View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_20 (Length: 438)
Name: NF2495_high_20
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 19 - 426
Target Start/End: Original strand, 47836902 - 47837306
Alignment:
| Q |
19 |
aacatcacaactatttctcaatcatcctcatgaactcaaatctaaatctctgtttatgatcagaatcttctttatattgcaataaaaatgtggcaaattt |
118 |
Q |
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| T |
47836902 |
aacatcacaactatttctcaatcatcctcatgaactcaaatctaaatcgctgtttatgatcagaatcttctttatattgcaataaaaatgtggcaaattt |
47837001 |
T |
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| Q |
119 |
gatcaacattgggggctgcattgtgattatattaaaatcattcattattgcactaaaaa-aataattaagggttatgttttttcttttactaagggggtg |
217 |
Q |
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| T |
47837002 |
gatcaacattgggggctgcattgtgattatattaaaatcattcgttattgcactaaaaataataattaagggttatgttttttcttttactaagggggtg |
47837101 |
T |
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| Q |
218 |
annnnnnnnnnnnattgaaatttataatacacataacattcatgcgacatgcatgcacttgaataatctttctcattaatttgttcttgttgaaatacat |
317 |
Q |
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| T |
47837102 |
a----ttttttttattgaaatttataatacacataacattcatgcgacatgcatgcacttgaataatttttctcattaatttgttcttattgaaatacat |
47837197 |
T |
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| Q |
318 |
gggaatgctttgtgtgttatggttgatatatatgtacttatagtggagggttttctttcttagcatccaagaacatgaattactacagaattattaggtc |
417 |
Q |
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| T |
47837198 |
gggaatgctttgtgtgttatggttgatatatatgtacttttggtggagggttttctttcttagcatccaagaacatgaattactacagaattattaggtc |
47837297 |
T |
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| Q |
418 |
gttgagtat |
426 |
Q |
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| T |
47837298 |
gttgagtat |
47837306 |
T |
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