagttgtaagaggttgtctctctttttc |
563 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
17003828 |
ttgtctctctttttcattccacatgcgagttgtaagaggttgtcgctctttttc |
17003775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 315 - 604
Target Start/End: Complemental strand, 17004062 - 17003773
Alignment:
| Q |
315 |
ttgtctctctttttcgttccacataaaagttgtagtaggttgtctctctttttcgccccacatgcgagttgtaagaggttgtctctctttttcaccccat |
414 |
Q |
| |
|
||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
17004062 |
ttgtctctctttttcatcccacatgtgagttgtaataggttgtctctctttttcgccccacatgcgagttgtaagaggttgtttctctttttcattccac |
17003963 |
T |
|
| Q |
415 |
atactaattgtaagaggttggctctctttttcattccacatactagttgtaagaggttgtctccctttttcaccccatatactagttgtaagaggttgtt |
514 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||| |||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17003962 |
atactagttgtaagaggttgtctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtc |
17003863 |
T |
|
| Q |
515 |
tcnnnnnnncattccacatgcgagttgtaagaggttgtctctctttttcgccccacatgctagttgtaagaggttgtctctctttttcat |
604 |
Q |
| |
|
|| || |||||| |||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
17003862 |
tctttttttcaccccacatacgagttataagaggttgtctctctttttcattccacatgcgagttgtaagaggttgtcgctctttttcat |
17003773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 354 - 641
Target Start/End: Complemental strand, 17004062 - 17003775
Alignment:
| Q |
354 |
ttgtctctctttttcgccccacatgcgagttgtaagaggttgtctctctttttcaccccatatactaattgtaagaggttggctctctttttcattccac |
453 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||||| || | | ||||||||||||| ||||||||||||||||| |
|
|
| T |
17004062 |
ttgtctctctttttcatcccacatgtgagttgtaataggttgtctctctttttcgccccacatgcgagttgtaagaggttgtttctctttttcattccac |
17003963 |
T |
|
| Q |
454 |
atactagttgtaagaggttgtctccctttttcaccccatatactagttgtaagaggttgtttcnnnnnnncattccacatgcgagttgtaagaggttgtc |
553 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| || | |||||||||||||||| || || |||||| | ||||||||||||||||| |
|
|
| T |
17003962 |
atactagttgtaagaggttgtctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtc |
17003863 |
T |
|
| Q |
554 |
tctctttttcgccccacatgctagttgtaagaggttgtctctctttttcattccacatgcgagttgtaggaggctgtctctctttttc |
641 |
Q |
| |
|
||| |||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| |
|
|
| T |
17003862 |
tctttttttcaccccacatacgagttataagaggttgtctctctttttcattccacatgcgagttgtaagaggttgtcgctctttttc |
17003775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 436 - 669
Target Start/End: Complemental strand, 17004058 - 17003825
Alignment:
| Q |
436 |
ctctctttttcattccacatactagttgtaagaggttgtctccctttttcaccccatatactagttgtaagaggttgtttcnnnnnnncattccacatgc |
535 |
Q |
| |
|
||||||||||||| |||||| |||||||| |||||||||| ||||||| ||||| || | ||||||||||||||||||| |||||||||| | |
|
|
| T |
17004058 |
ctctctttttcatcccacatgtgagttgtaataggttgtctctctttttcgccccacatgcgagttgtaagaggttgtttctctttttcattccacatac |
17003959 |
T |
|
| Q |
536 |
gagttgtaagaggttgtctctctttttcgccccacatgctagttgtaagaggttgtctctctttttcattccacatgcgagttgtaggaggctgtctctc |
635 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||| | ||||||| |||| ||||||| |
|
|
| T |
17003958 |
tagttgtaagaggttgtctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtctctt |
17003859 |
T |
|
| Q |
636 |
tttttcgccccacatactagttgtaagaggttgt |
669 |
Q |
| |
|
|||||| |||||||||| |||| ||||||||||| |
|
|
| T |
17003858 |
tttttcaccccacatacgagttataagaggttgt |
17003825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 393 - 669
Target Start/End: Complemental strand, 17004062 - 17003786
Alignment:
| Q |
393 |
ttgtctctctttttcaccccatatactaattgtaagaggttggctctctttttcattccacatactagttgtaagaggttgtctccctttttcaccccat |
492 |
Q |
| |
|
|||||||||||||||| |||| || | |||||| |||||| ||||||||||| |||||| | |||||||||||||||| || |||||||| ||| |
|
|
| T |
17004062 |
ttgtctctctttttcatcccacatgtgagttgtaataggttgtctctctttttcgccccacatgcgagttgtaagaggttgtttctctttttcattccac |
17003963 |
T |
|
| Q |
493 |
atactagttgtaagaggttgtttcnnnnnnncattccacatgcgagttgtaagaggttgtctctctttttcgccccacatgctagttgtaagaggttgtc |
592 |
Q |
| |
|
||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
17003962 |
atactagttgtaagaggttgtctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtc |
17003863 |
T |
|
| Q |
593 |
tctctttttcattccacatgcgagttgtaggaggctgtctctctttttcgccccacatactagttgtaagaggttgt |
669 |
Q |
| |
|
||| ||||||| |||||| |||||| || |||| |||||||||||||| |||||| | |||||||||||||||| |
|
|
| T |
17003862 |
tctttttttcaccccacatacgagttataagaggttgtctctctttttcattccacatgcgagttgtaagaggttgt |
17003786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 281 - 486
Target Start/End: Complemental strand, 17003979 - 17003774
Alignment:
| Q |
281 |
tctctttttcatcccacatctgagttgtaataggttgtctctctttttcgttccacataaaagttgtagtaggttgtctctctttttcgccccacatgcg |
380 |
Q |
| |
|
|||||||||||| |||||| |||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||| | |
|
|
| T |
17003979 |
tctctttttcattccacatactagttgtaagaggttgtctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatact |
17003880 |
T |
|
| Q |
381 |
agttgtaagaggttgtctctctttttcaccccatatactaattgtaagaggttggctctctttttcattccacatactagttgtaagaggttgtctccct |
480 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||| | || |||||||||| |||||||||||||||||||| | ||||||||||||||||| | || |
|
|
| T |
17003879 |
agttgtaagaggttgtctctttttttcaccccacatacgagttataagaggttgtctctctttttcattccacatgcgagttgtaagaggttgtcgctct |
17003780 |
T |
|
| Q |
481 |
ttttca |
486 |
Q |
| |
|
|||||| |
|
|
| T |
17003779 |
ttttca |
17003774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 17107510 - 17107249
Alignment:
| Q |
10 |
accatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnnca |
109 |
Q |
| |
|
||||||||| ||| |||||||| |||||||| ||||||||||| | | ||||||||| ||||||||||||||||| |||||||||||| || |
|
|
| T |
17107510 |
accatgtaaactgttgttgcattaacttggtggcaataaaataccatgtctttgaaattcaatctatgacacatcactgctttgtctccaattttcttca |
17107411 |
T |
|
| Q |
110 |
cttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgattc |
209 |
Q |
| |
|
||||||||||| |||||| || | |||| |||||| |||||||||||||||||||| || || ||||||||||| |||||||||| | |||||||| |
|
|
| T |
17107410 |
cttcatccaccttatattgatcttggttttgggcaaaggaacttgaaatcaccttaatattagttccaagctttgatatggcaaaattcatcattgattt |
17107311 |
T |
|
| Q |
210 |
tagggatagtgcacaatacttatcttctcctatagctgatgggcttctacaatagttgtcaa |
271 |
Q |
| |
|
||||||| |||||||||||| ||||| |||||||| ||||| | | ||||||||||||||| |
|
|
| T |
17107310 |
aagggataatgcacaatacttctcttcccctatagcagatggacgtatacaatagttgtcaa |
17107249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 10 - 265
Target Start/End: Original strand, 17117320 - 17117575
Alignment:
| Q |
10 |
accatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnnca |
109 |
Q |
| |
|
||||||||| ||| |||||||| |||||||||||| |||||| || |||||||||||| | || |||||||| |||| | |||||||||| || |
|
|
| T |
17117320 |
accatgtaaactgttgttgcattaacttggtgacaagaaaatataatatttttgaaattcattcgatgacacaacaccgcgttgtctccaattttcttca |
17117419 |
T |
|
| Q |
110 |
cttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgattc |
209 |
Q |
| |
|
|||| |||||| |||||| || | |||| |||||| || |||| ||| |||||||| || || ||||||||||| |||||||||| | |||||||| |
|
|
| T |
17117420 |
cttcgtccaccctatattgatcttggttttgggcaaaggagcttgtaattaccttaatatttgttccaagctttgatatggcaaaattcatcattgattt |
17117519 |
T |
|
| Q |
210 |
tagggatagtgcacaatacttatcttctcctatagctgatgggcttctacaatagt |
265 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
17117520 |
tagggatagtgcacaatacttatcttctcctatagctgatgggtgtccacaatagt |
17117575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 279 - 448
Target Start/End: Complemental strand, 17003942 - 17003773
Alignment:
| Q |
279 |
tctctctttttcatcccacatctgagttgtaataggttgtctctctttttcgttccacataaaagttgtagtaggttgtctctctttttcgccccacatg |
378 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||||| |||||| |||||||| |
|
|
| T |
17003942 |
tctctctttttcaccccacatgcgagttgtaagaggttgtctctctttttcaccccacatactagttgtaagaggttgtctctttttttcaccccacata |
17003843 |
T |
|
| Q |
379 |
cgagttgtaagaggttgtctctctttttcaccccatatactaattgtaagaggttggctctctttttcat |
448 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||| || | | ||||||||||||| | ||||||||||| |
|
|
| T |
17003842 |
cgagttataagaggttgtctctctttttcattccacatgcgagttgtaagaggttgtcgctctttttcat |
17003773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 265
Target Start/End: Original strand, 17956404 - 17956661
Alignment:
| Q |
8 |
gaaccatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnn |
107 |
Q |
| |
|
|||||||||||||||| || ||||| |||||||| ||||| |||| ||| ||||| ||||| |||||||| |||||||| | |||||||| | |
|
|
| T |
17956404 |
gaaccatgtaagttgttgtcgcattgacttggtggcaatagaatagaacttttttaaaattcaatctatggcacatcactgcgttgtctcctattttatt |
17956503 |
T |
|
| Q |
108 |
cacttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgat |
207 |
Q |
| |
|
|||||| ||||||||||||||||| | |||||| | ||| |||||||| ||||| || || || | |||||||||||||| |||||||| | ||||||| |
|
|
| T |
17956504 |
cacttcttccaccacatattggtcatgatttttagaaaaggaacttgacatcactttgatattctttccaagctttgaaattgcaaaatccatcattgat |
17956603 |
T |
|
| Q |
208 |
tctagggatagtgcacaatacttatcttctcctatagctgatgggcttctacaatagt |
265 |
Q |
| |
|
||||| ||| ||||||||| || ||||| ||||| |||||||| || | |||||||| |
|
|
| T |
17956604 |
tctagtgatggtgcacaatgtttgtcttcccctattgctgatggtctcccacaatagt |
17956661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 17986566 - 17986810
Alignment:
| Q |
8 |
gaaccatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnn |
107 |
Q |
| |
|
|||| ||||| |||| |||||||| |||||||| |||||||||||||| | | |||||||| | ||||||||||||| |||||||||||| |
|
|
| T |
17986566 |
gaactatgtatgttgatgttgcattgacttggtggcaataaaatacaacttgatcgaaatttagtttatgacacatcacggctttgtctccaattttctt |
17986665 |
T |
|
| Q |
108 |
cacttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgat |
207 |
Q |
| |
|
|||||| | || | ||||||||| | |||| ||||| ||||||||||||| |||||| || | ||||||||||||||||| ||||||| ||||||| |
|
|
| T |
17986666 |
cacttcctgtactatatattggtcttggttttgtgcaaaggaacttgaaatcaacttaatattttttccaagctttgaaatggcgaaatctatcattgat |
17986765 |
T |
|
| Q |
208 |
tctagggatagtgcacaatacttatcttctcctatagctgatggg |
252 |
Q |
| |
|
||||||| | ||| |||||||| | |||||||||||||| |||| |
|
|
| T |
17986766 |
tctagggttgatgcgcaatacttgtgttctcctatagctgctggg |
17986810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 588 - 671
Target Start/End: Complemental strand, 17004062 - 17003979
Alignment:
| Q |
588 |
ttgtctctctttttcattccacatgcgagttgtaggaggctgtctctctttttcgccccacatactagttgtaagaggttgttt |
671 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
17004062 |
ttgtctctctttttcatcccacatgtgagttgtaataggttgtctctctttttcgccccacatgcgagttgtaagaggttgttt |
17003979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 17999355 - 17999441
Alignment:
| Q |
10 |
accatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtct |
96 |
Q |
| |
|
|||||||||||||| | |||||| ||||||||||||||||||||||| || | |||||| | || ||||||||| || |||||||| |
|
|
| T |
17999355 |
accatgtaagttgttgatgcattcacttggtgacaataaaatacaactttctcgaaattcattcgatgacacattactcctttgtct |
17999441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 17945406 - 17945650
Alignment:
| Q |
8 |
gaaccatgtaagttgtagttgcatttacttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnn |
107 |
Q |
| |
|
||||||||||||| || || || || | ||||| ||||| ||| |||| ||||| | ||| | ||||||||||||||| | |||||||| | |
|
|
| T |
17945406 |
gaaccatgtaagtcgttgtcgcgttgatctggtggcaatagaatccaacctttttaagattcattctatgacacatcactgcgttgtctcctatttttct |
17945505 |
T |
|
| Q |
108 |
cacttcatccaccacatattggtccttatttttggcaaaagaacttgaaatcaccttaatgttggtcccaagctttgaaatggcaaaatctaccattgat |
207 |
Q |
| |
|
|||||| ||||||| ||||||||| | ||| | ||| |||||||| ||||| ||||| || | ||||||||||||||||| ||||| | ||||||| |
|
|
| T |
17945506 |
cacttcctccaccatatattggtcttggctttgagaaaatgaacttgacatcactttaatattctttccaagctttgaaatggcgaaatccatcattgat |
17945605 |
T |
|
| Q |
208 |
tctagggatagtgcacaatacttatcttctcctatagctgatggg |
252 |
Q |
| |
|
||||| || |||||| | || |||||||||||||| |||||| |
|
|
| T |
17945606 |
tctagtgaatatgcacagtgtttctcttctcctatagccgatggg |
17945650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 167
Target Start/End: Original strand, 17258190 - 17258323
Alignment:
| Q |
34 |
acttggtgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaannnnnnncacttcatccaccacatattggtcct |
133 |
Q |
| |
|
|||||||| |||| |||||||| |||| |||||| ||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
17258190 |
acttggtggcaattgaatacaactttttcgaaattcaatctatgacacatcactgcattgtctccaacttttttcacttcctccaccacatattggtcct |
17258289 |
T |
|
| Q |
134 |
tatttttggcaaaagaacttgaaatcaccttaat |
167 |
Q |
| |
|
||| | |||| | |||||||||| ||||||| |
|
|
| T |
17258290 |
ggtttacgccaaaggtacttgaaatcgccttaat |
17258323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 34241483 - 34241423
Alignment:
| Q |
40 |
tgacaataaaatacaacatttttgaaattt-aatctatgacacatcaccactttgtctccaa |
100 |
Q |
| |
|
||||||||||||||||| ||||||||| || || |||||||||||||| |||||||||||| |
|
|
| T |
34241483 |
tgacaataaaatacaac-tttttgaaagttcaacctatgacacatcactgctttgtctccaa |
34241423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 34315650 - 34315590
Alignment:
| Q |
40 |
tgacaataaaatacaacatttttgaaatttaatctatgacacatcaccactttgtctccaa |
100 |
Q |
| |
|
||||||||| ||||||| |||| |||||| || || |||||||||||| |||| ||||||| |
|
|
| T |
34315650 |
tgacaataatatacaaccttttggaaattcaacctgtgacacatcacccctttatctccaa |
34315590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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