View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2491_high_4 (Length: 435)
Name: NF2491_high_4
Description: NF2491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2491_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 389; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 428
Target Start/End: Complemental strand, 37054587 - 37054157
Alignment:
| Q |
1 |
tctgttcatgaagaaaaactagtaa---aaaatgaacatgaatgtgttgataaaattgttcatgaggattgtgattcatcagaagatgaaagctttcatt |
97 |
Q |
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| T |
37054587 |
tctgttcatgaagaagaactagtaataaaaaatgaacatgaatgtgttgataaaattgttcatgaagattgtgattcatcagaagatgaaagctttcatt |
37054488 |
T |
|
| Q |
98 |
catttgttgattcacaatcaaatacaagactttctaatgcttcagctggtagcctaagtgacacacaatctttgttattgtcaccgcaaaattcattttc |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
37054487 |
catttgttgattcacaatcaaatacaagactttctaatgcttcagctggtagcctaagtgacacacaatctttgttattgtcacctcaaaattcattttc |
37054388 |
T |
|
| Q |
198 |
attattaccaaaccaattacctagttctccacaaaacacaaatgattctcaccaaccaccttatagtccaaaacaaaaagaccaagagattgaaaatgaa |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37054387 |
attattaccaaaccaattacctagttctccacaaaacacaaatgattctcaccaaccaccttatagtccaaaacaaaaagaccaagatattgaaaatgaa |
37054288 |
T |
|
| Q |
298 |
acctttgtccaatgtccacaaacatctaattcctctccacctcctccgccaccgccaccgccaacaccaccattgaaaatgccactctttactttacatt |
397 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37054287 |
acctttgtccaatgtccacaaacatctaattcctctccacctcctcctccgccgccaccaccaacaccaccattgaaaatgccactctttactttacatt |
37054188 |
T |
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| Q |
398 |
cattaacaacttcatctagagtttcatctca |
428 |
Q |
| |
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||||||||||||||||||||||||||||||| |
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| T |
37054187 |
cattaacaacttcatctagagtttcatctca |
37054157 |
T |
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