View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_10 (Length: 497)
Name: NF2495_high_10
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 25 - 481
Target Start/End: Original strand, 6035160 - 6035617
Alignment:
| Q |
25 |
taggatatttggatataaaagtgacttgaacaagaaatttgattgagaaaattatattttgaatcaaaaactataaaccatagttttaaattagaatgat |
124 |
Q |
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| T |
6035160 |
taggatatttggatataaaagtgacttgaacaagaaatttgattgagaaaattatattttgaatcaaaaactataaaccatagttttaaattagaatgat |
6035259 |
T |
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| Q |
125 |
tcagtagagaaaaaagataattaattttatcatccgaacatattaaaaccaattatatatactccacaatcagttgtgacacatccaaaatgaaaccaaa |
224 |
Q |
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| T |
6035260 |
tcagtatcaaaaaaagataattaattttatcatccgaacatattaaaaccaattatatatactccacaatcagttgtgacacatccaaaatgaaaccaaa |
6035359 |
T |
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| Q |
225 |
tataaactaaacccgttactttggtccatcatcactaatatatttccattata-tcataattacaaaataatcaaacgacgaacaaataaaatagggnnn |
323 |
Q |
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| T |
6035360 |
tataaactaaacccgttactttggtccatcatcactaatatatttccattatattcataattacaaaataatcaaacgacgaacaaataaaatagggaaa |
6035459 |
T |
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| Q |
324 |
nnnnntaattttacaggaagtgcattttcttgtggagcatgcaaccaaacatctttctcccatgaattctatgttttccattttcatgcaaaacaattaa |
423 |
Q |
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|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6035460 |
aaaaataatttgacaggaagtacattttcttgtggagcatgcaaccaaacatctttctcccatgaattctatgttttccattttcatgcaaaacaattaa |
6035559 |
T |
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| Q |
424 |
gttgggcatgtgatgatcccttaaaacaaaacagaaatattagttaggttttgggtac |
481 |
Q |
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| T |
6035560 |
gttgggcatgtgatgatcccttaaaacaaaacagaaatagtagttaggttttgggtac |
6035617 |
T |
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