View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_106 (Length: 238)
Name: NF2495_high_106
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_106 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 40506868 - 40507094
Alignment:
| Q |
1 |
ctaaattattcccgctcattcccgtttagaggaaaccacattttcaaaaaacaatccgcaattcttcttcttcttcctgcgnnnnnnnnnnntgcacata |
100 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
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| T |
40506868 |
ctaaattattcccgctcattcccgtttagaagaaaccacattttcaaaaaacaatccgcaattcttcttcttcttccggcg--aaaaaaaaatgcacata |
40506965 |
T |
|
| Q |
101 |
cgccgtctcagactcgacgacgacgatgaagccgccgtcatcgcc---------gccgtcgaagctcatcctctaccacaacctcaaatagttccctcgg |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
40506966 |
cgccgtctcagactcgacgacgacgatgaagccgccgtcatcgccgccgtcgaagccgtcgaagctcaacctctaccacaacctcaaatagttccctcgg |
40507065 |
T |
|
| Q |
192 |
aaccagtcgtactctccgacgatgacgtc |
220 |
Q |
| |
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||||||||||||||||||||||||||||| |
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| T |
40507066 |
aaccagtcgtactctccgacgatgacgtc |
40507094 |
T |
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