View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2493_low_17 (Length: 236)

Name: NF2493_low_17
Description: NF2493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2493_low_17
NF2493_low_17
[»] chr7 (3 HSPs)
chr7 (15-195)||(7430036-7430218)
chr7 (71-130)||(40362011-40362070)
chr7 (60-136)||(41850633-41850709)
[»] chr4 (8 HSPs)
chr4 (65-130)||(26066411-26066476)
chr4 (71-130)||(20114107-20114166)
chr4 (91-128)||(25445191-25445228)
chr4 (81-138)||(30206526-30206583)
chr4 (60-137)||(45828449-45828526)
chr4 (71-130)||(22235304-22235363)
chr4 (60-138)||(43117887-43117965)
chr4 (60-136)||(53225679-53225755)
[»] chr6 (5 HSPs)
chr6 (71-138)||(8920482-8920549)
chr6 (74-146)||(4981005-4981080)
chr6 (60-129)||(7649836-7649905)
chr6 (73-138)||(24265504-24265569)
chr6 (101-138)||(32974257-32974294)
[»] chr1 (5 HSPs)
chr1 (66-128)||(101519-101581)
chr1 (105-141)||(26533665-26533701)
chr1 (66-128)||(101519-101581)
chr1 (71-136)||(39514982-39515047)
chr1 (73-129)||(37921703-37921759)
[»] chr2 (1 HSPs)
chr2 (60-136)||(41153146-41153222)
[»] chr8 (8 HSPs)
chr8 (71-130)||(10396833-10396892)
chr8 (60-129)||(27976764-27976833)
chr8 (60-129)||(28034033-28034102)
chr8 (65-138)||(10107318-10107387)
chr8 (105-141)||(17855862-17855898)
chr8 (65-137)||(27789313-27789385)
chr8 (65-129)||(27789321-27789385)
chr8 (105-141)||(33058608-33058644)
[»] chr3 (4 HSPs)
chr3 (98-141)||(17103716-17103759)
chr3 (64-130)||(29290819-29290885)
chr3 (66-119)||(19674624-19674677)
chr3 (66-130)||(32711245-32711309)
[»] scaffold0025 (1 HSPs)
scaffold0025 (66-152)||(65970-66055)
[»] chr5 (1 HSPs)
chr5 (63-136)||(12569172-12569245)


Alignment Details
Target: chr7 (Bit Score: 152; Significance: 1e-80; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 7430036 - 7430218
Alignment:
Q  15 aatttacatactcccccagtttcatatacatgcaaaacttttttgtttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatc 114  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7430036 aatttacagactcccccagtttcatatacatgcaaaacttttttgtctaaattcagtgaataatttatgtatttggtttacaatatagaccagatacatc 7430135  T
Q  115 agttatttaatgaatcagaaaaaacaa--tttgttttttacctaatacatctttgatgagaagtgtgtacatgctaaataaac 195  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7430136 agttatttaatgaatcagaaaaaacaaatttttttttttacctaatacatctttgatcagaagtgtgtacatgctaaataaac 7430218  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 40362070 - 40362011
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    ||||| ||| ||||||||||| ||||||||||| || |||||||| ||||| ||||||||    
T  40362070 tgaatgattaatgtatttggtctacaatataaatcaaatacatcaattattcaatgaatc 40362011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 41850633 - 41850709
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaa 136  Q
    |||| ||||| ||||||||| ||||||||||| || |||||| | || |||||||| ||||  ||||||||| ||||    
T  41850633 tttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaaaaa 41850709  T

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Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 26066411 - 26066476
Alignment:
Q  65 attcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    ||||| ||||||||| ||||||  ||| || |||||| ||||||||||||||||||||||||||||    
T  26066411 attcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatc 26066476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 20114107 - 20114166
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    |||||||||||||||||||||||| |||||| |||| |||||| ||||||| ||| ||||    
T  20114107 tgaataatttatgtatttggtttagaatatagaccatatacattagttattcaattaatc 20114166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 25445228 - 25445191
Alignment:
Q  91 tttacaatataaaccagatacatcagttatttaatgaa 128  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25445228 tttataatataaaccagatacatcagttatttaatgaa 25445191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 30206526 - 30206583
Alignment:
Q  81 atgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    ||||||||||| || | |||||||||||||||||| ||||| |||||||| |||||||    
T  30206526 atgtatttggtctatattataaaccagatacatcaattattcaatgaatctgaaaaaa 30206583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 45828526 - 45828449
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaa 137  Q
    |||| ||||| ||| ||||| ||||||||||| || ||||||||||| |||||||| |||| ||| |||||| |||||    
T  45828526 tttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaaagaatcaaaaaaa 45828449  T

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Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 22235304 - 22235363
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    ||||||||| || |||||| | |  |||||||||||||||||||||||||| ||||||||    
T  22235304 tgaataattgatatatttgatctttaatataaaccagatacatcagttattcaatgaatc 22235363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 43117965 - 43117887
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    |||| ||||| ||||||||| ||||||||||| || |||||| |||| |||||||| ||||  ||| ||||| ||||||    
T  43117965 tttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatcaaaaaaaa 43117887  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 53225755 - 53225679
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaa 136  Q
    |||| ||||| ||||||||| ||||||||||| || ||| || |||| |||||||| ||||  ||||||||| ||||    
T  53225755 tttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaa 53225679  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 8920549 - 8920482
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    ||||||||| ||||||||| |||| ||||||  | || ||||||||||||| ||||||||||||||||    
T  8920549 tgaataattgatgtatttgatttataatatagtcaaggtacatcagttattcaatgaatcagaaaaaa 8920482  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 4981080 - 4981005
Alignment:
Q  74 ataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc---agaaaaaacaatttgt 146  Q
    |||||| |||| ||||||||||||||||||| | |||||||||||||| ||| ||||   ||||||||||| ||||    
T  4981080 ataattaatgtttttggtttacaatataaactaaatacatcagttattaaataaatctggagaaaaaacaaattgt 4981005  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 7649836 - 7649905
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaat 129  Q
    |||| ||||| ||||||||| ||||||||||| || |||||| |||| ||| |||| ||||| |||||||    
T  7649836 tttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaat 7649905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Complemental strand, 24265569 - 24265504
Alignment:
Q  73 aataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    ||||||| |||||| ||  ||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  24265569 aataattgatgtatctgaattataatatagtccatatacatcagttatttaatgaatctgaaaaaa 24265504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 138
Target Start/End: Original strand, 32974257 - 32974294
Alignment:
Q  101 aaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  32974257 aaaccagatatatcagttatttaatgaatctgaaaaaa 32974294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 101519 - 101581
Alignment:
Q  66 ttcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaa 128  Q
    |||| ||||||||| |||||| ||||||||||| |||||||||||||| | ||||| ||||||    
T  101519 ttcattgaataattaatgtatctggtttacaatgtaaaccagatacattaattattcaatgaa 101581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 26533665 - 26533701
Alignment:
Q  105 cagatacatcagttatttaatgaatcagaaaaaacaa 141  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26533665 cagatacatcagttatttaatgaatctgaaaaaacaa 26533701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 101581 - 101519
Alignment:
Q  66 ttcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaa 128  Q
    |||| ||||||||| |||||| ||||||||| | |||||||||||||| | ||||| ||||||    
T  101581 ttcattgaataattaatgtatctggtttacattgtaaaccagatacattaattattcaatgaa 101519  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 39514982 - 39515047
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaa 136  Q
    ||||||| | |||||| ||||||| |||||| | ||||||||  |||||||||||||||| |||||    
T  39514982 tgaataactaatgtatctggtttataatatatatcagatacaatagttatttaatgaatctgaaaa 39515047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 37921703 - 37921759
Alignment:
Q  73 aataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaat 129  Q
    ||||||| |||||||| ||||| ||||||  ||| |||||| |||||||||||||||    
T  37921703 aataattgatgtatttagtttataatatagtccaaatacataagttatttaatgaat 37921759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 41153222 - 41153146
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaa 136  Q
    |||| ||||| ||| ||||| |||||||||||||| |||||| |||| |||||||| ||||  ||||||||| ||||    
T  41153222 tttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatcaaaaaa 41153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Complemental strand, 10396892 - 10396833
Alignment:
Q  71 tgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| ||||||| ||| ||||    
T  10396892 tgaacaatttatgtatttggtttagaatatagaccatatacattagttattcaattaatc 10396833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 27976833 - 27976764
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaat 129  Q
    |||| ||||| ||||||||| |||||| |||| |||| |||| ||||||| ||| | |||||||||||||    
T  27976833 tttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatgaat 27976764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 28034102 - 28034033
Alignment:
Q  60 tttaaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaat 129  Q
    |||| ||||| ||||||||| |||||| |||| |||| |||| ||||||| ||| | |||||||||||||    
T  28034102 tttagattcattgaataattaatgtatctggtctacattatagaccagatgcattaattatttaatgaat 28034033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 10107318 - 10107387
Alignment:
Q  65 attcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaa 138  Q
    ||||| ||||||||| |||||| ||||    |||||| ||||||||||||||||||| |||||| | |||||||    
T  10107318 attcattgaataattaatgtatatggt----aatatagaccagatacatcagttattcaatgaaactgaaaaaa 10107387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 17855898 - 17855862
Alignment:
Q  105 cagatacatcagttatttaatgaatcagaaaaaacaa 141  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  17855898 cagatacatcaattatttaatgaatctgaaaaaacaa 17855862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 27789385 - 27789313
Alignment:
Q  65 attcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaa 137  Q
    ||||| ||||||| | |||||||||||  | | |||| ||||||||||||| ||||| ||||||||| |||||    
T  27789385 attcattgaataactgatgtatttggtcaatattatataccagatacatcaattattcaatgaatcaaaaaaa 27789313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 27789321 - 27789385
Alignment:
Q  65 attcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaat 129  Q
    ||||| ||||||||| |||||| |||| || |||||  |||| |||||||||||||| |||||||    
T  27789321 attcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaat 27789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 33058644 - 33058608
Alignment:
Q  105 cagatacatcagttatttaatgaatcagaaaaaacaa 141  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  33058644 cagatacatcaattatttaatgaatctgaaaaaacaa 33058608  T

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Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 17103716 - 17103759
Alignment:
Q  98 tataaaccagatacatcagttatttaatgaatcagaaaaaacaa 141  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  17103716 tataatccagatacatcagttatttaatgaatctgaaaagacaa 17103759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Complemental strand, 29290885 - 29290819
Alignment:
Q  64 aattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    |||||| ||||||| |||||||||| || || |||||| | |||||||||||||| || ||||||||    
T  29290885 aattcattgaataacttatgtatttagtctataatatagatcagatacatcagttgttcaatgaatc 29290819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 19674624 - 19674677
Alignment:
Q  66 ttcagtgaataatttatgtatttggtttacaatataaaccagatacatcagtta 119  Q
    |||| |||||||||  |||||||||| || ||||||| ||||||||||||||||    
T  19674624 ttcattgaataattgttgtatttggtctataatataacccagatacatcagtta 19674677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 32711245 - 32711309
Alignment:
Q  66 ttcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatc 130  Q
    |||| ||||||||| ||||||||||  || | |||| ||||||||||||| ||||| ||||||||    
T  32711245 ttcattgaataattgatgtatttggcctatattatagaccagatacatcaattattcaatgaatc 32711309  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 66055 - 65970
Alignment:
Q  66 ttcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaaaacaatttgtttttta 152  Q
    |||| ||||||||||||||||| |||||| |||||| || |||||||| | || || ||||||||  ||||| ||| ||||||||||    
T  66055 ttcattgaataatttatgtattcggtttaaaatatagactagatacatgaatttttcaatgaatctaaaaaatcaa-ttgtttttta 65970  T

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Target: chr5 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 12569245 - 12569172
Alignment:
Q  63 aaattcagtgaataatttatgtatttggtttacaatataaaccagatacatcagttatttaatgaatcagaaaa 136  Q
    ||||||| ||||||||| |||||||||| ||| | |||| ||  ||||||||||||||  |||||||| |||||    
T  12569245 aaattcaatgaataattgatgtatttgggttatagtatagactggatacatcagttataaaatgaatctgaaaa 12569172  T

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