View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_31 (Length: 383)
Name: NF2495_high_31
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_31 |
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Alignment Details
Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 13 - 368
Target Start/End: Original strand, 34333269 - 34333624
Alignment:
| Q |
13 |
tgaaggaatatggcgtgagttttccaacggaatgttgtacttgaagcacgggttcgtaaaaacaaacaaatttattagtttgtttatttcatatgaatgt |
112 |
Q |
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| T |
34333269 |
tgaaggaatatggcgtgagttttccaacggaatgttgtacttgaagcacgggttcgtaaaaacaaacaaatttattagtttgtttatttcatatgaatgt |
34333368 |
T |
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| Q |
113 |
tttcaaataaatacttaatttgacatatcttttaattttgtaagnnnnnnnnttggtttgatttgggtctgatgtagactaaatagtaggatcatattcg |
212 |
Q |
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| T |
34333369 |
tttcaaataaatacttaatttgacatatcttttaattttgtaagaaaaaaaattggtttgatttgggtctgatgtagactaaatcgtaggatcatattcg |
34333468 |
T |
|
| Q |
213 |
ttggtttattctcacccttactttcatgtactttgaaatttaactcaataagtgattgatgagttagagtggtacatttgatgtatgtgtaaattgattt |
312 |
Q |
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| T |
34333469 |
ttggtttattctcacccttactttcatgtactttgaaatttaactcaataagtgattgttgagttagagtggtacatttgatgtatgtgtaaattgattt |
34333568 |
T |
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| Q |
313 |
tgaaagaatattctcgtatatacatttgaggtgtcaaggtaacttggtggaaaagt |
368 |
Q |
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| T |
34333569 |
tgaaagaatattctcgtatatacatttgaggtgtcaaggtaacttggtggaaaagt |
34333624 |
T |
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