View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2491_high_9 (Length: 280)

Name: NF2491_high_9
Description: NF2491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2491_high_9
NF2491_high_9
[»] chr5 (27 HSPs)
chr5 (18-170)||(29598571-29598723)
chr5 (227-280)||(20591486-20591539)
chr5 (227-280)||(12661959-12662012)
chr5 (227-280)||(18449267-18449320)
chr5 (227-280)||(34381018-34381071)
chr5 (227-280)||(39191846-39191899)
chr5 (227-280)||(39595278-39595331)
chr5 (229-280)||(40223797-40223848)
chr5 (227-280)||(1774295-1774348)
chr5 (227-280)||(9714148-9714201)
chr5 (227-280)||(11768002-11768055)
chr5 (227-280)||(19376144-19376197)
chr5 (227-280)||(26660423-26660476)
chr5 (227-280)||(26932015-26932068)
chr5 (227-280)||(36713190-36713243)
chr5 (227-279)||(10232505-10232557)
chr5 (227-279)||(25255258-25255310)
chr5 (227-279)||(25319048-25319100)
chr5 (227-279)||(34952419-34952471)
chr5 (19-65)||(29594155-29594201)
chr5 (227-280)||(12779618-12779671)
chr5 (227-280)||(19127130-19127183)
chr5 (227-280)||(24431630-24431683)
chr5 (227-280)||(28903997-28904050)
chr5 (227-280)||(28940392-28940445)
chr5 (227-280)||(31708376-31708429)
chr5 (227-279)||(12718393-12718445)
[»] chr7 (22 HSPs)
chr7 (227-280)||(24267659-24267712)
chr7 (227-280)||(23761065-23761118)
chr7 (227-280)||(40842411-40842464)
chr7 (227-279)||(28824509-28824561)
chr7 (230-279)||(18067900-18067949)
chr7 (227-280)||(19426586-19426639)
chr7 (227-280)||(45607030-45607083)
chr7 (227-280)||(48866942-48866995)
chr7 (227-280)||(155993-156047)
chr7 (227-280)||(2008869-2008923)
chr7 (234-280)||(46022494-46022540)
chr7 (227-277)||(47905131-47905181)
chr7 (227-280)||(2790183-2790236)
chr7 (227-280)||(5378633-5378686)
chr7 (227-280)||(5724044-5724097)
chr7 (227-280)||(9055273-9055326)
chr7 (227-276)||(28596912-28596961)
chr7 (227-280)||(31436425-31436478)
chr7 (227-280)||(33684686-33684739)
chr7 (227-280)||(40693540-40693593)
chr7 (227-280)||(41815151-41815204)
chr7 (227-280)||(46651678-46651731)
[»] chr1 (32 HSPs)
chr1 (227-280)||(24611850-24611903)
chr1 (227-280)||(1724244-1724296)
chr1 (227-280)||(24910146-24910199)
chr1 (227-280)||(50226891-50226944)
chr1 (227-280)||(33422231-33422284)
chr1 (227-280)||(37843444-37843497)
chr1 (227-280)||(39010820-39010873)
chr1 (227-280)||(20288351-20288405)
chr1 (227-280)||(22389537-22389591)
chr1 (227-280)||(27742623-27742677)
chr1 (234-280)||(33675913-33675959)
chr1 (227-280)||(48858829-48858883)
chr1 (227-280)||(366663-366716)
chr1 (227-276)||(4604426-4604475)
chr1 (227-280)||(8464525-8464578)
chr1 (227-280)||(11097896-11097949)
chr1 (227-280)||(15061851-15061904)
chr1 (227-280)||(16658444-16658497)
chr1 (227-280)||(27810259-27810312)
chr1 (227-280)||(28253021-28253074)
chr1 (227-280)||(30530411-30530464)
chr1 (227-280)||(31436826-31436879)
chr1 (227-280)||(36231718-36231771)
chr1 (227-280)||(44112460-44112513)
chr1 (227-280)||(44641915-44641968)
chr1 (227-280)||(48872385-48872438)
chr1 (227-280)||(49425744-49425796)
chr1 (227-255)||(5975554-5975582)
chr1 (227-279)||(9882672-9882724)
chr1 (227-279)||(12489594-12489646)
chr1 (227-279)||(18541064-18541116)
chr1 (241-280)||(24806233-24806273)
[»] scaffold0511 (1 HSPs)
scaffold0511 (227-280)||(11644-11697)
[»] chr8 (28 HSPs)
chr8 (227-280)||(11879502-11879555)
chr8 (227-280)||(11896918-11896971)
chr8 (227-280)||(21418604-21418657)
chr8 (227-280)||(40102029-40102082)
chr8 (227-280)||(45101402-45101455)
chr8 (227-280)||(6105448-6105501)
chr8 (227-280)||(7678738-7678791)
chr8 (227-280)||(11223871-11223924)
chr8 (227-280)||(12659058-12659111)
chr8 (227-280)||(27630903-27630956)
chr8 (235-280)||(32174968-32175013)
chr8 (227-279)||(35633982-35634034)
chr8 (227-280)||(1068612-1068666)
chr8 (227-269)||(7279978-7280020)
chr8 (227-280)||(10653795-10653846)
chr8 (235-280)||(12490784-12490830)
chr8 (227-280)||(3756907-3756960)
chr8 (227-280)||(10553095-10553148)
chr8 (227-280)||(13884172-13884225)
chr8 (227-280)||(21648943-21648996)
chr8 (227-280)||(22852851-22852904)
chr8 (227-280)||(27836186-27836239)
chr8 (227-280)||(28473557-28473610)
chr8 (227-280)||(34473955-34474008)
chr8 (227-280)||(42716326-42716379)
chr8 (227-255)||(324120-324148)
chr8 (227-279)||(34996373-34996425)
chr8 (227-279)||(43290878-43290930)
[»] chr6 (14 HSPs)
chr6 (227-280)||(18792444-18792497)
chr6 (227-280)||(21506342-21506395)
chr6 (227-280)||(29383563-29383616)
chr6 (227-280)||(31480846-31480899)
chr6 (227-280)||(8395348-8395401)
chr6 (227-280)||(9954554-9954607)
chr6 (227-279)||(29643430-29643482)
chr6 (229-280)||(32853156-32853207)
chr6 (227-280)||(33712326-33712380)
chr6 (227-280)||(3821384-3821437)
chr6 (227-280)||(8778884-8778937)
chr6 (227-280)||(14094917-14094970)
chr6 (227-280)||(19789088-19789141)
chr6 (227-280)||(28965852-28965905)
[»] chr4 (32 HSPs)
chr4 (227-278)||(50159001-50159052)
chr4 (227-280)||(46566935-46566988)
chr4 (227-280)||(46794513-46794566)
chr4 (227-280)||(47540141-47540194)
chr4 (227-280)||(52392237-52392290)
chr4 (227-280)||(3664772-3664825)
chr4 (227-280)||(4896512-4896565)
chr4 (227-280)||(6953400-6953453)
chr4 (227-280)||(11064101-11064154)
chr4 (227-280)||(23347781-23347834)
chr4 (227-280)||(24772677-24772730)
chr4 (227-280)||(34116552-34116605)
chr4 (227-280)||(53583140-53583193)
chr4 (227-280)||(5932775-5932829)
chr4 (227-280)||(1031761-1031814)
chr4 (227-280)||(1562548-1562601)
chr4 (227-280)||(15596402-15596455)
chr4 (227-280)||(17363236-17363289)
chr4 (227-280)||(25725706-25725759)
chr4 (227-280)||(36792338-36792391)
chr4 (227-280)||(39010149-39010202)
chr4 (227-264)||(39067978-39068015)
chr4 (227-280)||(39844270-39844323)
chr4 (227-280)||(40409178-40409231)
chr4 (227-280)||(44165915-44165968)
chr4 (227-280)||(45277093-45277146)
chr4 (227-280)||(51296201-51296254)
chr4 (227-280)||(55595955-55596008)
chr4 (227-279)||(12694441-12694493)
chr4 (227-279)||(31147237-31147289)
chr4 (227-275)||(38844507-38844555)
chr4 (227-279)||(51039129-51039181)
[»] scaffold0204 (1 HSPs)
scaffold0204 (227-280)||(27345-27398)
[»] chr3 (38 HSPs)
chr3 (227-280)||(6126460-6126513)
chr3 (227-280)||(26279890-26279943)
chr3 (227-280)||(32457767-32457820)
chr3 (227-280)||(42104471-42104524)
chr3 (227-280)||(108437-108490)
chr3 (227-280)||(1901938-1901991)
chr3 (227-280)||(1911384-1911437)
chr3 (227-280)||(8066361-8066414)
chr3 (227-280)||(11173464-11173517)
chr3 (227-280)||(14207381-14207434)
chr3 (227-280)||(14215129-14215182)
chr3 (227-280)||(20380901-20380954)
chr3 (227-280)||(24537225-24537278)
chr3 (227-280)||(35425684-35425737)
chr3 (227-280)||(36869849-36869902)
chr3 (227-280)||(37303086-37303139)
chr3 (227-280)||(43900769-43900822)
chr3 (227-280)||(44334813-44334866)
chr3 (227-280)||(48649586-48649639)
chr3 (227-280)||(51464284-51464337)
chr3 (227-279)||(18169163-18169215)
chr3 (227-279)||(22813078-22813130)
chr3 (227-279)||(28300661-28300713)
chr3 (227-280)||(7294111-7294165)
chr3 (234-280)||(32717603-32717649)
chr3 (227-280)||(48353002-48353056)
chr3 (227-280)||(462413-462466)
chr3 (227-280)||(9027879-9027932)
chr3 (227-280)||(20215954-20216007)
chr3 (227-280)||(34733303-34733356)
chr3 (227-280)||(35272033-35272086)
chr3 (227-280)||(37303389-37303442)
chr3 (227-280)||(39540241-39540294)
chr3 (227-280)||(41877623-41877676)
chr3 (227-279)||(2482687-2482739)
chr3 (227-279)||(11335315-11335367)
chr3 (227-279)||(46003711-46003763)
chr3 (227-279)||(49457571-49457623)
[»] chr2 (32 HSPs)
chr2 (227-280)||(5455465-5455518)
chr2 (227-280)||(11229333-11229386)
chr2 (227-279)||(9449428-9449480)
chr2 (227-279)||(36376862-36376914)
chr2 (227-280)||(1889153-1889206)
chr2 (227-280)||(2308334-2308387)
chr2 (227-280)||(4723572-4723625)
chr2 (227-280)||(13711067-13711120)
chr2 (227-280)||(30856813-30856866)
chr2 (227-280)||(32688556-32688609)
chr2 (227-280)||(42141606-42141659)
chr2 (227-278)||(5067660-5067711)
chr2 (235-280)||(23690521-23690567)
chr2 (227-280)||(546397-546450)
chr2 (227-280)||(4738584-4738637)
chr2 (227-280)||(7086136-7086189)
chr2 (227-280)||(7498003-7498056)
chr2 (227-280)||(14797662-14797715)
chr2 (227-280)||(15283262-15283315)
chr2 (227-280)||(23880101-23880154)
chr2 (227-280)||(29168731-29168784)
chr2 (227-280)||(31296857-31296910)
chr2 (227-280)||(31635822-31635875)
chr2 (227-280)||(32750004-32750057)
chr2 (227-280)||(33296083-33296136)
chr2 (227-280)||(34249586-34249639)
chr2 (227-280)||(36435687-36435740)
chr2 (227-280)||(36587480-36587533)
chr2 (227-280)||(42554782-42554835)
chr2 (227-280)||(42665824-42665877)
chr2 (228-280)||(4842532-4842584)
chr2 (241-280)||(37316826-37316866)
[»] scaffold0002 (2 HSPs)
scaffold0002 (227-280)||(6433-6486)
scaffold0002 (227-280)||(440724-440777)
[»] scaffold0131 (1 HSPs)
scaffold0131 (227-277)||(15549-15599)
[»] scaffold0508 (1 HSPs)
scaffold0508 (227-280)||(11548-11601)
[»] scaffold0041 (1 HSPs)
scaffold0041 (227-280)||(34414-34467)
[»] scaffold0026 (1 HSPs)
scaffold0026 (227-280)||(113631-113684)
[»] scaffold0014 (1 HSPs)
scaffold0014 (227-280)||(199272-199325)
[»] scaffold0128 (1 HSPs)
scaffold0128 (241-280)||(10956-10996)
[»] scaffold0011 (1 HSPs)
scaffold0011 (227-271)||(219685-219729)
[»] scaffold0009 (1 HSPs)
scaffold0009 (227-279)||(263708-263760)


Alignment Details
Target: chr5 (Bit Score: 124; Significance: 8e-64; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 29598571 - 29598723
Alignment:
Q  18 agaagactgctaaaccctaatggggcggtatagggacaaaaacaaattaaatatagtgtatatatctttggtagcaattaaatccatgtaaaatctaata 117  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29598571 agaagactgctaaaccctaatgcggcagtatagggacaaaaacaaattaaatatagtgtatatatctttggtagcaattaaatccatgtaaaatctaata 29598670  T
Q  118 tataatttatttannnnnnnagaggaaaatctaatatataatataccttaggc 170  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||    
T  29598671 tataatttatttattttttgagaggaaaatctaatatataatataccttaggc 29598723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 20591539 - 20591486
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  20591539 tgatatatgtacatccactttttgacaattttttgacaactttctctctcatac 20591486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 12662012 - 12661959
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  12662012 tgatatttgtacatccactttgtgacaattttttgacaactttctctctcatac 12661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 18449267 - 18449320
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| |||| |||||||||||||||||||    
T  18449267 tgatatttgtacatccactttgtgacaactttttaacaactttctctctcatac 18449320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 34381018 - 34381071
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  34381018 tgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatac 34381071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 39191899 - 39191846
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||    
T  39191899 tgatatatgtacatccactttttaacaattttttgacaactttctctcttatac 39191846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 39595278 - 39595331
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  39595278 tgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatac 39595331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 40223848 - 40223797
Alignment:
Q  229 atatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  40223848 atatttgtacaaccactttgtgacaactttttgacaactttctctctcatac 40223797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 1774348 - 1774295
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||| ||||| ||||||| | ||||||||||||||||||||||    
T  1774348 tgatatttgtacatctactttgtgacaacttcttgacaactttctctctcatac 1774295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 9714201 - 9714148
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||||||| ||||||| |||| |||| ||||||||||||||    
T  9714201 tgatatatgtacaaccactttatgacaactttttaacaattttctctctcatac 9714148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11768055 - 11768002
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| | |||||||||||| |||||||||    
T  11768055 tgatatttgtacatccactttgtgacaacttcttgacaactttccctctcatac 11768002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 19376197 - 19376144
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||| |||||||||||||||||    
T  19376197 tgatatttgtacaaccactttctgacaactttttgataactttctctctcatac 19376144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 26660476 - 26660423
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  26660476 tgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatac 26660423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 26932068 - 26932015
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  26932068 tgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatac 26932015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 36713243 - 36713190
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  36713243 tgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatac 36713190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 10232505 - 10232557
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||||| ||||| ||| ||| |||||||||||||||||||||||    
T  10232505 tgatatttgtacatcaactttgtgataaccttttgacaactttctctctcata 10232557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 25255258 - 25255310
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||||||||||||||||||||  |||| |||| |||||||||| |||||||    
T  25255258 tgatatatgtacatccactttttaccaactttttaacaactttctatctcata 25255310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 25319048 - 25319100
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||||||||||||||||||||  |||| |||| |||||||||| |||||||    
T  25319048 tgatatatgtacatccactttttaccaactttttaacaactttctatctcata 25319100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 34952471 - 34952419
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| | |||||||||| ||||||||||||||||||    
T  34952471 tgatatttgtacaaccactttattacaacattttcacaactttctctctcata 34952419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 29594155 - 29594201
Alignment:
Q  19 gaagactgctaaaccctaatggggcggtatagggacaaaaacaaatt 65  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||||||    
T  29594155 gaagactgctaaaccctaatacggcagtatagggacaaaaccaaatt 29594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 12779671 - 12779618
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||| ||||||||||    
T  12779671 tgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcatac 12779618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 19127130 - 19127183
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| | ||||||||| ||||||||||||    
T  19127130 tgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatac 19127183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 24431683 - 24431630
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| |||||||  |||||| ||||||||| ||||||||||||||    
T  24431683 tgatatttgtacaaccactttaagacaactttttgacaattttctctctcatac 24431630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 28903997 - 28904050
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| |||| || ||||||| ||| ||||||||||||||||||||    
T  28903997 tgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatac 28904050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 28940392 - 28940445
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| |||| || ||||||| ||| ||||||||||||||||||||    
T  28940392 tgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatac 28940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 31708376 - 31708429
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  31708376 tgatatttgtacaaccattttataacaactttttgacaactttctctctcatac 31708429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 12718445 - 12718393
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||| |||||||||    
T  12718445 tgatatttgtacaaccaatttgtgacaactttttgacaactttatctctcata 12718393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 24267712 - 24267659
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24267712 tgatatatgtacatccactttttgacaacttttagacaactttctctctcatac 24267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 23761065 - 23761118
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||    
T  23761065 tgatatatgtacatcgattttttgataactttttgacaactttctctctcatac 23761118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 40842411 - 40842464
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||  ||||||||||||||||||||||||    
T  40842411 tgatatttgtacatccactttgtgacaatcttttgacaactttctctctcatac 40842464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 28824509 - 28824561
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  28824509 tgatatttgtacaaccactttctgacaactttttgacaactttctctctcata 28824561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 18067949 - 18067900
Alignment:
Q  230 tatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||||| ||||| ||||||| ||| |||||||||||||||||||||||    
T  18067949 tatatgtaaatccaatttttgataactttttgacaactttctctctcata 18067900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 19426586 - 19426639
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  19426586 tgatatttgtacaaccattttgtgacaactttttgacaactttctctctcatac 19426639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 45607030 - 45607083
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||| ||||| ||||||| | ||||||||||||||||||||||    
T  45607030 tgatatttgtacatctactttgtgacaacttcttgacaactttctctctcatac 45607083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 48866995 - 48866942
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||||||||||| |||||    
T  48866995 tgatatttgtacagccactttgtgacaactttttgacaactttctctcacatac 48866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 156047 - 155993
Alignment:
Q  227 tgatatatgtacatccactttttgacaacat-tttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| | || ||||||||||||||||||||    
T  156047 tgatatttgtacatccactttgtgacaacttcttagacaactttctctctcatac 155993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 2008923 - 2008869
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  2008923 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 2008869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 46022540 - 46022494
Alignment:
Q  234 tgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  46022540 tgtacaaccactttatgacaactttttgacaacattctctctcatac 46022494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 47905181 - 47905131
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctca 277  Q
    |||||| |||||| ||| |||||||||| |||| |||||||||||||||||    
T  47905181 tgatatttgtacaaccattttttgacaatatttagacaactttctctctca 47905131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 2790183 - 2790236
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||  ||||||||||||||||||||||||    
T  2790183 tgatatttgtacaaccactttgtaacaattttttgacaactttctctctcatac 2790236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 5378633 - 5378686
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||  ||||| ||||||||||||||||||||||||    
T  5378633 tgatatttgtacaaccatttttatacaactttttgacaactttctctctcatac 5378686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 5724044 - 5724097
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  5724044 tgatatttgtacaaccactttattacaactttttaacaactttctctctcatac 5724097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 9055273 - 9055326
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  9055273 tgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatac 9055326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 28596912 - 28596961
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctc 276  Q
    |||||| |||||| ||||||| ||||||| |||| |||||||||||||||    
T  28596912 tgatatttgtacaaccactttgtgacaacttttttacaactttctctctc 28596961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 31436425 - 31436478
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||||||||| ||||||||| ||| ||||||||||    
T  31436425 tgatatttgtacaaccattttttgacaactttttgacaattttttctctcatac 31436478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 33684686 - 33684739
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  33684686 tgatatttgtacaaccactttctcacaacttttttacaactttctctctcatac 33684739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 40693593 - 40693540
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| | | ||||||||||| ||| ||||||||||||||||||||    
T  40693593 tgatatttgtacaactattttttgacaacttttagacaactttctctctcatac 40693540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 41815151 - 41815204
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||| ||| | ||||  ||||||||||||||||||||||||    
T  41815151 tgatatatgtacaaccaatttctaacaattttttgacaactttctctctcatac 41815204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 46651678 - 46651731
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| | ||||| ||||||  |||| |||||||||||||||||||    
T  46651678 tgatatatgtacaactactttatgacaattttttaacaactttctctctcatac 46651731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 24611850 - 24611903
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  24611850 tgatatatgtacatccactttttaacaactttttgacaactttctctctcatac 24611903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 1724296 - 1724244
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  1724296 tgatatatgtacatccactttttgacaa-tttttgacaactttctctctcatac 1724244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 24910199 - 24910146
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||||||||||||    
T  24910199 tgatatatgtacatccactttttaacaattttttgacaattttctctctcatac 24910146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 50226944 - 50226891
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  50226944 tgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatac 50226891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 33422284 - 33422231
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  33422284 tgatatctgtacaaccactttattacaactttttgacaactttctctctcatac 33422231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 37843497 - 37843444
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| | ||||||||||||| || |||||||||||||||||||||    
T  37843497 tgatatttgtacaactactttttgacaactttgtgacaactttctctctcatac 37843444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 39010820 - 39010873
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  39010820 tgatatttgtacagccactttctcacaactttttgacaactttctctctcatac 39010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 20288405 - 20288351
Alignment:
Q  227 tgatatatgtacatccactttttgacaacatttt-gacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| |||| ||||||||||||||||||||    
T  20288405 tgatatttgtacatccaatttgtgacaactttttagacaactttctctctcatac 20288351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 22389591 - 22389537
Alignment:
Q  227 tgatatatgtaca-tccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||||||| ||||||    
T  22389591 tgatatatgtacaatccactttgtgacaactttttaacaactttctctttcatac 22389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 27742623 - 27742677
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  27742623 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 27742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 33675913 - 33675959
Alignment:
Q  234 tgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||||||||||| || | |||||||||||||||||||    
T  33675913 tgtacaaccactttttgacaactttgtaacaactttctctctcatac 33675959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 48858829 - 48858883
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  48858829 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 48858883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 366663 - 366716
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| | |||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  366663 tgatatttatacaaccactttctgataactttttgacaactttctctctcatac 366716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 4604426 - 4604475
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctc 276  Q
    |||||| || ||| |||||||| |||||||||||||||||| ||||||||    
T  4604426 tgatatttgaacaaccacttttagacaacattttgacaactctctctctc 4604475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 8464578 - 8464525
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||| ||||||||||||||    
T  8464578 tgatatttgtacaaccactttattacaactttttgacaattttctctctcatac 8464525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11097949 - 11097896
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| |||  |||||||||||||||||||    
T  11097949 tgatatttgtacatccattttgtgacaacttttgaacaactttctctctcatac 11097896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 15061851 - 15061904
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||| | ||||||| ||||||| ||||||||| ||||||||||||||    
T  15061851 tgatatttgtataaccactttgtgacaactttttgacaattttctctctcatac 15061904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 16658444 - 16658497
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| |||| || ||||||| ||| ||||||||||||||||||||    
T  16658444 tgatatttgtacaaccacattgtgacaacttttagacaactttctctctcatac 16658497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 27810312 - 27810259
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  27810312 tgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatac 27810259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 28253021 - 28253074
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||| ||||||||||||||    
T  28253021 tgatatttgtacaaccactttctcacaactttttgacaattttctctctcatac 28253074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 30530464 - 30530411
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  30530464 tgatatttgtacaaccactttattacaactttttaacaactttctctctcatac 30530411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 31436826 - 31436879
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||| ||||||||||||||    
T  31436826 tgatatttgtacaaccactttctcacaactttttgacaattttctctctcatac 31436879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 36231771 - 36231718
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| |||||| |||| ||||||||||||||||||||    
T  36231771 tgatatttgtacaaccattttgtgacaatatttagacaactttctctctcatac 36231718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 44112460 - 44112513
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||  ||||||||||||||||||||||||    
T  44112460 tgatatttgtacaaccactttattacaattttttgacaactttctctctcatac 44112513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 44641968 - 44641915
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||  ||||||||||||||||||||||||    
T  44641968 tgatatttgtacaaccactttattacaattttttgacaactttctctctcatac 44641915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 48872385 - 48872438
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||| |||||| |||||||||||||    
T  48872385 tgatatttgtacaaccactttatgacaacttttagacaaccttctctctcatac 48872438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 49425744 - 49425796
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  49425744 tgatatttgtacaaccactttgtgacaac-ttttgacaactttatctctcatac 49425796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Original strand, 5975554 - 5975582
Alignment:
Q  227 tgatatatgtacatccactttttgacaac 255  Q
    |||||||||||||||||||||||||||||    
T  5975554 tgatatatgtacatccactttttgacaac 5975582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9882724 - 9882672
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| | | ||| ||||||||||||||||||||| |||||||||    
T  9882724 tgatatttgtacaactattttgtgacaacattttgacaactttatctctcata 9882672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 12489646 - 12489594
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||||||||||||   ||||| ||||  |||||||||||||||||||||||    
T  12489646 tgatatatgtacatctgttttttaacaattttttgacaactttctctctcata 12489594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 18541116 - 18541064
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||| ||| | ||||| |||||||||||||||||||||||    
T  18541116 tgatatttgtacaaccattttctaacaactttttgacaactttctctctcata 18541064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 24806273 - 24806233
Alignment:
Q  241 ccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  24806273 ccactttttgacaacttttgtgacaactttctctctcatac 24806233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 11644 - 11697
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  11644 tgatatatctacatccactttttgacaactttttaacaactttctctctcatac 11697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11879555 - 11879502
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  11879555 tgatatatgtacgtccactttgtgacaactttttgacaactttctctctcatac 11879502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11896971 - 11896918
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  11896971 tgatatatgtacgtccactttgtgacaactttttgacaactttctctctcatac 11896918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 21418657 - 21418604
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  21418657 tgatatttgtacaaccactttctgacaaccttttgacaactttctctctcatac 21418604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 40102029 - 40102082
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  40102029 tgatatttgtacaaccactttttcacaactttttgacaactttctctctcatac 40102082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 45101402 - 45101455
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  45101402 tgatatttgtacaaccactttgtgacaactttttgacaactttctctctcatac 45101455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 6105501 - 6105448
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  6105501 tgatatttgtacaaccatttttttacaactttttgacaactttctctctcatac 6105448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 7678738 - 7678791
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||||||||| || |||||| ||||||||||||||    
T  7678738 tgatatttgtacaaccactttttgacaactttgtgacaattttctctctcatac 7678791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11223924 - 11223871
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  11223924 tgatatttgtacatccattttgtgacaacttcttgacaactttctctctcatac 11223871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 12659058 - 12659111
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||| ||||| ||||||||||||||||||||||||    
T  12659058 tgatatttgtacaaccaatttttaacaactttttgacaactttctctctcatac 12659111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 27630903 - 27630956
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  27630903 tgatatttgtacatccattttatgacaattttttgacaactttctctctcatac 27630956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 32174968 - 32175013
Alignment:
Q  235 gtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  32174968 gtacatccactttgtgacaattttttgacaactttctctctcatac 32175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 35634034 - 35633982
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| | |||| ||||||| ||||||| |||||||||||||||||||||||    
T  35634034 tgatatttctacaaccactttctgacaactttttgacaactttctctctcata 35633982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 1068612 - 1068666
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  1068612 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 1068666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 7280020 - 7279978
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaacttt 269  Q
    |||||| |||||||||||||| |||||||||||| ||||||||    
T  7280020 tgatatttgtacatccactttgtgacaacattttaacaacttt 7279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 10653846 - 10653795
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||| |||||||||||||| ||||  ||||||||||||||| ||||||||    
T  10653846 tgatatatatacatccactttttaacaa--ttttgacaactttctttctcatac 10653795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 12490830 - 12490784
Alignment:
Q  235 gtacatccactttttgacaacatttt-gacaactttctctctcatac 280  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  12490830 gtacatccactttgtgacaactttttagacaactttctctctcatac 12490784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 3756907 - 3756960
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||| ||||||    
T  3756907 tgatatttgtacaaccactttattacaactttttgacaactttctctttcatac 3756960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 10553148 - 10553095
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  |||||||||||||||| |||||||    
T  10553148 tgatatttgtacaaccactttctgacaattttttgacaactttctccctcatac 10553095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 13884225 - 13884172
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||  || ||||||||||| || |||||||||||||||||||||    
T  13884225 tgatatttgtacaatcattttttgacaactttgtgacaactttctctctcatac 13884172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 21648996 - 21648943
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| |||| |||||||||||||||||||    
T  21648996 tgatatttgtacaaccaatttgtgacaactttttaacaactttctctctcatac 21648943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 22852904 - 22852851
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| | ||||||||||| ||||||||||    
T  22852904 tgatatttgtacaaccactttgtgacaacttcttgacaactttttctctcatac 22852851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 27836186 - 27836239
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||||| |||| ||||||    
T  27836186 tgatatttgtacaaccactttgtgacaactttttgacaacttactctttcatac 27836239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 28473610 - 28473557
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||  |||| ||||||| |||||||||||||||||    
T  28473610 tgatatttgtacaaccacttttgtacaatattttgataactttctctctcatac 28473557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 34473955 - 34474008
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||| |||||| ||||||  ||||||||| ||||||||||||||    
T  34473955 tgatatttgtacattcactttgtgacaatcttttgacaattttctctctcatac 34474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 42716326 - 42716379
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||| | ||  ||||||||||||||||||||||||    
T  42716326 tgatatttgtacaaccactttttcataattttttgacaactttctctctcatac 42716379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 324148 - 324120
Alignment:
Q  227 tgatatatgtacatccactttttgacaac 255  Q
    |||||||||||||||||||||||||||||    
T  324148 tgatatatgtacatccactttttgacaac 324120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 34996425 - 34996373
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| | ||||  |||||||||||||||||||||||    
T  34996425 tgatatttgtacaaccactttattacaattttttgacaactttctctctcata 34996373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 43290930 - 43290878
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||||||||||| ||||||| |||| | || |||||||||||||    
T  43290930 tgatatttgtacatccactttatgacaactttttaataattttctctctcata 43290878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 18792497 - 18792444
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  18792497 tgatatatctacatccactttttgacaactttttaacaactttctctctcatac 18792444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 21506342 - 21506395
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  21506342 tgatatttgtacaaccattttttgacaactttttgacaactttctctctcatac 21506395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 29383563 - 29383616
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29383563 tgatatttgtacaaccactttctgacaactttttgacaactttctctctcatac 29383616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 31480899 - 31480846
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  31480899 tgatatttgtacaaccactttctgacaacattttgacaactttttctctcatac 31480846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 8395348 - 8395401
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  8395348 tgatatttgtacaaccactttctcacaactttttgacaactttctctctcatac 8395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 9954554 - 9954607
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||||||||||||||    
T  9954554 tgatatttgtacaaccaatttgtgacaactttttgacaactttctctctcatac 9954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 29643482 - 29643430
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    ||||||||||||| ||| ||| ||||||  |||||||||||||||||||||||    
T  29643482 tgatatatgtacaaccattttctgacaattttttgacaactttctctctcata 29643430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 32853207 - 32853156
Alignment:
Q  229 atatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||| ||||||  |||||||||||||| || |||||||||||||||||||||    
T  32853207 atatttgtacaatcactttttgacaactttgtgacaactttctctctcatac 32853156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 33712326 - 33712380
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  33712326 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 33712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 3821384 - 3821437
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||  ||||||||||||||||||||||||    
T  3821384 tgatatttgtacaaccactttattacaattttttgacaactttctctctcatac 3821437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 8778937 - 8778884
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||| ||||| |||||||||||||||||| |||||    
T  8778937 tgatatttgtacaaccattttttaacaactttttgacaactttctctcacatac 8778884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 14094917 - 14094970
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  14094917 tgatatttgtacagccaatttctaacaactttttgacaactttctctctcatac 14094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 19789141 - 19789088
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  19789141 tgatatttgtacaaccattttattacaactttttgacaactttctctctcatac 19789088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 28965905 - 28965852
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  28965905 tgatatttgtacaaccattttgttacaactttttgacaactttctctctcatac 28965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 50159001 - 50159052
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcat 278  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  50159001 tgatatatgtacatccactttttgacaactttttaacaactttctttctcat 50159052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 46566935 - 46566988
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||    
T  46566935 tgatatttgtacatccactttgtgacaacttttagacaactttctctctcatac 46566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 46794566 - 46794513
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  46794566 tgatatttgtacaaccactttctgacaactttttgacaactttctctctcatac 46794513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 47540141 - 47540194
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||| ||||  |||||| |||||||||||||||||    
T  47540141 tgatatatgtacatccactttttaacaattttttgataactttctctctcatac 47540194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 52392290 - 52392237
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  52392290 tgatatttgtacatccactttgtgacaactttttgacaactttatctctcatac 52392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 3664825 - 3664772
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||| ||||| ||||| |||||||||||||||||  |||||||||||||    
T  3664825 tgatatatgcacatctactttgtgacaacattttgacaatcttctctctcatac 3664772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 4896565 - 4896512
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||||||||||| |||||    
T  4896565 tgatatttgtacaaccactttgtgacaactttttgacaactttctctcgcatac 4896512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 6953453 - 6953400
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| |||| |||||||| ||||||||||    
T  6953453 tgatatttgtacatccactttgtgacaactttttaacaactttatctctcatac 6953400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11064154 - 11064101
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||| |||||||||||||    
T  11064154 tgatatttgtacaaccactttgtgacaactttttgacaacattctctctcatac 11064101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 23347781 - 23347834
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| |||| |||| ||||||||||||||    
T  23347781 tgatatttgtacatccactttgtgacaactttttaacaattttctctctcatac 23347834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 24772677 - 24772730
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| |||||||||| |||||||||||||    
T  24772677 tgatatttgtacatccattttatgacaactttttgacaaccttctctctcatac 24772730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 34116605 - 34116552
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  34116605 tgatatttgtacaaccactttgtgacaactttttgacaattttctctctcatac 34116552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 53583193 - 53583140
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  53583193 tgatatttgtacaaccactttctcacaactttttgacaactttctctctcatac 53583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 5932829 - 5932775
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| || ||| ||||||||||||||| ||| |||||||||||||||||||||    
T  5932829 tgatatttgaacaaccactttttgacaacttttgtgacaactttctctctcatac 5932775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 1031761 - 1031814
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||| ||| | ||||||||||||||||||||||    
T  1031761 tgatatttgtacaaccactttgtgataacttcttgacaactttctctctcatac 1031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 1562601 - 1562548
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  1562601 tgatatttgtacaaccattttctaacaactttttgacaactttctctctcatac 1562548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 15596402 - 15596455
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| | ||||||||| ||||||||||||    
T  15596402 tgatatttgtacaaccactttgtgacaacttcttgacaactctctctctcatac 15596455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 17363236 - 17363289
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||  |||||| | ||||| ||||||||||||||||||||||||    
T  17363236 tgatatttgtacaatcactttattacaactttttgacaactttctctctcatac 17363289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 25725759 - 25725706
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||| ||||||    
T  25725759 tgatatttgtacaaccactttctaacaactttttgacaactttctctttcatac 25725706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 36792338 - 36792391
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| | ||||| |||| |||||||| ||||||||||    
T  36792338 tgatatttgtacatccactttataacaacttttttacaactttttctctcatac 36792391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 39010202 - 39010149
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| |||||||| |||||||||||||||    
T  39010202 tgatatttgtacaaccattttgtgacaactttttgacagctttctctctcatac 39010149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 39068015 - 39067978
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgaca 264  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  39068015 tgatatatgtacatccattttttgacaactttttgaca 39067978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 39844323 - 39844270
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||  ||||||||||||||| |||| |||||||||    
T  39844323 tgatatctgtacaaccacttttgtacaacattttgacaattttccctctcatac 39844270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 40409231 - 40409178
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||| ||||| |||||   ||||||||||||||||||||||||    
T  40409231 tgatatttgtacatctactttgtgacagttttttgacaactttctctctcatac 40409178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 44165915 - 44165968
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| |||||||  |||||  ||||||||||||||||||||||||    
T  44165915 tgatatttgtacaaccactttgcgacaattttttgacaactttctctctcatac 44165968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 45277146 - 45277093
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  45277146 tgatatttgtacaaccactttctcacaacttttttacaactttctctctcatac 45277093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 51296254 - 51296201
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||  |||||| ||||||| |||||||||||||||||| |||||    
T  51296254 tgatatttgtacaatcactttatgacaactttttgacaactttctctcacatac 51296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 55595955 - 55596008
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  55595955 tgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatac 55596008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 12694493 - 12694441
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||| ||| ||||||| |||||| ||||||||||||||||    
T  12694493 tgatatttgtacaaccattttgtgacaactttttgataactttctctctcata 12694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 31147237 - 31147289
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| | ||||  |||||||||||||||||||||||    
T  31147237 tgatatttgtacaaccactttattacaattttttgacaactttctctctcata 31147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 38844555 - 38844507
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctct 275  Q
    |||||| |||||| ||||||| | ||||| |||||||||||||||||||    
T  38844555 tgatatttgtacaaccactttctcacaactttttgacaactttctctct 38844507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 51039181 - 51039129
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| | ||||| ||||||| ||||||||||||| |||||||||    
T  51039181 tgatatttgtacaactactttgtgacaactttttgacaactttatctctcata 51039129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 27345 - 27398
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||| ||| ||||||  ||||||||||||||||||||||||    
T  27345 tgatatatgtacatccattttgtgacaattttttgacaactttctctctcatac 27398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 6126460 - 6126513
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||||||||||| ||| || ||||||| ||||||||||||||||||||||||    
T  6126460 tgatatatgtacattcacattctgacaactttttgacaactttctctctcatac 6126513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 26279890 - 26279943
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  26279890 tgatatttgtacaaccactttctgacaactttttgacaactttctctctcatac 26279943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 32457820 - 32457767
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||||||||| || |||||||||||||||||||||    
T  32457820 tgatatttgtacaaccactttttgacaactttgtgacaactttctctctcatac 32457767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 42104471 - 42104524
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| || |||||    
T  42104471 tgatatatgtacatccactttttgacaactttttaacaactttctttcacatac 42104524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 108437 - 108490
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  ||||||||||||||||||||||||    
T  108437 tgatatttgtacaaccactttgtgacaattttttgacaactttctctctcatac 108490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 1901991 - 1901938
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  1901991 tgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatac 1901938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 1911437 - 1911384
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  1911437 tgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatac 1911384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 8066361 - 8066414
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  8066361 tgatatttgtacaaccactttctcacaactttttgacaactttctctctcatac 8066414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 11173464 - 11173517
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  11173464 tgatatttgtacaaccactttgtgacaactttttgacaactttctttctcatac 11173517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 14207381 - 14207434
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  14207381 tgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatac 14207434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 14215129 - 14215182
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  14215129 tgatatttgtacaaccactttgtgataaccttttgacaactttctctctcatac 14215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 20380954 - 20380901
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| | ||||||||||||||||||||||    
T  20380954 tgatatttgtacaaccactttgtgacaacttcttgacaactttctctctcatac 20380901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 24537225 - 24537278
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| |||||||||| |||| ||||||||    
T  24537225 tgatatttgtacatccactttgtgacaactttttgacaaccttctttctcatac 24537278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 35425737 - 35425684
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||||||| | ||||| ||||||||||||| ||||||||||    
T  35425737 tgatatatgtacaaccactttattacaactttttgacaactttatctctcatac 35425684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 36869902 - 36869849
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  36869902 tgatatttgtacaaccattttttgacaacttttagacaactttctctctcatac 36869849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 37303139 - 37303086
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  37303139 tgatatttgtacaaccactttctcacaactttttgacaactttctctctcatac 37303086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 43900822 - 43900769
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  43900822 tgatatttgtacaaccactttattacaactttttgacaactttctctctcatac 43900769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 44334866 - 44334813
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  44334866 tgatatttgtacaaccactttattacaactttttgacaactttctctctcatac 44334813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 48649586 - 48649639
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||||||||    
T  48649586 tgatatttgtacaaccactttctaacaactttttgacaactttctctctcatac 48649639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 51464337 - 51464284
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  51464337 tgatatttgtacaaccactttgtgacaactttttgacaactttatctctcatac 51464284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 18169163 - 18169215
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| ||||||| ||||||||| |||||||||||||    
T  18169163 tgatatttgtacaaccactttgtgacaactttttgacaaatttctctctcata 18169215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 22813078 - 22813130
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| ||||||| |||||||||||||||||| ||||    
T  22813078 tgatatttgtacaaccactttctgacaactttttgacaactttctctcccata 22813130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 28300713 - 28300661
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| ||||||| |||| ||||||||||||||||||    
T  28300713 tgatatttgtacaaccactttatgacaactttttaacaactttctctctcata 28300661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 7294165 - 7294111
Alignment:
Q  227 tgatatatgtacatccactttttgacaacat-tttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| | || ||||||||||||||||||||    
T  7294165 tgatatttgtacatccactttgtgacaacttcttagacaactttctctctcatac 7294111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 32717649 - 32717603
Alignment:
Q  234 tgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  32717649 tgtacaaccactttgtgacaactttttgacaactttctatctcatac 32717603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 48353002 - 48353056
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||||| ||||| ||| |||||||||||||||||||||    
T  48353002 tgatatttgtacatccattttttaacaacttttgtgacaactttctctctcatac 48353056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 462466 - 462413
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| ||| ||||||||||||||||||||    
T  462466 tgatatttgtacaaccattttgtgacaacttttagacaactttctctctcatac 462413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 9027879 - 9027932
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||| ||| |||||| |||||||||||||||||    
T  9027879 tgatatttgtacaaccactttgtgataactttttgataactttctctctcatac 9027932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 20215954 - 20216007
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  ||| ||||||||||||||||||||    
T  20215954 tgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatac 20216007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 34733356 - 34733303
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||||| || |||||    
T  34733356 tgatatttgtacaaccactttgtgacaactttttgacaactttctttcacatac 34733303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 35272033 - 35272086
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||| ||| ||||||    
T  35272033 tgatatttgtacaaccactttgtgacaaccttttgacaactttatctttcatac 35272086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 37303389 - 37303442
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| |  |||| ||||||||||||||||||||||||    
T  37303389 tgatatttgtacaaccactttctcgcaactttttgacaactttctctctcatac 37303442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 39540241 - 39540294
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||| ||||||||||||||    
T  39540241 tgatatttgtacaaccactttctcacaactttttgacaattttctctctcatac 39540294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 41877676 - 41877623
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||| | ||||||||||||| ||||||||||    
T  41877676 tgatatttgtacaaccactttgtgacacccttttgacaactttttctctcatac 41877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 2482739 - 2482687
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||||||| ||| ||||||| |||  ||||||||||||||||||    
T  2482739 tgatatttgtacatccattttgtgacaacttttgaacaactttctctctcata 2482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 11335367 - 11335315
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||| ||| | ||||| |||||||||||||||||||||||    
T  11335367 tgatatttgtacaaccattttctaacaactttttgacaactttctctctcata 11335315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 46003711 - 46003763
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||||||||||| | ||||  |||||||||||||||||| ||||    
T  46003711 tgatatttgtacatccactttcttacaatcttttgacaactttctctcccata 46003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 49457571 - 49457623
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||||||||||||||    |||||||||||||||||    
T  49457571 tgatatttgtacaaccactttttgacaacattgatgcaactttctctctcata 49457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 5455518 - 5455465
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  5455518 tgatatttgtacatccactttgtgacaaccttttgacaactttctctcttatac 5455465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11229386 - 11229333
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||||||| ||||||| | ||||||||||||||||||||||    
T  11229386 tgatatttgtacatccactttgtgacaacttcttgacaactttctctctcatac 11229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9449480 - 9449428
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  9449480 tgatatatgtacattcactttttgataactttttaacaactttctctctcata 9449428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 36376914 - 36376862
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||||  |||||||||||||||||||||||||||||    
T  36376914 tgatatttgtacaaccacttttgtacaacattttgacaactttctctctcata 36376862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 1889153 - 1889206
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  ||||||||||||||||||||||||    
T  1889153 tgatatttgtacaaccactttctgacaattttttgacaactttctctctcatac 1889206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 2308387 - 2308334
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||||||||| ||||||||||||| ||||||||||    
T  2308387 tgatatttgtacaaccaatttttgacaaccttttgacaactttatctctcatac 2308334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 4723572 - 4723625
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||| ||||| ||||| |||| |||||||||||||||||||    
T  4723572 tgatatatgtacaaccattttttaacaacttttttacaactttctctctcatac 4723625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 13711067 - 13711120
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||||| ||| || |||||||||||||||||||||    
T  13711067 tgatatttgtacaaccactttttgataactttgtgacaactttctctctcatac 13711120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 30856813 - 30856866
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  30856813 tgatatttgtacaaccactttgtgacaacttttagacaactttctctctcatac 30856866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 32688609 - 32688556
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  ||||||||||||||||||||||||    
T  32688609 tgatatttgtacaaccactttctgacaattttttgacaactttctctctcatac 32688556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 42141659 - 42141606
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||||||||||| ||| ||||| ||||| ||| ||||||||||||||||||||    
T  42141659 tgatatatgtacaaccattttttcacaacttttggacaactttctctctcatac 42141606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 278
Target Start/End: Complemental strand, 5067711 - 5067660
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcat 278  Q
    |||||| |||||||| ||||| ||||||| |||||| |||||||||||||||    
T  5067711 tgatatttgtacatctactttgtgacaactttttgataactttctctctcat 5067660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 23690567 - 23690521
Alignment:
Q  235 gtacatccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  23690567 gtacaaccactttttgacaacttttatgacaactttctctctcatac 23690521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 546450 - 546397
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  546450 tgatatttgtacaaccactttattacaactttttaacaactttctctctcatac 546397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 4738637 - 4738584
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||||| |||| ||||||    
T  4738637 tgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatac 4738584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 7086189 - 7086136
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||  ||||||| | ||||| ||||||||||||||||||||||||    
T  7086189 tgatatttgtaccgccactttctcacaactttttgacaactttctctctcatac 7086136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 7498056 - 7498003
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  7498056 tgatatttgtacaaccattttattacaactttttgacaactttctctctcatac 7498003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 14797715 - 14797662
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  14797715 tgatatttgtacaaccaatttctaacaactttttgacaactttctctctcatac 14797662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 15283315 - 15283262
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||  ||| ||||||||||||||||||||    
T  15283315 tgatatttgtacaaccactttgtgacaatttttagacaactttctctctcatac 15283262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 23880101 - 23880154
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||||| |||||||||||||||||    
T  23880101 tgatatttgtacaaccactttctcacaactttttgataactttctctctcatac 23880154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 29168731 - 29168784
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||||||||||| |||  |||||||||||||||||||    
T  29168731 tgatatttgtacaaccattttttgacaacttttgcacaactttctctctcatac 29168784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 31296910 - 31296857
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| ||||||| ||||||||||||| ||||||||||    
T  31296910 tgatatttgtacaaccattttgtgacaacgttttgacaactttatctctcatac 31296857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 31635875 - 31635822
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||| ||| | ||||| ||||||||||||||||||||||||    
T  31635875 tgatatttgtacaaccattttctaacaactttttgacaactttctctctcatac 31635822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 32750004 - 32750057
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||||| ||||| |||||||||||||| |||| ||||    
T  32750004 tgatatttgtacaaccactttttcacaactttttgacaactttccctctgatac 32750057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 33296136 - 33296083
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||||||||||| |||| ||||||    
T  33296136 tgatatttgtacaaccactttgtgacaactttttgacaacttcctctatcatac 33296083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 34249586 - 34249639
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| ||||||||||||||||||| ||||    
T  34249586 tgatatttgtacaaccactttctcacaactttttgacaactttctctcttatac 34249639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 36435687 - 36435740
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||| ||||||||||||| |||||    
T  36435687 tgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatac 36435740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 36587533 - 36587480
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| || ||| ||| ||||||||||  ||||||||||||||||||||||||    
T  36587533 tgatatttgaacaaccattttttgacaattttttgacaactttctctctcatac 36587480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 42554782 - 42554835
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||| |||| |||||||||||||||||||    
T  42554782 tgatatttgtacaaccactttattacaacttttttacaactttctctctcatac 42554835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 42665877 - 42665824
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| ||||||  |||||| | ||||| ||||||||||||||||||||||||    
T  42665877 tgatatttgtacaatcactttattacaactttttgacaactttctctctcatac 42665824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 4842584 - 4842532
Alignment:
Q  228 gatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    ||||| ||||||  |||||| ||||||| ||| ||||||||||||||||||||    
T  4842584 gatatttgtacaatcactttgtgacaacttttagacaactttctctctcatac 4842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 37316866 - 37316826
Alignment:
Q  241 ccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  37316866 ccactttttgacaacttttgtgacaactttctctctcatac 37316826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 6433 - 6486
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||||| ||| ||||||| |||||||||| |||||||||||||    
T  6433 tgatatttgtacatccattttatgacaactttttgacaacattctctctcatac 6486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 440724 - 440777
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| | ||||| ||||||| ||| ||||||||||||||||||||    
T  440724 tgatatttgtacaactactttatgacaacttttagacaactttctctctcatac 440777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 15599 - 15549
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctca 277  Q
    |||||| |||||| ||||||| ||||||| ||||||||| |||||||||||    
T  15599 tgatatttgtacaaccactttgtgacaactttttgacaattttctctctca 15549  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 11601 - 11548
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||||| ||||| ||||||| | ||||||| ||||||||||||||    
T  11601 tgatatttgtacatctactttgtgacaacttcttgacaattttctctctcatac 11548  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 34414 - 34467
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| | | ||||||||||| || |||||||||||||||||||||    
T  34414 tgatatttgtacaactattttttgacaactttgtgacaactttctctctcatac 34467  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 113631 - 113684
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| ||||||| |||| ||||||||||||| |||||    
T  113631 tgatatttgtacaaccactttgtgacaactttttaacaactttctctcacatac 113684  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 199272 - 199325
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcatac 280  Q
    |||||| |||||| ||||||| | ||||  ||||||||||||||||||||||||    
T  199272 tgatatttgtacaaccactttattacaattttttgacaactttctctctcatac 199325  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 280
Target Start/End: Original strand, 10956 - 10996
Alignment:
Q  241 ccactttttgacaacattt-tgacaactttctctctcatac 280  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  10956 ccactttttgacaacttttgtgacaactttctctctcatac 10996  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 219729 - 219685
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttct 271  Q
    |||||| |||||| ||||||| ||||||| |||||||||||||||    
T  219729 tgatatttgtacaaccactttgtgacaactttttgacaactttct 219685  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 263760 - 263708
Alignment:
Q  227 tgatatatgtacatccactttttgacaacattttgacaactttctctctcata 279  Q
    |||||| |||||| ||||||| | ||||| |||| ||||||||||||||||||    
T  263760 tgatatttgtacaaccactttctaacaactttttaacaactttctctctcata 263708  T

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