View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2493_low_15 (Length: 242)

Name: NF2493_low_15
Description: NF2493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2493_low_15
NF2493_low_15
[»] chr4 (83 HSPs)
chr4 (3-212)||(47772995-47773203)
chr4 (3-161)||(33790707-33790865)
chr4 (3-212)||(11907575-11907783)
chr4 (3-161)||(17114427-17114585)
chr4 (3-161)||(38502458-38502616)
chr4 (3-144)||(52859775-52859916)
chr4 (3-149)||(2066788-2066934)
chr4 (3-161)||(3689549-3689707)
chr4 (11-161)||(6609748-6609898)
chr4 (3-155)||(17237272-17237424)
chr4 (11-155)||(34360648-34360792)
chr4 (3-150)||(32884799-32884946)
chr4 (27-161)||(35380333-35380467)
chr4 (32-161)||(21240709-21240838)
chr4 (8-149)||(38405083-38405224)
chr4 (8-161)||(49428323-49428476)
chr4 (3-155)||(47464341-47464493)
chr4 (11-149)||(11288614-11288751)
chr4 (3-149)||(22130042-22130192)
chr4 (3-212)||(49175910-49176119)
chr4 (3-155)||(43237236-43237388)
chr4 (3-150)||(40122830-40122977)
chr4 (8-149)||(5841408-5841550)
chr4 (11-149)||(25233180-25233318)
chr4 (26-155)||(6643659-6643788)
chr4 (3-155)||(7061640-7061792)
chr4 (8-155)||(52247409-52247556)
chr4 (13-155)||(44536182-44536323)
chr4 (8-213)||(16821312-16821517)
chr4 (49-161)||(26147637-26147750)
chr4 (3-155)||(53346752-53346904)
chr4 (35-161)||(461945-462071)
chr4 (41-155)||(36985779-36985893)
chr4 (12-149)||(35311208-35311345)
chr4 (28-161)||(54506775-54506908)
chr4 (25-150)||(19265806-19265931)
chr4 (8-149)||(30682177-30682318)
chr4 (35-155)||(53412101-53412221)
chr4 (3-146)||(2942621-2942763)
chr4 (40-149)||(2653419-2653528)
chr4 (8-161)||(42616884-42617037)
chr4 (25-161)||(49746948-49747083)
chr4 (27-161)||(42517638-42517775)
chr4 (68-150)||(18741515-18741597)
chr4 (37-149)||(32469958-32470069)
chr4 (8-95)||(51625136-51625223)
chr4 (36-149)||(2400777-2400890)
chr4 (12-113)||(46396868-46396969)
chr4 (12-161)||(28500876-28501017)
chr4 (68-148)||(38663488-38663568)
chr4 (69-161)||(50264122-50264214)
chr4 (88-155)||(51624779-51624846)
chr4 (56-149)||(35998811-35998903)
chr4 (76-149)||(44526378-44526451)
chr4 (3-113)||(4972595-4972705)
chr4 (36-150)||(47358958-47359072)
chr4 (8-113)||(52869107-52869212)
chr4 (78-150)||(25142430-25142502)
chr4 (27-126)||(39157873-39157973)
chr4 (84-151)||(49579235-49579302)
chr4 (69-155)||(20612213-20612299)
chr4 (31-125)||(23915434-23915528)
chr4 (98-155)||(10754366-10754423)
chr4 (98-155)||(10968135-10968192)
chr4 (108-149)||(31370381-31370422)
chr4 (15-147)||(48914131-48914268)
chr4 (56-155)||(7986967-7987066)
chr4 (120-155)||(10672646-10672681)
chr4 (120-155)||(10886286-10886321)
chr4 (174-213)||(29295162-29295201)
chr4 (35-126)||(30192227-30192318)
chr4 (41-147)||(18532180-18532286)
chr4 (56-94)||(29295267-29295305)
chr4 (8-150)||(41711437-41711579)
chr4 (108-150)||(43902249-43902291)
chr4 (119-161)||(46396963-46397005)
chr4 (182-212)||(52859948-52859978)
chr4 (34-87)||(21325171-21325224)
chr4 (120-161)||(28911249-28911290)
chr4 (124-161)||(29295217-29295254)
chr4 (35-160)||(39397332-39397457)
chr4 (184-212)||(2066728-2066756)
chr4 (75-155)||(16506281-16506361)
[»] chr6 (47 HSPs)
chr6 (9-212)||(11655921-11656124)
chr6 (3-161)||(30716887-30717045)
chr6 (3-161)||(6801918-6802076)
chr6 (3-161)||(29363293-29363451)
chr6 (15-212)||(5302288-5302484)
chr6 (3-155)||(3291737-3291889)
chr6 (3-149)||(32440614-32440760)
chr6 (3-161)||(21010160-21010322)
chr6 (9-161)||(13087517-13087669)
chr6 (3-155)||(181549-181700)
chr6 (3-155)||(15058110-15058262)
chr6 (11-146)||(1781805-1781939)
chr6 (3-150)||(1955948-1956095)
chr6 (56-161)||(11143609-11143714)
chr6 (25-161)||(13909411-13909547)
chr6 (14-146)||(23142669-23142801)
chr6 (35-155)||(24983450-24983570)
chr6 (32-155)||(31894208-31894331)
chr6 (3-155)||(3720210-3720362)
chr6 (14-149)||(6834349-6834484)
chr6 (35-155)||(1063604-1063724)
chr6 (41-161)||(1225035-1225154)
chr6 (67-155)||(17828933-17829021)
chr6 (82-149)||(34657610-34657677)
chr6 (11-109)||(27448133-27448231)
chr6 (69-150)||(34299993-34300074)
chr6 (76-150)||(4367295-4367369)
chr6 (40-133)||(17835399-17835492)
chr6 (28-125)||(12605457-12605554)
chr6 (41-150)||(21804536-21804644)
chr6 (69-125)||(8115073-8115129)
chr6 (100-155)||(15046117-15046171)
chr6 (69-151)||(10923413-10923495)
chr6 (12-149)||(7920238-7920374)
chr6 (69-162)||(33510126-33510218)
chr6 (42-150)||(15582281-15582389)
chr6 (97-149)||(22398412-22398464)
chr6 (25-105)||(27367427-27367507)
chr6 (25-105)||(27457774-27457854)
chr6 (112-150)||(21425635-21425673)
chr6 (68-126)||(23397655-23397713)
chr6 (182-212)||(27367246-27367276)
chr6 (182-212)||(27457593-27457623)
chr6 (35-88)||(7072220-7072273)
chr6 (69-126)||(8695067-8695124)
chr6 (97-150)||(16205221-16205274)
chr6 (32-116)||(26592354-26592438)
[»] chr1 (79 HSPs)
chr1 (3-161)||(49223959-49224117)
chr1 (3-212)||(20209813-20210021)
chr1 (3-157)||(15699113-15699268)
chr1 (3-161)||(40144820-40144978)
chr1 (8-149)||(16395025-16395165)
chr1 (3-161)||(32825965-32826125)
chr1 (11-161)||(37506111-37506264)
chr1 (3-161)||(45331325-45331486)
chr1 (3-161)||(38787328-38787486)
chr1 (3-149)||(42409993-42410139)
chr1 (24-161)||(37276448-37276585)
chr1 (8-155)||(39864104-39864251)
chr1 (1-149)||(10495838-10495985)
chr1 (3-155)||(12039075-12039227)
chr1 (3-149)||(9307626-9307772)
chr1 (14-162)||(13579605-13579753)
chr1 (11-150)||(21909987-21910125)
chr1 (10-161)||(26093381-26093532)
chr1 (8-150)||(917022-917164)
chr1 (3-149)||(24991626-24991772)
chr1 (35-161)||(36701908-36702034)
chr1 (35-161)||(36718012-36718138)
chr1 (24-161)||(7759202-7759339)
chr1 (3-155)||(23168966-23169118)
chr1 (25-155)||(28748984-28749114)
chr1 (3-149)||(31042796-31042942)
chr1 (8-149)||(2572468-2572608)
chr1 (1-149)||(44707731-44707879)
chr1 (35-149)||(8896337-8896451)
chr1 (81-155)||(35367795-35367869)
chr1 (3-124)||(41121795-41121919)
chr1 (11-161)||(52429331-52429481)
chr1 (8-149)||(30754919-30755060)
chr1 (8-161)||(31978630-31978783)
chr1 (3-155)||(6023622-6023774)
chr1 (49-161)||(7351623-7351735)
chr1 (13-161)||(34031510-34031658)
chr1 (35-161)||(6160464-6160590)
chr1 (69-155)||(14757633-14757719)
chr1 (69-155)||(22856276-22856362)
chr1 (8-212)||(33733241-33733443)
chr1 (9-155)||(5179378-5179524)
chr1 (8-94)||(43500762-43500848)
chr1 (77-155)||(25089132-25089211)
chr1 (11-146)||(32970548-32970683)
chr1 (32-162)||(4441605-4441735)
chr1 (40-162)||(44761541-44761663)
chr1 (68-149)||(29778434-29778515)
chr1 (68-147)||(24880874-24880956)
chr1 (35-147)||(29074885-29074997)
chr1 (8-79)||(35367622-35367694)
chr1 (80-155)||(37539120-37539195)
chr1 (68-146)||(32219699-32219777)
chr1 (3-149)||(41080599-41080743)
chr1 (41-148)||(9379231-9379339)
chr1 (3-150)||(11449883-11450028)
chr1 (100-155)||(6785249-6785304)
chr1 (56-155)||(27721525-27721624)
chr1 (41-155)||(26257951-26258065)
chr1 (24-113)||(22181371-22181460)
chr1 (98-155)||(37177829-37177886)
chr1 (98-149)||(2137437-2137488)
chr1 (56-155)||(15057423-15057521)
chr1 (96-150)||(3260589-3260643)
chr1 (69-131)||(12151193-12151255)
chr1 (56-149)||(27896954-27897047)
chr1 (35-155)||(31154121-31154241)
chr1 (115-155)||(35682879-35682919)
chr1 (9-97)||(43614448-43614536)
chr1 (108-150)||(4659774-4659816)
chr1 (80-122)||(13365999-13366041)
chr1 (75-137)||(44426783-44426845)
chr1 (41-122)||(3312137-3312218)
chr1 (3-92)||(6267829-6267918)
chr1 (68-149)||(9412841-9412922)
chr1 (68-145)||(52837283-52837360)
chr1 (41-129)||(6365650-6365738)
chr1 (184-212)||(16395198-16395226)
chr1 (56-92)||(26000810-26000846)
[»] chr2 (59 HSPs)
chr2 (3-161)||(15359055-15359213)
chr2 (3-161)||(36794271-36794429)
chr2 (3-212)||(39785522-39785733)
chr2 (3-149)||(16463688-16463834)
chr2 (3-212)||(25637417-25637625)
chr2 (3-149)||(5789616-5789762)
chr2 (8-150)||(31448666-31448808)
chr2 (3-212)||(36354411-36354618)
chr2 (8-161)||(37322415-37322569)
chr2 (8-150)||(16805879-16806021)
chr2 (8-150)||(16845160-16845302)
chr2 (12-212)||(34120416-34120613)
chr2 (13-213)||(34225526-34225725)
chr2 (3-150)||(45235579-45235726)
chr2 (21-155)||(35313880-35314014)
chr2 (11-161)||(39691477-39691627)
chr2 (1-156)||(11742495-11742649)
chr2 (8-150)||(14523345-14523487)
chr2 (14-104)||(32783408-32783498)
chr2 (32-161)||(8947049-8947178)
chr2 (11-155)||(17695323-17695467)
chr2 (31-212)||(9458267-9458441)
chr2 (8-161)||(43410413-43410566)
chr2 (11-155)||(16377632-16377780)
chr2 (32-155)||(43699596-43699716)
chr2 (36-149)||(39329663-39329777)
chr2 (49-155)||(35242311-35242417)
chr2 (8-142)||(43115775-43115909)
chr2 (67-149)||(17346394-17346476)
chr2 (103-212)||(7494906-7495015)
chr2 (68-149)||(32831208-32831289)
chr2 (101-213)||(18202040-18202152)
chr2 (97-149)||(19937384-19937436)
chr2 (8-92)||(19937733-19937817)
chr2 (98-153)||(3323335-3323390)
chr2 (56-155)||(43730609-43730705)
chr2 (70-161)||(26608178-26608269)
chr2 (82-149)||(26863405-26863472)
chr2 (31-126)||(31976370-31976465)
chr2 (100-161)||(5272204-5272265)
chr2 (77-150)||(18853243-18853316)
chr2 (41-136)||(19426467-19426563)
chr2 (68-149)||(28186213-28186294)
chr2 (68-121)||(38187916-38187969)
chr2 (3-79)||(3323254-3323330)
chr2 (68-116)||(3601416-3601464)
chr2 (69-161)||(19444133-19444225)
chr2 (43-147)||(41220954-41221058)
chr2 (9-92)||(10005099-10005181)
chr2 (181-212)||(16463624-16463655)
chr2 (68-155)||(28170616-28170703)
chr2 (1-72)||(39443789-39443860)
chr2 (13-75)||(26607946-26608008)
chr2 (68-113)||(1206736-1206781)
chr2 (174-211)||(8928547-8928584)
chr2 (56-125)||(26337142-26337211)
chr2 (10-83)||(27501513-27501586)
chr2 (119-155)||(1206775-1206811)
chr2 (115-155)||(7438932-7438972)
[»] chr7 (73 HSPs)
chr7 (3-161)||(42935652-42935813)
chr7 (8-212)||(43873867-43874070)
chr7 (3-212)||(83328-83537)
chr7 (3-212)||(28202286-28202494)
chr7 (3-212)||(759068-759276)
chr7 (3-155)||(11373405-11373557)
chr7 (3-161)||(27920982-27921140)
chr7 (11-161)||(38391742-38391892)
chr7 (3-160)||(9785983-9786140)
chr7 (15-155)||(41506054-41506194)
chr7 (8-145)||(21759966-21760103)
chr7 (3-212)||(34947444-34947652)
chr7 (9-161)||(21390289-21390441)
chr7 (8-155)||(3178186-3178333)
chr7 (8-149)||(24516271-24516412)
chr7 (3-161)||(44424138-44424287)
chr7 (1-155)||(46478268-46478422)
chr7 (10-155)||(28103733-28103878)
chr7 (2-149)||(7463219-7463366)
chr7 (3-212)||(40076262-40076467)
chr7 (3-149)||(13961965-13962111)
chr7 (3-133)||(16560547-16560677)
chr7 (3-133)||(16604985-16605115)
chr7 (3-155)||(2459471-2459621)
chr7 (8-161)||(48608860-48609009)
chr7 (3-212)||(21350605-21350811)
chr7 (3-149)||(22738707-22738853)
chr7 (32-155)||(34100553-34100676)
chr7 (3-164)||(8592417-8592578)
chr7 (25-155)||(7457420-7457550)
chr7 (8-149)||(26974032-26974176)
chr7 (10-139)||(5524396-5524525)
chr7 (56-161)||(6494964-6495069)
chr7 (8-161)||(32346034-32346187)
chr7 (11-155)||(23670486-23670629)
chr7 (41-150)||(32018930-32019040)
chr7 (13-155)||(33819214-33819356)
chr7 (76-161)||(25571413-25571498)
chr7 (12-149)||(30865973-30866110)
chr7 (3-155)||(16904379-16904531)
chr7 (11-149)||(29835399-29835536)
chr7 (3-111)||(46211472-46211583)
chr7 (8-153)||(31930479-31930626)
chr7 (71-155)||(37245690-37245774)
chr7 (8-155)||(19271715-19271862)
chr7 (35-161)||(49101657-49101786)
chr7 (69-150)||(42796010-42796094)
chr7 (49-150)||(32018735-32018836)
chr7 (3-92)||(44180268-44180357)
chr7 (8-115)||(12631345-12631452)
chr7 (86-161)||(36790734-36790809)
chr7 (69-126)||(21937830-21937887)
chr7 (84-155)||(30546413-30546484)
chr7 (68-149)||(17828393-17828473)
chr7 (94-155)||(47045539-47045600)
chr7 (69-151)||(37850769-37850852)
chr7 (30-109)||(39308632-39308711)
chr7 (27-125)||(7930083-7930181)
chr7 (68-150)||(24166996-24167078)
chr7 (27-125)||(29121533-29121631)
chr7 (51-151)||(31665741-31665842)
chr7 (98-147)||(35333051-35333100)
chr7 (68-129)||(39005447-39005508)
chr7 (56-109)||(39452390-39452443)
chr7 (8-116)||(2850863-2850971)
chr7 (3-47)||(36790854-36790898)
chr7 (68-111)||(47045495-47045538)
chr7 (182-212)||(25571364-25571394)
chr7 (82-124)||(46602081-46602123)
chr7 (182-212)||(47045620-47045650)
chr7 (78-152)||(37490466-37490536)
chr7 (181-213)||(13961904-13961936)
chr7 (108-152)||(37490378-37490422)
[»] chr8 (66 HSPs)
chr8 (3-149)||(10097962-10098108)
chr8 (17-161)||(31231717-31231861)
chr8 (3-161)||(34393925-34394087)
chr8 (8-213)||(10179923-10180127)
chr8 (13-212)||(9300094-9300294)
chr8 (8-155)||(31271014-31271161)
chr8 (11-161)||(22771814-22771964)
chr8 (3-212)||(39482549-39482760)
chr8 (3-159)||(2767262-2767424)
chr8 (11-150)||(40996344-40996483)
chr8 (11-161)||(13335203-13335353)
chr8 (1-155)||(45425635-45425789)
chr8 (9-146)||(21216078-21216215)
chr8 (3-211)||(17719229-17719436)
chr8 (44-155)||(42886993-42887104)
chr8 (35-161)||(5053156-5053282)
chr8 (32-150)||(34948687-34948805)
chr8 (41-147)||(44761503-44761609)
chr8 (8-161)||(26626088-26626241)
chr8 (9-155)||(32476280-32476426)
chr8 (3-149)||(31082618-31082764)
chr8 (8-125)||(1875568-1875685)
chr8 (1-149)||(11976905-11977053)
chr8 (76-162)||(32678389-32678475)
chr8 (14-151)||(42972490-42972630)
chr8 (3-96)||(36967413-36967506)
chr8 (3-129)||(51132-51257)
chr8 (35-155)||(4428354-4428474)
chr8 (3-155)||(39405755-39405907)
chr8 (31-213)||(396610-396791)
chr8 (32-155)||(7172907-7173030)
chr8 (69-155)||(17823914-17824000)
chr8 (14-146)||(14854916-14855048)
chr8 (82-150)||(29226578-29226646)
chr8 (77-164)||(35732105-35732192)
chr8 (69-149)||(27294096-27294176)
chr8 (81-161)||(10953787-10953864)
chr8 (81-161)||(10961792-10961869)
chr8 (35-133)||(31331423-31331521)
chr8 (69-150)||(39466074-39466156)
chr8 (51-152)||(36006906-36007007)
chr8 (59-155)||(4924094-4924190)
chr8 (1-109)||(39300910-39301018)
chr8 (94-161)||(39301018-39301085)
chr8 (8-149)||(43719211-43719353)
chr8 (27-104)||(11649652-11649729)
chr8 (8-104)||(7703132-7703228)
chr8 (3-79)||(32678787-32678863)
chr8 (25-93)||(40109789-40109857)
chr8 (32-79)||(29226231-29226278)
chr8 (41-151)||(5356597-5356706)
chr8 (56-145)||(34057642-34057731)
chr8 (98-155)||(35504937-35504994)
chr8 (68-121)||(44648568-44648621)
chr8 (76-155)||(27870857-27870937)
chr8 (181-212)||(32476225-32476256)
chr8 (14-145)||(33765663-33765794)
chr8 (182-212)||(13335154-13335184)
chr8 (182-212)||(22771984-22772014)
chr8 (80-126)||(29806329-29806375)
chr8 (182-212)||(40996510-40996540)
chr8 (80-125)||(3117066-3117111)
chr8 (98-160)||(6796395-6796461)
chr8 (27-96)||(8741079-8741148)
chr8 (78-115)||(25284991-25285028)
chr8 (181-213)||(50752-50784)
[»] chr5 (49 HSPs)
chr5 (3-161)||(40899905-40900063)
chr5 (3-149)||(21060629-21060775)
chr5 (8-161)||(6753632-6753784)
chr5 (10-212)||(40530199-40530401)
chr5 (10-161)||(27542782-27542933)
chr5 (24-212)||(19929883-19930070)
chr5 (3-161)||(2588036-2588189)
chr5 (11-150)||(7827902-7828041)
chr5 (10-212)||(4818487-4818689)
chr5 (8-161)||(1248577-1248730)
chr5 (13-161)||(8724987-8725135)
chr5 (16-155)||(6754022-6754160)
chr5 (13-155)||(8698302-8698444)
chr5 (3-155)||(29374335-29374487)
chr5 (3-161)||(41062131-41062286)
chr5 (5-155)||(2232043-2232189)
chr5 (32-212)||(6315774-6315953)
chr5 (3-155)||(29570385-29570537)
chr5 (3-155)||(9515729-9515891)
chr5 (13-155)||(42803598-42803740)
chr5 (3-212)||(3348091-3348306)
chr5 (8-149)||(15818453-15818596)
chr5 (8-150)||(30512658-30512801)
chr5 (8-150)||(30552998-30553141)
chr5 (41-149)||(27580599-27580707)
chr5 (3-155)||(31655046-31655198)
chr5 (3-149)||(41496079-41496225)
chr5 (3-155)||(22848352-22848504)
chr5 (25-155)||(6615870-6615999)
chr5 (8-150)||(11904203-11904346)
chr5 (37-155)||(11796169-11796287)
chr5 (35-149)||(26285478-26285592)
chr5 (40-149)||(4441020-4441129)
chr5 (3-155)||(41492295-41492447)
chr5 (35-161)||(15439319-15439444)
chr5 (35-149)||(18841478-18841592)
chr5 (3-155)||(41478820-41478972)
chr5 (82-149)||(39325862-39325929)
chr5 (68-138)||(38161445-38161515)
chr5 (32-116)||(5731808-5731892)
chr5 (68-149)||(7330507-7330587)
chr5 (69-130)||(29856065-29856126)
chr5 (35-151)||(5129232-5129348)
chr5 (48-155)||(11761312-11761418)
chr5 (3-114)||(38508155-38508266)
chr5 (35-149)||(37184079-37184193)
chr5 (109-149)||(10598214-10598254)
chr5 (3-115)||(32440174-32440286)
chr5 (77-125)||(39213369-39213417)
[»] scaffold0328 (1 HSPs)
scaffold0328 (3-212)||(7951-8160)
[»] chr3 (68 HSPs)
chr3 (11-161)||(52290880-52291030)
chr3 (3-150)||(45710848-45710995)
chr3 (8-155)||(19823004-19823151)
chr3 (3-213)||(37311885-37312095)
chr3 (8-149)||(29023941-29024081)
chr3 (3-212)||(53560153-53560362)
chr3 (8-150)||(30190635-30190777)
chr3 (11-149)||(37497491-37497629)
chr3 (15-161)||(54726472-54726618)
chr3 (3-161)||(37695635-37695794)
chr3 (11-149)||(11905821-11905959)
chr3 (11-155)||(43253841-43253985)
chr3 (13-212)||(36476521-36476719)
chr3 (9-212)||(10366618-10366827)
chr3 (3-212)||(17652690-17652893)
chr3 (8-147)||(24569075-24569214)
chr3 (8-155)||(8679029-8679176)
chr3 (3-155)||(12736542-12736694)
chr3 (3-155)||(36460386-36460538)
chr3 (3-161)||(1778630-1778787)
chr3 (1-155)||(11632074-11632227)
chr3 (32-150)||(23004381-23004499)
chr3 (69-155)||(44301555-44301641)
chr3 (3-161)||(3313241-3313395)
chr3 (12-161)||(37772943-37773092)
chr3 (35-161)||(3901151-3901277)
chr3 (41-149)||(34750495-34750603)
chr3 (3-150)||(34957501-34957648)
chr3 (11-149)||(27471334-27471472)
chr3 (75-161)||(39043799-39043885)
chr3 (13-149)||(28690762-28690898)
chr3 (8-155)||(51837934-51838081)
chr3 (14-151)||(30711070-30711207)
chr3 (34-143)||(43719272-43719380)
chr3 (35-159)||(19611898-19612021)
chr3 (35-163)||(30682068-30682196)
chr3 (3-146)||(38795346-38795489)
chr3 (35-149)||(19609298-19609412)
chr3 (31-149)||(36462944-36463062)
chr3 (9-149)||(14194555-14194694)
chr3 (8-115)||(49830162-49830270)
chr3 (8-161)||(5322914-5323065)
chr3 (1-95)||(31158490-31158583)
chr3 (97-160)||(38705163-38705226)
chr3 (98-155)||(12904857-12904914)
chr3 (49-130)||(54477475-54477556)
chr3 (82-155)||(33491408-33491482)
chr3 (1-149)||(38137411-38137562)
chr3 (14-115)||(50035198-50035299)
chr3 (3-75)||(33491053-33491125)
chr3 (101-148)||(40462319-40462366)
chr3 (88-161)||(41038448-41038521)
chr3 (108-149)||(41351639-41351680)
chr3 (69-142)||(48541036-48541109)
chr3 (82-155)||(49447840-49447913)
chr3 (76-155)||(42469724-42469803)
chr3 (75-161)||(23068185-23068270)
chr3 (71-149)||(27549323-27549401)
chr3 (182-212)||(38795281-38795311)
chr3 (1-79)||(51064786-51064864)
chr3 (56-149)||(24245117-24245209)
chr3 (35-92)||(29595729-29595786)
chr3 (182-211)||(39043903-39043932)
chr3 (28-121)||(39931656-39931749)
chr3 (88-149)||(40194502-40194563)
chr3 (41-118)||(42278695-42278772)
chr3 (80-125)||(54225883-54225928)
chr3 (85-129)||(37804854-37804898)
[»] scaffold0110 (1 HSPs)
scaffold0110 (3-161)||(1691-1849)
[»] scaffold0159 (1 HSPs)
scaffold0159 (3-149)||(33989-34135)
[»] scaffold0182 (1 HSPs)
scaffold0182 (32-160)||(20352-20480)
[»] scaffold0330 (1 HSPs)
scaffold0330 (11-149)||(5389-5527)
[»] scaffold0012 (1 HSPs)
scaffold0012 (12-161)||(105671-105820)
[»] scaffold0583 (1 HSPs)
scaffold0583 (9-161)||(2012-2164)
[»] scaffold0294 (1 HSPs)
scaffold0294 (3-149)||(17034-17180)
[»] scaffold0018 (1 HSPs)
scaffold0018 (3-149)||(136007-136153)
[»] scaffold0302 (1 HSPs)
scaffold0302 (27-150)||(16096-16219)
[»] scaffold0095 (2 HSPs)
scaffold0095 (3-155)||(50197-50349)
scaffold0095 (69-150)||(22345-22427)
[»] scaffold1391 (1 HSPs)
scaffold1391 (14-113)||(1798-1897)
[»] scaffold1809 (1 HSPs)
scaffold1809 (49-155)||(700-806)
[»] scaffold0003 (2 HSPs)
scaffold0003 (11-109)||(39127-39225)
scaffold0003 (76-161)||(252848-252932)
[»] scaffold2146 (1 HSPs)
scaffold2146 (69-155)||(398-484)
[»] scaffold0464 (1 HSPs)
scaffold0464 (97-145)||(6041-6089)
[»] scaffold0016 (1 HSPs)
scaffold0016 (112-155)||(76285-76328)


Alignment Details
Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 47772995 - 47773203
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||| ||||||||| |||| || |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  47772995 aataatagtcgtttaaggttgatgcacagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 47773094  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||         |||||  ||||||||||||||||||||||    
T  47773095 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat-ggaaaaaaataataaatgctgcattggtattctaaagtga 47773193  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  47773194 caattatttt 47773203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 33790707 - 33790865
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  33790707 aataatagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtttcatttgctaaaacacccttatt 33790806  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  33790807 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataataat 33790865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 11907575 - 11907783
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| ||||||||| ||||||| |||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  11907575 aataatagtcatttaaggttaatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 11907674  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||| ||||||||||||||||||| || ||||||||||||  |||||||||| ||         |||||  ||||||||||||||||||||||    
T  11907675 aattgtagttattggagtagttaagttggatgaagttcaataaataaatgtattataat-ggaaaaaaataataaatgctgcattggtattctaaagtga 11907773  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  11907774 caattatttt 11907783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 17114585 - 17114427
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17114585 aataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 17114486  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || ||||||||||||||||||||| |||||  || ||||||||||||  ||||||||||    
T  17114485 aattgtagttagtggagtagttaatttggaggaagttcaataaataaaggtattataat 17114427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 38502458 - 38502616
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||  ||||||||| |||| || |||||| ||||||||||| ||||||||||||||||||| ||||| ||  |||||    
T  38502458 aataatagtcgtttaaggttgatgcatagttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaatacttttatt 38502557  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || | |||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  38502558 aattatagttaatgtagtagttaagttggataaaattcaataaataagagtattataat 38502616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 52859775 - 52859916
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||| |||||| | ||||||| |||||||| ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  52859775 aataatagtcgcttaaggcttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacatccttatt 52859874  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaata 144  Q
    || ||||||||||||||||||||||||| || ||||||||||    
T  52859875 aattgtagttagtggagtagttaagttgaatgaaattcaata 52859916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 2066934 - 2066788
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||| |||||| ||||||||||| ||||| ||||||| ||||| |||||||||||||||    
T  2066934 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaagttagtattatttattaaaacacccttatt 2066835  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || | |||||||||| ||||||||||| ||| |||||||||||||||    
T  2066834 aattttagttagtggggtagttaagttagatgaaattcaataaataa 2066788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 3689707 - 3689549
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  3689707 aataatagtcgtttaaggtttatgtacggttattaaagaaatgattaattgtattgattttgatggtaaaattagtatcatttactaaaacactcttatt 3689608  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || | |||||||| |||| |||||||| ||| ||||| ||| |||||| |||| |||||    
T  3689607 aattatagttagttgagttgttaagttagatgaaattaaattaataagggtataataat 3689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 6609898 - 6609748
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||| ||| ||||||| |||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||| |||||| | ||||||| ||||     
T  6609898 tcgtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttacaaaaacatctttattaattgtaa 6609799  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||| ||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  6609798 ttattggagtagttaagttggatgaaactcaataaataagagtataataat 6609748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 17237272 - 17237424
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||||||||| |||||||||  |||| | ||||||||||||| || |||||| ||||||   || |||||||||||| |||||||||||||| |||||||    
T  17237272 aatactagtcatttaaggtttgtgcatgattattaagaaaataattaattgtgttgattgcaatggtaaaattagtaacatttactaaaacaaccttatt 17237371  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  17237372 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtat 17237424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 34360792 - 34360648
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||| |||  |||||| |||||||  ||||||| ||||||||||||||  || |||||||||||| ||||||||||||||| |||||||| |||||    
T  34360792 tcgtttaaagtttgtgcacgattattaaagaaatgattaattgtattgatttcaatggtaaaattagtagcatttactaaaacactcttattaattgtag 34360693  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  34360692 ttagtggagtagttaagttgaataaaattcaataaataagggtat 34360648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 32884946 - 32884799
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||||||||||| |||||| |||||||  || ||| |||||||| |||||| |||||||| ||||||    
T  32884946 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtagaattagtagcatttagtaaaacactcttatt 32884847  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||    
T  32884846 aattgtagttagtggagtagttaagttggatggaattcaataaataag 32884799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 35380333 - 35380467
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    |||| |||||||||||||||| |||| | |||||||| || |||||||||||| |||||||||||||| | ||||||| ||||||||||||||| |||||    
T  35380333 cacgattattaagaaaatgattaattatgttgattttaatggtaaaattagtagcatttactaaaacatcattattaattgtagttagtggagtggttaa 35380432  T
Q  127 gttggataaaattcaataaataagagtattataat 161  Q
    ||||||| ||||||||||||||||||||| |||||    
T  35380433 gttggatgaaattcaataaataagagtataataat 35380467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 21240709 - 21240838
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||| ||||||| || ||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||    
T  21240709 ttattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcatttactaacacatccttattaattgtagttagttgagtagttaagttgg 21240808  T
Q  132 ataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||| |||| |||||    
T  21240809 atgaaattcaataaataagggtataataat 21240838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 38405083 - 38405224
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||| ||||||| |||| | |||||||  || ||||||||| ||||||||||||||| ||||||||||| ||    
T  38405083 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattctgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattg 38405182  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  38405183 tagttagtggtgtagttaagttggatgaaattcaataaataa 38405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 49428323 - 49428476
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||| ||||||| | |||| |||||||  || ||||||||| ||| ||||||||||| ||||||||||| ||    
T  49428323 tagtcgtttaaggtttttgcacgattattaaggaaatgattatttgtgttgatttcaatggtaaaattaatataatttactaaaatacccttattaattg 49428422  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||| |||||    
T  49428423 tagttagtggagtaattaagttggatgaaattcaataaataagggtataataat 49428476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 47464341 - 47464493
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||   ||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||| || ||||||    
T  47464341 aatattagtcgtttaaggtttgagcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaactcttatt 47464440  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  47464441 aattgtagttggtggagtagttaagttggatgaaattcaataaataagggtat 47464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 11288614 - 11288751
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||| ||| |||||||||||||||| ||||||||||||||  || | ||||||| ||||||||||||||| |  |||||||| |||||    
T  11288614 tcgtttaaggtttatgtacgattattaagaaaatgattaattgtattgatttcaatggcaaaattaatatcatttactaaaata-tcttattaattgtag 11288712  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||||||||||||||||||||||||||||    
T  11288713 ttggtggagtagttaagttggataaaattcaataaataa 11288751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 22130192 - 22130042
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtat----tgattttgatagtaaaattagtatcatttactaaaacaccct 98  Q
    |||| |||||||||||||||  ||||||||||||||| ||||||| ||||||||    ||||||  || ||| |||||||||||||||| |||||| |||    
T  22130192 aatattagtcgtttaaggtttgtgcacggttattaaggaaatgattaattgtatgtgttgatttcaatggtataattagtatcatttacaaaaacatcct 22130093  T
Q  99 tattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  22130092 tattaattgtagttagtggagtaattaagttggatgaaattcaataaataa 22130042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 49175910 - 49176119
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||| | || ||||||||||||| ||||||   |||||  ||  |||||||||||||||||||||||| | |||||||    
T  49175910 aataatagtcgtttaaggtttgtgcatgatttttaagaaaatgattaattgtggagatttcaatgataaaattagtatcatttactaaaataaccttatt 49176009  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||| | ||         ||||    |||||||||||||||||||||    
T  49176010 aattgtagttagcggagtagttaagttggataaaattcaataaataagggtataatagtgggaaaaaaataataattgttgcattggtattctaaagtga 49176109  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  49176110 caattatttt 49176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 43237388 - 43237236
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||| |||||| || ||||  || ||||||||||||  ||||||||||| | | |||||    
T  43237388 aatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgtttatttcaatggtaaaattagtaatatttactaaaaaatcattatt 43237289  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || | ||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  43237288 aattatagttagtgaagtagttaagttggatgaaattcaataaataagtgtat 43237236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 40122830 - 40122977
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  |||||| |||||||| ||||||| |||||  |||||||| ||  ||||||||||| ||||||||||||||||||||||    
T  40122830 aatattagtcgtttaagctttgtgcacgattattaaggaaatgattaattgcgttgattttaatgttaaaattagtagcatttactaaaacacccttatt 40122929  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
     | |||||||||||||| ||||||||| ||  ||||||||||||||||    
T  40122930 gattgtagttagtggagcagttaagttcgacgaaattcaataaataag 40122977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 5841408 - 5841550
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||   ||||||| |||||||  ||||  |||||||| || ||||||||| ||||||||||||||| ||||||||||| ||    
T  5841408 tagtcgtttaaggtttgtgcacaactattaaggaaatgattgattgcgttgattttaatggtaaaattaatatcatttactaaaatacccttattaattg 5841507  T
Q  108 tagttagtggagtag-ttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  5841508 tagttagtggagtagtttaagttggatgaaattcaataaataa 5841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 25233318 - 25233180
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||||||| || ||||||||  |||| || |||||| || |||||||| ||||||||||||||||||||||||||||   |||||| | |||    
T  25233318 tcgtttaaggttgatgtacagttattaaagaaataattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactagtattaattatag 25233219  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||| |||||||||||||||| || ||||||||||||    
T  25233218 ttagtgaagtagttaagttggatgaagttcaataaataa 25233180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 6643659 - 6643788
Alignment:
Q  26 gcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||||| | ||||||| ||||||||||||  ||||||    
T  6643659 gcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatctttattaattgtagttagtggtatagtta 6643758  T
Q  126 agttggataaaattcaataaataagagtat 155  Q
    |||||||| |||||||||||||||| ||||    
T  6643759 agttggatgaaattcaataaataagggtat 6643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 7061640 - 7061792
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  | |||| |||||||| ||||||| |||||| |||||||  || |||||||||||||||||||||| || | | |||||    
T  7061640 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactataatatctttatt 7061739  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||||| || |||||||| || |||||||||||||||| ||||    
T  7061740 aattgtagttagtggattaattaagttgaatgaaattcaataaataagggtat 7061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 52247409 - 52247556
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||| |  |||||| |||||||||||||||| |||||| || ||||  || ||||||||| ||  ||||||||||| | ||||||||| ||    
T  52247409 tagtcgtttaaggattgtgcacgattattaagaaaatgattaattgtgttaatttcaatggtaaaattaatacaatttactaaaatatccttattaattg 52247508  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||||||||||| || ||||||| |||||||| ||||    
T  52247509 tagttagtggagtagttaagttgaatgaaattcattaaataagtgtat 52247556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 44536182 - 44536323
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    |||||| ||| ||||||| |||||||| ||||||| |||||| |||||||| || |||||||||| |  ||||| ||||||||||||||||| |||||||    
T  44536182 gtttaaagtttatgcacgattattaaggaaatgattaattgtgttgattttaatggtaaaattagcaggatttattaaaacacccttattaattgtagtt 44536281  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||| |||||| ||| |||||||| ||||||| ||||    
T  44536282 agtggagtagctaagttagatgaaattcaa-aaataagggtat 44536323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 16821312 - 16821517
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||   |||||| |||||| |||||||  ||  ||||||||||||||||||||| || | ||||||||| |     
T  16821312 tagtcgtttaaggtttgtgcacgattattaatgcaatgattaattgtgttgatttcaatgataaaattagtatcatttactataatatccttattaatta 16821411  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaatt 207  Q
    |||||||||||||| |||||||| || |||||||||||||||| |||| ||| |            |||||  |||||||||||||||||||||||||||    
T  16821412 tagttagtggagtatttaagttgaatgaaattcaataaataagggtataatagtgcaaaaataataataaatgctgcattggtattctaaagtgacaatt 16821511  T
Q  208 atttta 213  Q
    ||||||    
T  16821512 atttta 16821517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 26147637 - 26147750
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggat-aaaattcaataaat 147  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| ||  ||||||||||    
T  26147637 aattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttattaattgtagttagtggagtaattaagttggatgaattttcaataaat 26147736  T
Q  148 aagagtattataat 161  Q
    ||| |||| |||||    
T  26147737 aagggtataataat 26147750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 53346904 - 53346752
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||  ||  |||||| ||||||||||||| ||  ||||| ||  |||  || ||||||||| || ||||||||||||||||||||||    
T  53346904 aatattagtcgtttaaaatttgtgcacgattattaagaaaataattgattgtgttagtttcaatggtaaaattaatagcatttactaaaacacccttatt 53346805  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || | |||||||||||||||||||||| ||| |||||||||||||| ||||||    
T  53346804 aattttagttagtggagtagttaagtttgatgaaattcaataaatatgagtat 53346752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 462071 - 461945
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| ||||||||||||||  || |||||| || ||| ||||||||||| | ||||||||| |||| |||| ||||||||||||||| |||    
T  462071 ttaagaaaatgattaattgtattgatttcaatggtaaaagtaatattatttactaaaatatccttattaattgtaattagcggagtagttaagttgaata 461972  T
Q  135 aaattcaataaataagagtattataat 161  Q
    |||||||| ||||||| |||| |||||    
T  461971 aaattcaacaaataagggtataataat 461945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 36985893 - 36985779
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| |||||| |||||||  || ||||||||||||||||||||||||| |||| |||||| |||||||||| || || ||||||||||| ||||||    
T  36985893 aaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccgtattaattgtagttagtagaataattaagttggatgaaattc 36985794  T
Q  141 aataaataagagtat 155  Q
    |||||||||| ||||    
T  36985793 aataaataagggtat 36985779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 35311208 - 35311345
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||||||  |||||| |||||||| ||||||| |||| | || ||||  || ||||||||| |  ||||||||| ||||| |||||||| ||||||    
T  35311208 cgtttaaggtttgtgcacgattattaaggaaatgattaattatgttaatttcaatggtaaaattaattgcatttactagaacactcttattaattgtagt 35311307  T
Q  112 tagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  35311308 tagtggagtaattaagttggatgaaattcaataaataa 35311345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 54506908 - 54506775
Alignment:
Q  28 acggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaag 127  Q
    |||||||||||||||||||| || ||| |||||||  || ||||||||| ||||||||| ||||| | | |||| || ||||||||||||||||||||||    
T  54506908 acggttattaagaaaatgattaactgtgttgatttcaatggtaaaattaatatcatttattaaaatatcattatcaattgtagttagtggagtagttaag 54506809  T
Q  128 ttggataaaattcaataaataagagtattataat 161  Q
    || ||| ||||||||| ||||||| ||| |||||    
T  54506808 tttgatgaaattcaattaataagaatataataat 54506775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 19265931 - 19265806
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    ||||||||||||||||||||||| |||| |||| ||||  ||| |||||||| | | ||||| ||||| | ||||||||| | |||||||||||||||||    
T  19265931 tgcacggttattaagaaaatgattaattatatttatttcaataataaaattaatgttatttattaaaataaccttattaattatagttagtggagtagtt 19265832  T
Q  125 aagttggataaaattcaataaataag 150  Q
    |||||| || ||||||||||| ||||    
T  19265831 aagttgaatgaaattcaataattaag 19265806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 30682177 - 30682318
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  ||||||  |||||| |||||||| |||||| || |||||  | ||||||||| |||||||||||| || | ||||||||  ||    
T  30682177 tagtcgtttaaggtttttgcacgactattaaaaaaatgattaattgtgttaattttattggtaaaattaatatcatttactataatatccttattagttg 30682276  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| |||||||||| ||| || |||||||||||||||    
T  30682277 tagttagtagagtagttaatttgaatgaaattcaataaataa 30682318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 53412221 - 53412101
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||| ||| |||| |||||||||  || ||||||||||||||||||||||||| |   ||||||| | ||||| ||||| ||||||||||||||     
T  53412221 ttaagaaaacgattaattttattgatttcaatggtaaaattagtatcatttactaaaatatttttattaattatagtttgtggaatagttaagttggatg 53412122  T
Q  135 aaattcaataaataagagtat 155  Q
    ||||||||||||||| |||||    
T  53412121 aaattcaataaataaaagtat 53412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 2942621 - 2942763
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |  | | |||||||  ||||||| |||||| ||||||| |||  ||||||||||| |||||||||||||| |||||||    
T  2942621 aatattagtcgtttaaggtttgtataagattattaaagaaatgattaattgtgttgatttcgatgataaaattagtagcatttactaaaaca-ccttatt 2942719  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaa 146  Q
    || ||||||||||||||| ||||||||| || || |||||||||    
T  2942720 aattgtagttagtggagtggttaagttgaatgaatttcaataaa 2942763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 2653528 - 2653419
Alignment:
Q  40 aaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaatt 139  Q
    |||||||| |||||| |||||||  || ||||||||||||||||||| ||||| || |||||||| ||||||||  ||||||||||| |||||| |||||    
T  2653528 aaaatgattaattgtgttgatttcaattgtaaaattagtatcatttattaaaatactcttattaattgtagttaaaggagtagttaaattggatgaaatt 2653429  T
Q  140 caataaataa 149  Q
     |||||||||    
T  2653428 taataaataa 2653419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 42616884 - 42617037
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||| ||  |||| | |||||||  ||||||| || ||| |||||||  || ||||||||| ||||||||||||||| |   ||||||| ||    
T  42616884 tagtcgtttaagttttgtgcatgattattaaagaaatgattaactgtgttgatttcaatggtaaaattaatatcatttactaaaatatttttattaattg 42616983  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||| |||||||||||||||| | || |||||||||||||||| |||| |||||    
T  42616984 tagtaagtggagtagttaagtcgaatgaaattcaataaataagtgtataataat 42617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 49747083 - 49746948
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    |||||| ||||||| ||||| || |||||| |||||||  ||  |||||||||||  ||||||||||| ||| | ||||| | |||||||| ||||||||    
T  49747083 tgcacgattattaa-aaaataattaattgtgttgatttcaatgataaaattagtagtatttactaaaataccttcattaattatagttagttgagtagtt 49746985  T
Q  125 aagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||| |||||||||||||||| |||| |||||    
T  49746984 aagttggatgaaattcaataaataagggtataataat 49746948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 42517638 - 42517775
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtg---gagtagt 123  Q
    |||| |||||||||||||||| |||||| |||||||  || |||||||||  |||||||||||||| ||||||||||| | |||||||||    | ||||    
T  42517638 cacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaagatcatttactaaaatacccttattaattatagttagtgaaatactagt 42517737  T
Q  124 taagttggataaaattcaataaataagagtattataat 161  Q
     ||||| ||| ||||||||||||||| ||||| |||||    
T  42517738 aaagttagatgaaattcaataaataacagtataataat 42517775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 18741515 - 18741597
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||||| ||||||| ||||| | | ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  18741515 gtaaaattagtgtcatttattaaaatatctttattaattgtagttaatggagtagttaagttggatgaaattcaataaataag 18741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 149
Target Start/End: Original strand, 32469958 - 32470069
Alignment:
Q  37 aagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaa 136  Q
    ||||||||||| |||||| |||||||| || ||||||||||||||||||| |||||||  |||||||| |||||||| |  |||  ||||||| ||| ||    
T  32469958 aagaaaatgattaattgtgttgattttaatggtaaaattagtatcatttattaaaacattcttattaactgtagttaataaagtttttaagtttgat-aa 32470056  T
Q  137 attcaataaataa 149  Q
    |||||||||||||    
T  32470057 attcaataaataa 32470069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 51625223 - 51625136
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacac 95  Q
    ||||||||||| |||  |||||| |||||||||||||||| |||||| |||||||  || |||||||||||| |||||||||||||||    
T  51625223 tagtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaacac 51625136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 2400890 - 2400777
Alignment:
Q  36 taagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataa 135  Q
    |||||||||||| | ||||||| ||| | || ||| |||||  || ||||||||||||||||| ||| | ||||||| |||||||||||||||   ||||    
T  2400890 taagaaaatgatcagttgtattaattataatggtacaattaacattatttactaaaacaccctcattgattgtagtttgtggagtagttaagtataataa 2400791  T
Q  136 aattcaataaataa 149  Q
    ||||||||||||||    
T  2400790 aattcaataaataa 2400777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 46396868 - 46396969
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||||||  |||||| | |||||| ||||||| |||||| |||||||  || ||||||||| || ||||||||||||||| |||||||| ||||||    
T  46396868 cgtttaaggtttgtgcacgatcattaagtaaatgattaattgtgttgatttcaatggtaaaattaatagcatttactaaaacactcttattaattgtagt 46396967  T
Q  112 ta 113  Q
    ||    
T  46396968 ta 46396969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 28500876 - 28501017
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    ||||||| |||  |||||| |||||||| |||||||  ||||| |||||||  || ||||||||| ||||||||||||||| ||||||||||| || |||    
T  28500876 cgtttaatgtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgcagt 28500975  T
Q  112 tagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
            |||||||||| ||| |||||||||||||||| |||| |||||    
T  28500976 --------tagttaagtttgatgaaattcaataaataagggtataataat 28501017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 38663488 - 38663568
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||||||||||| |||||||||||||||  |||||||  |||||||||  |||||||||||||||| ||||| ||||||||    
T  38663488 gtaaaattagtagcatttactaaaacacttttattaatcgtagttagtaaagtagttaagttggatgaaatttaataaata 38663568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 50264122 - 50264214
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||  |||||||||||||| || |||||||| ||||||||||| | || |||||||| || |||||||||||||||| |||| |||||    
T  50264122 taaaattaacatcatttactaaaatactcttattaattgtagttagtgaaatatttaagttgaatgaaattcaataaataagggtataataat 50264214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 155
Target Start/End: Complemental strand, 51624846 - 51624779
Alignment:
Q  88 taaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||  ||||||  |||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  51624846 taaaacacttttattatttgtagttagtggagtagttaagttggatgaaattcaataaataagggtat 51624779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 35998903 - 35998811
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| | ||||||||||||| |||||| ||||| | | ||||||| |||||||  |||||||||||||||||||  ||||||||||||||    
T  35998903 ttgattttaacagtaaaattagtaacatttattaaaatatcattattaattgtagttgatggagtagttaagttggat-gaattcaataaataa 35998811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 149
Target Start/End: Complemental strand, 44526451 - 44526378
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| |||||| ||||||| ||||||||| ||||||||||||| |||| ||||||||| ||||| |||||||||    
T  44526451 agtaacatttattaaaacatccttattaattgtagttagtggaatagtgaagttggatgaaatttaataaataa 44526378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 4972705 - 4972595
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  |||||| |||||||  ||||||| |||||| |||||||  || | |||||| ||  ||||||||||||||| ||||||    
T  4972705 aatattagtcgtttaagatttgtgcacgattattaatgaaatgattaattgtgttgatttcaattgaaaaattggtgacatttactaaaacactcttatt 4972606  T
Q  103 aaatgtagtta 113  Q
    || ||||||||    
T  4972605 aattgtagtta 4972595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 47358958 - 47359072
Alignment:
Q  36 taagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataa 135  Q
    ||||||||| ||  ||||| |||||||  ||  ||||||||| || |||| |||||| ||  ||||||| |||||| ||||||||| |||||||| || |    
T  47358958 taagaaaattattgattgtgttgatttcaatgataaaattagaataattttctaaaatacttttattaattgtagtcagtggagtaattaagttgaatga 47359057  T
Q  136 aattcaataaataag 150  Q
    |||||||||||||||    
T  47359058 aattcaataaataag 47359072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 52869212 - 52869107
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||  |||||||| |||| || |||||| |||||||  ||||||| |||| |||| |||| ||||| ||| ||||||| ||    
T  52869212 tagtcgtttaaggtttgtgcacaattattaaggaaataattaattgtgttgatttcaatagtaagattaatatcgtttattaaaatacctttattaattg 52869113  T
Q  108 tagtta 113  Q
    ||||||    
T  52869112 tagtta 52869107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 25142430 - 25142502
Alignment:
Q  78 tatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||| |||||||| | ||||||| | || ||||||||  ||||||||||||||| ||||||||||||||||    
T  25142430 tatcatgtactaaaatatccttattgattgcagttagtgatgtagttaagttggatgaaattcaataaataag 25142502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 39157873 - 39157973
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattga-ttttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    |||| |||||||||||||||| | |||| || | ||||||| |||||||| || ||||||||||||| || |||||||| | ||| |||| |||||||||    
T  39157873 cacgattattaagaaaatgattagttgtgtttaattttgatggtaaaatttgtttcatttactaaaatacacttattaattatagctagtagagtagtta 39157972  T
Q  126 a 126  Q
    |    
T  39157973 a 39157973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Original strand, 49579235 - 49579302
Alignment:
Q  84 ttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataaga 151  Q
    ||||||||||||  ||||||| |||||||| || | | |||||||||||| |||||||||||||||||    
T  49579235 ttactaaaacacttttattaattgtagttattgaaattgttaagttggatgaaattcaataaataaga 49579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 20612213 - 20612299
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||| ||||||| ||||||||||||||| ||||||| ||||| || || |||||||||||    | ||||||||||||||| |||||    
T  20612213 taaagttagtataatttactaaaacaccattattaattgtagataatgaagtagttaagtgaattgaaattcaataaataatagtat 20612299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 23915434 - 23915528
Alignment:
Q  31 gttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||||||| ||||||| | | || |||||||| || |||||||  || | ||||||||||||| | ||||||| | ||||||||||||||||||    
T  23915434 gttattaaggaaatgattagtagtgttgattttaatggtaaaatatgtttaatttactaaaacatcattattaattatagttagtggagtagtta 23915528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 10754423 - 10754366
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||| ||||||||||||| || |||||||| || ||||| |||||||||||||||    
T  10754423 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtat 10754366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 10968192 - 10968135
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||| ||||||||||||| || |||||||| || ||||| |||||||||||||||    
T  10968192 ttattaattgtagttagtggaataattaagttgaatgaaatttaataaataagagtat 10968135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 31370381 - 31370422
Alignment:
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  31370381 tagttagtggagtagttaagttggatgaaaatcaataaataa 31370422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 48914131 - 48914268
Alignment:
Q  15 ttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta-----tcatttactaaaacacccttattaaatgta 109  Q
    |||||||| |||||| ||| ||||| |||| || |||||| || ||||  || ||||||||||||     |||| |||||||| | ||||||||  ||||    
T  48914131 ttaaggtttatgcacagtttttaaggaaataattaattgtgttcatttcaatggtaaaattagtactccatcatatactaaaatatccttattatttgta 48914230  T
Q  110 gttagtggagtagttaagttggataaaattcaataaat 147  Q
    ||||||| |||| |||||||  || |||||||||||||    
T  48914231 gttagtgaagtaattaagtttaatgaaattcaataaat 48914268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 7987066 - 7986967
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| ||  ||||||||||||||| |||||||| |   ||||||| | | |||||| |||||||||||||  || ||||| ||||||||| |||||    
T  7987066 ttgattttaatgataaaattagtatcatctactaaaatattattattaattattgttagtagagtagttaagtttaatgaaattaaataaataaaagtat 7986967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Complemental strand, 10672681 - 10672646
Alignment:
Q  120 tagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||| |||||||||||||||||||||    
T  10672681 tagttaagttggatgaaattcaataaataagagtat 10672646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Complemental strand, 10886321 - 10886286
Alignment:
Q  120 tagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||| |||||||||||||||||||||    
T  10886321 tagttaagttggatgaaattcaataaataagagtat 10886286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 29295201 - 29295162
Alignment:
Q  174 ataaagactgcattggtattctaaagtgacaattatttta 213  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  29295201 ataaatactgcattggtattctaaagtgataattatttta 29295162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 30192318 - 30192227
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    ||||||||||||| |||||| |||||||  ||  |||||||| | |||||| |||||| |  |||||||| |||||||||| ||||| ||||    
T  30192318 ttaagaaaatgattaattgtgttgatttcaattataaaattaatgtcatttgctaaaatattcttattaattgtagttagtagagtaattaa 30192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 18532286 - 18532180
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| |||| |||  ||||| || ||||||||||||| ||||| ||||| |   ||||||| | |||| |||||||| ||||| | |||| ||||||    
T  18532286 aaatgattaattatataaattttaatggtaaaattagtatgatttattaaaatagttttattaattatagtaagtggagtggttaactaggatgaaattc 18532187  T
Q  141 aataaat 147  Q
    |||||||    
T  18532186 aataaat 18532180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 94
Target Start/End: Complemental strand, 29295305 - 29295267
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaaca 94  Q
    |||||||| || |||||||||||||||||||||||||||    
T  29295305 ttgatttttatggtaaaattagtatcatttactaaaaca 29295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 41711437 - 41711579
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||||  || ||| | ||||||| |||| | |||||||| || ||||||||| ||||||||  ||||| | | || |||| |     
T  41711437 tagttgtttaaggtttgtgcacaatttttatggaaatgattaattatgttgattttaatggtaaaattaatatcattttttaaaatatcatttttaattt 41711536  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || |||| ||||| ||||||||  || ||||||||||||||||    
T  41711537 tatttagcggagttgttaagttttatgaaattcaataaataag 41711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 43902291 - 43902249
Alignment:
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||||||| |||||||| || ||||||||||||||||    
T  43902291 tagttagtggagtaattaagttgcatgaaattcaataaataag 43902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 46396963 - 46397005
Alignment:
Q  119 gtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||||| |||||||| |||| |||||    
T  46396963 gtagttaagttggataaaattcattaaataagggtataataat 46397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 52859948 - 52859978
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  52859948 tgcattggtattctaaagtgacaattatttt 52859978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 21325171 - 21325224
Alignment:
Q  34 attaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttac 87  Q
    |||||| |||||||||||||| || ||||  || ||||||||||||||||||||    
T  21325171 attaaggaaatgataaattgtgtttatttcaatggtaaaattagtatcatttac 21325224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 28911249 - 28911290
Alignment:
Q  120 tagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||| ||| ||||||||||||||||||||| |||||    
T  28911249 tagttaagtttgatgaaattcaataaataagagtataataat 28911290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 161
Target Start/End: Complemental strand, 29295254 - 29295217
Alignment:
Q  124 taagttggataaaattcaataaataagagtattataat 161  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  29295254 taagtttgatgaaattcaataaataagagtattataat 29295217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 39397457 - 39397332
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| |||| | |||||||   | ||||| ||| | |||||||||||||  ||| |||||| |||||||| | || |||||||  |||||     
T  39397457 ttaaggaaatgattaattatgttgatttcattggtaaatttaatgtcatttactaaaatccccatattaattgtagttactagattagttaaaatggatg 39397358  T
Q  135 aaattcaataaataagagtattataa 160  Q
    ||||| |||||||||| |||| ||||    
T  39397357 aaatttaataaataagggtataataa 39397332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Complemental strand, 2066756 - 2066728
Alignment:
Q  184 cattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||    
T  2066756 cattggtattctaaagtgacaattatttt 2066728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 16506281 - 16506361
Alignment:
Q  75 tagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| |||||||||||||||  ||||||| |||||||| ||||||| |||| |    ||||||| ||||||||| |||||    
T  16506281 tagtaacatttactaaaacacatttattaattgtagttaatggagtaattaaataaagtaaaatttaataaataaaagtat 16506361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 11655921 - 11656124
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||    
T  11655921 agtcgtttaaggtttatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacccttattaattgt 11656020  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaatta 208  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||| ||||| ||         |||||  |||||||| |||||||||||||||||||    
T  11656021 agttagtggagtagtaaagttggatgaaattcaataaataagggtataataatgggaaaaaaataataaatgctgcattgatattctaaagtgacaatta 11656120  T
Q  209 tttt 212  Q
    ||||    
T  11656121 tttt 11656124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 30717045 - 30716887
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||||||||| ||||||||| ||||||| |||| |||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  30717045 aataatagtcgtttaagattgatgcacagttattaaggaaatgattaattttattgactttgatggtaaaattagtatcatttacttaaacacccttatt 30716946  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30716945 aattgtagttagtggagtagtaaagttggataaaattcaataaataagagtattataat 30716887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 6802076 - 6801918
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| |||||||| |||||||||||||||||| |||| | ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  6802076 aataatagtcgtttaagattgatgcatggttattaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacgcccttatt 6801977  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||||||| || ||| ||||||||| ||||||||||    
T  6801976 aattgtagttagtggagtagttaagttggatgaagttcgataaataagggtattataat 6801918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 29363451 - 29363293
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||  |||||||||||||||| |||||| ||||||||||| |||||| |||||||||||||||||||| |||||||    
T  29363451 aataatagtcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttatt 29363352  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || ||||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||    
T  29363351 aattgtagttagcggattagttaagttggatgaaattcaataaataagagtataataat 29363293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 5302484 - 5302288
Alignment:
Q  15 ttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttag 114  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||| ||| |||||| |||||| ||||||||| ||||||||     
T  5302484 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatataatttaccaaaacatccttattaattgtagttaa 5302385  T
Q  115 tggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    ||||||||||||||||||| || ||||||||||| | |||||||||| ||         |||||  ||||||| ||||||||||||||||||||||||    
T  5302384 tggagtagttaagttggatgaagttcaataaatacgggtattataat-ggaaaaaaataataaatgctgcattagtattctaaagtgacaattatttt 5302288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 3291737 - 3291889
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| ||||||| |||||||| |||||| || |||| |||||||| ||||||||||| ||| |||||    
T  3291737 aataatagtcgtttaaggtttttgcacgattattaaggaaatgattaattgtatcgattttaatggtaatattagtattatttactaaaatacctttatt 3291836  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  3291837 aattgtagttagtgaagtagttaagttggataaaattcaataaataagtgtat 3291889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 32440614 - 32440760
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| || ||||||||||||| || ||||||| |||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  32440614 aataatagtcgtttaagatttatgcacggttatttaggaaatgattaattgtgttgattttgatggtaaaattagtattatttactaaaacacccttatt 32440713  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||| ||||| ||||||||||||||||| ||||  |||||||||    
T  32440714 aattgtaattagtagagtagttaagttggatgaaatgtaataaataa 32440760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 21010322 - 21010160
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||||||| ||||||  |||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||||||||||||     
T  21010322 aataatagttgtttaaggtttatgcacaattattaagaaaatgattaattgtgttaattttgatggaaaaattagtatcatttactaaaacacccttata 21010223  T
Q  103 aaatgtag----ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||    ||||||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  21010222 aattgtagttaattagtggagtagttaagttggatgaaattcaataaataacagtataataat 21010160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 13087669 - 13087517
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    |||||||||||||| ||  ||| ||||||||||| |||| |||||| |||||||  || ||||||||| ||||||||||||||||| ||||||||| | |    
T  13087669 agtcgtttaaggttcataaacgattattaagaaagtgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacatccttattaattat 13087570  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||| |||| ||||||||||| ||||||||||||||||| ||| |||||    
T  13087569 agttagtgaagtaattaagttggatgaaattcaataaataagaatataataat 13087517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 181700 - 181549
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||| |||||||   ||||| ||||||| ||||| || ||||||||||||||  |||||||||||||||  ||||||||||||| | |||||    
T  181700 aatattagtcgtctaaggtttgagcacgattattaaaaaaat-attaattgtattgatttcaatagtaaaattagtagtatttactaaaacatcattatt 181602  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || | |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  181601 aattatagttagtggagtagttaagttggatgaaattcaataaataagggtat 181549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 15058262 - 15058110
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||||||||||| ||||   || ||||  || |||||||||||  |||||||||||| |||||||||    
T  15058262 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgattaattaagttaatttcaatggtaaaattagtggcatttactaaaatacccttatt 15058163  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  15058162 aattgtagttagtgaagtatttaagttggatgaaattcaataaataagggtat 15058110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 1781939 - 1781805
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||||||| || ||||||||||||| |||| | ||||| |  || |||||||||||| |||||||||||||||||||||||| |||||    
T  1781939 tcgtttaaggtttatgcacgattgttaagaaaatgattaattatgttgatctcaatggtaaaattagtagcatttactaaaacacccttattaattgtag 1781840  T
Q  111 ttagtggagtagttaagttggataaaattcaataaa 146  Q
    |||||||||| ||||||||| || ||||||||||||    
T  1781839 ttagtggagt-gttaagttgaatgaaattcaataaa 1781805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 1955948 - 1956095
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| || ||| || |||||||||| ||| ||||||||||||||  || ||||||||||||||||||||||| | || ||||||    
T  1955948 aataatagtcgtttaaggtttatacacagtaattaagaaaaagattaattgtattgatttcaatggtaaaattagtatcatttactaatatactcttatt 1956047  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || ||||||||||| ||||| |  ||| ||||||||||||||||||||    
T  1956048 aattgtagttagtgaagtagctgtgttcgataaaattcaataaataag 1956095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 11143609 - 11143714
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||| || ||||||||||||| ||||    
T  11143609 ttgattttgatgataaaattagtatcatttactaaatcacccttattaattatagttagtgaagtagttaagttggatgaagttcaataaataagggtat 11143708  T
Q  156 tataat 161  Q
    ||||||    
T  11143709 tataat 11143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 13909547 - 13909411
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    |||||| |||||||| ||||||| || ||| |||||||  || |||||||||||  |||||||||||| ||||||||||| |||||||||||||||| ||    
T  13909547 tgcacgattattaaggaaatgattaaatgtgttgatttcaatggtaaaattagtgacatttactaaaatacccttattaattgtagttagtggagtaatt 13909448  T
Q  125 aagttggataaaattcaataaataagagtattataat 161  Q
    ||||| ||| ||||| ||||||||||||||| |||||    
T  13909447 aagttagatgaaattgaataaataagagtataataat 13909411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 23142801 - 23142669
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    ||||||||| || |||| |||||||||||||||| |||||| |||||||  || |||||| ||||  |||||||||||||||||||||||| ||||| ||    
T  23142801 tttaaggtttatccacgattattaagaaaatgattaattgtgttgatttcaatggtaaaaatagtggcatttactaaaacacccttattaattgtaggta 23142702  T
Q  114 gtggagtagttaagttggataaaattcaataaa 146  Q
    |||||||||||||| | ||| ||||||||||||    
T  23142701 gtggagtagttaagctagatgaaattcaataaa 23142669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 24983450 - 24983570
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| | |||  |||||||  || ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |     
T  24983450 ttaaggaaatgattagttgagttgatttcaatggtaaaattagtgtcatttactaaaacacccttattaattgtagttagtggagtagttaagttgggtg 24983549  T
Q  135 aaattcaataaataagagtat 155  Q
    |||||||||||||||| ||||    
T  24983550 aaattcaataaataagggtat 24983570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 31894208 - 31894331
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||||||||||| |||||| |||||||  || |||||||||||| |||||||||||||  | ||||||| ||||||||||| ||||||||||||||    
T  31894208 ttattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacgtcattattaattgtagttagtgaagtagttaagttgg 31894307  T
Q  132 ataaaattcaataaataagagtat 155  Q
    || ||||| |||||||||| ||||    
T  31894308 atgaaatttaataaataagggtat 31894331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 3720210 - 3720362
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||  ||||||| |||||| |||||||  ||  ||||||| |||  |||||| ||||||| ||||||    
T  3720210 aatattagtcgtttaaggtttgtgcacgattattaatgaaatgattaattgtgttgatttcaattataaaatttgtagtatttacaaaaacactcttatt 3720309  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||||| ||||||||||| || ||||||| |||||||||||||    
T  3720310 aattgtagttagtggaatagttaagttgaatgaaattcagtaaataagagtat 3720362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 6834349 - 6834484
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    ||||| ||| ||||||| ||||||||||||| || |||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||| | ||||||    
T  6834349 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 6834448  T
Q  114 gtggagtagttaagttggataaaattcaataaataa 149  Q
    || || ||| ||| ||| || | |||||||||||||    
T  6834449 gtagaatagataaattgaatgagattcaataaataa 6834484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 1063604 - 1063724
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| |||||| |||||||  ||  |||||||||||| ||||||||||| || || | ||| ||||||||||||||||||||||||  ||     
T  1063604 ttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactctgagtaattgtagttagtggagtagttaagttaaatg 1063703  T
Q  135 aaattcaataaataagagtat 155  Q
    ||||| ||||| |||| ||||    
T  1063704 aaatttaataagtaagggtat 1063724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 1225154 - 1225035
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| |||||| |||||||  |||||||||||| ||| ||||||||||| |  |||||||| | ||||||||| || ||||||||||||| |||||     
T  1225154 aaatgattaattgtgttgatttaaatagtaaaattaatattatttactaaaatattcttattaattttagttagtgaagaagttaagttggat-aaattg 1225056  T
Q  141 aataaataagagtattataat 161  Q
    |||||||||| |||| |||||    
T  1225055 aataaataagggtataataat 1225035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 17829021 - 17828933
Alignment:
Q  67 agtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||| ||||||||||||||| | | ||||||| ||||||||||| |||| ||||||||||| ||||| ||| |||||||||||    
T  17829021 agtaaaattaatatcatttactaaaatatctttattaattgtagttagtgaagtaattaagttggatgaaatttaattaataagagtat 17828933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 34657610 - 34657677
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||| ||||||||  ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  34657610 atttattaaaacacttttattaattgtagttagtggagtagttaagttggatgaaattcaataaataa 34657677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 27448133 - 27448231
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    ||||||||||||  |||||  |||||||| ||||||| |||||| |||||||||||  | |||||||||||||||||||||||| | ||||||| ||||    
T  27448133 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 27448231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 34300074 - 34299993
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||||| ||||||||||| | ||||||||| ||| ||||||| ||||||||||||||||   ||||||||||||||    
T  34300074 taaaattagtattatttactaaaatatccttattaattgtggttagtgaagtagttaagttggatggtattcaataaataag 34299993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 4367295 - 4367369
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||| || ||||| ||||||||||    
T  4367295 agtatcattttctaaaatatccttattaactgtagttagtgaagtagttaagttgcatgaaatttaataaataag 4367369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 17835492 - 17835399
Alignment:
Q  40 aaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggat 133  Q
    ||||| || ||||||||||||||| ||| |||||||| | ||||||||||||| ||  ||||||| ||||||| ||  ||||||||||||||||    
T  17835492 aaaataattaattgtattgattttaataataaaattaatctcatttactaaaatacatttattaattgtagtttgtttagtagttaagttggat 17835399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 12605457 - 12605554
Alignment:
Q  28 acggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||||||||| |||||||| |||   ||||||||| || | ||||||  ||||||||| ||||||||| ||||||| | |||||||| |||||||||    
T  12605457 acggttattaacaaaatgattaataagattgattttaatggcaaaatttatatcatttattaaaacacctttattaattttagttagtagagtagtta 12605554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 21804536 - 21804644
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| ||||||||| ||||  || ||||||||||||||||||||| ||| |  |||||||| |||||||||||||  | ||||||||||  |||||     
T  21804536 aaatgattaattgtattaatttcaattgtaaaattagtatcatttacttaaata-tcttattaattgtagttagtggaaaaattaagttggaagaaattt 21804634  T
Q  141 aataaataag 150  Q
    ||||| ||||    
T  21804635 aataactaag 21804644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 8115073 - 8115129
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    |||||||||||||||||||||||| || |||||||| | ||||||||||| ||||||    
T  8115073 taaaattagtatcatttactaaaatactcttattaattttagttagtggattagtta 8115129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 15046171 - 15046117
Alignment:
Q  100 attaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  15046171 attaattgtagttagtggagtagtta-gttggatgaaattcaataaataagggtat 15046117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 10923413 - 10923495
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataaga 151  Q
    |||||||| ||| ||||||||||| ||| || |||| ||||| ||||||| || |||| || ||| |||||||||||||||||    
T  10923413 taaaattaatattatttactaaaataccgttgttaattgtagctagtggaataattaaattagatgaaattcaataaataaga 10923495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 7920374 - 7920238
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||| ||  |||||| || ||||  ||||||| |||| | |||||||  || |||||||||  | |||||||||||| | | ||||||| ||||||    
T  7920374 cgtttaagatttgtgcacgatttttaaagaaatgattaattttgttgatttcaatggtaaaattaaaaccatttactaaaatatc-ttattaattgtagt 7920276  T
Q  112 tagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||| |||| |||| ||| || |||||||||||||||    
T  7920275 tagtgaagtatttaatttgaatgaaattcaataaataa 7920238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 33510218 - 33510126
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataata 162  Q
    |||||||||||| ||||||||||| |   ||||||| |||| ||| | ||||||||||||||||| ||||| | |||||||| |||| ||||||    
T  33510218 taaaattagtat-atttactaaaatatttttattaattgtaattaattgagtagttaagttggatgaaatttattaaataagggtataataata 33510126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 15582389 - 15582281
Alignment:
Q  42 aatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattca 141  Q
    |||||| |||||| |||||||  || ||||||| ||||||||||| ||||| ||  ||| |   ||||||||||| ||| ||||||||  || |||||||    
T  15582389 aatgattaattgtgttgatttcaatggtaaaatcagtatcatttattaaaatacatttacttgttgtagttagtgaagtggttaagtttaatgaaattca 15582290  T
Q  142 ataaataag 150  Q
    |||||||||    
T  15582289 ataaataag 15582281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 22398464 - 22398412
Alignment:
Q  97 cttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| |||||||| || |||||||||||| ||| |||||||||||||||    
T  22398464 cttattaattgtagttattgaagtagttaagttagatgaaattcaataaataa 22398412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 27367427 - 27367507
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaa 105  Q
    |||||| |||||||  ||||||| |||||| ||||||||  | ||||||||| |  |||||||||||||||||||| ||||    
T  27367427 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacacccttactaaa 27367507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 27457774 - 27457854
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaa 105  Q
    |||||| |||||||  ||||||| |||||| ||||||||  | ||||||||| |  |||||||||||||||||||| ||||    
T  27457774 tgcacgattattaaagaaatgattaattgtgttgattttagttgtaaaattaattgcatttactaaaacacccttactaaa 27457854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 21425635 - 21425673
Alignment:
Q  112 tagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  21425635 tagtgaagtagttaagttggatgaaattcaataaataag 21425673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 23397655 - 23397713
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    ||||||||||| | ||||||||||||||   |||||| |||||||||||||||| ||||    
T  23397655 gtaaaattagtgtaatttactaaaacacatctattaagtgtagttagtggagtaattaa 23397713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 27367246 - 27367276
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  27367246 tgcattggtattctaaagtgacaattatttt 27367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 27457593 - 27457623
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  27457593 tgcattggtattctaaagtgacaattatttt 27457623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 7072273 - 7072220
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttact 88  Q
    |||||||||| || |||||| |||||||| || ||||||||||| |||||||||    
T  7072273 ttaagaaaataattaattgtgttgattttaatggtaaaattagtgtcatttact 7072220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 8695124 - 8695067
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    |||||||| || ||||||||||||||  |||||||| ||||||||||| ||| |||||    
T  8695124 taaaattaatagcatttactaaaacattcttattaattgtagttagtgaagtggttaa 8695067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 16205221 - 16205274
Alignment:
Q  97 cttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||| ||||||||||||| || ||||||| ||| ||| ||||||||||||    
T  16205221 cttattaattgtagttagtggaatatttaagttagatgaaactcaataaataag 16205274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 26592438 - 26592354
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtg 116  Q
    |||||||| ||||||| |||  |||||||||| || |||||||  |||||||||||||| | |||||| || | | |||||||||    
T  26592438 ttattaaggaaatgattaataatattgattttaatggtaaaatgtgtatcatttactaatatacccttgtttattatagttagtg 26592354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 6e-61; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 49223959 - 49224117
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  49223959 aataatagtcgtttaagattgatgcacggttactaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 49224058  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  49224059 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat 49224117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 20209813 - 20210021
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| | |||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  20209813 aataatagtcgtttaaaggtgatgcaccgttattaagaaaatgattaattatgttgattttgatagtaaaattagtatcatttactaaaacatccttatt 20209912  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||         |||||  ||||||||||||||||||||||    
T  20209913 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat-gggaaaaaataataaatgctgcattggtattctaaagtga 20210011  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  20210012 caattatttt 20210021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 15699268 - 15699113
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaa-tgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttat 101  Q
    |||| |||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  15699268 aataatagtcgtttaaggttgatgcacagttattaagaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttat 15699169  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataagagtatta 157  Q
    ||| |||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  15699168 taattgtagttagtggagtagttaagttggatgaagttcaataaataagggtatta 15699113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 40144820 - 40144978
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  40144820 aataatagtcgttcaagattgatgcacagttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttatt 40144919  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||| ||||||||||||||||||| || ||||||||||||| ||||||||||    
T  40144920 aattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataat 40144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 16395025 - 16395165
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | |||| |||| ||    
T  16395025 tagtcgtttaaggtttatgcacgattattaagaaaatgattaattgtgttgattttgatagtaaaattagtatcatttactaaaata-cctttttaattg 16395123  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  16395124 tagttagtggagtagttaagttagatgaaattcaataaataa 16395165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 32825965 - 32826125
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| ||| || ||||||||||| ||||||||||||||||||||||||||||| |||||    
T  32825965 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaat-gtgttgattttgatggtaaaattagtatcatttactaaaacacctttatt 32826063  T
Q  103 aaatgtagttagt---ggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||| |||||   |||||||||||||||||| || ||||||||||||| ||||||||||    
T  32826064 aattgtaattagtggaggagtagttaagttggatgaagttcaataaataagggtattataat 32826125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 37506264 - 37506111
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta---tcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||  |||||||||||   ||||||||||||||||  ||||||| ||    
T  37506264 tcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatgataaaattagtactatcatttactaaaacacttttattaattg 37506165  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  37506164 tagttagtggagtagttaagttgaatgaaattcaataaataagggtattataat 37506111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 45331486 - 45331325
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||||| ||||||||||||||||||| || |||| | ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  45331486 aataatagtcgtttaaggttgacgcacggttattaagaaaataattaattatgttgattttgatggtaaaattaatatcatttactaaaacacccttatt 45331387  T
Q  103 aaatgtagttagtggag---tagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||| |||||   |||||||||||||| || |||||||||| || ||| ||||||    
T  45331386 aattgtagttaatggaggaatagttaagttggatgaagttcaataaattagggtaatataat 45331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 38787486 - 38787328
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||| |||||||  ||||| ||||||||||| |||||| ||||||||||| | |||||| |||||||    
T  38787486 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattgattgtgttgattttgatggtaaaactagtatcatttgccaaaacatccttatt 38787387  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || | ||||||||||||||||||| |||||| |||||||||||||||| |||| |||||    
T  38787386 aattatagttagtggagtagttaaattggatgaaattcaataaataagggtataataat 38787328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 42410139 - 42409993
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  42410139 aataatagttgtttaaggttgatgcacggttattaaaaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaagcacccttatt 42410040  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||| |  ||||||||| |||| || ||||||||||||    
T  42410039 aattgtagttagttggatagttaagtaggatgaagttcaataaataa 42409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 37276585 - 37276448
Alignment:
Q  24 atgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagt 123  Q
    ||||||| |||||||| ||||||| || ||| ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||    
T  37276585 atgcacgattattaaggaaatgattaactgtgttgattttgatggtaaaattagtatcgtttactaaaacacccttattaattgtagttagtggaatagt 37276486  T
Q  124 taagttggataaaattcaataaataagagtattataat 161  Q
    ||| |||||| |||||||||||||||| |||| |||||    
T  37276485 taaattggatgaaattcaataaataagggtataataat 37276448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 39864251 - 39864104
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| |||  |||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||| || |||||||| ||    
T  39864251 tagtcgtttaaagtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaatactcttattaattg 39864152  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  39864151 tagttagtggagtagttaagttggatgaaattcaataaataagggtat 39864104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 10495985 - 10495838
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    ||||||||| | |||||||||| ||| | | ||||||| ||||| || |||| | ||||||||||| ||||||||||||||||||||||||||| | |||    
T  10495985 ataatactaattgtttaaggtttatgtaagattattaaaaaaattattaattttgttgattttgatggtaaaattagtatcatttactaaaaca-cttta 10495887  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||||    
T  10495886 ttaattgtaattagtggagtagttaagttggatgaaattcaataaataa 10495838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 12039227 - 12039075
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||| |||| ||||||    
T  12039227 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaatacactcttatt 12039128  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||| ||||||| |||||||||||  ||||||||||||||| ||||    
T  12039127 aattgtagttaatggagtatttaagttggatgtaattcaataaataagggtat 12039075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 9307772 - 9307626
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  | |||| |||||||| ||||||| || ||| |||||||  ||  |||||||| || ||||||||||||||||||| ||    
T  9307772 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaactgtgttgatttcaatgataaaattaatagcatttactaaaacacccttgtt 9307673  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||||||||||||||||||||| |||||||||||||||    
T  9307672 aattgtagttagtggagtagttaagttggatgaaattcaataaataa 9307626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 13579605 - 13579753
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    ||||||||| ||||| | |||||||  ||||||| |||||| |||||||||||   || |||| |||||||||| ||||||||| |||||| ||||||||    
T  13579605 tttaaggtttatgcatgattattaaagaaatgattaattgtgttgattttgatgacaatattaatatcatttacaaaaacacccatattaattgtagtta 13579704  T
Q  114 gtggagtagttaagttggataaaattcaataaataagagtattataata 162  Q
    |||||||| ||||||| ||| |||||||||||||||| |||| ||||||    
T  13579705 gtggagtatttaagtttgatgaaattcaataaataagggtataataata 13579753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 21909987 - 21910125
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||||||  |||||||| ||||||| |||||| ||||||||||| |||||||||||||| ||| |||||||| ||||||||| | |||    
T  21909987 tcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcgtttgctaaaaca-ccttattaactatag 21910085  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || | |||||||||||||| |||  |||||||||||||||    
T  21910086 tttgaggagtagttaagtttgatggaattcaataaataag 21910125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 26093532 - 26093381
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||||||||| ||  |||||| |||||||||||||||| |||||| |||||||  || ||||||||| ||||||||| ||||| | ||||||||| ||||    
T  26093532 gtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatatcatttattaaaatatccttattaattgta 26093433  T
Q  110 gttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||| |||| ||||||| ||| || ||||||||||||| |||| |||||    
T  26093432 gttagtgaagtaattaagttagatgaagttcaataaataagggtataataat 26093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 917164 - 917022
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||  ||||||| |||| | |||||||  || ||||||||| ||||||||||||||| ||||||||||| ||    
T  917164 tagtcgtttaaggtttgtgcacgattattaaataaatgattaattatgttgatttaaatggtaaaattaatatcatttactaaaatacccttattaattg 917065  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||| || ||||||||||| || ||||| ||||||||||    
T  917064 tagttagtagattagttaagttgcatgaaatttaataaataag 917022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 24991626 - 24991772
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  | |||| |||||||| ||||||| |||||| |||||||  |  ||||||||| ||  |||||||| |||||| |||||    
T  24991626 aatattagtcgtttaaggtttgtacacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattaatagtatttactacaacacctttatt 24991725  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||||| |||||||||||||| |||||||||||||||    
T  24991726 aattgtagttagtggaatagttaagttggatgaaattcaataaataa 24991772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 36702034 - 36701908
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| |||| | |||||||  || |||||||||||||||||||||||||  |||||||||| ||||||||||||| | |||||||| |||     
T  36702034 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatg 36701935  T
Q  135 aaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||| |||||    
T  36701934 aaattcaataaataagagtataataat 36701908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 36718138 - 36718012
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| |||| | |||||||  || |||||||||||||||||||||||||  |||||||||| ||||||||||||| | |||||||| |||     
T  36718138 ttaaggaaatgattaattatgttgatttcaatggtaaaattagtatcatttactaaaatgcccttattaattgtagttagtggaatcgttaagtttgatg 36718039  T
Q  135 aaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||| |||||    
T  36718038 aaattcaataaataagagtataataat 36718012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 7759339 - 7759202
Alignment:
Q  24 atgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagt 123  Q
    ||||||| ||||||| ||||| || |||||| |||||||  || || |||||| ||||||||||||||| || |||||||| ||||||||||||| ||||    
T  7759339 atgcacgattattaaaaaaataattaattgtgttgatttcaatggtgaaattaatatcatttactaaaatactcttattaattgtagttagtggaatagt 7759240  T
Q  124 taagttggataaaattcaataaataagagtattataat 161  Q
    ||||||| || |||||||||||||||| |||| |||||    
T  7759239 taagttgaatgaaattcaataaataagggtataataat 7759202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 23168966 - 23169118
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  |||||| ||||||||||||| || |||||| |||||||  || |||||||||||| |||||||||||||| |||||||    
T  23168966 aatattagtcgtttaaagtttgtgcacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacatccttatt 23169065  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || | ||||||||  | |||||||||  | | |||||||||||||||||||||    
T  23169066 aattatagttagttaaatagttaagtgaggtgaaattcaataaataagagtat 23169118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 155
Target Start/End: Complemental strand, 28749114 - 28748984
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    |||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| |||| ||||| || | |||    
T  28749114 tgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtaattagtagaattgtt 28749015  T
Q  125 aagttggataaaattcaataaataagagtat 155  Q
    ||||||||| |||||  ||||||||| ||||    
T  28749014 aagttggatgaaattttataaataagggtat 28748984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 31042942 - 31042796
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||||||  |||| | |||||||| ||||||| |||||| |||||||  || |||||||||||||||||||||  || |||||||||    
T  31042942 aatattagtcatttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactgtaatacccttatt 31042843  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||| ||||| |||| |||||||| || |||||||||||||||    
T  31042842 aattgtaggtagtgaagtaattaagttgaatgaaattcaataaataa 31042796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 2572608 - 2572468
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| |||  || ||| ||||||| | |||||| ||||||||||||||  || ||||||||| ||||||||||||||  ||  ||||||| ||    
T  2572608 tagtcgtttaaagtttgtgtacgattattaaaataatgattaattgtattgatttcaatggtaaaattaatatcatttactaaat-acaattattaattg 2572510  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  2572509 tagttagtggagtagttaagttgaatgaaattcaataaataa 2572468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 44707731 - 44707879
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| ||||||||||| |||  |||||| ||||||   ||||||| |||| |||||||||  ||  |||||||||||  ||||||||||||||  |||    
T  44707731 ataatattagtcgtttaaagtttttgcacgattattatagaaatgattaattatattgatttcaatgataaaattagtagtatttactaaaacacattta 44707830  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| ||||||||||| || ||||||||||||| |||||||||||||||    
T  44707831 ttaattgtagttagtgaagcagttaagttggatgaaattcaataaataa 44707879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 8896337 - 8896451
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||||||||||||  ||||| |||||||  || ||||||||| ||||||||||||||| |   ||||||| ||||||||||||||| ||||||||||||     
T  8896337 ttaagaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaatatatttattaattgtagttagtggagtggttaagttggatg 8896436  T
Q  135 aaattcaataaataa 149  Q
    |||||||||||||||    
T  8896437 aaattcaataaataa 8896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 35367869 - 35367795
Alignment:
Q  81 catttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  35367869 catttactaaaacacccttattaattgtagttagtggagtagttaagttagatgaaattcaataaataagggtat 35367795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 41121795 - 41121919
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaa---gaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctt 99  Q
    |||| |||| |||||||||| ||||||  |||||||   | ||||||| |||||| ||||||||||| |||||||||| || ||||||||||| ||||||    
T  41121795 aataatagttgtttaaggtttatgcacatttattaattaggaaatgattaattgtgttgattttgatggtaaaattagcataatttactaaaataccctt 41121894  T
Q  100 attaaatgtagttagtggagtagtt 124  Q
    ||||| |||||||||||||||||||    
T  41121895 attaattgtagttagtggagtagtt 41121919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 52429481 - 52429331
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |||||| |||| ||| ||||||| ||||   ||||||  ||| ||||| ||| | ||||||| ||||| ||||||||||| |||||    
T  52429481 tcgtttaaggtttgtgcacgattatgaaggaaatgattaatttggttgattacgatggtaaatttaatgtcatttattaaaatacccttattaattgtag 52429382  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||| || ||||||| |||||||| |||| |||||    
T  52429381 ttagtggagtagttaagttgaatgaaattcattaaataagggtataataat 52429331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 30754919 - 30755060
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||| || ||||||| |||||||| ||||||| |||||| |||||||| |  ||||||||  ||| ||||||||||| | | ||||||| |     
T  30754919 tagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgattttaagggtaaaatttatattatttactaaaatatcattattaatta 30755018  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||| | |||||||||| ||| |||||||||||||||    
T  30755019 tagttagtgaaatagttaagttagatgaaattcaataaataa 30755060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 31978630 - 31978783
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| |||  |||||| |||||||||||| ||| |||||| |||||||  || ||||||||| ||||| ||||||||  |  |||||||| |     
T  31978630 tagtcgtttaaagtttgtgcacgattattaagaaaaagattaattgtgttgatttcaatggtaaaattaatatcacttactaaactattcttattaatta 31978729  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||| |||||||||||||||| || ||||||| |||||||| |||| |||||    
T  31978730 tagttaatggagtagttaagttgaattaaattcattaaataagggtataataat 31978783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 6023622 - 6023774
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  ||| || |||||| | ||||| | |||||| |||||||  || ||||| |||||| | |||||||||| ||| |||||    
T  6023622 aatattagtcgtttaatgtttgtgcgcgattattacggaaatgtttaattgtgttgatttcaatggtaaatttagtagcttttactaaaatacctttatt 6023721  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||| ||||||||||||||||||| |||||||||| || |||||||    
T  6023722 aattgtagttattggagtagttaagttggatgaaattcaatacatgagagtat 6023774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 161
Target Start/End: Complemental strand, 7351735 - 7351623
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||||| |||||||| ||  |||||||| ||| ||||||||||| | ||||||||| | ||||||||||| || |||||||||| |||||||||||||||    
T  7351735 aattgtgttgattttaatgataaaattaatattatttactaaaataaccttattaattctagttagtggaataattaagttggacaaaattcaataaata 7351636  T
Q  149 agagtattataat 161  Q
    ||||||| |||||    
T  7351635 agagtataataat 7351623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 34031510 - 34031658
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  |||| | |||||||| ||||||| | |||| ||||||   || ||||||||| ||||||||||||||| ||| ||||||| |||||||    
T  34031510 gtttaaggtttgtgcatgattattaaggaaatgattacttgtgttgattccaatggtaaaattaatatcatttactaaaataccgttattaattgtagtt 34031609  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||| | |||| | |||| || ||||||||||||||||||||| |||||    
T  34031610 agtgtaatagtaaggttgaatgaaattcaataaataagagtataataat 34031658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 6160464 - 6160590
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| |||||| |||||||  ||  |||||||||||| ||||||||||| || |||||||| |||||||| |||| ||||||||||| ||     
T  6160464 ttaagaaaatgattaattgtgttgatttcaatgataaaattagtattatttactaaaatactcttattaattgtagttaatggaatagttaagttgaatg 6160563  T
Q  135 aaattcaataaataagagtattataat 161  Q
     ||||||||||| ||| |||| |||||    
T  6160564 taattcaataaacaagggtataataat 6160590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 14757633 - 14757719
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||| ||| ||||| |||||||||| ||||    
T  14757633 taaaattagtaacatttactaaaacactcttattaattgtagttagtgaagtagttaagttcgatgaaatttaataaataagggtat 14757719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 22856276 - 22856362
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| || |||||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  22856276 taaaattaataccatttactaaaataccctaattaattgtagttagtggagtagttaagctggatgaaattcaataaataaaagtat 22856362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 212
Target Start/End: Original strand, 33733241 - 33733443
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| |||  |||||| |||||||| ||||||| | |||| |||||||  || ||||||||| || |||||||||||| ||  ||||||| ||    
T  33733241 tagtcgtttaaagtttgtgcacgattattaaggaaatgatta-ttgtgttgatttcaatggtaaaattattaacatttactaaaatacttttattaattg 33733339  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaatt 207  Q
    |||||||| |||| |||| || | || |||||||||||||||| |||| ||||| ||         |||||  || ||||||||||||||||||||||||    
T  33733340 tagttagtagagtggttaggtagaatgaaattcaataaataagggtataataat-ggaaaagaataataaatgcttcattggtattctaaagtgacaatt 33733438  T
Q  208 atttt 212  Q
    |||||    
T  33733439 atttt 33733443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 155
Target Start/End: Original strand, 5179378 - 5179524
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    ||||||||||||||  | |||| || |||| |||||||| |||||| |||||||  |||| ||||| ||||||||||||||||     | |||||| |||    
T  5179378 agtcgtttaaggtttgtacacgattcttaacaaaatgattaattgtgttgatttcaatagcaaaatgagtatcatttactaaagttttcatattaattgt 5179477  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||| ||| |||||| |||||||  ||||||||||||    
T  5179478 agttagtggagtagataaattggatgaaattcaggaaataagagtat 5179524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 43500762 - 43500848
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaaca 94  Q
    ||||||||||||||| ||||||| |||||||| |||| || |||||| ||||||||||| ||| ||||||| |||||||||||||||    
T  43500762 tagtcgtttaaggtttatgcacgattattaaggaaattattaattgtgttgattttgatggtataattagtttcatttactaaaaca 43500848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 25089132 - 25089211
Alignment:
Q  77 gtatcatttactaaaacaccctt-attaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||| ||||||||||||| |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  25089132 gtattatttactaaaacatcctttattaattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtat 25089211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 32970548 - 32970683
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |  ||| |||||||||||||||| |||||| |||||||  ||  |||||||| ||| ||||||||||| || | |||||| ||| |    
T  32970548 tcgtttaaggttcgtatacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatattatttactaaaatactcgtattaattgttg 32970647  T
Q  111 ttagtggagtagttaagttggataaaattcaataaa 146  Q
    |||||  | || ||||||||||||||||||||||||    
T  32970648 ttagtaaaataattaagttggataaaattcaataaa 32970683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 4441605 - 4441735
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    ||||||||||||| || ||||||  ||||||| || ||||||||| |    ||||||||||||||||| |||| |||||||||||||||| |||| || |    
T  4441605 ttattaagaaaataattaattgtggtgattttaatggtaaaattaatcgtctttactaaaacacccttgttaattgtagttagtggagtaattaaattag 4441704  T
Q  132 ataaaattcaataaataagagtattataata 162  Q
    || ||||| |||||||||  |||| ||||||    
T  4441705 atgaaatttaataaataaaggtataataata 4441735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 44761541 - 44761663
Alignment:
Q  40 aaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaatt 139  Q
    |||||||| |||| | || ||||| ||  |||||||| ||||||||||||||| | | ||||||| | ||||||||||| | ||||||||| || |||||    
T  44761541 aaaatgattaattatgttaattttaatgataaaattaatatcatttactaaaatatctttattaattatagttagtggaatggttaagttgaatgaaatt 44761640  T
Q  140 caataaataagagtattataata 162  Q
    ||||||||||| |||| ||||||    
T  44761641 caataaataagggtataataata 44761663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 29778434 - 29778515
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||||||||||||| | | ||||||| ||||||||||  || |  ||||||||||||||||||||||||||    
T  29778434 gtaaaattagtatcatttactaaaatatcattattaattgtagttagttaagaacctaagttggataaaattcaataaataa 29778515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 24880956 - 24880874
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagt---taagttggataaaattcaataaat 147  Q
    ||||||||| ||||||||||||||| ||  ||||||| ||||||||||||||||||   |||||||||| |||||||||||||    
T  24880956 gtaaaattaatatcatttactaaaatacttttattaattgtagttagtggagtagttagtaagttggatgaaattcaataaat 24880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 29074997 - 29074885
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||| |||||||| | |||| |||||||| || ||||||||| ||||||||| ||||||| || |||||| ||| ||||  | | ||||||||||||||     
T  29074997 ttaaaaaaatgattagttgtgttgattttaatggtaaaattaatatcatttattaaaacatccatattaattgttgttaacgtaatagttaagttggatg 29074898  T
Q  135 aaattcaataaat 147  Q
    |||||||||||||    
T  29074897 aaattcaataaat 29074885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 35367622 - 35367694
Alignment:
Q  8 tagtcgtttaag-gttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta 79  Q
    |||||||||||| ||| ||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  35367622 tagtcgtttaagcgtttatgcacgattattaagaaaatgattaattgtgttgattttgatggtaaaattagta 35367694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 37539195 - 37539120
Alignment:
Q  80 tcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||| ||||| ||| |||| |||||||||| ||||||||||||| ||| |||||||||||||||| ||||    
T  37539195 tcatttactacaacactcttgttaattgtagttagtagagtagttaagtttgatgaaattcaataaataagggtat 37539120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 32219699 - 32219777
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaa 146  Q
    ||||||||| ||||||||| ||||| || |||||||| | ||||| ||||||| |||||||||||| ||||||||||||    
T  32219699 gtaaaattaatatcatttattaaaatactcttattaattatagtttgtggagtggttaagttggatgaaattcaataaa 32219777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 41080743 - 41080599
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||| |||||||| ||||| |  | |||| |||||||| |||||| |||||||| |||||||||||  ||||||||| | ||| | | |||||    
T  41080743 aataatagtcgattaaggtttatgcatgaattttaaaaaaatgattaattgtgttgattttaatagtaaaatttatatcatttattgaaatatctttatt 41080644  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||| ||||||||| || ||||||||||  ||||||||||||||    
T  41080643 aattgtaattagtggag-aggtaagttggat-gaattcaataaataa 41080599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 9379339 - 9379231
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagt-ggagtagttaagttggataaaatt 139  Q
    ||||||| ||||||| ||||||| ||  |||||||| ||||||||| ||||| |   ||||||| |||||||||| |||||||||||||| ||| |||||    
T  9379339 aaatgattaattgtaatgattttaatgataaaattaatatcatttattaaaatatatttattaattgtagttagtgggagtagttaagtttgatgaaatt 9379240  T
Q  140 caataaata 148  Q
     ||||||||    
T  9379239 taataaata 9379231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 11450028 - 11449883
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| ||||||||||  |||||| |||||||| ||||| | |||| | |||||||  || ||||||||| ||  |||| ||| |||||  |||||    
T  11450028 aataatagttgtttaaggtttgtgcacgattattaaggaaatggttaattatgttgatttcaatggtaaaattaata--attttctataacacatttatt 11449931  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || |||||||| | ||||||| || |||||| ||||||||||||||||    
T  11449930 aattgtagttaatagagtagtaaaattggatgaaattcaataaataag 11449883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 6785304 - 6785249
Alignment:
Q  100 attaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  6785304 attaattgtagttagtggagtagttaagtttgatgaaattcaataaataagggtat 6785249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 27721624 - 27721525
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| || ||||||||| | | ||||| ||||  |||  |||||| |||||||||| || ||||||| |||||||||||||||||||||| |||||    
T  27721624 ttgattttaatggtaaaattatttttatttattaaagtaccaatattaattgtagttagtagaatagttaaattggataaaattcaataaataaaagtat 27721525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 26257951 - 26258065
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| ||||||||||||||  |||| ||||| | ||||||||||||||| ||| |||||||  || |||||| || || ||||||||||| |||  |    
T  26257951 aaatgattaattgtattgatttcaatagcaaaatgattatcatttactaaaatacctttattaatcgtggttagtagaataattaagttggatgaaaacc 26258050  T
Q  141 aataaataagagtat 155  Q
    | |||||||| ||||    
T  26258051 agtaaataagggtat 26258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 22181460 - 22181371
Alignment:
Q  24 atgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||||||||| ||||||| | |||  || ||||  || ||||||||| ||||||||||||||||||||||| | | ||||||||    
T  22181460 atgcacggttattaaggaaatgattagttgagttcatttcaatggtaaaattaatatcatttactaaaacacccttagttattgtagtta 22181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 37177886 - 37177829
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||  |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  37177886 ttattaatggtagttagtatagtagttaagttggataaaattaaataaataagagtat 37177829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 2137437 - 2137488
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||| ||| |||| ||||||| |||||||||||||||||||||||||||    
T  2137437 ttattaattgttgttattggagtatttaagttggataaaattcaataaataa 2137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 15057521 - 15057423
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| ||||||||||||||||||| || |||||||   ||||||| | |||||| ||||||||||||||    ||||| ||||||| |||||||||    
T  15057521 ttgattttaatagtaaaattagtatcatatattaaaacatttttattaattatagtta-tggagtagttaagtgaagtaaaaatcaataagtaagagtat 15057423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 3260643 - 3260589
Alignment:
Q  96 ccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||| |||||||||||||| ||||||||| ||| ||||| ||||||||||    
T  3260643 ccttattaattgtagttagtggagaagttaagtttgatgaaattgaataaataag 3260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 12151255 - 12151193
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||||||||||||||||||| |   | ||||| |||||||||||||| |||||||||||    
T  12151255 taaaattagtatcatttactaaaatattgtaattaattgtagttagtggagcagttaagttgg 12151193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 27897047 - 27896954
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| ||  |||||||||||| |||||  |||| |  |||||||| | |||||||||||||| || |||||||| ||||| |||||||||    
T  27897047 ttgattttaatgataaaattagtataatttatcaaaatattcttattaattatagttagtggagtaatttagttggatgaaatttaataaataa 27896954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 31154241 - 31154121
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||| |||||||| |||||| |||||||| ||  |||||||||||| || |||||||   |  ||||||| ||||||| || ||||  ||||||| |||     
T  31154241 ttaataaaatgattaattgtgttgattttaatgataaaattagtattatctactaaattgcatttattaattgtagttggtagagtgcttaagtttgatg 31154142  T
Q  135 aaattcaataaataagagtat 155  Q
    ||||||| |||||||| ||||    
T  31154141 aaattcagtaaataagtgtat 31154121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 35682879 - 35682919
Alignment:
Q  115 tggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  35682879 tggagtagttaagttggatgaaattcaataaataagggtat 35682919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 43614536 - 43614448
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccc 97  Q
    |||||||||||| |  | ||||| | ||||| ||||||| || ||| |||||||| || ||||||||||||||||| ||||||| ||||    
T  43614536 agtcgtttaaggattgtacacgggttttaaggaaatgattaagtgtgttgattttaatggtaaaattagtatcattgactaaaataccc 43614448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 4659816 - 4659774
Alignment:
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||||||| |||||||| || ||||||||||||||||    
T  4659816 tagttagtggagtaattaagttgaatgaaattcaataaataag 4659774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 13365999 - 13366041
Alignment:
Q  80 tcatttactaaaacacccttattaaatgtagttagtggagtag 122  Q
    ||||||||||||| |||||||||||  ||||||||||||||||    
T  13365999 tcatttactaaaatacccttattaatagtagttagtggagtag 13366041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 44426783 - 44426845
Alignment:
Q  75 tagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaa 137  Q
    |||||||||||||||||||| | ||||||| |||| ||||||||| | |||||| ||| ||||    
T  44426783 tagtatcatttactaaaacatctttattaattgtaattagtggagcaattaagtgggaaaaaa 44426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 3312218 - 3312137
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtag 122  Q
    ||||||| |||||| |||||||| ||  | ||||||||||||||||||| || |    |||||| |||||||||||||||||    
T  3312218 aaatgattaattgtgttgattttaatgattaaattagtatcatttactataatattgatattaattgtagttagtggagtag 3312137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 6267829 - 6267918
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaa 92  Q
    |||| |||||||||||||||  |||||  || ||||  ||||||| |||||| |||||||| ||  ||||| ||||||||| ||||||||    
T  6267829 aataatagtcgtttaaggtttgtgcactatttttaaagaaatgattaattgtgttgattttaatgataaaactagtatcatgtactaaaa 6267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 9412841 - 9412922
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||| | |||||| ||||| |  || ||||| |||||||| |||| |||||  ||||||| |||||||||||||||    
T  9412841 gtaaaattagaagcatttaataaaatattctgattaattgtagttaatggaatagttgggttggatgaaattcaataaataa 9412922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 52837360 - 52837283
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataa 145  Q
    ||||||||| | |||  |||||||| || |||||||| ||||| |||||||||||||||  || || |||||||||||    
T  52837360 gtaaaattaatttcaactactaaaatactcttattaattgtagctagtggagtagttaatatgaatgaaattcaataa 52837283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 6365738 - 6365650
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagtt 129  Q
    ||||||| |||||| |||||||  ||| | |||||||||| ||||| ||||| | | || |||| ||||||||||| | ||||||||||    
T  6365738 aaatgattaattgtgttgatttcaataatcaaattagtattatttattaaaatatcattgttaattgtagttagtgaattagttaagtt 6365650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 212
Target Start/End: Original strand, 16395198 - 16395226
Alignment:
Q  184 cattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||    
T  16395198 cattggtattctaaagtgacaattatttt 16395226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 26000810 - 26000846
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaa 92  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  26000810 ttgattttgatggtaaaattattatcatttactaaaa 26000846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 15359055 - 15359213
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||  |||||||| |||||||||||||||||||||||||    
T  15359055 aataatagtcgtttaaggttgatgcacggttattaagaagatgattaattgtgttgattttgatgataaaattaatatcatttactaaaacacccttatt 15359154  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  15359155 aattgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat 15359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 36794429 - 36794271
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| |||||||| |||||||||| ||||||| |||||| ||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  36794429 aataatagtcgtttaagattgatgcatggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcttttactaaaacgcccttatt 36794330  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  36794329 aactgtagttagtggagtagttaagttggatgaagttcaataaataagggtattataat 36794271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 39785733 - 39785522
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta---tcatttactaaaacaccctt 99  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||   |||||||||||||||| |||    
T  39785733 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtactatcatttactaaaacactctt 39785634  T
Q  100 attaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaag 199  Q
    ||||| |||||||| ||||||||||||||||||| || ||||||||||||| |||||||||| ||          ||||  |||||||||||||||||||    
T  39785633 attaattgtagttaatggagtagttaagttggatgaagttcaataaataagggtattataat-gggaaaaaatagtaaatgctgcattggtattctaaag 39785535  T
Q  200 tgacaattatttt 212  Q
    |||||||||||||    
T  39785534 tgacaattatttt 39785522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 16463834 - 16463688
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16463834 aataatagtcgtttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacacccttatt 16463735  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||||||||||| ||||| ||| ||||| |||||||||    
T  16463734 aattgtagttagtggagtagtaaagtttgatgaaatttaataaataa 16463688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 25637625 - 25637417
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||||||| ||||||| |||| ||| ||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  25637625 aataatagttgtttaaggtttatgcacgattat-aaggaaatgattaattgtgttgattttgatggtaaaattagtgtcatttactaaaacacctttatt 25637527  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || ||||||||  |||||||||||||||||| ||||| |||||||||| || | ||||| |          |||||  ||||||||||||||||||||||    
T  25637526 aattgtagttataggagtagttaagttggatgaaatttaataaataagggtgtaataatggaaaaaaaataataaatgctgcattggtattctaaagtga 25637427  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  25637426 caattatttt 25637417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 5789616 - 5789762
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||||||  |||||| |||||||| ||||||| ||||||||||| ||  ||||||||||||||  ||||||||||||||||||||||    
T  5789616 aatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacacccttatt 5789715  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||| | |||||||||||||| |||||||||||||||    
T  5789716 aattgtagttagtgaaatagttaagttggatgaaattcaataaataa 5789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 31448666 - 31448808
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||| ||||||| |||||| ||||||||||| ||||||||||  ||||||||||||||||||||| ||| ||    
T  31448666 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattagagtcatttactaaaacacccttactaattg 31448765  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
     |||||||| | |||||||||||||| ||||||||||||||||    
T  31448766 cagttagtgaaatagttaagttggatgaaattcaataaataag 31448808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 36354411 - 36354618
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| ||||||||| ||| ||| |||||||| ||||||  | |||| ||||||||||| ||||||||||||| ||||| | |||||| ||||||    
T  36354411 aataatagtcatttaaggtttatgtacgattattaaggaaatgactagttgtgttgattttgatggtaaaattagtattatttattgaaacactcttatt 36354510  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||||||||||||| |||||||||||||||  |||| |||||  |         |||||  ||||||||||||||||||||||    
T  36354511 aattgtagttagtggagtagttaagttggatgaaattcaataaataatggtataataat--ggaaaaaataataaattctgcattggtattctaaagtga 36354608  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  36354609 caattatttt 36354618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 37322569 - 37322415
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaag-aaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaat 106  Q
    ||||||||||||||| ||||||| |||||||| ||||||||  ||||| |||||||  || ||||||||| ||||||||| ||||| ||||||||||| |    
T  37322569 tagtcgtttaaggtttatgcacgattattaaggaaaatgattgattgtgttgatttcaatggtaaaattaatatcatttattaaaatacccttattaatt 37322470  T
Q  107 gtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  37322469 gtagttagtggagtagttaagttagatgaaattcaataaataagggtataataat 37322415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 16806021 - 16805879
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||||| |||||||  ||||||| |||||| |||||||| |||||||||||||||||||||||||||| | ||||||||| ||    
T  16806021 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattg 16805922  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||||||| |||||||||||| ||||| |||| |||||    
T  16805921 tagttagtggagttgttaagttggattaaatttaatagataag 16805879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 16845302 - 16845160
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||||| |||||||  ||||||| |||||| |||||||| |||||||||||||||||||||||||||| | ||||||||| ||    
T  16845302 tagtagtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgattttaatagtaaaattagtatcatttactaaaatatccttattaattg 16845203  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||||||| |||||||||||| ||||| |||| |||||    
T  16845202 tagttagtggagttgttaagttggattaaatttaatagataag 16845160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 34120416 - 34120613
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    ||||||| ||| ||||| | |||||||||||||||| |||||| ||||||||||| |||||| |||||| ||||||||||| |   ||||||| ||||||    
T  34120416 cgtttaaagtttatgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaactagtattatttactaaaata--tttattaattgtagt 34120513  T
Q  112 tagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattattt 211  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||| ||||| ||         |||||  ||||||||||||| |||||||||||||||||    
T  34120514 tagtggaatagttaagttggatgaaattcaataagtaagagtataataat-ggaaaaaaataataaatgctgcattggtattttaaagtgacaattattt 34120612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 213
Target Start/End: Complemental strand, 34225725 - 34225526
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  |||||| |||||||| ||||||  |||| |||||||||| || ||||| ||||||| ||||||||||||||||||||||| |||||||    
T  34225725 gtttaaggtttgtgcacgattattaaggaaatgaataattatattgattttaatggtaaacttagtattatttactaaaacacccttattaattgtagtt 34225626  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    | ||||||| |||||||| || ||||| |||||||||| |||| ||||| |          ||||| ||||||||||||||| |||||||||||||||||    
T  34225625 aatggagtatttaagttgaatgaaatttaataaataagggtataataat-gaaaaaaaataataaatactgcattggtattccaaagtgacaattatttt 34225527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 45235726 - 45235579
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| |||||||  ||||| |||||||  || ||||||||| |||||||||||||||||||||||||    
T  45235726 aataatagtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttatt 45235627  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || |||||||| || | |||||||||| ||| ||||||||||||||||    
T  45235626 aattgtagttaatgaaatagttaagtttgatgaaattcaataaataag 45235579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 35314014 - 35313880
Alignment:
Q  21 ttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagt 120  Q
    |||||||||| |||||||| ||||||| |||||| |||||||  || ||||||||||||  ||||| |||| || ||||||||| |||||||||||||||    
T  35314014 ttgatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagtatttattaaagcaaccttattaattgtagttagtggagt 35313915  T
Q  121 agttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||| ||| |||||||||||||||||||||    
T  35313914 agttaagtttgatgaaattcaataaataagagtat 35313880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 39691627 - 39691477
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |||||| |||||||||||||||| |||||| |||||||  ||  |||||||| ||||||||||||||| || |||||||| || ||    
T  39691627 tcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatactcttattaattgcag 39691528  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||| |||||| || |||||||||||||||| |||| |||||    
T  39691527 ttagtggagtagtaaagttgaatgaaattcaataaataagggtataataat 39691477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 11742495 - 11742649
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| ||||||||||| ||| ||||||| ||||||||||| |  | |||||||||||||||||| ||||| | | ||| ||||| |||||||||||||    
T  11742495 ataatattagtcgtttaacgtttatgcacgattattaagaaattttttaattgtattgattttgatggtaaa-tcaatattatttattaaaacaccctta 11742593  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtatt 156  Q
    |||| |||||||| ||||||||||||||| ||| || ||||||||||||| |||||    
T  11742594 ttaattgtagttaatggagtagttaagtttgatgaagttcaataaataagggtatt 11742649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 14523345 - 14523487
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| ||| ||||| |||||||||| |||||||   |||| |||||||  || ||||||||| ||||||||||||||| | ||||||||| ||    
T  14523345 tagtcgtttaaagtttatgcaaggttattaaggaaatgattttttgtgttgatttcaatggtaaaattaatatcatttactaaaatatccttattaattg 14523444  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||    
T  14523445 tagttagtggagtagttaagttagatgaaattcaattaataag 14523487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 104
Target Start/End: Complemental strand, 32783498 - 32783408
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa 104  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| ||||||||||||||||||| |||||||    
T  32783498 tttaaggttgatgcacggttattaagaaaatgattaattgtgtttattttgatagtaaaattaatatcatttactaaaacacctttattaa 32783408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 8947049 - 8947178
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||| ||||||| |||||| |||||||  ||  |||||||||||  ||||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  8947049 ttattaaggaaatgattaattgtgttgatttcaatgataaaattagtaatatttactaaaacatccttattaattatagttagtggagtagttaagttgg 8947148  T
Q  132 ataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||| |||| |||||    
T  8947149 atgaaattcaataaataagggtataataat 8947178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 17695467 - 17695323
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |||||| |||||||| ||||||| ||||||||||||||  || ||||||||  |||||||||| |||| |  |||||||| | |||    
T  17695467 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattgatatcatttacaaaaatattcttattaattatag 17695368  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||    
T  17695367 ttagtagagtagttaagttggatgaaattcaataaataagggtat 17695323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 212
Target Start/End: Original strand, 9458267 - 9458441
Alignment:
Q  31 gttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 130  Q
    |||||||||||||| || |||||| ||||||||||| ||||||||||| |     | ||||||||||||||||| |||||||||||||||||| ||||||    
T  9458267 gttattaagaaaataattaattgtgttgattttgatggtaaaattagtgt-----attaaaacacccttattaattgtagttagtggagtagtaaagttg 9458361  T
Q  131 gataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    ||| ||||| |||||||||| |||| |||||  |         |||||  ||||||||||||||||||||||||||||||||    
T  9458362 gatgaaatttaataaataagggtataataat--ggaaaaaataataaatgctgcattggtattctaaagtgacaattatttt 9458441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 43410566 - 43410413
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||| ||||| |||  |||||| |||||||| |||| || |||||| ||||| |  ||  |||||||| ||||||||||||||| | ||||||||| ||    
T  43410566 tagtcctttaatgtttgtgcacgattattaaggaaattattaattgtgttgatatcaatgataaaattaatatcatttactaaaatatccttattaattg 43410467  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||| |||||||||||||||| || ||||||||||||| ||||||| |||||    
T  43410466 tagttaatggagtagttaagttgaatgaaattcaataaatgagagtataataat 43410413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 16377632 - 16377780
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||| ||  |||||| |||||||  ||||||| |||||| ||||||   || ||||||||| |||||||||| |||| | ||||||||| |||||    
T  16377632 tcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattacaatggtaaaattaatatcatttaccaaaataaccttattaattgtag 16377731  T
Q  111 ttagtggagtag----ttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||    ||||||||||| ||||||||||||||| |||||    
T  16377732 ttagtggagtagttaattaagttggatgaaattcaataaataaaagtat 16377780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 43699596 - 43699716
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||||||||||| || ||| |||||||  |||||||||||||||||||||| ||||| || | ||||||   |  ||||||||||| |||||||||    
T  43699596 ttattaagaaaatgattaactgtgttgatttcaatagtaaaattagtatcatttattaaaatacacctattaa---tttttagtggagtaattaagttgg 43699692  T
Q  132 ataaaattcaataaataagagtat 155  Q
    ||||||||||||||| ||| ||||    
T  43699693 ataaaattcaataaacaagggtat 43699716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 39329663 - 39329777
Alignment:
Q  36 taagaaaatgataaattgt--attgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggat 133  Q
    |||||||||||| ||||||  ||||||||  ||  |||||||| || ||||||||||||||| |||||||| |||||||| |||||||||||| ||||||    
T  39329663 taagaaaatgatcaattgtgtattgatttcaatgataaaattaatagcatttactaaaacactcttattaattgtagtta-tggagtagttaaattggat 39329761  T
Q  134 aaaattcaataaataa 149  Q
     |||||||||||||||    
T  39329762 gaaattcaataaataa 39329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 35242311 - 35242417
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||||| |||||||| ||  ||||||||| ||||||||||| || |   ||||||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  35242311 aattgtgttgattttaatgttaaaattagaatcatttactagaatatatttattaattgtagttagttgagtagttaagttggatgaaattcaataaata 35242410  T
Q  149 agagtat 155  Q
    | |||||    
T  35242411 aaagtat 35242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 43115775 - 43115909
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| |||  ||| || |||||||  ||||||| |||||| |||||||  ||  |||| |||||| |||||||||||| || |||||| | ||    
T  43115775 tagtcgtttaaagtttgtgcgcgattattaaagaaatgattaattgtgttgatttcaatgataaagttagtagcatttactaaaatactcttatttattg 43115874  T
Q  108 tagttagtggagtagttaagttggataaaattcaa 142  Q
    ||||||||||||||||||||||| || ||||||||    
T  43115875 tagttagtggagtagttaagttgaatgaaattcaa 43115909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 17346394 - 17346476
Alignment:
Q  67 agtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||| ||||||||| ||||| |   ||||||| |||||||||||||||||||||||||||  |||||||||||||||    
T  17346394 agtaaaattaatatcatttattaaaatatttttattaattgtagttagtggagtagttaagttggaagaaattcaataaataa 17346476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 212
Target Start/End: Original strand, 7494906 - 7495015
Alignment:
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||            |||||  ||||||||||||||||||||||    
T  7494906 aaatgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataatgaaaaaaaaataataaatgctgcattggtattctaaagtga 7495005  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  7495006 caattatttt 7495015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 32831208 - 32831289
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||| ||||||||||||||||| | ||||||| |||||||| |||||||||||| |  ||| |||||||||||||||    
T  32831208 gtaaaattaatatcatttactaaaacatctttattaattgtagttattggagtagttaaatgagatgaaattcaataaataa 32831289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 18202152 - 18202040
Alignment:
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagt 200  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||  |||||||||| ||         | |||  |||||||||||||| |||||    
T  18202152 ttaaatgtagttagtgaagtagttaagttggatgaaatttaataaataaatgtattataatgggaaaaaaataacaaatgctgcattggtattcgaaagt 18202053  T
Q  201 gacaattatttta 213  Q
    |||||||||||||    
T  18202052 gacaattatttta 18202040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 19937436 - 19937384
Alignment:
Q  97 cttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  19937436 cttattaattgtagttagtggagtagttaagttgaataaaattcaataaataa 19937384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 19937817 - 19937733
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaa 92  Q
    |||||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  || ||||||||| |||||||||||||||    
T  19937817 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaa 19937733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 3323335 - 3323390
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagt 153  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  3323335 ttattaattgtagttagtggagtagttaagttggatgaaattcaataagtaagagt 3323390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 43730705 - 43730609
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| || ||||||||| ||||||||||||||  | ||||||||| |||||||| | |||||||||||| || | ||||||||||||||| |||||    
T  43730705 ttgattttaatggtaaaattaatatcatttactaaa--aaccttattaattgtagttactagagtagttaagtagg-tgaaattcaataaataaaagtat 43730609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 161
Target Start/End: Original strand, 26608178 - 26608269
Alignment:
Q  70 aaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||| ||||||||||||||| || |||||||| | ||||||||||| ||||||||||| || ||| | | |||||||| |||| |||||    
T  26608178 aaaattaatatcatttactaaaatactcttattaattatagttagtggattagttaagttgaatgaaaataattaaataagggtataataat 26608269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 26863405 - 26863472
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||| ||||||||  ||||||| ||||||||||||||||||||||| |||| ||||||| |||||||    
T  26863405 atttattaaaacacttttattaattgtagttagtggagtagttaagtcggatgaaattcattaaataa 26863472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 31976465 - 31976370
Alignment:
Q  31 gttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    ||||||||| ||||||| | | || |||||||  ||||||||||  || |||||||||||||||| |||| ||| | |||||||||||||||||||    
T  31976465 gttattaaggaaatgattagtagtgttgatttcaatagtaaaatatgtttcatttactaaaacactcttaataattatagttagtggagtagttaa 31976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 5272204 - 5272265
Alignment:
Q  100 attaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||| |||||||||||||||| |||| |||||| |||||||||||||||| |||| |||||    
T  5272204 attaattgtagttagtggagtaattaaattggatgaaattcaataaataagggtataataat 5272265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 18853243 - 18853316
Alignment:
Q  77 gtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||||| |||| || |||||||  |||||||||| ||||| |||| |||||| ||||||||||||||||    
T  18853243 gtatcatttaccaaaatactcttattagttgtagttagtagagtaattaatttggatgaaattcaataaataag 18853316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 19426563 - 19426467
Alignment:
Q  41 aaatgataaattgtattgattttgatag-taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaa 136  Q
    ||||||| |||||| |||||||| |  | ||||||||| | |||||||||||| | | ||||||| |||||| ||| ||||||||||||||||||||    
T  19426563 aaatgattaattgtgttgattttcaatgataaaattagcaacatttactaaaatatcattattaattgtagtaagtcgagtagttaagttggataaa 19426467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 28186294 - 28186213
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||  |||||||| ||||| | ||||||| | | |||||||  |||||||||||||| || |||||||||||||||    
T  28186294 gtaaaattataatcatttattaaaatatccttattcattttagttagcagagtagttaagttgaatgaaattcaataaataa 28186213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 38187916 - 38187969
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagta 121  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||| |||||    
T  38187916 gtaaaattagtttaatttactaaaacacccctattaattgtagttagtcgagta 38187969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 3323254 - 3323330
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta 79  Q
    |||| |||||||||||||||  |||||| ||||||  |||||||| |||||| |||||||  || ||||||||||||    
T  3323254 aatattagtcgtttaaggtttgtgcacgattattataaaaatgattaattgtgttgatttcaatggtaaaattagta 3323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 3601464 - 3601416
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtg 116  Q
    |||||| ||||  |||||||||||||||||||||||| |||||||||||    
T  3601464 gtaaaaatagttgcatttactaaaacacccttattaattgtagttagtg 3601416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 19444225 - 19444133
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||| ||| |||||||||||     ||||||| |||| ||||| ||||||||||| |||||||| ||||||||| ||| |||| |||||    
T  19444225 taaaattaatattatttactaaaatgttattattaattgtaattagtcgagtagttaagatggataaatttcaataaacaagggtataataat 19444133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 147
Target Start/End: Original strand, 41220954 - 41221058
Alignment:
Q  43 atgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaa 142  Q
    ||||| |||||| |||||||  ||  |||||||||||||||||| ||||| |   ||||||| |||||||| || |||||||||||  ||| || |||||    
T  41220954 atgattaattgtgttgatttcaattataaaattagtatcatttattaaaatatttttattaattgtagttaatgaagtagttaagtcagatgaagttcaa 41221053  T
Q  143 taaat 147  Q
    |||||    
T  41221054 taaat 41221058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 10005099 - 10005181
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaa 92  Q
    ||||||||||||||  |||||  |||| ||||||||||| |||||| |||||||    | ||||||||||||||||||||||||    
T  10005099 agtcgtttaaggtttgtgcacatttat-aagaaaatgatcaattgtgttgatttcagcaataaaattagtatcatttactaaaa 10005181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 16463655 - 16463624
Alignment:
Q  181 ctgcattggtattctaaagtgacaattatttt 212  Q
    ||||||||||||||||||||||||||||||||    
T  16463655 ctgcattggtattctaaagtgacaattatttt 16463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 28170616 - 28170703
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||  |||||||||  ||| | ||||||| |||||||| | || || |||| |||||| |||||| ||||||||||||||    
T  28170616 gtaaaattagttgcatttactagtacagctttattaattgtagttaatagaataattaaattggatgaaattctataaataagagtat 28170703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39443860 - 39443789
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaa 72  Q
    |||||| |||||||||||||||  |||||  |||||||||||||||| |||| | |||||||  ||||||||    
T  39443860 ataatattagtcgtttaaggtttgtgcacaattattaagaaaatgattaattttgttgatttcaatagtaaa 39443789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 26607946 - 26608008
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaatt 75  Q
    ||||||||||  |||||| |||||||||||||||| |||||| |||||||  || ||||||||    
T  26607946 gtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaatt 26608008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Original strand, 1206736 - 1206781
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||||| |||||||||||| | ||||||||| ||||||||    
T  1206736 gtaaaattagtaacatttactaaaatatccttattaattgtagtta 1206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 8928584 - 8928547
Alignment:
Q  174 ataaagactgcattggtattctaaagtgacaattattt 211  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  8928584 ataaatactgcattggtattataaagtgacaattattt 8928547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 26337142 - 26337211
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    |||||||| ||  |||||||  ||||||||| |||||||||  |||||| | ||||||||||||||||||    
T  26337142 ttgattttaatgttaaaattgatatcatttattaaaacacctctattaattatagttagtggagtagtta 26337211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 27501513 - 27501586
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcat 83  Q
    |||||||||||||  || | | |||||||| |||||||||||| | |||||||  || ||||||||||||||||    
T  27501513 gtcgtttaaggtttgtgtatgattattaaggaaatgataaattatgttgatttcaatggtaaaattagtatcat 27501586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 1206775 - 1206811
Alignment:
Q  119 gtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  1206775 gtagttaagttggatgaaattcaataaatatgagtat 1206811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 7438932 - 7438972
Alignment:
Q  115 tggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||| || |||||||||||||||| ||||    
T  7438932 tggagtagttaagttgaatgaaattcaataaataagggtat 7438972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 42935813 - 42935652
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  42935813 aataatagtcgtttaaggttgatgcacggttattaagaaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttatt 42935714  T
Q  103 aaatgtagttagt---ggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || ||||||||||   |||| ||||||||||||| || ||||||||||||||||||||||||    
T  42935713 aattgtagttagtggaggaggagttaagttggatgaagttcaataaataagagtattataat 42935652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 212
Target Start/End: Complemental strand, 43874070 - 43873867
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  43874070 tagtcgtttaaggttgatgcatggttattaaagaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacccttattaaatg 43873971  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaatt 207  Q
    |||||||||||||||||||||||||| || || |||||||||  |||||||||| ||         |||||  |||||||| ||||||||||||||||||    
T  43873970 tagttagtggagtagttaagttggatgaagtttaataaataaatgtattataat-gggaaaaaataataaatgctgcattgatattctaaagtgacaatt 43873872  T
Q  208 atttt 212  Q
    |||||    
T  43873871 atttt 43873867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 83537 - 83328
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||  |||||||| ||||||| |||||| ||||||||||| |||||||||||||||||||||||||||  ||||||    
T  83537 aataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacattcttatt 83438  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || ||||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||| |          |||||  ||||||||||||||||||||||    
T  83437 aattgtagttagcggagtagttaagtttgatgaaattcaataaataagagtatgataatggaaaaaaaataataaatgctgcattggtattctaaagtga 83338  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  83337 caattatttt 83328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 28202286 - 28202494
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||||||| ||||||||||||||||||||| || |||||| ||||||||||| ||||||||| | ||||||||||||||| |||||||    
T  28202286 aataatagttgtttaaggtttatgcacggttattaagaaaataattaattgtgttgattttgatggtaaaattaatgtcatttactaaaacatccttatt 28202385  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| ||         |||||  ||| ||||||||||||||||||    
T  28202386 aattgtagttagtggagtagtaaagttggatgaaattcaataaataagagtataataat-ggaaaaaaataataaatgctgtattggtattctaaagtga 28202484  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  28202485 caattatttt 28202494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 759068 - 759276
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| ||||||||| ||||||  |||||||| ||||||| |||||| ||||||||||| |||||| |||||||||||||||||||| |||||||    
T  759068 aataatagtcatttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtatcatttactaaaacatccttatt 759167  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || ||||||||| |||||||||||||||||| |||||||||||||||| |||| ||||| ||         |||||  ||||||||||||||||||||||    
T  759168 aattgtagttagcggagtagttaagttggatgaaattcaataaataagggtataataat-ggaaaaaaataataaatgctgcattggtattctaaagtga 759266  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  759267 caattatttt 759276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 11373405 - 11373557
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||| |  |||||| |||||||| ||||| | |||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  11373405 aatattagtcgtttaaggattgtgcacgattattaaggaaatgtttaattgtgttgatttcgatggtaaaattagtagcatttactaaaacacccttatt 11373504  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11373505 aattgtagttagtggagtagttaagttggatgaaattcaataaataagagtat 11373557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 27921140 - 27920982
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||| |||| | |||||||| || ||||||||||||||||||| |||||||| ||||||    
T  27921140 aataatagttgtttaaggttgatgcacagttattaagaaaatgattaattatgttgattttaatggtaaaattagtatcatttattaaaacactcttatt 27921041  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || ||||||||||| | |||||||||||||| || |||||| |||||||||||||||||    
T  27921040 aattgtagttagtgcattagttaagttggatgaagttcaatcaataagagtattataat 27920982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 38391892 - 38391742
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||||||  |||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  38391892 tcgtttaaggtttatgcacaattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaacactcttgttaattgtag 38391793  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||| || ||||||||||| ||||||||||||||| ||||| |||||    
T  38391792 ttagtggaataattaagttggatgaaattcaataaataaaagtataataat 38391742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 160
Target Start/End: Complemental strand, 9786140 - 9785983
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||   |||||| |||||||| ||||||| |||||| ||||||||||| ||||||||| | |||||||||||||||| ||||||    
T  9786140 aataatagtcgtttaaggtctgtgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatttcatttactaaaacacgcttatt 9786041  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataa 160  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  9786040 aattgtagttagtgaagtagttaagttggataaaattcaataaataagggtataataa 9785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 41506054 - 41506194
Alignment:
Q  15 ttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttag 114  Q
    |||||||| ||||||| |||||||| ||||||| |||||| || ||||| || |||||||||||| ||||||||||||||| |||||||| |||||||||    
T  41506054 ttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttaatggtaaaattagtagcatttactaaaacactcttattaattgtagttag 41506153  T
Q  115 tggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  41506154 tggagtagttaagttggatgaaattcaataaataagagtat 41506194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 21759966 - 21760103
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||| | |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||    
T  21759966 tagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgattttgatggtaaaattagtatcatttaataaaacacccttactaattg 21760065  T
Q  108 tagttagtggagtagttaagttggataaaattcaataa 145  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  21760066 tagttaatggagtagttaagttggatgaaattcaataa 21760103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 34947652 - 34947444
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||| | |||||||  ||||||| |||||| |||||||  || ||||||||| |||||||||||||||||||||||||    
T  34947652 aataatagtcgtttaaggtttgtgcatgtttattaaagaaatgattaattgtgttgatttcaatggtaaaattattatcatttactaaaacacccttatt 34947553  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||||||||||||| ||||||||||||| || |||| ||||| ||         |||||   |||||||||||||||||||||    
T  34947552 aattgtagttagtggagtagttaagttggatgaaattcaataaatgagggtataataat-ggaaaaaaataataaatgttgcattggtattctaaagtga 34947454  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  34947453 caattatttt 34947444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 21390441 - 21390289
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    |||||||||||||| ||||||| |||||||| ||||||| |||||| || |||||||| |||||| || ||||||||||||||||| ||||||| | |||    
T  21390441 agtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttaattttgatggtaaaactaatatcatttactaaaacatccttattgattgt 21390342  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  21390341 agttagtggagtagttaagttagatgaaattcaataaataagggtataataat 21390289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 3178186 - 3178333
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||| | |||||||| |||||||  ||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||    
T  3178186 tagttgtttaaggtttgtgcatgattattaagtaaatgattgattgtgttgattttgatggtaaaattaatatcatttactaaaacacctttattaattg 3178285  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  3178286 tagttagtggagtagttaagttggatgaaattcaataaataagggtat 3178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 24516271 - 24516412
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||| || |||| ||||||| |||||||| |||||| |||||||  || |||||||||||| |||||||||||| | ||||||||| ||    
T  24516271 tagtcgtttaaggtttatacacgattattaataaaatgattaattgtgttgatttcaatggtaaaattagtaacatttactaaaaaaaccttattaattg 24516370  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  24516371 tagttagtggagtagttaagttggatgaaattcaataaataa 24516412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 44424287 - 44424138
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||||||   ||||||||      |||||||||    
T  44424287 aataatagtcgtttaaggttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaatta---tcatttac------acccttatt 44424197  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||||    
T  44424196 aaatgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataat 44424138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 46478268 - 46478422
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| ||||||||||| ||| || |||| |||||||  ||||||| |||||| || ||||| |||||||| |||||| |||||||||||| |||||||    
T  46478268 ataatattagtcgtttaaagttcatacacgattattaattaaatgattaattgtgttaattttaatagtaaagttagtagcatttactaaaataccctta 46478367  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||| |||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  46478368 ttaattgtagttaattgagtagttaagttggatgaaattcaataaataagagtat 46478422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 28103878 - 28103733
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||||||||||||  |||||| |||||||||||||||| |||||| |||||||  || |||||||||| | ||||||| |||||||||||||||| ||||    
T  28103878 gtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagcagcatttaccaaaacacccttattaattgta 28103779  T
Q  110 gttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  28103778 gttagtgaagtggttaagttggatgaaattcaataaataagcgtat 28103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 149
Target Start/End: Complemental strand, 7463366 - 7463219
Alignment:
Q  2 taatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttat 101  Q
    ||||| ||||||||||||| |  ||||||||||||||| ||||||| |||||| |||||||  ||  ||||||||||| |||||||| ||| ||||| ||    
T  7463366 taatattagtcgtttaaggattgtgcacggttattaaggaaatgattaattgtgttgatttcaatgataaaattagtagcatttacttaaataccctcat 7463267  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  7463266 taattgtagttagtggagtagttaagttggatgaaattcaataaataa 7463219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 40076467 - 40076262
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||  ||||||| |||||| || |||||||| ||||||||||||||||||||||||||||  |||||    
T  40076467 aataatagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgttaattttgatggtaaaattagtatcatttactaaaacactattatt 40076368  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||| |||   || |||||||||||||| |||||||||||||||| || | ||||| ||         |||||  ||||||||||||| ||||||||    
T  40076367 aattgtactta---gattagttaagttggatgaaattcaataaataagggtgtgataat-ggaaaaaaataataaatgctgcattggtattataaagtga 40076272  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  40076271 caattatttt 40076262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 13962111 - 13961965
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| ||||||||| ||||||| |||||||| ||||||| |||||| |||||||| ||  |||||||| ||||| ||| ||||| | |||||||    
T  13962111 aataatagtcatttaaggtttatgcacgtttattaaggaaatgattaattgtgttgattttaatgataaaattaatatcacttaataaaatatccttatt 13962012  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||||||||||||||||||||| ||||| |||||||||    
T  13962011 aagtgtagttagtggagtagttaagttggatgaaatttaataaataa 13961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 16560547 - 16560677
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||| || ||||||| |||||||| ||||||| |||||| || |||||||| |||||| |||||||||||||||||||| |||||||    
T  16560547 aataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttatt 16560646  T
Q  103 aaatgtagttagtggagtagttaagttggat 133  Q
    || |||||||||||| |||||||||||||||    
T  16560647 aattgtagttagtggggtagttaagttggat 16560677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 16605115 - 16604985
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||| || ||||||| |||||||| ||||||| |||||| || |||||||| |||||| |||||||||||||||||||| |||||||    
T  16605115 aataatagtcatttaagatttatgcacgattattaaggaaatgattaattgtgtttattttgatggtaaaactagtatcatttactaaaacatccttatt 16605016  T
Q  103 aaatgtagttagtggagtagttaagttggat 133  Q
    || |||||||||||| |||||||||||||||    
T  16605015 aattgtagttagtggggtagttaagttggat 16604985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 2459621 - 2459471
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  |||||| |||||||| ||||||| |||||| |||||||  |  |||||||||||  ||||||||| ||||||||||||    
T  2459621 aatattagtcgtttaatgtttgtgcacgattattaaggaaatgattaattgtgttgatttcaacggtaaaattagt--catttactacaacacccttatt 2459524  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  2459523 aattgtagttagtggagtagttaagtaggatgaaattcaataaataagggtat 2459471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 48609009 - 48608860
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||| ||||| ||||| | |||||||| ||||||| |||||| ||||||||||| |||||| ||||||    |||||||||| |||||||||  |    
T  48609009 tagtcgtttgaggtttatgcatgattattaaggaaatgattaattgtgttgattttgatggtaaaactagtat----tactaaaacatccttattaatcg 48608914  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||| |||||    
T  48608913 tagttagtgatgtagttaagttggatgaaattcaataaataagagtataataat 48608860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 21350605 - 21350811
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| |||| |   ||||| |||||||  || |||||| ||||   |||||||||||||||||||||    
T  21350605 aatattagtcgtttaaggtttgtgcacgattattaaggaaatta---attgtgttgatttcaatggtaaaaatagttgtatttactaaaacacccttatt 21350701  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||||||||||||||| |||||||||||||||| |||| ||| | |          |||||  ||||||||||||| ||||||||    
T  21350702 aattgtagttagtggagtagttaagttggatgaaattcaataaataagggtataatagtggaaaaaaaataataaatgctgcattggtattgtaaagtga 21350801  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  21350802 caattatttt 21350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 22738853 - 22738707
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||  ||||||| |||||| | |||||  || ||||||||||||||||||||||||| | ||| |||    
T  22738853 aatattagtcgtttaaggtttatgcacgattattaaagaaatgattaattgtgtagatttcaatggtaaaattagtatcatttactaaaatatcctcatt 22738754  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||| || |||||||||||||| ||||| |||||||||    
T  22738753 aattgtagttagtagattagttaagttggatgaaatttaataaataa 22738707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 34100553 - 34100676
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||| |||||||||||| | | ||||||| |||||||| || ||||||||||||||    
T  34100553 ttattaagaaaatgattaattgtgttgatttcaatagtaaaattagtagcatttactaaaatatctttattaattgtagttactgaagtagttaagttgg 34100652  T
Q  132 ataaaattcaataaataagagtat 155  Q
    || | |||||||||||||| ||||    
T  34100653 atgacattcaataaataagggtat 34100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 8592417 - 8592578
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||| |||||||||||  |||| | |||||||  ||||||| |||||| |||||||  || || |||||||||  ||||| |||||||||||||||    
T  8592417 aatattagccgtttaaggtttgtgcatgattattaaagaaatgattaattgtgttgatttcaatggttaaattagtagtatttaataaaacacccttatt 8592516  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataatagg 164  Q
    || |||||||||||||||||| ||||| ||| ||||| ||||||||||||||| ||| ||||    
T  8592517 aattgtagttagtggagtagtaaagttagatgaaatttaataaataagagtataatagtagg 8592578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 7457420 - 7457550
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    |||||| ||||||| |||||||| |||| | |||||||  || |||||||||||  |||||||||||| ||||||||||||||||||||| ||| || ||    
T  7457420 tgcacgattattaaaaaaatgattaattatgttgatttcaatggtaaaattagttacatttactaaaagacccttattaaatgtagttagcggaataatt 7457519  T
Q  125 aagttggataaaattcaataaataagagtat 155  Q
    |||||  || |||||||||||||||||||||    
T  7457520 aagttaaattaaattcaataaataagagtat 7457550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 26974176 - 26974032
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcat---ttactaaaacacccttattaa 104  Q
    |||||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  || ||||||||| ||||||   ||||||||| || ||||||||    
T  26974176 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatcatttactaaaatactcttattaa 26974077  T
Q  105 atgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
     ||||||||||||||||||||||||| || ||||| | |||||||    
T  26974076 ttgtagttagtggagtagttaagttgaatgaaatttattaaataa 26974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 5524525 - 5524396
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    ||||||||| |||  |||||| |||||||||||||||| |||||| |||||||  || |||||||||||| |||||| ||||||||  ||||||| | ||    
T  5524525 gtcgtttaaagtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtaacatttaataaaacacttttattaattata 5524426  T
Q  110 gttagtggagtagttaagttggataaaatt 139  Q
    |||||| ||||||||||||||||| |||||    
T  5524425 gttagttgagtagttaagttggatgaaatt 5524396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 6494964 - 6495069
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||| ||||||||||| | ||||||||||||||  ||||||| |||||||||||||||||| ||||||||| ||||| |||||||||| ||||    
T  6494964 ttgattttgatggtaaaattagtgttatttactaaaacacttttattaattgtagttagtggagtagtaaagttggatgaaatttaataaataagggtat 6495063  T
Q  156 tataat 161  Q
     |||||    
T  6495064 aataat 6495069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 32346034 - 32346187
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  || |||||||||||| |||| ||  ||||| |||||||  || ||||||||| |||||| |||||||| || |||||||| |     
T  32346034 tagttgtttaaggtttgtgtacggttattaaggaaataattgattgtgttgatttcaatggtaaaattaatatcatctactaaaatactcttattaatta 32346133  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||| || |||||||||||||||| |||| |||||    
T  32346134 taattagtggagtagttaagttgaatgaaattcaataaataagggtataataat 32346187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 23670629 - 23670486
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |||||  ||||||||  ||| || |||||| |||||||  || ||||||||| || ||||||||||||||| ||||||||  ||||    
T  23670629 tcgtttaaggtttgtgcacaattattaagggaat-attaattgtgttgatttccatggtaaaattaatagcatttactaaaacactcttattaatggtag 23670531  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||    
T  23670530 ttagtggagtagttaagtttgatgaaatttaataaataagagtat 23670486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 32018930 - 32019040
Alignment:
Q  41 aaatgataaattgtattgattttga-tagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaatt 139  Q
    ||||||| |||||| |||||||||| ||||||||||  ||||||||||||||| || |||||||| ||| |||||||||||| ||||||||||| |||||    
T  32018930 aaatgattaattgtgttgattttgaatagtaaaatttctatcatttactaaaatactcttattaattgttgttagtggagtaattaagttggatgaaatt 32019029  T
Q  140 caataaataag 150  Q
     ||||||||||    
T  32019030 taataaataag 32019040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 33819356 - 33819214
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    |||||||||| ||| ||| |||||||| ||||||| |||||| |||||||  || |||||||||||| ||||||| ||| ||| |||||||| ||| |||    
T  33819356 gtttaaggttaatgtacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttacaaaatcactcttattaattgttgtt 33819257  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtat 155  Q
     |||||||||| |||||| || ||||||| |||||||| ||||    
T  33819256 tgtggagtagtgaagttgaatgaaattcattaaataagggtat 33819214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 25571498 - 25571413
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||    
T  25571498 agtatcatttactaaaatacccttattagttgtagttagtggaatagttaagttggatgaaattcaataaataagggtataataat 25571413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 30866110 - 30865973
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||||||  |||||| |||||||  ||||||| |||||| || ||||  || ||| ||||| ||||||||||||||| || |||||||| | || |    
T  30866110 cgtttaaggtttgtgcacgattattaaagaaatgattaattgtgttaatttcaatggtataattaatatcatttactaaaatactcttattaattataat 30866011  T
Q  112 tagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  30866010 tagtggagtagttaagttagatgaaattcaataaataa 30865973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 16904531 - 16904379
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  ||||   || ||||||||||||| |||||| |||||||  |||||||||||| ||||| || |||||| || | ||||    
T  16904531 aataatagtcgtttaaggtttgtgcaaaatttttaagaaaatgattaattgtgttgatttcaatagtaaaattattatcactttctaaaatactcgtatt 16904432  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || | ||||||||| | || ||||||||||| |||||||||||||||| ||||    
T  16904431 aattatagttagtgaaataattaagttggatcaaattcaataaataagggtat 16904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 29835399 - 29835536
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  ||| || |||||||| ||||||| |||| | |||||||  || |||||||||||| ||||||||||||||| |||||||| || ||    
T  29835399 tcgtttaaggtttgtgcgcgcttattaaggaaatgattaattatgttgatttaaatggtaaaattagtagcatttactaaaacactcttattaattgcag 29835498  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||  ||||||||| ||||||||  ||||||||||||||    
T  29835499 ttaacggagtagtt-agttggatgtaattcaataaataa 29835536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 46211583 - 46211472
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattag---tatcatttactaaaacaccctt 99  Q
    |||| ||||||||||||||| ||||||  |||||||| ||||||| |||||| ||||||||||| |||||| |||   ||||||||||||||||| ||||    
T  46211583 aataatagtcgtttaaggtttatgcacaattattaaggaaatgattaattgtgttgattttgatggtaaaactagtactatcatttactaaaacatcctt 46211484  T
Q  100 attaaatgtagt 111  Q
    ||||| ||||||    
T  46211483 attaattgtagt 46211472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 31930479 - 31930626
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| ||| ||||||| |||||||  |||||||  | ||| |||||||| || |||||| || | | ||||  ||||| ||||||||||| ||    
T  31930479 tagtcgtttaaagtttatgcacgattattaaagaaatgattgactgtgttgattttaatggtaaaactaatctaattttttaaaatacccttattaattg 31930578  T
Q  108 tagttagtggag--tagttaagttggataaaattcaataaataagagt 153  Q
    ||||||||||||  |||||||||| ||| |||||||||||||||||||    
T  31930579 tagttagtggagtatagttaagtttgatgaaattcaataaataagagt 31930626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 37245774 - 37245690
Alignment:
Q  71 aaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||| ||||||||||||||| |||||||| |||| | |||||||| |||||||||||| |||||||||||||||| ||||    
T  37245774 aaattagtagcatttactaaaacactcttattaattgtaataagtggagtggttaagttggatgaaattcaataaataagggtat 37245690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 19271715 - 19271862
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||| | |  |||||| ||||||| |||||||| |||||| |||||||  ||  | ||||||||  |||| ||||||| ||  ||||||| ||    
T  19271715 tagtcgtttaatgcttgtgcacgattattaaaaaaatgattaattgtgttgatttcaatgatcaaattagtggcattgactaaaatacttttattaattg 19271814  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||||||||| ||| | |||||||||| ||||    
T  19271815 tagttagtggagtagttaagttggatgaaaattaataaataagggtat 19271862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 49101786 - 49101657
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttacta---aaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    ||||||||||||| |||||| || ||||| |   |||||||| ||||||||||||   ||| || | |||||| |||||||||||||||||||||||||     
T  49101786 ttaagaaaatgattaattgtgtttattttaaggataaaattaatatcatttactattaaaatactcatattaattgtagttagtggagtagttaagttga 49101687  T
Q  132 ataaaattcaataaataagagtattataat 161  Q
    || ||||||||||||||| ||||| |||||    
T  49101686 atgaaattcaataaataaaagtataataat 49101657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 42796094 - 42796010
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagta---gttaagttggataaaattcaataaataag 150  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||||||||   |||||||||||| ||||||| ||||||||    
T  42796094 taaaattagtaacatttattaaaacacccttattaattgtagttagtggagtagttgttaagttggatgaaattcattaaataag 42796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 32018735 - 32018836
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||||| |||||||  |||||||||||  ||||||||||||||| || |||||||| ||| |||||| ||||| ||||||||||| ||||| ||||||||    
T  32018735 aattgtgttgatttcaatagtaaaatttctatcatttactaaaatactcttattaattgtcgttagtagagtaattaagttggattaaatttaataaata 32018834  T
Q  149 ag 150  Q
    ||    
T  32018835 ag 32018836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 44180357 - 44180268
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaa 92  Q
    |||| ||||||||||||||| || |||| |||||||||||||||| |||||| |||||||  || ||||||||||||| |||||||||||    
T  44180357 aataatagtcgtttaaggtttatacacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtataatttactaaaa 44180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 12631452 - 12631345
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||| |||||||||  |||||| |||||||| |||| || ||||||||||||||  |||||||||||||||  |||||  |||||| ||||||||| ||    
T  12631452 tagtcatttaaggtttgtgcacgattattaaggaaataattaattgtattgatttcaatagtaaaattagtagtatttatcaaaacatccttattaattg 12631353  T
Q  108 tagttagt 115  Q
    ||||||||    
T  12631352 tagttagt 12631345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 36790809 - 36790734
Alignment:
Q  86 actaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||||| |||||||||| ||||||||| || |||| |||||||||||||||| |||| |||||    
T  36790809 actaaaacacccttattaattgtagttagttgagtagttatgtcggatgaaattcaataaataagggtataataat 36790734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 21937830 - 21937887
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    |||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||||    
T  21937830 taaaattagtgtcatttactaaagcactcttattaattgtagttagtggagtagttaa 21937887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 30546413 - 30546484
Alignment:
Q  84 ttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||| |  | |||||||||||||||| ||||    
T  30546413 ttactaaaacacctttattaattgtagttattggagtagttaagtggagtgaaattcaataaataagggtat 30546484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 17828393 - 17828473
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||| |||||||||| |||  || ||||| || |||||||||||||||| |||||||||||  ||||||||||||||    
T  17828393 gtaaaattaatatcatttacaaaattactcttatcaattgtagttagtggagtaattaagttggat-gaattcaataaataa 17828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 47045539 - 47045600
Alignment:
Q  94 acccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||| |||| ||| ||||||| |||||||||||||||| |||||||| ||||||||||||    
T  47045539 acccttgttaattgtggttagtgtagtagttaagttggatgaaattcaacaaataagagtat 47045600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 37850769 - 37850852
Alignment:
Q  69 taaaattagtatcatttactaaaac-acccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataaga 151  Q
    |||||||||||| |||||||||||  | |||||| || |||||||| |||||| |||||||| ||| ||| |||||||||||||    
T  37850769 taaaattagtatgatttactaaaaagatccttataaactgtagttaatggagttgttaagttagatgaaaatcaataaataaga 37850852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 39308711 - 39308632
Alignment:
Q  30 ggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||| ||||||||||||| |  ||  |||||||| |||||||||||| ||| |||||||||||||||| ||||| |||||    
T  39308711 ggtttttaagaaaatgattagatgagttgattttaatagtaaaattaatattatttactaaaacacccctattacatgta 39308632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 7930181 - 7930083
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||||||||||||||||||| | | || |||||||  || | |||||  |  ||||||||||||||||||||||||| | ||||||||| | ||||||    
T  7930181 cacggttattaagaaaatgattagtagtgttgatttcaatggaaaaatatggttcatttactaaaacacccttattaattatagttagtgaaatagtta 7930083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 24167078 - 24166996
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||| | | ||||||||||| |||||||||||  |||||||||| ||||||||  ||| || |||||||| |||||||    
T  24167078 gtaaaattaatgttatttactaaaatacccttattaatagtagttagtgcagtagttacattgaatgaaattcaagaaataag 24166996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 29121631 - 29121533
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    |||||||| |||| ||||||| |||  | |||||||| || |||||||  || | ||||||||||||||||| ||||| | | ||||||||||||||||    
T  29121631 cacggttactaaggaaatgatcaatattgttgattttaatggtaaaatatgtctaatttactaaaacaccctcattaattattgttagtggagtagtta 29121533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 31665741 - 31665842
Alignment:
Q  51 ttgtattgattttgatagtaaaattagtat-catttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| |||||||| || ||||||||| | | |||||||||||| |   |||||||  ||||||||| |||||||||| || |||||| ||||||||||||    
T  31665741 ttgtgttgattttaatggtaaaattaattttcatttactaaaatatatttattaatagtagttagtagagtagttaaattagataaatttcaataaataa 31665840  T
Q  150 ga 151  Q
    ||    
T  31665841 ga 31665842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 35333100 - 35333051
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaat 147  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||| ||||    
T  35333100 ttattaattgtagttagtggagtagttaagttagatgaaattcaacaaat 35333051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 39005508 - 39005447
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagtt 129  Q
    ||||||||||||||||||||||||| ||| ||| ||| |||||||||| || || |||||||    
T  39005508 gtaaaattagtatcatttactaaaatacctttaataattgtagttagtagattaattaagtt 39005447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 39452443 - 39452390
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||||||| || ||||||||| ||||||||||||||| ||||||||||| ||||    
T  39452443 ttgattttaatggtaaaattaatatcatttactaaaatacccttattaattgta 39452390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 2850863 - 2850971
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||| ||||  |||| | |||||||| ||||||| |||| | |||||||  ||  |||||||| ||| ||||||||||| ||||| ||||| |     
T  2850863 tagtcgtttatggtttgtgcatgattattaaggaaatgattaattatgttgatttcaatgataaaattaatattatttactaaaataccctcattaatta 2850962  T
Q  108 tagttagtg 116  Q
    |||||||||    
T  2850963 tagttagtg 2850971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 36790898 - 36790854
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgat 47  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||    
T  36790898 aataatagtcgtttaaggtttatgcacggttattaaggaaatgat 36790854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 47045495 - 47045538
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||    
T  47045495 gtaaaattagtatcatttcctaaaatacccttattaattgtagt 47045538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 25571394 - 25571364
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  25571394 tgcattggtattctaaagtgacaattatttt 25571364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 124
Target Start/End: Complemental strand, 46602123 - 46602081
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    ||||||||||||||||||||| | ||||||||||| |||||||    
T  46602123 atttactaaaacacccttattcattgtagttagtgcagtagtt 46602081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 47045620 - 47045650
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  47045620 tgcattggtattctaaagtgacaattatttt 47045650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 37490536 - 37490466
Alignment:
Q  78 tatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagag 152  Q
    ||||||||||||||| || | |||||    |||||||||||||| |||| ||| || ||||||||||||||||||    
T  37490536 tatcatttactaaaatactcatatta----tagttagtggagtaattaaattgaatgaaattcaataaataagag 37490466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 13961936 - 13961904
Alignment:
Q  181 ctgcattggtattctaaagtgacaattatttta 213  Q
    |||||||||||||||||||||| ||||||||||    
T  13961936 ctgcattggtattctaaagtgataattatttta 13961904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 37490422 - 37490378
Alignment:
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagag 152  Q
    |||||||||||||| |||| ||| || ||||||||||||||||||    
T  37490422 tagttagtggagtaattaaattgaatgaaattcaataaataagag 37490378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 10097962 - 10098108
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||| ||||||||||||    
T  10097962 aataatagtcgtttaaggttgatgcatggttattaagaaaatgattaattgtattgattttgatggtaaaattaatatcatttactataacacccttatt 10098061  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || |||||||||||||||||||||||||||| || ||||||||||||    
T  10098062 aattgtagttagtggagtagttaagttggatgaagttcaataaataa 10098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 31231861 - 31231717
Alignment:
Q  17 aaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtg 116  Q
    ||||||||||||||||||||||| ||||||| |||||| | ||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||    
T  31231861 aaggttgatgcacggttattaaggaaatgatgaattgtgtcgattttgatggtaaaattaatatcatttactgaaacacccttattaattgtagttagtg 31231762  T
Q  117 gagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  31231761 gagtagttaagttggataaagttcaataaataagggtattataat 31231717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 34393925 - 34394087
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  34393925 aataatagtcgtttaaagttgatgcacggttattaaggaaatgattaattgtgttgattttgatggtaaaattagtataatttactaaaacacctttatt 34394024  T
Q  103 aaatgtagt----tagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || | ||||    ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  34394025 aattatagttaactagtggagtagttaagttggataaagttcaataaataagagtattgtaat 34394087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 213
Target Start/End: Original strand, 10179923 - 10180127
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||||||||||  | ||||||||||||  || ||||||||||||| ||||||||||| || |||||||| ||    
T  10179923 tagtcgtttaaggtttgtgcacgattattaagaaaatgagtagttgtattgatttcaatggtaaaattagtataatttactaaaatacacttattaattg 10180022  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaatt 207  Q
    ||||||||||||||||||||||| || ||||||||| |||||| |||| |||||| |         |||||   ||||||||||||||||||||||||||    
T  10180023 tagttagtggagtagttaagttgaatgaaattcaattaataagtgtataataata-gaaaataataataaatgttgcattggtattctaaagtgacaatt 10180121  T
Q  208 atttta 213  Q
    ||||||    
T  10180122 atttta 10180127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 212
Target Start/End: Original strand, 9300094 - 9300294
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    |||||||||| ||||||| ||||||||||||||||   |||| |||||||| || ||||||||| || |||||||||||||||||||||||| | |||||    
T  9300094 gtttaaggtttatgcacgattattaagaaaatgattgtttgtgttgattttaatggtaaaattaatagcatttactaaaacacccttattaattttagtt 9300193  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnnt-ataaagactgcattggtattctaaagtgacaattattt 211  Q
    |||||||||||||||||| || ||||||||||||||||  ||| ||| | ||        | ||||| |||||||||||||| |||||||||||||||||    
T  9300194 agtggagtagttaagttgaatgaaattcaataaataaggatataatagtggggaaagaaataataaatactgcattggtattgtaaagtgacaattattt 9300293  T
Q  212 t 212  Q
    |    
T  9300294 t 9300294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 31271161 - 31271014
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  || ||| ||||||||||||||||  ||||| |||||||| || ||||||||| |||||| |||||||| || |||||||| |     
T  31271161 tagtcgtttaaggtttgtgtacgattattaagaaaatgattgattgtgttgattttaatggtaaaattaatatcatatactaaaatactcttattaatta 31271062  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31271061 tagttagtggagtagttaagttggataaaattcaataaataagggtat 31271014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 22771814 - 22771964
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| |||||| ||||||||| || |||| |||||  ||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||    
T  22771814 tcgtttaaggtttatgcacagttattaaggaattgattaattgggttgattttgatggtaaaattagtgtcatttattaaaacacccttattaattgtag 22771913  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||| |||| ||| ||||||| |||||||||||||||| |||| |||||    
T  22771914 ttagtgaagtaattatgttggatgaaattcaataaataagggtataataat 22771964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 39482760 - 39482549
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  |||||| |||||||||||||||| |||||| |||||||  |  ||||||||||||  |||||||||||||||||||||    
T  39482760 aatattagtcgtttaagatttgtgcacgattattaagaaaatgattaattgtgttgatttcaagggtaaaattagtagaatttactaaaacacccttatt 39482661  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataata--ggnnnnnnnntataaagactgcattggtattctaaagt 200  Q
    || | ||||||||||| ||||||||| | || |||||||||||||||| |||| ||||||  ||         ||||| |||||||||||||| ||||||    
T  39482660 aattatagttagtggactagttaagtggaatgaaattcaataaataagggtataataatagtgggaaaaaataataaatactgcattggtattgtaaagt 39482561  T
Q  201 gacaattatttt 212  Q
    ||||||||||||    
T  39482560 gacaattatttt 39482549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 159
Target Start/End: Original strand, 2767262 - 2767424
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||| |||||||||||||||||||||| |||| || |||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  2767262 aatagtagttgtttgaggttgatgcacggttattaaggaaataattaattgtgttgattttgatggtaaaattagtatcatttattaaaacatccttatt 2767361  T
Q  103 aaatgtagttagtg------gagtagttaagttggataaaattcaataaataagagtattata 159  Q
    |  |||||||||||      ||||||||||||||||| || ||||||||||||| ||||||||    
T  2767362 atttgtagttagtggaggatgagtagttaagttggattaagttcaataaataagggtattata 2767424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 40996344 - 40996483
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||||||  || ||||| ||||||| |||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||| |||||    
T  40996344 tcgtttaaggtttatgcacaattgttaaggaaatgattaattgtgttgattttgaatgtaaaattagtttcatttactaaaacacccttattaattgtag 40996443  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||| | | |||||||||||| ||||||||||||||||    
T  40996444 ttagtgaaatggttaagttggatgaaattcaataaataag 40996483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 13335353 - 13335203
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||| ||||||| |||||||| ||||| | |||||| ||||||||||| ||||||||||||||||||| ||||||||  ||||||| || ||    
T  13335353 tcgtttaaggtttatgcacgattattaaggaaatggttaattgtgttgattttgatggtaaaattagtatcatttagtaaaacacatttattaattgcag 13335254  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||| ||||||||||||| ||| ||||||||||||| || |||| |||||    
T  13335253 ttagtagagtagttaagtttgatgaaattcaataaatcagggtataataat 13335203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 45425635 - 45425789
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| |||||||||||| || ||||| | |||||||||||||||| |||||| |||||||| || ||||||||| || |||||| |||||||  ||||    
T  45425635 ataatattagtcgtttaagttttatgcatgattattaagaaaatgattaattgtgttgattttaatggtaaaattaataacatttattaaaacattctta 45425734  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||| |||||||||||||||| |||||||| || |||||||||||||||| ||||    
T  45425735 ttaattgtagttagtggagtaattaagttgtatgaaattcaataaataagggtat 45425789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 21216078 - 21216215
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    ||||||||||||||  |||| | |||||||| ||||||| |||||| |||||||  || |||||||||||  |||||||||||||| ||||||||| |||    
T  21216078 agtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagttgcatttactaaaacatccttattaattgt 21216177  T
Q  109 agttagtggagtagttaagttggataaaattcaataaa 146  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  21216178 agttagtggagtagttaagttggatgaaattcaataaa 21216215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 17719229 - 17719436
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  |||||| ||||||| |||||||| ||||||| ||||||| || ||||| ||||||| ||||||||||| | |||||||    
T  17719229 aataatagtcgtttaagatttgtgcacgattattaaaaaaatgattaattgtaatgattttaatggtaaagttagtattatttactaaaatatccttatt 17719328  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || | |||||||||||||||||||||||||| ||||| |||||||||  |||| ||||| ||         |||||   |||||||||||||||||||||    
T  17719329 aattatagttagtggagtagttaagttggatgaaatttaataaataaaggtataataat-ggaaaaagataataaatgttgcattggtattctaaagtga 17719427  T
Q  203 caattattt 211  Q
    |||||||||    
T  17719428 caattattt 17719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 42887104 - 42886993
Alignment:
Q  44 tgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaat 143  Q
    |||| |||||| |||||||  |||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  42887104 tgattaattgtgttgatttcaatagcaaaattagtatcatttactaaaatacctttattaattgtagttagtggcgtagttaagttggataaaattcaat 42887005  T
Q  144 aaataagagtat 155  Q
    ||||||||||||    
T  42887004 aaataagagtat 42886993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 5053156 - 5053282
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||  |||||||| ||||||||| ||||||||||| ||||||     
T  5053156 ttaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacagtcttattaattgtagttagcggagtagttaaattggatg 5053255  T
Q  135 aaattcaataaataagagtattataat 161  Q
    | ||||||||||||||||||| |||||    
T  5053256 agattcaataaataagagtataataat 5053282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 34948687 - 34948805
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||| ||||||| |||||| |||||||  |||||||||||||||||||||||  ||||||  ||||||| ||||||||||||||||||||||||||    
T  34948687 ttattaaggaaatgattaattgtgttgatttaaatagtaaaattagtatcatttacagaaacacatttattaattgtagttagtggagtagttaagttgg 34948786  T
Q  132 ataaaattcaataaataag 150  Q
    || ||||||||||||||||    
T  34948787 atgaaattcaataaataag 34948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 41 - 147
Target Start/End: Original strand, 44761503 - 44761609
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  44761503 aaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtagttagtggagtagttaagttggatgaaattc 44761602  T
Q  141 aataaat 147  Q
    |||||||    
T  44761603 aataaat 44761609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 26626088 - 26626241
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||| ||||||| |||||||| ||||||| |||||| |||| |||||| |||||||| |||| ||||| ||||| | ||||||||| ||    
T  26626088 tagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttattaaaatatccttattaattg 26626187  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||   |||| || |||||||||||||||| |||| |||||    
T  26626188 tagttagtggagtagtccggttgaatgaaattcaataaataagggtataataat 26626241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 32476426 - 32476280
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    ||||||||||||||  |||||||||||||||||||||||  ||| | |||||||  ||  |||||||| ||||||||| ||||| ||||||||||| |||    
T  32476426 agtcgtttaaggtttgtgcacggttattaagaaaatgattgattctgttgatttcaatgataaaattaatatcatttattaaaatacccttattaattgt 32476327  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| || |||||||||||| ||| |||||||||||||||| ||||    
T  32476326 agttaatgaagtagttaagtttgatgaaattcaataaataagggtat 32476280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 31082764 - 31082618
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| ||||| ||||  |||||| | |||||| ||||||| |||||| |||||||| ||  ||||||||||   |||||||||||||||||||||    
T  31082764 aatattagttgtttatggtttgtgcacgataattaaggaaatgattaattgtcttgattttaatgataaaattagtggtatttactaaaacacccttatt 31082665  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || | |||||||||||||||||||||||||| ||||| |||||||||    
T  31082664 aattatagttagtggagtagttaagttggatgaaatttaataaataa 31082618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 1875568 - 1875685
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| ||    
T  1875568 tagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattg 1875667  T
Q  108 tagttagtggagtagtta 125  Q
    ||||||||| | ||||||    
T  1875668 tagttagtgaaatagtta 1875685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 11976905 - 11977053
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| |||||||||||||||  |||| | |||||| | |||| || |||||| |||||||  || ||| ||| |||| |||||||||||| |||||||    
T  11976905 ataatattagtcgtttaaggtttgtgcatgattattatggaaatcattaattgtgttgatttcaatggtataatcagtagcatttactaaaataccctta 11977004  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| |||||||||| ||||||||||||| ||| |||||||||||||||    
T  11977005 ttaattgtagttagtagagtagttaagttagatgaaattcaataaataa 11977053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 32678475 - 32678389
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataata 162  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||| ||||||    
T  32678475 agtatcatttactaaaacatccttattaattgtagttagtggagtagttaagttggatgaaattaaataaataagaatataataata 32678389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 42972490 - 42972630
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||  |||||| |||||||||||||||| |||||| |||||||  || ||||||||| |||| |||||||||| ||||||||||| | ||||||    
T  42972490 tttaaggtttgtgcacgattattaagaaaatgattaattgttttgatttcaatggtaaaattaatatcgtttactaaaatacccttattaattatagtta 42972589  T
Q  114 gtgga---gtagttaagttggataaaattcaataaataaga 151  Q
    |||||   |||||||||||| || |||||||||||| ||||    
T  42972590 gtggagacgtagttaagttgaatgaaattcaataaacaaga 42972630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 36967506 - 36967413
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacc 96  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||| |||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  36967506 aataatagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaattaatatcatttactaaaacacc 36967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 51257 - 51132
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| ||||||||||  |||||| |||||||||||||||| |||||| |||||||| || ||||||| |||||||||||| |||||||  |||||    
T  51257 aataatagttgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgattttaat-gtaaaataagtatcatttacaaaaacacatttatt 51159  T
Q  103 aaatgtagttagtggagtagttaagtt 129  Q
    || ||||||||||||| || |||||||    
T  51158 aattgtagttagtggattaattaagtt 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 4428354 - 4428474
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| | |||| |||||||| ||  |||||||| ||||||||||||||| ||  ||||||| ||||||||||| | |||||||||| |||     
T  4428354 ttaagaaaatgattatttgtgttgattttaatgataaaattattatcatttactaaaatacaattattaattgtagttagtgaattagttaagttagatg 4428453  T
Q  135 aaattcaataaataagagtat 155  Q
    ||||||||||||||| |||||    
T  4428454 aaattcaataaataaaagtat 4428474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 39405907 - 39405755
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| ||||||| |||||| || ||||  ||  ||||||||||||||||||||| || | | |||||    
T  39405907 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctttatt 39405808  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |  ||||||||||||| |||||||| || ||||| |||||||||| ||||    
T  39405807 aattacagttagtggagtaattaagttgaatgaaattaaataaataagggtat 39405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 213
Target Start/End: Original strand, 396610 - 396791
Alignment:
Q  31 gttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 130  Q
    ||||||||| ||||||| |||| | |||||||  |  |||||||||||||||||||||| || | ||||||||| |||||||| || ||||||||  |||    
T  396610 gttattaaggaaatgattaattatgttgatttcaacggtaaaattagtatcatttactacaatatccttattaattgtagttaatgaagtagttatattg 396709  T
Q  131 gataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttta 213  Q
    ||||||||||||| |||||| |||| ||||| |          |||||   ||||||||||||||||||||||||||||||||    
T  396710 gataaaattcaattaataagggtataataat-gaaaaataataataaatgttgcattggtattctaaagtgacaattatttta 396791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 155
Target Start/End: Complemental strand, 7173030 - 7172907
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||  ||||||| |||||| |||||||  ||  ||||||||||| ||||||||||||||   ||||||| |||||||| || |||||||||||||     
T  7173030 ttattaaagaaatgattaattgtgttgatttcaatgataaaattagtagcatttactaaaacatatttattaattgtagttaatgaagtagttaagttga 7172931  T
Q  132 ataaaattcaataaataagagtat 155  Q
    || |||||||||||||||| ||||    
T  7172930 atgaaattcaataaataagggtat 7172907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 17824000 - 17823914
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||||| ||||||| || ||| ||||||| ||||||||||| |||||||||||||||| ||||| ||||||||| |||||    
T  17824000 taaaattagtatcttttactagaatacctttattaattgtagttagtgaagtagttaagttggatgaaattaaataaataatagtat 17823914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 14854916 - 14855048
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||  | |||| |||| ||||||||||   ||||| |||||||| || ||||||||| |  ||||| |||||||||| ||||||| ||||||||    
T  14854916 tttaaggtttgtacacgattatcaagaaaatgaatcattgtgttgattttaatggtaaaattaattgcatttgctaaaacacctttattaattgtagtta 14855015  T
Q  114 gtggagtagttaagttggataaaattcaataaa 146  Q
    |||||||||||| | || || ||||||||||||    
T  14855016 gtggagtagttaggctgaatgaaattcaataaa 14855048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 150
Target Start/End: Original strand, 29226578 - 29226646
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  29226578 atttattaaaacactcttattaattgtagttagtggagtagttaagttagatgaaattcaataaataag 29226646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 35732192 - 35732105
Alignment:
Q  77 gtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataatagg 164  Q
    |||||||||||||||| || | |||||| |||| ||||||||||||| ||||| ||| |||||||||| |||||||||| ||||||||    
T  35732192 gtatcatttactaaaatactcctattaattgtaattagtggagtagtaaagttagatgaaattcaatatataagagtataataatagg 35732105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 27294096 - 27294176
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||| |||||||||| |   ||||||| || ||||||||||||| ||||||||||| |||||||||||||||    
T  27294096 taaaattagtatcttttactaaaatatatttattaattgcagttagtggagtaattaagttggatgaaattcaataaataa 27294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 10953787 - 10953864
Alignment:
Q  81 catttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||||||| |||   |||||||||||||||||| ||| |||||||||| ||||| |||| |||||    
T  10953787 catttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataat 10953864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 10961792 - 10961869
Alignment:
Q  81 catttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||||||| |||   |||||||||||||||||| ||| |||||||||| ||||| |||| |||||    
T  10961792 catttactaaaacacccttattaattgt---tagtggagtagttaagttagatcaaattcaatatataagggtataataat 10961869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 31331521 - 31331423
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggat 133  Q
    ||||| ||||||| ||||||||||||||  ||  |||||||| ||| ||||||||||| | | ||||||| ||||||||||| |||| |||||||||||    
T  31331521 ttaaggaaatgattaattgtattgatttcaattataaaattattattatttactaaaatatcattattaattgtagttagtgaagtaattaagttggat 31331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 39466074 - 39466156
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt-aagttggataaaattcaataaataag 150  Q
    |||||||||||||||||||||||| | | |||||||  || ||||||| ||||||| || |||||||||||||||||||||||    
T  39466074 taaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataag 39466156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 152
Target Start/End: Original strand, 36006906 - 36007007
Alignment:
Q  51 ttgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||| |||||||| ||  |||||||| ||| ||| ||||||| | || |||||| |||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  36006906 ttgtgttgattttaatgataaaattaatattattgactaaaatatccctattaattgtagttagtggggtaattaagtttgatgaaattcaataaataag 36007005  T
Q  151 ag 152  Q
    ||    
T  36007006 ag 36007007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 4924094 - 4924190
Alignment:
Q  59 attttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| || ||||||||||||| ||||||||||| | | ||||||| |||||||| | |||||||||||||| || ||| | |||||||||| ||||    
T  4924094 attttaatggtaaaattagtattatttactaaaatatctttattaattgtagttaatagagtagttaagttgaatgaaacttaataaataagggtat 4924190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39300910 - 39301018
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| |||||||||||| ||  || ||| |||||||  ||||||| |||| | ||||||| ||| ||||||||| ||||||||||||||| ||||| |    
T  39300910 ataatagtagtcgtttaagatttgtgtacgattattaaagaaatgattaattatgttgatttcgatggtaaaattaatatcatttactaaaaaaccctaa 39301009  T
Q  101 ttaaatgta 109  Q
    |||| ||||    
T  39301010 ttaattgta 39301018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 39301018 - 39301085
Alignment:
Q  94 acccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||| ||||||||||| ||||||| ||||| || ||||||||||||||| ||||| |||||    
T  39301018 acccttattaattgtagttagtgaagtagttcagttgaatgaaattcaataaataaaagtataataat 39301085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 43719211 - 43719353
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattag-tatcatttactaaaacacccttattaaat 106  Q
    ||||||||||| | | ||||| |||| ||||  |||| || |||| |||||||||| ||  ||||||||| | ||||||| ||||| | | ||||||| |    
T  43719211 tagtcgtttaaagattatgcatggtttttaaataaattattaattatattgattttaattataaaattaggtgtcatttattaaaataacattattaatt 43719310  T
Q  107 gtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
     |||||||| || || ||||||||||| |||||||||||||||    
T  43719311 atagttagttgaataattaagttggatgaaattcaataaataa 43719353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 11649729 - 11649652
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa 104  Q
    |||||||||||| ||||| || ||| |  |||||||| ||| ||||||  ||||||||||||||||||||||||||||    
T  11649729 cacggttattaaaaaaataattaatagggttgattttaataataaaatgtgtatcatttactaaaacacccttattaa 11649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 7703132 - 7703228
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa 104  Q
    ||||||||||| |||  || | | |||||||| |||| || |||||| |||||||  || ||||||||| ||||||||||||||| |||||||||||    
T  7703132 tagtcgtttaaagtttgtgtaagattattaaggaaataattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaa 7703228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 32678863 - 32678787
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta 79  Q
    |||| ||||||||||| ||| || |||| |||||||| ||||||| |||||| ||||||||||| |||||| |||||    
T  32678863 aataatagtcgtttaaagtttatacacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagta 32678787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 40109857 - 40109789
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaac 93  Q
    ||||||||| ||||  ||||||| ||||| ||||||||  |||||||||||||||| ||||||||||||    
T  40109857 tgcacggtttttaaagaaatgattaattgaattgatttcaatagtaaaattagtataatttactaaaac 40109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 29226231 - 29226278
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagta 79  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||||    
T  29226231 ttattaagaaaatgattaattgtgttgattttgatggtaaaattagta 29226278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 151
Target Start/End: Complemental strand, 5356706 - 5356597
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| | |||| |||||||| ||  |||||||| |||||||||||||   ||  ||||||| |||||||| |||| || ||||||||||| ||||||    
T  5356706 aaatgattagttgtgttgattttaatgataaaattaatatcatttactaatgtact-ttattaattgtagttaatggaataattaagttggatgaaattc 5356608  T
Q  141 aataaataaga 151  Q
    |||||| ||||    
T  5356607 aataaaaaaga 5356597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 34057642 - 34057731
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataa 145  Q
    |||||||  ||| ||||| |||||| ||||||||||| | | || |||  ||||||||||| | |||||||||||||| |||||||||||    
T  34057642 ttgatttcaataataaaactagtattatttactaaaatatcgttgttatttgtagttagtgaaatagttaagttggatgaaattcaataa 34057731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 35504937 - 35504994
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||| |||||||| | || ||||||| || |||||||||||||||||||||||||    
T  35504937 ttattaattgtagttaatagaatagttaaattcgataaaattcaataaataagagtat 35504994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 44648568 - 44648621
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagta 121  Q
    |||||||||||||||||||||||||||  |||| ||| |||| |||||||||||    
T  44648568 gtaaaattagtatcatttactaaaacatacttactaattgtaattagtggagta 44648621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 27870937 - 27870857
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagtta-agttggataaaattcaataaataagagtat 155  Q
    ||||||||||| ||||||| ||||||||| |||||||||| || |||||| || ||| | |||| ||||||||||| ||||    
T  27870937 agtatcatttagtaaaacaaccttattaattgtagttagtagaatagttatagatggttgaaatgcaataaataagggtat 27870857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 32476256 - 32476225
Alignment:
Q  181 ctgcattggtattctaaagtgacaattatttt 212  Q
    ||||||||||||||||||||||||||||||||    
T  32476256 ctgcattggtattctaaagtgacaattatttt 32476225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 33765794 - 33765663
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||  |||||  || ||||| ||||||| |||| | |||||||| ||| |||||||| ||||||||||||| | ||  ||||||| |||||||     
T  33765794 tttaaggtttgtgcacaatttttaaggaaatgattaattatgttgattttaatactaaaattactatcatttactaatatacttttattaattgtagttg 33765695  T
Q  114 gtggagtagttaagttggataaaattcaataa 145  Q
    ||| |  || ||| |||| | |||||||||||    
T  33765694 gtgaatcagataaattgggtgaaattcaataa 33765663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 13335184 - 13335154
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  13335184 tgcattggtattctaaagtgacaattatttt 13335154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 22771984 - 22772014
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  22771984 tgcattggtattctaaagtgacaattatttt 22772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 29806329 - 29806375
Alignment:
Q  80 tcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    ||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  29806329 tcatttactaaaacacttttattaactgtagttagtggaatagttaa 29806375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Original strand, 40996510 - 40996540
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  40996510 tgcattggtattctaaagtgacaattatttt 40996540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 3117066 - 3117111
Alignment:
Q  80 tcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||    
T  3117066 tcatttactaaaacacccttgttaattatagttaatggagtagtta 3117111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 6796395 - 6796461
Alignment:
Q  98 ttattaaatgtagttagtggagtag----ttaagttggataaaattcaataaataagagtattataa 160  Q
    ||||||| |||||||||||||||||    |||||||| |||||||||| |||||||| |||| ||||    
T  6796395 ttattaattgtagttagtggagtagttaattaagttgaataaaattcattaaataagggtataataa 6796461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 8741148 - 8741079
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacc 96  Q
    ||||||||||||||||||||| | | ||  | |||||||| |||||||  || |||||||||||||||||    
T  8741148 cacggttattaagaaaatgattagtggtgctaattttgatggtaaaatgtgtttcatttactaaaacacc 8741079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 25284991 - 25285028
Alignment:
Q  78 tatcatttactaaaacacccttattaaatgtagttagt 115  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  25284991 tatcatatactaaaacacccttattaattgtagttagt 25285028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 50784 - 50752
Alignment:
Q  181 ctgcattggtattctaaagtgacaattatttta 213  Q
    |||||||| ||||||||||||||||||||||||    
T  50784 ctgcattgatattctaaagtgacaattatttta 50752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 9e-54; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 40900063 - 40899905
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| ||||||||| |||||||||||||||| ||||||| |||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  40900063 aataatagtcatttaaggtttatgcacggttattaaggaaatgattaattgtgttgattttgatggcaaaattagtatcatttactaaaacacccttatt 40899964  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  40899963 aattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataat 40899905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 21060775 - 21060629
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| |||||||||||||| | ||||||| |||||| || |||||||| ||||||||||||| ||||||||||| || ||||||    
T  21060775 aataatagtcgtttaaggtttatgcacggttattagggaaatgattaattgtgtttattttgatggtaaaattagtattatttactaaaatactcttatt 21060676  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||||||||||||||||||||||||||||||||||||    
T  21060675 aattgtagttagtggagtagttaagttggataaaattcaataaataa 21060629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 6753632 - 6753784
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||| ||||||| |||||||||||||||| |||| |||| ||||  || ||||||||||||||||||||||||| ||||||||||| ||    
T  6753632 tagtcgtttaaggtttatgcacgattattaagaaaatgattaatt-tattaatttcaatggtaaaattagtatcatttactaaaatacccttattaattg 6753730  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||||||||| ||||| |||||||||| |||| |||||    
T  6753731 tagttagtggagtagttaagttggatgaaatttaataaataagggtataataat 6753784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 212
Target Start/End: Original strand, 40530199 - 40530401
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    ||||||||||||   |||||| |||||||||||||||| |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| ||||    
T  40530199 gtcgtttaaggtctgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgta 40530298  T
Q  110 gttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattat 209  Q
    ||||||||||| |||||||||||| ||||| |||||||||| |||| ||| | ||         |||||  ||||||||||||| |||||||||||||||    
T  40530299 gttagtggagtggttaagttggatgaaattaaataaataagggtataatagtgggaaataaataataaatgctgcattggtattgtaaagtgacaattat 40530398  T
Q  210 ttt 212  Q
    |||    
T  40530399 ttt 40530401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 27542933 - 27542782
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||||||||||||  |||||| |||||||| |||||||  ||||| |||||||  || ||||||||| || |||||||||||| || |||||||| ||||    
T  27542933 gtcgtttaaggtttgtgcacgattattaaggaaatgattgattgtgttgatttcaatggtaaaattaataccatttactaaaatactcttattaattgta 27542834  T
Q  110 gttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27542833 gttagtggagtagttaagttggataaaattcaataaataagagtataataat 27542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 19930070 - 19929883
Alignment:
Q  24 atgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagt 123  Q
    ||||||| |||||||||||||||| |||| | ||||||||||| |||||| |||  ||||||||||||||| ||||||||| ||||||||||| | ||||    
T  19930070 atgcacgattattaagaaaatgattaattttgttgattttgatggtaaaactagcgtcatttactaaaacatccttattaattgtagttagtgaaatagt 19929971  T
Q  124 taagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||| |||||||||||||||| |||| ||||| ||         |||||   |||||||||||||||||||||||||||||||    
T  19929970 taagttggatgaaattcaataaataagggtataataat-ggaaaataataataaatgttgcattggtattctaaagtgacaattatttt 19929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 2588036 - 2588189
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||| ||||||||||       ||||||||||||||||||    
T  2588036 aataatagtcgtttaaggttgatgcacagttattaaggaaatgattaattgtgttgattttgatggtaaaattag-------tactaaaacacccttatt 2588128  T
Q  103 aaatgtagtta--gtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || ||||||||  ||| ||||||||| ||||||||| ||||||||||||| ||||||||||    
T  2588129 aattgtagttagtgtgcagtagttaaattggataaagttcaataaataagggtattataat 2588189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 7827902 - 7828041
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  | |||| ||||||||||||| || |||||| |||||||  || ||||||||||||||||||| ||||| ||||||||||| |||||    
T  7827902 tcgtttaaggtttgtacacgattattaagaaaataattaattgtgttgatttcaatggtaaaattagtatcatttattaaaatacccttattaattgtag 7828001  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataag 150  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  7828002 ttagtggagtagttaagttggatgaaatttaataaataag 7828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 212
Target Start/End: Complemental strand, 4818689 - 4818487
Alignment:
Q  10 gtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    |||||||||||||  |||||| |||||||| |||| || |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| ||||    
T  4818689 gtcgtttaaggtttgtgcacgattattaaggaaataattaattgtgttgatttcaattgtaaaattagtagcatttactaaaacacccttattaattgta 4818590  T
Q  110 gttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattat 209  Q
    |||||||||||  ||||||| ||| |||||||||||||||| |||| ||| | ||         |||||  || |||||||||| |||||||||||||||    
T  4818589 gttagtggagtgattaagttagatgaaattcaataaataagggtataatagtgggaaaaaaataataaatgctacattggtattataaagtgacaattat 4818490  T
Q  210 ttt 212  Q
    |||    
T  4818489 ttt 4818487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 1248577 - 1248730
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||| ||  ||||||||||||||| |||| || |||| | |||||||  || ||||||||| ||||||||||||||| ||||||||||| ||    
T  1248577 tagtcgtttaagatttgtgcacggttattaaggaaattattaattatgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattg 1248676  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||| ||||||||||||| |||||||||||| |||||| |||| |||||    
T  1248677 tagttagtgaagtagttaagttgaataaaattcaattaataagggtataataat 1248730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 161
Target Start/End: Original strand, 8724987 - 8725135
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  |||||| |||||||  ||||||| |||||| |||||||  || ||||||||| |||||||||||||||||| |||||||| |||||||    
T  8724987 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacacttattaattgtagtt 8725086  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||| ||| || ||||||||||||||| ||||| |||||    
T  8725087 agtggagtagttaacttgaatgaaattcaataaataatagtataataat 8725135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 6754160 - 6754022
Alignment:
Q  16 taaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagt 115  Q
    ||||||| ||||||  ||| |||||||||||| |||| | |||||||  |||||||||||| | |||||||||||||||| |||||||| ||||||||||    
T  6754160 taaggtttatgcactattaataagaaaatgattaatt-tgttgatttcaatagtaaaattaatgtcatttactaaaacactcttattaattgtagttagt 6754062  T
Q  116 ggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  6754061 ggagtagttaagttggatgaaattcaataaataagggtat 6754022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 8698444 - 8698302
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  |||||| |||||||  ||||||| |||||| |||||||  || |||||||||||  ||||||| |||||||||||||||| |||||||    
T  8698444 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattagttgcatttaccaaaacacccttattaattgtagtt 8698345  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||| |||||||||||| |||||||||||||||| ||||    
T  8698344 agtggagtggttaagttggatgaaattcaataaataagggtat 8698302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 29374487 - 29374335
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||  | |||||||||||||||||| |||| | |||||||  ||  |||||||| || |||||||||||| ||| |||||    
T  29374487 aatattagtcgtttaaggtttatttaaggttattaagaaaatgattaattatgttgatttcaatgataaaattaatagcatttactaaaagacctttatt 29374388  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || ||||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  29374387 aattgtagttagtggagtagttaaattgaataaaattcaataaataagggtat 29374335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 41062131 - 41062286
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||||||||||||||| ||   ||||||| || |||| | |||||||||||  ||||||||||||||||||||||||||||||||||    
T  41062131 aataatagtcttttaaggttgatgcacggata---agaaaataattaattatgttgattttgatgataaaattagtatcatttactaaaacacccttatt 41062227  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||||| || || ||||| |||||  | ||||||||||||| ||||||||||    
T  41062228 aattgtagttagtagaataattaagctggatggagttcaataaataagggtattataat 41062286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 2232043 - 2232189
Alignment:
Q  5 tactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa 104  Q
    ||||||||||||||||||  |||||| |||||||||||||||  |||||| |||||||  || |||||||||||| |||||| ||||| || ||||||||    
T  2232043 tactagtcgtttaaggtttgtgcacgattattaagaaaatgaataattgtgttgatttcaatggtaaaattagtagcatttattaaaaaactcttattaa 2232142  T
Q  105 atgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
     |    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  2232143 tt----ttagtggagtagttaagttggatgaaattcaataaataagggtat 2232189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 6315774 - 6315953
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||| |||||||  ||||| || ||||  ||  |||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  6315774 ttattaaggaaatgattgattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttattaattgtagttagtgaagtagttaagttgg 6315873  T
Q  132 ataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    || |||||||||||||||| |||| ||||| ||         |||||   |||||||||||||||||||||||||||||||    
T  6315874 atgaaattcaataaataagggtataataat-ggaaaataataataaatgttgcattggtattctaaagtgacaattatttt 6315953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 29570537 - 29570385
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  |||||| |||||||  ||||||| |||||| |||||||| ||  |||||||| ||  |||| |||||||||| |||||    
T  29570537 aatattagtcgtttaagatttgtgcacgattattaaagaaatgattaattgtgttgattttaatgttaaaattattagtatttgctaaaacacctttatt 29570438  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||| |||| |||||||||||||| |||||||||||||||||||||    
T  29570437 aattgtagttaatggaatagttaagttggatgaaattcaataaataagagtat 29570385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 9515891 - 9515729
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| ||||||||| |||||| |||||| |||||||  || ||||||||||||||||||||||||||| |||||||    
T  9515891 aatattagtcgtttaaggtttgtgcacgattattaagataatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaacatccttatt 9515792  T
Q  103 aa---------at-gtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||         || |||||||||||||||||||||||| || ||||||| |||||||||||||    
T  9515791 aatagtaggtcatagtagttagtggagtagttaagttgaatgaaattcattaaataagagtat 9515729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 155
Target Start/End: Original strand, 42803598 - 42803740
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    |||||||||| ||||||| |||| ||  |||| || |||||| || ||||  || ||||||||||||  ||||||||||||||| ||||||| |||||||    
T  42803598 gtttaaggtttatgcacgattatcaaagaaataattaattgtgttcatttcaattgtaaaattagtagtatttactaaaacaccattattaattgtagtt 42803697  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    | |||||| |||||||||||| |||||||||||||||||||||    
T  42803698 aatggagtggttaagttggatgaaattcaataaataagagtat 42803740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 3348091 - 3348306
Alignment:
Q  3 aatactagtcgtttaaggttgatg--cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatc-----atttactaaaacac 95  Q
    |||| ||||||||||||  |||||  ||||||||||||| |||| || |||| | ||||||||||| |||||||||||| |     ||||| ||||||||    
T  3348091 aataatagtcgtttaagtctgatgggcacggttattaaggaaattattaattatgttgattttgatggtaaaattagtaccccattatttattaaaacac 3348190  T
Q  96 ccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattct 195  Q
    ||||||||||||||||| ||| |||| ||||||||||| || |||||||||||||  ||||||||| ||         |||||  |||||||||||||||    
T  3348191 ccttattaaatgtagttggtgaagtaattaagttggatgaagttcaataaataaggatattataat-ggaaaaaaataataaatgctgcattggtattct 3348289  T
Q  196 aaagtgacaattatttt 212  Q
    ||| |||||||||||||    
T  3348290 aaaatgacaattatttt 3348306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 15818453 - 15818596
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcat--ttactaaaacacccttattaaa 105  Q
    ||||||||||||||| ||||||| |||||||| ||||| | |||||| |||||||  || |||||||||||| |||  ||||||||||||| |||||||     
T  15818453 tagtcgtttaaggtttatgcacgattattaaggaaatgtttaattgtgttgatttcaatggtaaaattagtagcatatttactaaaacacctttattaat 15818552  T
Q  106 tgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||| | |||||||||||||| |||||| ||||| |||||||||    
T  15818553 tgtaatcagtggagtagttaaattggatgaaatttaataaataa 15818596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 30512658 - 30512801
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa-at 106  Q
    ||||||| ||| ||| ||||||| |||||||| ||||||| ||||||||||||||  || |||||||||  |||||||||||| | || |||||||| ||    
T  30512658 tagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacat 30512757  T
Q  107 gtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||| | |||||||||||||| ||||| ||||||||||    
T  30512758 gtagttagtgaaatagttaagttggatgaaatttaataaataag 30512801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 30552998 - 30553141
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaa-at 106  Q
    ||||||| ||| ||| ||||||| |||||||| ||||||| ||||||||||||||  || |||||||||  |||||||||||| | || |||||||| ||    
T  30552998 tagtcgtataaagtttatgcacgattattaaggaaatgattaattgtattgatttcaatggtaaaattaacatcatttactaagatactcttattaacat 30553097  T
Q  107 gtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||| | |||||||||||||| ||||| ||||||||||    
T  30553098 gtagttagtgaaatagttaagttggatgaaatttaataaataag 30553141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 27580707 - 27580599
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    ||||||| |||||| |||||||  || ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||     
T  27580707 aaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaatacccttattaattgtagttagtggagtagttaagttgaatgaaatta 27580608  T
Q  141 aataaataa 149  Q
    | |||||||    
T  27580607 attaaataa 27580599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 31655198 - 31655046
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  || ||| |||||||  ||||||| |||||| |||||||  || ||||||||| |||||||||||| || | |||||||    
T  31655198 aatattagtcgtttaaagtttgtgtacgattattaaagaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactataatatccttatt 31655099  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||||||||||| ||| |||| || |||||||||||||||| ||||    
T  31655098 aattgtagttagtggagtaattatgttgaatgaaattcaataaataagggtat 31655046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 41496225 - 41496079
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||| ||||||||  | |||| ||||||| ||||| || |||||| |||||||  || |||||||||||  |||||| ||||||| | |||||    
T  41496225 aatattagtcgattaaggtttgtacacgattattaaaaaaataattaattgtgttgatttcaatggtaaaattagttgcatttagtaaaacatcattatt 41496126  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||||||||||||| |||||| |||| ||||||||||    
T  41496125 aattgtagttagtggagtagttaaattggatgaaatgcaataaataa 41496079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 22848352 - 22848504
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||| |  | || | |||||||| ||  ||| |||||| |||||||  |||||||||||| ||  ||||| |||||||||||||||    
T  22848352 aatattagtcgtttaaggcttgtacaagattattaaggaagcgattaattgtgttgatttcaatagtaaaattaatagtatttattaaaacacccttatt 22848451  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||| |||||||||||  |||||| |||||||||||||||| ||||    
T  22848452 aattgtagttaatggagtagttagattggatgaaattcaataaataagggtat 22848504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 6615870 - 6615999
Alignment:
Q  25 tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt 124  Q
    |||||| |||||||  |||| || |||||| |||||||  || |||||||||||| ||||||| |||||| ||||||||| | ||||||||||||| |||    
T  6615870 tgcacgattattaaataaataattaattgtgttgatttcaatggtaaaattagtagcatttaccaaaacatccttattaattttagttagtggagtggtt 6615969  T
Q  125 aagttggataaaattcaataaataagagtat 155  Q
    |||||||||  ||||||||||||||| ||||    
T  6615970 aagttggat-gaattcaataaataagggtat 6615999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 11904346 - 11904203
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta-ttaaat 106  Q
    ||||||||||| |||  |||||| |  |||||||| |||| ||||||||||| ||  ||| |||||||| ||||||||||||||| || |||| |||| |    
T  11904346 tagtcgtttaatgtttgtgcacgatctttaagaaagtgattaattgtattgagttcaataataaaattaatatcatttactaaaatactcttatttaatt 11904247  T
Q  107 gtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||| ||||||||||||| || ||||||| ||||||| ||||    
T  11904246 gtagttggtggagtagttaaattcgataaaaatcaataattaag 11904203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 11796169 - 11796287
Alignment:
Q  37 aagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaa 136  Q
    ||||||||| | |||||| |||||||| ||  |||||||| ||| ||||||||||| |   ||||||| ||||||||||| |||||||||||| ||| ||    
T  11796169 aagaaaatggttaattgtgttgattttaatgataaaattaatattatttactaaaatattattattaattgtagttagtgtagtagttaagttagatgaa 11796268  T
Q  137 attcaataaataagagtat 155  Q
    ||| |||||||||||||||    
T  11796269 atttaataaataagagtat 11796287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 26285478 - 26285592
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||| |||||||| | |||  |||||||| |  |||||||||||||||||||  ||||||| | |||||| |||||||| || ||||||||||||| |||    
T  26285478 ttaataaaatgattagttgacttgattttaacggtaaaattagtatcatttatgaaaacacacgtattaattgtagttaatgaagtagttaagttgtata 26285577  T
Q  135 aaattcaataaataa 149  Q
    |||||||||||||||    
T  26285578 aaattcaataaataa 26285592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 4441129 - 4441020
Alignment:
Q  40 aaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaatt 139  Q
    ||||| || |||||| |||||||| ||  |||||||| ||| ||||||||||| |   ||||||| ||||||||||||||||||||| |||||| |||||    
T  4441129 aaaataattaattgtgttgattttaatgataaaattaatattatttactaaaatatttttattaattgtagttagtggagtagttaaattggatgaaatt 4441030  T
Q  140 caataaataa 149  Q
    ||||||||||    
T  4441029 caataaataa 4441020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 41492447 - 41492295
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaaca-cccttat 101  Q
    |||| ||||||| |||||||  ||| || || ||||||||||||| ||||||  | ||||  || |||||||||||  |||||||||||| | ||||| |    
T  41492447 aataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgacatttactaaaatatcccttgt 41492348  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||| |||| |||||||||| ||| |||||||||||||||| ||||    
T  41492347 taaatgtagttaatgga-tagttaagttagatgaaattcaataaataagggtat 41492295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 15439319 - 15439444
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| ||||||||| ||||  || ||||||||||||||||||||||||| ||  ||||||| |||| |||| | |||||||||||| |||     
T  15439319 ttaaggaaatgattaattgtattaatttcaatggtaaaattagtatcatttactaaaatacttttattaattgtatttagagtagtagttaagtttgat- 15439417  T
Q  135 aaattcaataaataagagtattataat 161  Q
     |||| |||||||||| |||| |||||    
T  15439418 taatttaataaataagggtataataat 15439444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 18841592 - 18841478
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||| |||||||| |||| |||||||||  || ||||||||| ||||||||| ||||| ||| ||||||| ||||||||||| | || |||| |||| |     
T  18841592 ttaaaaaaatgattaattatattgatttaaatggtaaaattaatatcatttaataaaataccgttattaattgtagttagtgaaataattaaattgggtg 18841493  T
Q  135 aaattcaataaataa 149  Q
    |||||||||||||||    
T  18841492 aaattcaataaataa 18841478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 41478972 - 41478820
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaaca-cccttat 101  Q
    |||| ||||||| |||||||  ||| || || ||||||||||||| ||||||  | ||||  || ||||||||||| ||||||||||||| | ||||| |    
T  41478972 aataatagtcgtctaaggtttgtgcgcgatttttaagaaaatgattaattgtgcttatttcaatggtaaaattagtgtcatttactaaaatatcccttgt 41478873  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||| || ||||| |||| |||||||||| ||| |||||||||||||||| ||||    
T  41478872 taattgcagttaatgga-tagttaagttagatgaaattcaataaataagggtat 41478820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 149
Target Start/End: Complemental strand, 39325929 - 39325862
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||| | ||| |||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  39325929 atttactaagatacctttattacatatagttagtggagtagttaagttggattaaattcaataaataa 39325862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 38161445 - 38161515
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaat 138  Q
    ||||||||  ||||||||||||||| | |||||||||  ||||||||||||||||||||||||||| ||||    
T  38161445 gtaaaattcatatcatttactaaaatatccttattaatcgtagttagtggagtagttaagttggatgaaat 38161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 5731892 - 5731808
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtg 116  Q
    |||||||||||||||| |||||| || ||||| |||  |||||  |||||||||||||||||| |||||||||  ||||||||||    
T  5731892 ttattaagaaaatgattaattgtgttcattttaataacaaaatgtgtatcatttactaaaacatccttattaatcgtagttagtg 5731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 7330587 - 7330507
Alignment:
Q  68 gtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||| ||||||| | |||||||| |||||||| | || |||||||||||||||| |||||||||||| |||| ||||    
T  7330587 gtaaaattaatatcattcagtaaaacactcttattaattctaattagtggagtagttaa-ttggataaaatttaatacataa 7330507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 29856126 - 29856065
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 130  Q
    |||||||| ||||| || |||||| || |||||||| |||||||||||||||||||||||||    
T  29856126 taaaattaatatcacttgctaaaatactcttattaattgtagttagtggagtagttaagttg 29856065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 5129232 - 5129348
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||||||||| || | ||| |||| |||  || ||||||||| ||| |||||||| ||||  |||||||| |||||||| | |||||||||| ||| |||    
T  5129232 ttaagaaaataattagttgcattggtttgaatggtaaaattaatataatttactataacattcttattaattgtagttattagagtagttaaattgaata 5129331  T
Q  135 aaattcaataaataaga 151  Q
    ||| | |||||||||||    
T  5129332 aaaattaataaataaga 5129348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 11761312 - 11761418
Alignment:
Q  48 aaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaat 147  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||| || ||||| || | || | |||| | |||||||||||| |  ||||||||||||    
T  11761312 aaattgtgttgattttaatggtaaaattagtatca-ttactaaaatactcttataaattatactaagtgaaatagttaagttggttggaattcaataaat 11761410  T
Q  148 aagagtat 155  Q
    ||| ||||    
T  11761411 aagcgtat 11761418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 38508155 - 38508266
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| ||  ||| || || ||||||||||||| |||||| || ||||  || ||||||||||||||| | | ||||| || ||||||    
T  38508155 aataatagtcgtttaagatttgtgctcgatttttaagaaaatgattaattgtgttaatttcaatggtaaaattagtatcactcattaaaatactcttatt 38508254  T
Q  103 aaatgtagttag 114  Q
    || |||||||||    
T  38508255 aattgtagttag 38508266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 37184079 - 37184193
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||| |||||||| |||||  |||||||  || ||||||||| ||||||||||||||| | | ||||| | |||||||| | || |  ||||||| |||     
T  37184079 ttaaaaaaatgattaattgagttgatttcaatggtaaaattaatatcatttactaaaatatctttattcattgtagttaatagactgattaagtttgatg 37184178  T
Q  135 aaattcaataaataa 149  Q
    |||||||||||||||    
T  37184179 aaattcaataaataa 37184193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 10598214 - 10598254
Alignment:
Q  109 agttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||| |||||||||||||||||||||| |||||||||    
T  10598214 agttagtgtagtagttaagttggataaaatttaataaataa 10598254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 32440286 - 32440174
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||| ||||||  |||| | || ||||  ||||||| |||||| || ||||  ||  |||||||| ||||||||||||||| |||||||||    
T  32440286 aataatagtcgttaaaggtttgtgcatgatttttaaagaaatgattaattgtgttaatttcaatgataaaattaatatcatttactaaaatacccttatt 32440187  T
Q  103 aaatgtagttagt 115  Q
    || |||| |||||    
T  32440186 aattgtacttagt 32440174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 39213417 - 39213369
Alignment:
Q  77 gtatcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||| |||| |||||||| |||||||| | ||||||||||||||||||    
T  39213417 gtatcctttaataaaacactcttattaattatagttagtggagtagtta 39213369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 3 - 212
Target Start/End: Original strand, 7951 - 8160
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||| |||| | ||||||| ||| ||||||||| ||| |||||| ||||||||||||||    
T  7951 aataatagtcgtttacggttgatgcacggttattaaggaaatgattaattttgttgatttggatggtaaaattaatattatttaccaaaacacccttatt 8050  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||||||| ||||||||||| || ||||||||||||| |||||||||| ||         |||||  ||||||||||||||||||||||    
T  8051 aattgtagttagtggagtaattaagttggatgaagttcaataaataagggtattataatgggaaaaaaataataaatgctgcattggtattctaaagtga 8150  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  8151 caattatttt 8160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 52291030 - 52290880
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||||| | |||    
T  52291030 tcgtttaaggttgatgtacggttattaagaaaatgattaattgtattgattttgatggtaaaattagtaccatttattaaaacagccttattaattatag 52290931  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||||| ||||| |||||||||||||  |||||||||    
T  52290930 ttagtggagtagttaagttgaataaagttcaataaataaggatattataat 52290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 45710995 - 45710848
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||| ||||||||| ||||||||||||||||||  |||||    
T  45710995 aataatagtcgtttaaggttgatgcacggttgttaagaaaatgattaattatgttgattttgatggtaaaattaatatcatttactaaaacacttttatt 45710896  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || |||||||||||||||||||||||||||| || |||||||||||||    
T  45710895 aattgtagttagtggagtagttaagttggatgaagttcaataaataag 45710848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 19823151 - 19823004
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||||| |||||||| ||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||| ||    
T  19823151 tagttgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgattttgatggtagaattagtatcatttactaaaacacccttattaattg 19823052  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  19823051 tagttagtggaatagttaagttggatgaaattcaataaataagggtat 19823004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 37312095 - 37311885
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||| |||||||||    
T  37312095 aatattagtcgtttaaggtttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaaaacccttatt 37311996  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || ||||||||||||||||||||| ||  || ||||||||||||||||||||| |||||||          |||||  |||||||| |||| ||||||||    
T  37311995 aattgtagttagtggagtagttaaatttaatgaaattcaataaataagagtataataatagaaaaataataataaatgctgcattgatattgtaaagtga 37311896  T
Q  203 caattatttta 213  Q
    |||||||||||    
T  37311895 caattatttta 37311885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 29023941 - 29024081
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||||||||  |||||||| ||    
T  29023941 tagtcgtttaaggtttatgcacgattattaaaaaaatgattaattgtgttgattttgatggtaaaattagtatcatttactaaaaca-tcttattaattg 29024039  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  29024040 tagttagtggagtaattaagttggatgaaattcaataaataa 29024081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 53560362 - 53560153
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||||||||||||||| | |||||| ||||||| |||| | ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  53560362 aataatagttgtttaaggttgatgcacgatgattaaggaaatgattaattatgttgattttgatggtaaaatttgtatcatttactaaaacacccttatt 53560263  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    |||| |||||||| |||||||||||||| || || ||||||||||||| || ||||||| |          |||||  ||||||| ||||||||||||||    
T  53560262 aaatatagttagtagagtagttaagttgaatgaagttcaataaataagggtgttataatggaaaaaaataaataaatgctgcattagtattctaaagtga 53560163  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  53560162 caattatttt 53560153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 30190635 - 30190777
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||||||  ||||||||||| ||| ||||||| |||||| |||||||  || ||||||||||||||||||||||||| ||||||||||| ||    
T  30190635 tagtcgtttaaggtttgtgcacggttatgaaggaaatgattaattgtgttgatttcaatggtaaaattagtatcatttactaaaatacccttattaattg 30190734  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  30190735 tagttagtggagtagttaagttggatgaaattcaattaataag 30190777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 37497629 - 37497491
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||| || ||||||| |||||||| |||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| |||||    
T  37497629 tcgtttaagatttatgcacgattattaaggaaatgatttattgtgttgattttgatggtaaaattagtatcatttactaaaacaccgttgttaactgtag 37497530  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  37497529 ttagtggagtagttaagttggatgaaattcaataaataa 37497491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 161
Target Start/End: Complemental strand, 54726618 - 54726472
Alignment:
Q  15 ttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttag 114  Q
    ||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||||||||||||| | ||||||| ||||||||     
T  54726618 ttaaggttgatgcacggttattaagaaaatgattaaatgtgttgattttgatggtaaaattaatatcatttactaaaacatctttattaattgtagttaa 54726519  T
Q  115 tggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||| ||| || || |||||||||| ||||||||||    
T  54726518 tggagtagttaagttagatgaagtttaataaataagggtattataat 54726472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 37695635 - 37695794
Alignment:
Q  3 aatactagtcgtttaaggttga-tgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttat 101  Q
    |||| |||||||||||||||   |||||| |||||||| ||||||| |||||| |||||||  || ||||||||| ||||||||||||||||||||||||    
T  37695635 aataatagtcgtttaaggttttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattaatatcatttactaaaacacccttat 37695734  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||    
T  37695735 taattgtagttagtggagtagttaagttagatgaaattcaataaataagggtataataat 37695794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 11905959 - 11905821
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    |||||||| ||| ||||||| |||||||||||||||| |||||| || ||||||||  ||||||||||||||||||||||| |||||||||||| |||||    
T  11905959 tcgtttaaagtttatgcacgattattaagaaaatgattaattgtgttaattttgatgataaaattagtatcatttactaaagcacccttattaattgtag 11905860  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||| |||||| |||||||||||| |||||||||||||||    
T  11905859 ttaatggagttgttaagttggatgaaattcaataaataa 11905821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 43253841 - 43253985
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||||||||||||||| |||||    
T  43253841 tcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaacacccttattaattgtag 43253940  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||| |||| ||||||| |||||||| ||||    
T  43253941 ttagtggagtagttaagtgggatgaaattcattaaataagggtat 43253985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 36476719 - 36476521
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  | |||||||||||||||||| ||  ||||| ||||||   || ||||||||| ||||||||||||||| ||||||||||| |||||||    
T  36476719 gtttaaggtttgttcacggttattaagaaaataattgattgtgttgattgcaatggtaaaattaatatcatttactaaaatacccttattaattgtagtt 36476620  T
Q  113 agtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtgacaattatttt 212  Q
    ||| ||||||||||||| ||| |||||||||||||||| |||| |||||| |         |||||  ||||||||||||||||||||||||||||||||    
T  36476619 agtagagtagttaagtttgatgaaattcaataaataagggtataataata-gaaaaaagtaataaatgctgcattggtattctaaagtgacaattatttt 36476521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 10366618 - 10366827
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccc-------ttat 101  Q
    ||||||||||||||  |||||| |||||||||||||||| |||||| |||||||  || ||||||||||||||||||| |||||||| |       ||||    
T  10366618 agtcgtttaaggtttgtgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtatcatttattaaaacactcttattaattat 10366717  T
Q  102 taaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtg 201  Q
    ||| ||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||| ||         |||||   ||||||||||||||||||||    
T  10366718 taattgtagttagtgaagtagttaagttggatgaaattcaataaataagggtataataat-gggaaaaaataataaatgttgcattggtattctaaagtg 10366816  T
Q  202 acaattatttt 212  Q
    |||||||||||    
T  10366817 acaattatttt 10366827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 212
Target Start/End: Complemental strand, 17652893 - 17652690
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||| ||||| ||||||| |||||||| ||||||| |||||| ||||||||||| |||||| ||||||    |||||||||| |||||||    
T  17652893 aataatagtcgtttgaggtttatgcacgattattaaggaaatgattaattgtgttgattttgatggtaaaactagtat----tactaaaacatccttatt 17652798  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataataggnnnnnnnntataaagactgcattggtattctaaagtga 202  Q
    || |||||||||||  ||||||||||||||| ||||| |||||||||| |||| ||||| |         |||||| ||||||||  |||||||||||||    
T  17652797 aattgtagttagtgaggtagttaagttggatgaaatttaataaataagggtataataattg--aaaaaattataaatactgcattaatattctaaagtga 17652700  T
Q  203 caattatttt 212  Q
    ||||||||||    
T  17652699 caattatttt 17652690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 24569075 - 24569214
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||| ||||| || ||||||| |||||||||||||||| |||||| |||||||  || ||||||||| ||| ||||||||||| ||||||||||| ||    
T  24569075 tagtcgcttaagatttatgcacgattattaagaaaatgattaattgtgttgatttcaatggtaaaattaatattatttactaaaatacccttattaattg 24569174  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaat 147  Q
    ||||||||||||||||||||||| || ||||||| |||||    
T  24569175 tagttagtggagtagttaagttgaatgaaattcattaaat 24569214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 8679029 - 8679176
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||||||||||| || ||||||| |||||||| ||||||| |||||| |||||||  || |||||||||||| |||||||||||| | ||||||||| |     
T  8679029 tagtcgtttaagatttatgcacgattattaaggaaatgattaattgtgttgatttcaatggtaaaattagtagcatttactaaaagatccttattaatta 8679128  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||||| | || ||||||||||| |||||||||||||||| ||||    
T  8679129 tagttagtgaattaattaagttggatgaaattcaataaataagggtat 8679176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 12736542 - 12736694
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||| |||||| |||  |||||| || ||||| ||||||| |||||| |||||| | ||  ||||||||||||||||||||| || |||||||||    
T  12736542 aataatagttgtttaaagtttgtgcacgatttttaaggaaatgattaattgtgttgattctaatgataaaattagtatcatttactacaatacccttatt 12736641  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||| |||||| ||||||||| ||||||||||||||||||||||| ||||    
T  12736642 aattgtacttagtgtagtagttaatttggataaaattcaataaataagggtat 12736694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 36460386 - 36460538
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  |||||| ||||||||||||| || |||||| || ||||  ||||||||||||||| |||||| ||||| |  ||||||    
T  36460386 aatattagtcgtttaaagtttgtgcacgattattaagaaaattattaattgtgttaatttcaatagtaaaattagtaacatttattaaaatattcttatt 36460485  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |||||||| ||||||| ||||||||||| |||||||||||||||| ||||    
T  36460486 aattgtagttaatggagtaattaagttggatgaaattcaataaataagggtat 36460538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 1778787 - 1778630
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||| | |||||||| ||||||| |||||| |||||||  ||  |||||||| |  |||||||||||||| |||||||    
T  1778787 aatattagtcgtttaaggtttgtgcatgattattaaggaaatgattaattgtgttgatttcaatgataaaattaatgacatttactaaaacatccttatt 1778688  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |  ||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||    
T  1778687 at-tgtagttagtggagtagataagttggatgaaattcaataaataagggtataataat 1778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 11632227 - 11632074
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacaccctta 100  Q
    |||||| ||||| |||||| ||  |||||| ||||||| |||||||| |||||| |||||||  |  ||||||||||||  ||||||||||||||| |||    
T  11632227 ataatattagtcatttaagatttgtgcacgattattaa-aaaatgattaattgtgttgatttcaacggtaaaattagtagtatttactaaaacaccttta 11632129  T
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||| |||||||||||||  ||||||||||||| ||||||||||||||| |||||    
T  11632128 ttaattgtagttagtggaaaagttaagttggatgaaattcaataaataaaagtat 11632074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 23004381 - 23004499
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||| ||||||| |||||| | |||||  || ||||||||||||  || |||||||||||||||||||| |||||||||||||||||||||||||     
T  23004381 ttattaaggaaatgattaattgtgtcgatttcaatggtaaaattagtagtatatactaaaacacccttattaattgtagttagtggagtagttaagttgt 23004480  T
Q  132 ataaaattcaataaataag 150  Q
    || ||||||||||||||||    
T  23004481 atgaaattcaataaataag 23004499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 44301641 - 44301555
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  44301641 taaaattagtatcatttactaaaatacccttatcaattgtaattagtggagtagttaagttggatgaaattcaataaataagagtat 44301555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 3313395 - 3313241
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||||||||||| |    | | |||||  || ||||||||||||  ||| |||||||||||||||||    
T  3313395 aatattagtcgtttaaggtttgtgcacgattattaagaaaatgatta----tgtcgatttcaatggtaaaattagtagaattaactaaaacacccttatt 3313300  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||||| ||||||| ||||||||||| ||||||||||||||||| ||| |||||    
T  3313299 aattgtagttaatggagtatttaagttggatgaaattcaataaataagattataataat 3313241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 161
Target Start/End: Original strand, 37772943 - 37773092
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||||||  |||| | |||||||| ||||||| |||||||||||||   || ||||||||| ||||||||||||||| ||||||||||| | ||||    
T  37772943 cgtttaaggtttgtgcatgattattaaggaaatgattaattgtattgattacaatggtaaaattaatatcatttactaaaatacccttattaattatagt 37773042  T
Q  112 tagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
     |||||| ||||||||||| || ||||||| |||||||| |||| |||||    
T  37773043 cagtggaatagttaagttgaatgaaattcattaaataagggtataataat 37773092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 161
Target Start/End: Original strand, 3901151 - 3901277
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| ||||||||| ||||  ||  |||||||| |||||||||||||||||  |||||||  |||||||||||| ||| |||||||||||     
T  3901151 ttaagaaaatgattaattgtattaatttcaatgataaaattaatatcatttactaaaacattcttattagttgtagttagtggggtacttaagttggatg 3901250  T
Q  135 aaattcaataaataagagtattataat 161  Q
    |||||||||||||||| |||| |||||    
T  3901251 aaattcaataaataagggtataataat 3901277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 34750603 - 34750495
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattc 140  Q
    |||||||  ||||| |||||||| || ||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||| ||| |     
T  34750603 aaatgattgattgtgttgattttaatggtaaaattagtatcatttactaaaacatccttattaattgtagttggtggagtagttaacttggatgaaaatt 34750504  T
Q  141 aataaataa 149  Q
    |||||||||    
T  34750503 aataaataa 34750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 34957648 - 34957501
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||||||| ||| ||  ||| |||| ||||||| |||||| |||| |||||| |||||||| |||| ||||||| ||| | |||||||    
T  34957648 aataatagtcgtttaaggtttatggacaattactaaggaaatgattaattgtgttgaatttgatggtaaaatttgtataatttacttaaatatccttatt 34957549  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataag 150  Q
    || | ||||||||||||||||| ||||  || ||||||||||||||||    
T  34957548 aattatagttagtggagtagttcagttaaatgaaattcaataaataag 34957501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 27471472 - 27471334
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||| ||  |||||| |||||||||||||||| |||| | |||||||  || || ||||||||  ||||||||||||||| |||||||| | ||     
T  27471472 tcgtttaagatttgtgcacgattattaagaaaatgattaattatgttgatttcaatggtgaaattagttgcatttactaaaacactcttattaattataa 27471373  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
     ||||||||||||||||||| || |||||||||||||||    
T  27471372 gtagtggagtagttaagttgaatgaaattcaataaataa 27471334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 39043799 - 39043885
Alignment:
Q  75 tagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||| |||||    
T  39043799 tagtatcatttactaaaatacctttattaattgtagttagtggagtagttaagttgaatgaaattcaataaataagggtataataat 39043885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 149
Target Start/End: Original strand, 28690762 - 28690898
Alignment:
Q  13 gtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtt 112  Q
    ||||||||||  |||||| |||||||  ||||||| |||||| |||||||  |  ||||||||| ||||||||||||||| | | ||||||| |||||||    
T  28690762 gtttaaggtttgtgcacgattattaaagaaatgattaattgtgttgatttcaacggtaaaattaatatcatttactaaaatatctttattaattgtagtt 28690861  T
Q  113 agtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||   |||||||||||||| |||||||||||||||    
T  28690862 agtgagatagttaagttggatgaaattcaataaataa 28690898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 51837934 - 51838081
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    ||||| |||||||||  |||| |  ||||||| ||||||| |||||| |||||||  ||  |||||||| ||||||||||||||| ||||||||||  ||    
T  51837934 tagtcatttaaggtttgtgcatgagtattaagtaaatgattaattgtgttgatttcaatgataaaattaatatcatttactaaaatacccttattagttg 51838033  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||| |||||||||||||| |||| || ||||||| |||||||| ||||    
T  51838034 tagctagtggagtagttacgttgaatgaaattcattaaataagggtat 51838081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 30711207 - 30711070
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||  ||||  ||||||||  |||| || |||| | |||||||| ||  |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  30711207 tttaaggtttgtgcattgttattaaagaaataattaattatgttgattttaatgataaaattaatatcatttactaaaacaccattattaattgtagtta 30711108  T
Q  114 gtggagtagttaagttggataaaattcaataaataaga 151  Q
     ||||| | ||||||| ||| |||||||||||||||||    
T  30711107 atggagcaattaagttagatgaaattcaataaataaga 30711070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 143
Target Start/End: Complemental strand, 43719380 - 43719272
Alignment:
Q  34 attaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggat 133  Q
    ||||| |||||||| |||||| |||||||| || ||||||||| ||||||| ||| ||||| ||||||||| ||||||||||||||||||||| ||||||    
T  43719380 attaataaaatgattaattgtgttgattttaatggtaaaatta-tatcattcactgaaacatccttattaattgtagttagtggagtagttaaattggat 43719282  T
Q  134 aaaattcaat 143  Q
      ||||||||    
T  43719281 ggaattcaat 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 159
Target Start/End: Complemental strand, 19612021 - 19611898
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    |||||||| |||| |||||| |||||||  ||  |||||||| ||| ||||||||||| | ||||||||| ||| |||||||||||||||||||| |||     
T  19612021 ttaagaaagtgattaattgtgttgatttcaatgttaaaatta-tataatttactaaaatatccttattaattgttgttagtggagtagttaagtttgatg 19611923  T
Q  135 aaattcaataaataagagtattata 159  Q
    |||||||||||||||  ||||||||    
T  19611922 aaattcaataaataaatgtattata 19611898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 30682068 - 30682196
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||| ||||||| |||||| || ||||| ||  |||||| ||||||||||||||||| |  |||||||| |||||||| |||| || ||||||||||      
T  30682068 ttaaggaaatgattaattgttttaattttaatgttaaaatgagtatcatttactaaaataatcttattaattgtagttaatggaataattaagttggacg 30682167  T
Q  135 aaattcaataaataagagtattataatag 163  Q
    ||||||||||||||| ||||| |||||||    
T  30682168 aaattcaataaataatagtatgataatag 30682196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 38795489 - 38795346
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||||||||| |||  |||||| |  ||||| ||||||| |||||| || ||||  || ||||||||||||||||||||  |||  ||||||||    
T  38795489 aataatagtcgtttaatgtttgtgcacgatatttaaggaaatgattaattgtgtttatttcaatggtaaaattagtatcatttacccaaatgcccttatt 38795390  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaa 146  Q
    || ||||||| ||||||| |||||||||||| ||||| ||||||    
T  38795389 aattgtagttggtggagttgttaagttggatgaaatttaataaa 38795346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 19609412 - 19609298
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggata 134  Q
    ||||||||||||| | |||| |||||||  || ||||||||| |||||||||| |||| |  |||||||  ||| ||||||||||||| |||||| ||||    
T  19609412 ttaagaaaatgattatttgtgttgatttcaatcgtaaaattaatatcatttacaaaaatattcttattacttgttgttagtggagtagataagtttgata 19609313  T
Q  135 aaattcaataaataa 149  Q
    |||||||||||||||    
T  19609312 aaattcaataaataa 19609298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 36462944 - 36463062
Alignment:
Q  31 gttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 130  Q
    |||||||| ||||||||  || ||||||||||| ||  ||||||| ||| |||||||||||| | ||||||||| ||| ||| |||||||| ||||||||    
T  36462944 gttattaaaaaaatgattgatagtattgattttaatgttaaaattggtagcatttactaaaataaccttattaattgttgtttgtggagtaattaagttg 36463043  T
Q  131 gataaaattcaataaataa 149  Q
    ||| ||||| |||||||||    
T  36463044 gatgaaattaaataaataa 36463062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 14194694 - 14194555
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    ||||||||||||||  |||||| || ||||  ||||||| |||||| |||||||  ||  ||||||||||| |||||||||||| ||  |||| || |||    
T  14194694 agtcgtttaaggtttgtgcacgatttttaaagaaatgatcaattgtgttgatttcaatgataaaattagtaccatttactaaaatacttttatgaattgt 14194595  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataa 149  Q
     |||||||||||| ||||||||||| ||||||||| |||||    
T  14194594 -gttagtggagtaattaagttggatgaaattcaattaataa 14194555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 49830270 - 49830162
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaa-tgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaat 106  Q
    ||||||||||| |||  |||||| ||||||| |||| |||| |||||| |||||||  |||||||||||| ||||||||||||||| ||| ||||||| |    
T  49830270 tagtcgtttaacgtttgtgcacgattattaaaaaaaatgattaattgtgttgatttcaatagtaaaattaatatcatttactaaaataccattattaatt 49830171  T
Q  107 gtagttagt 115  Q
    |||||||||    
T  49830170 gtagttagt 49830162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 5322914 - 5323065
Alignment:
Q  8 tagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatg 107  Q
    |||| ||||||||||  |||||| |||||||  ||||||| |||| | |||||||   |  |||||||| ||||||||||||||| || |||||||| |     
T  5322914 tagttgtttaaggtttgtgcacgattattaa--aaatgattaattatgttgatttcagtgataaaattaatatcatttactaaaatacacttattaatta 5323011  T
Q  108 tagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||  |||||||||||| ||| |||||||||||||||| |||| |||||    
T  5323012 taattagtaaagtagttaagtttgatgaaattcaataaataagggtataataat 5323065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31158490 - 31158583
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacac 95  Q
    |||||| |||||||||||||||  |||||| ||||||| |||||||| ||||||  |||||| ||||||||||||| || |||||||||||||||    
T  31158490 ataatattagtcgtttaaggtttgtgcacgattattaa-aaaatgattaattgtgctgatttcgatagtaaaattaataacatttactaaaacac 31158583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 38705226 - 38705163
Alignment:
Q  97 cttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataa 160  Q
    |||||||| |||||||||| ||||| ||||||| ||| ||||||||||||||||||||||||||    
T  38705226 cttattaattgtagttagttgagtaattaagttagatgaaattcaataaataagagtattataa 38705163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 12904914 - 12904857
Alignment:
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||| ||||    
T  12904914 ttattaattgtagttagtggagtaattaagttggatgaaattcaataaataagggtat 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 54477475 - 54477556
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttg 130  Q
    |||||| |||||||| || ||||||||| ||||||||||||||| |   ||||||| |||||||| ||||||||||||||||    
T  54477475 aattgtgttgattttaatggtaaaattaatatcatttactaaaatatttttattaattgtagttaatggagtagttaagttg 54477556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 33491408 - 33491482
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggat-aaaattcaataaataagagtat 155  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||| || ||| || |||||||||| ||||    
T  33491408 atttactaaaacactcttattaattatagttagtggagtagttaagttgtatgaaattttaataaataagggtat 33491482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 38137411 - 38137562
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtat---catttactaaaacaccc 97  Q
    |||||| |||||||||||||||  |||| | |||| ||  |||| ||  ||||| | |||||  |||||||||||||||    ||| |||||||| |  |    
T  38137411 ataatattagtcgtttaaggtttgtgcatgattataaatgaaataattcattgtgtcgatttcaatagtaaaattagtactgacatctactaaaatattc 38137510  T
Q  98 ttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||| |||||||||||| |||||||| || ||| |||||||||||||||    
T  38137511 ttattaactgtagttagtggggtagttaaattcgatgaaattcaataaataa 38137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 50035198 - 50035299
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    |||||||||  |||| | |||||||||||||||  |||| | |||||||  ||| ||||||||||| ||||||| |||||||| || |||| ||||||||    
T  50035198 tttaaggtttgtgcatgattattaagaaaatgaataattatgttgatttcaataataaaattagtagcatttaccaaaacaccgttgttaattgtagtta 50035297  T
Q  114 gt 115  Q
    ||    
T  50035298 gt 50035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 33491053 - 33491125
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaatt 75  Q
    |||| |||||||||||||||  |||||| |||||||| ||||||| |||||| |||||||  |||||||||||    
T  33491053 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttgatttcaatagtaaaatt 33491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 40462366 - 40462319
Alignment:
Q  101 ttaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||    
T  40462366 ttaattgtagttagaagagtagttaagttggataaaattcaataaata 40462319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 41038448 - 41038521
Alignment:
Q  88 taaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||| || |||||||| |||||||| || |||||||||||||| | || |||||||||||||  |||||||||    
T  41038448 taaaatactcttattaattgtagttaatgaagtagttaagttggttgaagttcaataaataaggatattataat 41038521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 41351639 - 41351680
Alignment:
Q  108 tagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  41351639 tagttagtggagtagttaagttgaatgaaattcaataaataa 41351680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 48541036 - 48541109
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaa 142  Q
    |||||||| ||||||||| ||||| |  |||||||| |||| ||||| |||||||||||||| || ||||||||    
T  48541036 taaaattaatatcatttattaaaatattcttattaattgtaattagttgagtagttaagttgaatgaaattcaa 48541109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 155
Target Start/End: Original strand, 49447840 - 49447913
Alignment:
Q  82 atttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||| |||| ||||||||||| |||||||||| || ||||||| || ||| ||||| |||||||||| ||||    
T  49447840 atttaccaaaatacccttattaattgtagttagtagaatagttaaatttgatgaaatttaataaataagggtat 49447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 42469724 - 42469803
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    ||||| ||||||||||| || |||||||| | |||||||| ||||| ||| || |  || ||||||||||||||||||||    
T  42469724 agtataatttactaaaatactcttattaactctagttagttgagtatttaggtggattataattcaataaataagagtat 42469803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 23068270 - 23068185
Alignment:
Q  75 tagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||| |||| ||| ||||||| ||||||| ||||||| ||| | || ||||||| ||| ||||||||||||||| ||||| |||||    
T  23068270 tagtagcattcactgaaacacc-ttattaattgtagtttgtgaaatatttaagttagatgaaattcaataaataaaagtataataat 23068185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 27549323 - 27549401
Alignment:
Q  71 aaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||  |||||||||||||| | ||||||  | |||||||||| |||||||| ||  || |||||||||||||||    
T  27549323 aaattagttgcatttactaaaacaacattattagttatagttagtggcgtagttaaattaaattaaattcaataaataa 27549401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 212
Target Start/End: Complemental strand, 38795311 - 38795281
Alignment:
Q  182 tgcattggtattctaaagtgacaattatttt 212  Q
    |||||||||||||||||||||||||||||||    
T  38795311 tgcattggtattctaaagtgacaattatttt 38795281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 51064786 - 51064864
Alignment:
Q  1 ataatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagta 79  Q
    |||||| ||||||||||| ||| |||||||  |||||| |||||||| |||||| ||| |||  || ||||||||||||    
T  51064786 ataatattagtcgtttaaagtttatgcacgaatattaaaaaaatgattaattgtgttgctttcaatggtaaaattagta 51064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 24245117 - 24245209
Alignment:
Q  56 ttgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    |||||||  ||| |||||||||||| |||||||||||||   ||||||| |||| |||||  ||||||||| | ||||  ||||||||||||||    
T  24245117 ttgatttcaataataaaattagtattatttactaaaaca-tattattaattgtacttagtaaagtagttaaatcggatgcaattcaataaataa 24245209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 29595729 - 29595786
Alignment:
Q  35 ttaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaa 92  Q
    ||||||||||| | |||| |||||||||| |||||||||||| ||| ||||| |||||    
T  29595729 ttaagaaaatggttaattatattgattttaatagtaaaattaatattatttattaaaa 29595786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 211
Target Start/End: Original strand, 39043903 - 39043932
Alignment:
Q  182 tgcattggtattctaaagtgacaattattt 211  Q
    ||||||||||||||||||||||||||||||    
T  39043903 tgcattggtattctaaagtgacaattattt 39043932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 39931749 - 39931656
Alignment:
Q  28 acggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagta 121  Q
    |||||||||||  |||| || ||| || |||||||| || | |||||  |||||||||| |||||||| |||||||| | ||||||||| ||||    
T  39931749 acggttattaaagaaattattaatagtgttgattttaatggcaaaatatgtatcatttattaaaacacacttattaattatagttagtgaagta 39931656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 149
Target Start/End: Complemental strand, 40194563 - 40194502
Alignment:
Q  88 taaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||| || |||||||| |||||||||||| |||||| |||||||  ||||| |||||||||    
T  40194563 taaaatactcttattaattgtagttagtggcgtagttgagttggaagaaatttaataaataa 40194502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 42278772 - 42278695
Alignment:
Q  41 aaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtgga 118  Q
    ||||||| | ||| ||||||||  || |||||||||  ||||||||||||||||| | |||||| | |||||||||||    
T  42278772 aaatgattagttgaattgatttcaatcgtaaaattaacatcatttactaaaacactcatattaattatagttagtgga 42278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 54225883 - 54225928
Alignment:
Q  80 tcatttactaaaacacccttattaaatgtagttagtggagtagtta 125  Q
    ||||||||||||||| ||||||||| | ||||||||||||| ||||    
T  54225883 tcatttactaaaacagccttattaattatagttagtggagtggtta 54225928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 37804898 - 37804854
Alignment:
Q  85 tactaaaacacccttattaaatgtagttagtggagtagttaagtt 129  Q
    |||||||| ||||||||||| | | ||||||||||||||||||||    
T  37804898 tactaaaatacccttattaattatggttagtggagtagttaagtt 37804854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 1849 - 1691
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| || || ||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  1849 aataatagtcgtttaagatttatacacggttattaagaaaatgattaattatgttgattttgatggtaaaattagtatcatttacttaaacacccgtatt 1750  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    || |||||| ||||||||||||||||||||| |||||||||||||||| |||| |||||    
T  1749 aattgtagtcagtggagtagttaagttggattaaattcaataaataagggtataataat 1691  T

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Target: scaffold0159 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 33989 - 34135
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| ||||| |||||||||  |||||| |||||||| ||||||| ||||||||||| ||  ||||||||||||||  ||||||||||||||||||||||    
T  33989 aatattagtcatttaaggtttgtgcacgattattaaggaaatgattaattgtattgaattcaatagtaaaattagtggcatttactaaaacacccttatt 34088  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || ||||||||||| | |||||||||||||| |||||||||||||||    
T  34089 aattgtagttagtgaaatagttaagttggatgaaattcaataaataa 34135  T

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Target: scaffold0182 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 160
Target Start/End: Original strand, 20352 - 20480
Alignment:
Q  32 ttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttgg 131  Q
    |||||||  ||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||| || |||||||| ||||||||||||||    
T  20352 ttattaattaaatgattaattgtgttgattttgattgtaaaattagtatcatttagtaaaatacccttattaattgcagttagtgaagtagttaagttgg 20451  T
Q  132 ataaaattcaataaataagagtattataa 160  Q
    || ||||||||||||| || |||| ||||    
T  20452 atgaaattcaataaatgagggtataataa 20480  T

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Target: scaffold0330 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 5527 - 5389
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtag 110  Q
    ||||||||||||  | || | |||||||||||||||| || ||| |||| ||  || ||||||||| ||||||||||||||| | ||||||||| | |||    
T  5527 tcgtttaaggtttgtacatgattattaagaaaatgattaactgtgttgaattcaatggtaaaattaatatcatttactaaaatatccttattaattttag 5428  T
Q  111 ttagtggagtagttaagttggataaaattcaataaataa 149  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5427 ttagtggagtagttaagttggatgaaattcaataaataa 5389  T

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Target: scaffold0012 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 161
Target Start/End: Complemental strand, 105820 - 105671
Alignment:
Q  12 cgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagt 111  Q
    |||||||| || ||||| | |||||||| ||||||| |||||| || ||||  || ||||||||| || | |||||||||||||||||||||| ||||||    
T  105820 cgtttaagatttatgcatgattattaagtaaatgattaattgtgtttatttcaatggtaaaattaatagcgtttactaaaacacccttattaattgtagt 105721  T
Q  112 tagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||| ||||||||||||| || |||||| ||||||||| |||| |||||    
T  105720 tagtgaagtagttaagttgaatgaaattcgataaataagggtataataat 105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 2164 - 2012
Alignment:
Q  9 agtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgt 108  Q
    |||||||||||||| ||||||| |||||||| || |||| |||||| || ||||  ||  |||||||| ||||||||||||||||| ||||||||| |||    
T  2164 agtcgtttaaggttcatgcacgattattaaggaagtgattaattgtgttaatttcaatgataaaattaatatcatttactaaaacatccttattaattgt 2065  T
Q  109 agttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    |||||||||| || |||  || ||| |||||||||||||||| |||| |||||    
T  2064 agttagtggattaattacattcgatgaaattcaataaataagggtataataat 2012  T

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Target: scaffold0294 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 17180 - 17034
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||| | |||||||||||||||| |||||| |||||||  || |||||||||||| |||||| || ||||||||||||    
T  17180 aatattagtcgtttaaggtttgtgcatgattattaagaaaatgattaattgtgttgatttcaatggtaaaattagtagcatttattagaacacccttatt 17081  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || | |||||| ||| ||| ||| |||| || |||||||||||||||    
T  17080 aattatagttaatggcgtaattacgttgaatgaaattcaataaataa 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 136007 - 136153
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||| || ||||||| |||||||  ||||||| |||  | |||||||  || ||||||||| || ||||||||||||||||||||||    
T  136007 aatattagtcgtttaagatttatgcacgattattaaataaatgattaataatgttgatttcaatggtaaaattaatagcatttactaaaacacccttatt 136106  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataa 149  Q
    || | ||||||||| |||||||||||| ||| ||||| |||||||||    
T  136107 aattatagttagtgaagtagttaagtttgatgaaattaaataaataa 136153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 16219 - 16096
Alignment:
Q  27 cacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaa 126  Q
    |||| |||||||| ||||||| |||||| |||||||| ||  |||||||| || ||||||||||||||| |||||||| |||||||| || || ||||||    
T  16219 cacgattattaaggaaatgattaattgtgttgattttaatgataaaattaatagcatttactaaaacacacttattaattgtagttaatgaagcagttaa 16120  T
Q  127 gttggataaaattcaataaataag 150  Q
    | ||||| ||||||||||||||||    
T  16119 gatggatgaaattcaataaataag 16096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 50349 - 50197
Alignment:
Q  3 aatactagtcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttatt 102  Q
    |||| |||||||||||||||  |||||| |||||||| ||||||| |||||| || ||||  ||  ||||||||||||||||||||| || | | |||||    
T  50349 aatattagtcgtttaaggtttgtgcacgattattaaggaaatgattaattgtgttaatttcaatgataaaattagtatcatttactataatatctttatt 50250  T
Q  103 aaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    || |  ||||||||||||| |||||||| || ||||| |||||||||| ||||    
T  50249 aattacagttagtggagtaattaagttgaatgaaattaaataaataagggtat 50197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 22427 - 22345
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagtt-aagttggataaaattcaataaataag 150  Q
    |||||||||||||||||||||||| | | |||||||  || ||||||| ||||||| || |||||||||||||||||||||||    
T  22427 taaaattagtatcatttactaaaatatctttattaatcgtggttagtgcagtagttaaaattggataaaattcaataaataag 22345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 1798 - 1897
Alignment:
Q  14 tttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagtta 113  Q
    ||||| ||| ||||||| ||||||||||||| || |||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||| | ||||||    
T  1798 tttaaagtttatgcacgattattaagaaaataattaattgtgttgattttgatagtcaaattaatatcatttactaaaacacctttattaattatagtta 1897  T

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Target: scaffold1809 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 700 - 806
Alignment:
Q  49 aattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaata 148  Q
    |||||| |||||||  || ||||||||| || |||||||||||||||| ||||| | |||||||||||||||  |||| |||||| ||||||||||||||    
T  700 aattgtgttgatttcaatggtaaaattaatagcatttactaaaacacctttattgattgtagttagtggagtgtttaaattggatgaaattcaataaata 799  T
Q  149 agagtat 155  Q
    || ||||    
T  800 agggtat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 39225 - 39127
Alignment:
Q  11 tcgtttaaggttgatgcacggttattaagaaaatgataaattgtattgattttgatagtaaaattagtatcatttactaaaacacccttattaaatgta 109  Q
    ||||||||||||  |||||  |||||||| ||||||| |||||| |||||||||||  | |||||||||||||||||||||||| | ||||||| ||||    
T  39225 tcgtttaaggtttttgcacaattattaaggaaatgattaattgtgttgattttgatgatgaaattagtatcatttactaaaacatcattattaattgta 39127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 252848 - 252932
Alignment:
Q  76 agtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtattataat 161  Q
    ||||||||||||||||| | | ||||||| |||||| | |||||||||||||||| || ||||||||||||||||||||| |||||    
T  252848 agtatcatttactaaaatatcgttattaattgtagt-attggagtagttaagttgaatgaaattcaataaataagagtataataat 252932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2146 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 484 - 398
Alignment:
Q  69 taaaattagtatcatttactaaaacacccttattaaatgtagttagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||| | |||||||||||||||||  |||||||||||| || ||||||  | || ||||||||||||||| ||||    
T  484 taaaattagtatcattcaataaaacacccttattaatagtagttagtggattaattaagtaaggtagaattcaataaataagggtat 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 6089 - 6041
Alignment:
Q  97 cttattaaatgtagttagtggagtagttaagttggataaaattcaataa 145  Q
    |||||||| | || |||||||||||||||| ||||||||||||||||||    
T  6089 cttattaattatacttagtggagtagttaatttggataaaattcaataa 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 155
Target Start/End: Complemental strand, 76328 - 76285
Alignment:
Q  112 tagtggagtagttaagttggataaaattcaataaataagagtat 155  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  76328 tagtggagtagttaagttagatgaaattcaataaataagggtat 76285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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