View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2493_high_15 (Length: 232)
Name: NF2493_high_15
Description: NF2493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2493_high_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 232
Target Start/End: Complemental strand, 7430744 - 7430522
Alignment:
| Q |
10 |
ataatactctgttatatcattcagtccagttcttcctcaaatctcaaccatcacattcatatttcatccaccaccacgcgctactcaattctcacgcgcc |
109 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
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| T |
7430744 |
ataatattctgttatatcattcagtccagttcttcctcaaatctcaaccatcacattcacatttcctccaccaccacgcgctactcaattctcacgcgcc |
7430645 |
T |
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| Q |
110 |
tccgatcaaaaccaatgcgccaccactgatgcgcatggagataacaccaacaaccttcgcatcccacagttactccgaccttccctccgccgcatccatg |
209 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7430644 |
tccgattaaaaccaatgcgccaccactgatgcgcatggagataacaccaacaaccttcgcatcccacagttactccgaccttccctccgccgcatccatg |
7430545 |
T |
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| Q |
210 |
ccgactcgtcctatcagagttat |
232 |
Q |
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||||||||||||||||||||||| |
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| T |
7430544 |
ccgactcgtcctatcagagttat |
7430522 |
T |
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