View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2488R-Insertion-5 (Length: 451)
Name: NF2488R-Insertion-5
Description: NF2488R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2488R-Insertion-5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 411; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 9 - 451
Target Start/End: Complemental strand, 36730342 - 36729900
Alignment:
| Q |
9 |
atagacattgacaagtgtccttgtatgagctttgatatcatagccgttgattttgcaatcttctgatgattgtctaagagcaaacggtgccgttggatga |
108 |
Q |
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| T |
36730342 |
atagacattgacaagtgtccttgtatgagctttgatatcatagccgttgattttgcaatcttctgatgattgtctaagagcaaacggtgccgttggatga |
36730243 |
T |
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| Q |
109 |
agtcttagcacttctttcacacatgattgtaggtaaggcatttttggaatgtctgattctttaaccaatctattagtacctactacatcattaatctcag |
208 |
Q |
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| T |
36730242 |
agtcttagcacttctttcacacatgattgtaggtaaggcatttttggaatgtctgattctttaaccaatctattagtacctactacatcattaatctcag |
36730143 |
T |
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| Q |
209 |
cccttaatttcttcaatattttagggttgttcattatctcagccatggtccattgcattgccactgaggatgtgtctgttccagccaggaaaatgtcctt |
308 |
Q |
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| T |
36730142 |
cccttaatttcttcaatattttagggttgttcattatctcagccatggtccattgcattgccactgaggatgtatctgttccagcgaggaaaatgtcctt |
36730043 |
T |
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| Q |
309 |
gcatttgcataaacatgtataataatctcattaaattgaactcaccaactactataatgatcatatcatgtaattttaatttaatggccatggccacatc |
408 |
Q |
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| T |
36730042 |
gcatttgcataaacaagtataataatctcattaaattgaactcaccaagtactataatgatcatatcatgtgattttaatttaatggccatggccacatc |
36729943 |
T |
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| Q |
409 |
cagcgaggaaaatctccttgcatttgcattgcaacttgattat |
451 |
Q |
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| T |
36729942 |
cagcgaggaaaatgtccctgcatttgcattgccacttgattat |
36729900 |
T |
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