View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2492_low_1 (Length: 580)
Name: NF2492_low_1
Description: NF2492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2492_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 525; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 16 - 564
Target Start/End: Original strand, 971726 - 972274
Alignment:
| Q |
16 |
attaagggcatactcaataatctcagtaccaatttctgcccaataggattgatagaacagggcaggtaaaccatctggtccaggggcagctgaacttttc |
115 |
Q |
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| T |
971726 |
attaagggcatactcaataatctcagtaccaatttctgcccaataggattgatagaacagggcaggtaaaccatctggtccaggggcagctgaacttttc |
971825 |
T |
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| Q |
116 |
atctgtctaatagcctcaaaaacctcggtagcagtgaaatcttgctagaggtactcatgcatatcaggcttgattatatttttaacaacttcaatagtat |
215 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
971826 |
atctgtctaatagcctcaaaaacctcagtagcagtgaaatcttgctagaggtactcatgcatatcaggcttgattatatttttaacaacttcaatagtat |
971925 |
T |
|
| Q |
216 |
cctgcatgttagtggggtttgaagtagcaaaaatattagtgaaataatctataaaaatactgttaatatgattgatgtcactccaacatctcccatcaac |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
971926 |
cctgcatgttagtggggtttgaagtagcaaaaatattagtgaaataatctataaaaatactgttaatatgattgatgtcactccaacatctcccatcaac |
972025 |
T |
|
| Q |
316 |
atcctgaatactcttgatagtatttctcttatttctctgagtagcttttttgtgaaagtatttggaatttttatctcatgcttgaagccagtgagatttt |
415 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |
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| T |
972026 |
atcctgaatactcttgatagtatttctcttatttctctgagtagcttttttgtgaaagtatctggaatttttatctcgtgcttgaagccagtgagatttt |
972125 |
T |
|
| Q |
416 |
gctctctgagcccaccaaagttcatcctctttcatagtatcatcaagaagcttctctttttctttaatcttttgaagagtatatacattagggatagact |
515 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
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| T |
972126 |
gctctctgagcccaccaaagttcatcctctttcgtagtatcatcaagaagcttctctttttctttaatcttttggagagtatatacatcagggatagact |
972225 |
T |
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| Q |
516 |
tcttgagtactttgagctcttgttgaattttgttaattctcctaggaac |
564 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
972226 |
tcttgagtactttgagctcttgttgaattttgttaattctcctaggaac |
972274 |
T |
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