View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2491_high_15 (Length: 235)

Name: NF2491_high_15
Description: NF2491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2491_high_15
NF2491_high_15
[»] chr2 (16 HSPs)
chr2 (1-221)||(10336067-10336287)
chr2 (60-218)||(9328825-9328983)
chr2 (49-218)||(9274744-9274913)
chr2 (2-169)||(12012234-12012398)
chr2 (38-218)||(9321205-9321385)
chr2 (60-171)||(9283933-9284044)
chr2 (134-218)||(10348020-10348104)
chr2 (60-156)||(10353412-10353508)
chr2 (120-167)||(12005921-12005968)
chr2 (38-208)||(8573220-8573390)
chr2 (132-218)||(9065407-9065493)
chr2 (61-175)||(9316300-9316414)
chr2 (61-208)||(9060879-9061026)
chr2 (153-218)||(7115475-7115540)
chr2 (132-206)||(16269327-16269401)
chr2 (46-111)||(17565804-17565869)
[»] chr1 (4 HSPs)
chr1 (1-207)||(29467476-29467679)
chr1 (60-218)||(29423497-29423655)
chr1 (47-218)||(29453043-29453214)
chr1 (60-186)||(29443070-29443199)
[»] chr8 (1 HSPs)
chr8 (114-218)||(41966520-41966624)
[»] chr4 (1 HSPs)
chr4 (1-156)||(26575164-26575316)
[»] scaffold0667 (1 HSPs)
scaffold0667 (129-208)||(4722-4801)
[»] chr3 (1 HSPs)
chr3 (1-91)||(37462854-37462941)


Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 10336287 - 10336067
Alignment:
Q  1 ctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10336287 ctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttccgg 10336188  T
Q  101 atatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttg 200  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10336187 atatgccgtatattctttactatactctaaccatgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttg 10336088  T
Q  201 tttaattgctgcgtttaatct 221  Q
    |||||||||||||||||||||    
T  10336087 tttaattgctgcgtttaatct 10336067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 9328983 - 9328825
Alignment:
Q  60 actcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctctt 159  Q
    |||||||| ||| ||||||||||||||||||| | |||| | |||||| ||   ||||  |||| ||| || || ||| ||||| |||||||||||||||    
T  9328983 actcttcaactctaaaacaaactcttggaaaataattcctgctatgccctacgctcttgtctatgctcaaaacacgggggttttggttgagaattctctt 9328884  T
Q  160 cactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    |||||||||||||||  |||||||| ||| ||||| |||| |||||||| |||||||||    
T  9328883 cactggataatgactaagaaacttggtggattacatccttctttaattgttgcgtttaa 9328825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 9274913 - 9274744
Alignment:
Q  49 tcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttg 148  Q
    |||||| ||| ||||||||||| |||||||||||| ||||||| | |||||  |||||| ||   |||| | |||  || | |||||||  |||||||||    
T  9274913 tcacatgtgagactcttcagcttgaaaacaaactcgtggaaaataattcccagtatgccgtacgctcttaaatatgttcaagccatggggatttttgttg 9274814  T
Q  149 agaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    ||||||||||||||||| ||||||||  | || |||||| || ||| ||||||||||||| |||||||||    
T  9274813 agaattctcttcactgggtaatgactagggaaattgatgagtcacacccttgtttaattgttgcgtttaa 9274744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 12012234 - 12012398
Alignment:
Q  2 tcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccga 101  Q
    ||||||||||||||||||| ||| ||||| ||  ||||||||||   ||| || | | |||||||| ||||||||||||||| ||||||  ||||||       
T  12012234 tcagaatctcttggttcgttgatttacaaaactctacttttgat---tcatatgtcagactcttcacctcgaaaacaaactcgtggaaagtacttcctag 12012330  T
Q  102 tatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctcttcactggataa 169  Q
    |||    ||| |||||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||    
T  12012331 tatagactatgttctttgctatgctctaaccatgggagtttttgttgagaattctcttcattggataa 12012398  T

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Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 38 - 218
Target Start/End: Complemental strand, 9321385 - 9321205
Alignment:
Q  38 cttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatggg 137  Q
    ||||| || |||||||| | | |||||||||||| | ||||||||| ||||||| | |||||  |||||| ||   ||||  |||| ||| |  ||||||    
T  9321385 ctttttatgattcacatgtcagactcttcagctctataacaaactcgtggaaaataattcccagtatgccgtactctcttatctatgctcaattcatggg 9321286  T
Q  138 tgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
     |||||||||||||||||||||||||||||||||||   |||||||| ||| ||||| |||| |||||||| ||| |||||    
T  9321285 ggtttttgttgagaattctcttcactggataatgacaaagaaacttggtggattacatccttctttaattgttgcatttaa 9321205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 9283933 - 9284044
Alignment:
Q  60 actcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctctt 159  Q
    |||||||||||| ||||||||||| ||||||| | ||||   |||||| || | | |||||||| ||| | ||||||| |||||||||||||||||| ||    
T  9283933 actcttcagctccaaaacaaactcgtggaaaataattcctattatgccctacactgtttactatgctcaagccatgggggtttttgttgagaattctatt 9284032  T
Q  160 cactggataatg 171  Q
    ||||||||||||    
T  9284033 cactggataatg 9284044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 10348104 - 10348020
Alignment:
Q  134 tgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    |||| |||||||||||||||||| |||||||||| |||||   |||||||||||||||||| |||| ||||||||  ||||||||    
T  10348104 tgggggtttttgttgagaattctattcactggattatgacgaagaaacttgatgggttacatccttctttaattgtcgcgtttaa 10348020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 10353508 - 10353412
Alignment:
Q  60 actcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattct 156  Q
    ||||||||||| |||||||||||| ||||||  | ||||  || ||||||||  |||||||||| || |||| ||||| ||||||||||||||||||    
T  10353508 actcttcagcttgaaaacaaactcatggaaagtaattcctaatttgccttattctctttactatgctttaacaatgggggtttttgttgagaattct 10353412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 12005921 - 12005968
Alignment:
Q  120 ctatactctaaccatgggtgtttttgttgagaattctcttcactggat 167  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  12005921 ctatgctctaaccatgggggtttttgttgagaattctcttcactggat 12005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 8573220 - 8573390
Alignment:
Q  38 cttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatggg 137  Q
    ||||| || |||||||| | |||||||| |||| |||||||||||| ||||||||| |||||  || ||| ||   |||| | |||  || | |||||||    
T  8573220 ctttttatgattcacatgtcacactctttagcttgaaaacaaactcgtggaaaacaattcccagtacgccatacgctcttcaatatgttcaagccatggg 8573319  T
Q  138 tgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattg 208  Q
     ||||||||| ||||||||||||||||| | ||| |   |||||||||||||| | | ||||| |||||||    
T  8573320 ggtttttgttcagaattctcttcactgggttatggccaagaaacttgatgggtcatatccttggttaattg 8573390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 218
Target Start/End: Original strand, 9065407 - 9065493
Alignment:
Q  132 catgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    |||||| |||||||||||||||||| |||||| |||||||||   |||||| ||| ||||||| |||| |||||||| ||| |||||    
T  9065407 catgggggtttttgttgagaattctattcacttgataatgacgaagaaactagatcggttacatccttctttaattgttgcatttaa 9065493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 9316414 - 9316300
Alignment:
Q  61 ctcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctcttc 160  Q
    ||||| |||| |||||||||||| ||||||||| |||||  |||||| ||   |||| | |||  || | ||||||| ||||||||| ||||||||||||    
T  9316414 ctctttagcttgaaaacaaactcgtggaaaacaattcccagtatgccgtacgctcttcaatatgttcaagccatgggggtttttgttcagaattctcttc 9316315  T
Q  161 actggataatgactc 175  Q
    ||||| |||||||||    
T  9316314 actgggtaatgactc 9316300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 9060879 - 9061026
Alignment:
Q  61 ctcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctcttc 160  Q
    ||||| |||| |||||||||||| ||||||||| |||||  |||||| ||   |||| | |||  || | ||||||| ||||||||| ||||||||||||    
T  9060879 ctctttagcttgaaaacaaactcgtggaaaacaattcccagtatgccgtacgctcttcaatatgttcaagccatgggggtttttgttcagaattctcttc 9060978  T
Q  161 actggataatgactccgaaacttgatgggttacaaccttgtttaattg 208  Q
    ||||| | ||| |   |||||||||||||| | | ||||| |||||||    
T  9060979 actgggttatggccaagaaacttgatgggtcatatccttggttaattg 9061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 7115475 - 7115540
Alignment:
Q  153 ttctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    |||| |||||||||||||| ||| ||||||||||| || ||| |||||||||||||  ||||||||    
T  7115475 ttctgttcactggataatgtctcggaaacttgatgagtcacacccttgtttaattgtcgcgtttaa 7115540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 16269401 - 16269327
Alignment:
Q  132 catgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaat 206  Q
    |||||| |||||||||||||||||| ||| ||| |||||| |   ||||||||| |||||||| |||| ||||||    
T  16269401 catgggggtttttgttgagaattctattcgctgtataatggcgaagaaacttgacgggttacatccttctttaat 16269327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 17565804 - 17565869
Alignment:
Q  46 aattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttat 111  Q
    ||||||||  ||| |||||||| || |||||| ||||| ||||||| ||||||| |||||||||||    
T  17565804 aattcacaagtgagactcttcaacttgaaaacgaactcgtggaaaatacttcccaatatgccttat 17565869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 29467476 - 29467679
Alignment:
Q  1 ctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccg 100  Q
    |||||||||||||| |||||| | ||||| ||||| |||  ||||   |||||| | |||||||||||||||||||| ||||| ||||||  |||| |      
T  29467476 ctcagaatctcttgtttcgtcaaactacaccaccacactcatgat---tcacatgttacactcttcagctcgaaaacgaactcctggaaagtactttcta 29467572  T
Q  101 atatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttg 200  Q
     |||||| ||   |||||||||| ||| ||||||||  ||||||||||||||||||||||| ||||||||||    ||||||||||||||||||| ||||    
T  29467573 gtatgccgtactctctttactatcctcaaaccatggtggtttttgttgagaattctcttcattggataatgaagaagaaacttgatgggttacaatcttg 29467672  T
Q  201 tttaatt 207  Q
    |||||||    
T  29467673 tttaatt 29467679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 60 - 218
Target Start/End: Complemental strand, 29423655 - 29423497
Alignment:
Q  60 actcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgttgagaattctctt 159  Q
    |||||||||||||||||||||||| ||||||  ||||||    |||||||| | |||||||||| ||| ||| ||||| |||||||||||||||||||||    
T  29423655 actcttcagctcgaaaacaaactcgtggaaagaacttcctaccatgccttacactctttactatgctcaaacaatgggggtttttgttgagaattctctt 29423556  T
Q  160 cactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    ||||||||||||||   ||||||||||  |||  ||||| || |||||| |||||||||    
T  29423555 cactggataatgacggagaaacttgatccgttgaaacctcgtgtaattgttgcgtttaa 29423497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 29453043 - 29453214
Alignment:
Q  47 attcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaaccatgggtgtttttgt 146  Q
    |||||||| ||| |||||||||||||||||  ||||| ||||||   |||||   |||||| ||   ||||| |||| ||| |||   ||| ||||||||    
T  29453043 attcacatgtgagactcttcagctcgaaaatgaactcgtggaaagaccttcctagtatgccgtacgctctttcctatcctcgaacagagggggtttttgt 29453142  T
Q  147 tgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcgtttaa 218  Q
    ||||||||||||||||||||||||||||| |||||||| |  ||| ||| || || |||||| |||||||||    
T  29453143 tgagaattctcttcactggataatgactcggaaacttggtcagttgcaatctcgtgtaattgttgcgtttaa 29453214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 29443070 - 29443199
Alignment:
Q  60 actcttcagctcgaaaacaaactcttggaaaacacttcccgatatgccttatattctttactatactctaa---ccatgggtgtttttgttgagaattct 156  Q
    |||||||||||  ||||||||||| ||||||  ||||||   ||||||||| | ||||| |||| ||| ||   | ||||| | |||||||||||||||     
T  29443070 actcttcagcttcaaaacaaactcgtggaaagaacttcctactatgccttacactctttcctatgctcgaagaacaatgggggattttgttgagaattcc 29443169  T
Q  157 cttcactggataatgactccgaaacttgat 186  Q
    ||||||||| ||||||||| ||||||||||    
T  29443170 cttcactgggtaatgactcggaaacttgat 29443199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 41966520 - 41966624
Alignment:
Q  114 tctttactatactctaaccatgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattgctgcg 213  Q
    |||||||||| ||| ||||||||| ||||||||| | |||||||||||||||||||||||   | |||||||||| ||||| |||||||||||||  |||    
T  41966520 tctttactatgctcaaaccatgggggtttttgttcacaattctcttcactggataatgaccaaggaacttgatggattacacccttgtttaattgtcgcg 41966619  T
Q  214 tttaa 218  Q
    |||||    
T  41966620 tttaa 41966624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26575316 - 26575164
Alignment:
Q  1 ctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaacacttcccg 100  Q
    |||||||||||||  ||  ||||||||||| |||   ||||| || || ||||| | | ||||||||||| |||||||||||| ||||||| | ||||      
T  26575316 ctcagaatctcttacttgctcgatctacaaaacc---ctttttatgatccacatgttagactcttcagcttgaaaacaaactcatggaaaataattccta 26575220  T
Q  101 atatgccttatattctttactatactctaaccatgggtgtttttgttgagaattct 156  Q
    || | |||||   |||||||||||||| ||| ||||||||||||||||||||||||    
T  26575219 attttccttacgctctttactatactcgaacaatgggtgtttttgttgagaattct 26575164  T

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Target: scaffold0667 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 4801 - 4722
Alignment:
Q  129 aaccatgggtgtttttgttgagaattctcttcactggataatgactccgaaacttgatgggttacaaccttgtttaattg 208  Q
    ||||||||| ||||| |||||| ||||| |||||||||||||| |   |||||||||||||||||| |||| | ||||||    
T  4801 aaccatgggggttttggttgaggattctattcactggataatggcaaagaaacttgatgggttacatccttctctaattg 4722  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37462941 - 37462854
Alignment:
Q  1 ctcagaatctcttggttcgtcgatctacaacaccatacttttgataattcacatttgacactcttcagctcgaaaacaaactcttggaaaa 91  Q
    ||||||||||||||| |  ||||||||||| |||   ||||| || || ||||| ||| |||||||||||| ||||||||||| |||||||    
T  37462941 ctcagaatctcttggcttctcgatctacaaaacc---ctttttatgatccacatgtgagactcttcagctccaaaacaaactcgtggaaaa 37462854  T

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