View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2495_high_121 (Length: 223)
Name: NF2495_high_121
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_121 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 206
Target Start/End: Complemental strand, 10462097 - 10461905
Alignment:
| Q |
14 |
cacagaaaacataatattgtagttgtctaggatctcttgcttactcatccaaatcacttatctgctgatttgtttgttaccagcacatggataatgcata |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10462097 |
cacagaaaacataatattgtagttgtctaggatctcttgcttactcatccaaatcacttatctgctgatttgtttgttaccagcacatggataatgcata |
10461998 |
T |
|
| Q |
114 |
tcctggctccaatatcttggtcgtgacattgactaatggggaatcaaaacgtgtggaagctcagaccaatgaagagactttgagagaagctat |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10461997 |
tcctggctccaatatcttggtcgtgacattgactaatggggaatcaaaacgtgtggaagctcagaccaatgaagagactttgagagaagctat |
10461905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University