View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_107 (Length: 237)
Name: NF2495_high_107
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_107 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 40902032 - 40901812
Alignment:
| Q |
1 |
ctttgagaattaagagtgtagaaatattggtttgataaaaagatagggtccacttcaggttagtactactatcactaccttcatcaaaatattctcccat |
100 |
Q |
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| T |
40902032 |
ctttgagaattaagagtgtagaaatattggtttgataaaaagatagggtctacttcaggttagtactactatcactgccttcatcaaaatattctcccat |
40901933 |
T |
|
| Q |
101 |
gctcttgaaactttgttgatattatttgtttgaatttttaaaaaacaatgggtttaaataaactttcttccaaagttttaagtatcggtcgccgcggtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
40901932 |
gctcttgaaactttgttgatattatttgtttgaatttttaaaaaacaatgggtttaaataaactttcttccaaagttttaagtatcagtcgccgcggtgt |
40901833 |
T |
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| Q |
201 |
caattaatcggtcatactatt |
221 |
Q |
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|||||||||||||| ||||| |
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| T |
40901832 |
gaattaatcggtcatgctatt |
40901812 |
T |
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