View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2495_high_45 (Length: 337)

Name: NF2495_high_45
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2495_high_45
NF2495_high_45
[»] chr4 (55 HSPs)
chr4 (20-322)||(37798076-37798377)
chr4 (163-305)||(37789412-37789554)
chr4 (24-80)||(28236411-28236467)
chr4 (19-73)||(48622547-48622601)
chr4 (19-81)||(50238611-50238673)
chr4 (19-81)||(50238697-50238759)
chr4 (24-81)||(40424559-40424616)
chr4 (19-80)||(52569512-52569573)
chr4 (20-80)||(12494888-12494948)
chr4 (22-80)||(436456-436514)
chr4 (24-78)||(2557670-2557724)
chr4 (19-81)||(7066495-7066557)
chr4 (19-81)||(19061931-19061993)
chr4 (23-81)||(21528516-21528574)
chr4 (19-81)||(30634102-30634164)
chr4 (19-73)||(31959818-31959872)
chr4 (19-81)||(35690495-35690557)
chr4 (19-81)||(48174089-48174151)
chr4 (20-78)||(56375515-56375573)
chr4 (20-81)||(6957823-6957884)
chr4 (20-81)||(8286664-8286725)
chr4 (19-80)||(19969405-19969466)
chr4 (24-81)||(25575053-25575110)
chr4 (27-80)||(39100533-39100586)
chr4 (24-81)||(55007975-55008032)
chr4 (33-81)||(1211388-1211436)
chr4 (33-73)||(8459058-8459098)
chr4 (33-81)||(44719357-44719405)
chr4 (33-81)||(45209201-45209249)
chr4 (33-81)||(46153946-46153994)
chr4 (33-73)||(49686931-49686971)
chr4 (33-73)||(49738554-49738594)
chr4 (28-80)||(56130403-56130455)
chr4 (19-78)||(1777016-1777075)
chr4 (19-70)||(27450187-27450238)
chr4 (33-72)||(35555655-35555694)
chr4 (22-81)||(42293261-42293320)
chr4 (19-78)||(49939733-49939792)
chr4 (15-73)||(22873603-22873661)
chr4 (19-73)||(23906301-23906355)
chr4 (19-81)||(43434148-43434210)
chr4 (37-82)||(8327143-8327188)
chr4 (24-73)||(38841608-38841657)
chr4 (36-81)||(43774098-43774143)
chr4 (19-80)||(45204837-45204898)
chr4 (49-82)||(51051450-51051483)
chr4 (24-73)||(54529647-54529696)
chr4 (24-72)||(7947166-7947214)
chr4 (33-73)||(20047672-20047712)
chr4 (33-81)||(31961262-31961310)
chr4 (19-83)||(32479262-32479326)
chr4 (45-81)||(35585855-35585891)
chr4 (33-81)||(42285699-42285747)
chr4 (24-72)||(50862860-50862908)
chr4 (25-73)||(53517735-53517783)
[»] chr8 (38 HSPs)
chr8 (20-81)||(32569706-32569767)
chr8 (15-78)||(25473402-25473465)
chr8 (19-81)||(14742078-14742140)
chr8 (22-80)||(39702181-39702239)
chr8 (19-80)||(11523720-11523781)
chr8 (20-80)||(36545374-36545434)
chr8 (33-79)||(31309591-31309637)
chr8 (19-81)||(42854000-42854062)
chr8 (19-81)||(44047528-44047590)
chr8 (24-81)||(32931189-32931246)
chr8 (33-78)||(39953263-39953308)
chr8 (33-81)||(1064958-1065006)
chr8 (19-79)||(1928585-1928645)
chr8 (33-73)||(18473976-18474016)
chr8 (29-80)||(30198263-30198314)
chr8 (33-80)||(30559936-30559983)
chr8 (22-73)||(44529452-44529503)
chr8 (19-78)||(45041315-45041374)
chr8 (24-83)||(45419464-45419523)
chr8 (19-81)||(490559-490621)
chr8 (21-79)||(10668495-10668553)
chr8 (19-73)||(12491142-12491196)
chr8 (40-82)||(16008390-16008432)
chr8 (21-79)||(23492260-23492318)
chr8 (19-81)||(42469723-42469785)
chr8 (34-80)||(42584597-42584643)
chr8 (24-81)||(40982892-40982949)
chr8 (36-81)||(41031416-41031461)
chr8 (36-81)||(41031522-41031567)
chr8 (33-73)||(5205413-5205453)
chr8 (29-81)||(5266178-5266230)
chr8 (20-80)||(15215409-15215469)
chr8 (35-71)||(18741872-18741908)
chr8 (35-71)||(18746836-18746872)
chr8 (33-81)||(21121383-21121431)
chr8 (35-79)||(35324013-35324057)
chr8 (19-79)||(36565239-36565299)
chr8 (49-81)||(39947102-39947134)
[»] scaffold0041 (1 HSPs)
scaffold0041 (19-73)||(16802-16856)
[»] chr7 (54 HSPs)
chr7 (19-81)||(32631788-32631850)
chr7 (19-78)||(21078141-21078200)
chr7 (19-81)||(12841271-12841333)
chr7 (19-81)||(28208324-28208386)
chr7 (19-81)||(29650608-29650670)
chr7 (19-81)||(31682598-31682660)
chr7 (19-81)||(39906368-39906430)
chr7 (19-80)||(11594184-11594245)
chr7 (21-81)||(31005431-31005491)
chr7 (19-78)||(31869101-31869160)
chr7 (24-78)||(1011275-1011329)
chr7 (19-73)||(6375092-6375146)
chr7 (22-80)||(24598185-24598242)
chr7 (19-85)||(27649004-27649070)
chr7 (15-81)||(33349802-33349868)
chr7 (21-79)||(37618171-37618229)
chr7 (19-81)||(38607216-38607278)
chr7 (19-81)||(38900181-38900242)
chr7 (19-81)||(40630658-40630720)
chr7 (19-80)||(5418298-5418359)
chr7 (24-73)||(40149017-40149066)
chr7 (19-80)||(43281898-43281959)
chr7 (24-81)||(43491537-43491594)
chr7 (19-80)||(45836479-45836540)
chr7 (24-80)||(2885719-2885775)
chr7 (49-89)||(6807745-6807785)
chr7 (33-81)||(14593990-14594038)
chr7 (33-81)||(16013513-16013561)
chr7 (19-79)||(17907722-17907782)
chr7 (33-81)||(44855170-44855218)
chr7 (19-70)||(35906208-35906259)
chr7 (34-73)||(38103619-38103658)
chr7 (33-83)||(21244277-21244327)
chr7 (19-81)||(22349844-22349906)
chr7 (19-73)||(28627937-28627991)
chr7 (19-73)||(34035158-34035212)
chr7 (19-73)||(34869644-34869698)
chr7 (19-81)||(36652216-36652278)
chr7 (19-73)||(40979932-40979986)
chr7 (33-79)||(41483725-41483771)
chr7 (34-80)||(48515514-48515560)
chr7 (24-73)||(6263488-6263537)
chr7 (19-80)||(28708605-28708666)
chr7 (15-80)||(29318792-29318857)
chr7 (29-82)||(30199962-30200015)
chr7 (19-80)||(42187665-42187726)
chr7 (24-81)||(42969927-42969984)
chr7 (33-81)||(4604785-4604833)
chr7 (33-81)||(12966254-12966302)
chr7 (20-72)||(33073154-33073206)
chr7 (33-73)||(34745985-34746025)
chr7 (33-81)||(36869233-36869281)
chr7 (33-81)||(45840992-45841040)
chr7 (34-78)||(47652786-47652830)
[»] chr3 (33 HSPs)
chr3 (19-81)||(53262365-53262427)
chr3 (19-81)||(22296-22358)
chr3 (19-81)||(5169056-5169118)
chr3 (19-81)||(12096701-12096763)
chr3 (24-81)||(52927844-52927901)
chr3 (19-82)||(45834595-45834658)
chr3 (20-83)||(53519805-53519868)
chr3 (19-81)||(311305-311367)
chr3 (31-81)||(4660163-4660213)
chr3 (19-81)||(7895876-7895938)
chr3 (19-81)||(45374473-45374535)
chr3 (19-81)||(47555328-47555390)
chr3 (19-81)||(48508459-48508521)
chr3 (19-72)||(6988126-6988179)
chr3 (24-81)||(31146928-31146985)
chr3 (19-80)||(51447714-51447775)
chr3 (33-73)||(14415264-14415304)
chr3 (21-73)||(31566165-31566217)
chr3 (20-80)||(43694768-43694828)
chr3 (33-80)||(48532196-48532243)
chr3 (24-79)||(52139029-52139084)
chr3 (33-79)||(35032764-35032810)
chr3 (19-73)||(38060938-38060992)
chr3 (19-81)||(40273201-40273263)
chr3 (19-73)||(41529985-41530039)
chr3 (19-73)||(47233600-47233654)
chr3 (33-78)||(39512781-39512826)
chr3 (40-81)||(49179621-49179662)
chr3 (19-80)||(49503565-49503626)
chr3 (19-80)||(52156081-52156142)
chr3 (33-81)||(3987572-3987620)
chr3 (9-73)||(21862745-21862809)
chr3 (34-78)||(37083291-37083335)
[»] chr2 (41 HSPs)
chr2 (29-73)||(16113678-16113722)
chr2 (19-81)||(227413-227475)
chr2 (19-81)||(3635319-3635381)
chr2 (19-81)||(17670692-17670754)
chr2 (19-81)||(30306256-30306318)
chr2 (19-80)||(4807819-4807880)
chr2 (19-80)||(25834902-25834963)
chr2 (19-78)||(28508902-28508961)
chr2 (22-81)||(35643175-35643234)
chr2 (22-81)||(38328366-38328425)
chr2 (19-81)||(451644-451706)
chr2 (19-73)||(12474931-12474985)
chr2 (19-73)||(41763047-41763101)
chr2 (19-81)||(43573126-43573188)
chr2 (24-74)||(45482988-45483038)
chr2 (19-80)||(7326157-7326218)
chr2 (19-80)||(9531597-9531658)
chr2 (33-78)||(28960210-28960255)
chr2 (33-81)||(8560802-8560850)
chr2 (19-79)||(12520060-12520120)
chr2 (33-81)||(44437717-44437765)
chr2 (22-81)||(3866299-3866358)
chr2 (33-80)||(9556366-9556413)
chr2 (33-80)||(12470894-12470941)
chr2 (33-80)||(12489799-12489846)
chr2 (19-78)||(13443907-13443966)
chr2 (19-66)||(43610670-43610717)
chr2 (19-73)||(3243657-3243711)
chr2 (15-73)||(8181000-8181058)
chr2 (19-81)||(24214010-24214072)
chr2 (36-82)||(25284951-25284997)
chr2 (34-80)||(33287660-33287706)
chr2 (35-81)||(36608678-36608724)
chr2 (24-81)||(12734929-12734986)
chr2 (40-73)||(13474218-13474251)
chr2 (20-73)||(19234988-19235041)
chr2 (20-81)||(45367621-45367682)
chr2 (29-61)||(6230280-6230312)
chr2 (33-81)||(15775841-15775889)
chr2 (33-73)||(35704220-35704260)
chr2 (33-73)||(38452690-38452730)
[»] scaffold0570 (1 HSPs)
scaffold0570 (19-89)||(935-1006)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-81)||(28885-28947)
[»] chr6 (21 HSPs)
chr6 (19-81)||(3206455-3206517)
chr6 (20-73)||(1615227-1615280)
chr6 (21-81)||(28085602-28085662)
chr6 (15-79)||(30679616-30679680)
chr6 (19-82)||(34500-34563)
chr6 (19-86)||(12890799-12890866)
chr6 (19-81)||(5258144-5258206)
chr6 (20-73)||(608386-608439)
chr6 (22-73)||(9706997-9707048)
chr6 (23-81)||(20427632-20427691)
chr6 (22-73)||(34934834-34934885)
chr6 (19-81)||(579642-579704)
chr6 (19-73)||(5053750-5053804)
chr6 (19-81)||(34143761-34143823)
chr6 (19-81)||(34156377-34156439)
chr6 (15-72)||(2079501-2079558)
chr6 (20-81)||(10098892-10098953)
chr6 (20-73)||(21886329-21886382)
chr6 (19-80)||(31819055-31819116)
chr6 (24-73)||(33730194-33730243)
chr6 (24-80)||(30642998-30643054)
[»] chr5 (35 HSPs)
chr5 (19-81)||(14665936-14665998)
chr5 (19-80)||(29816606-29816667)
chr5 (19-79)||(408492-408552)
chr5 (22-81)||(4496611-4496670)
chr5 (15-78)||(18855827-18855890)
chr5 (19-81)||(2915492-2915554)
chr5 (19-73)||(3302068-3302122)
chr5 (19-81)||(10639526-10639588)
chr5 (19-81)||(12492380-12492442)
chr5 (19-73)||(16347384-16347438)
chr5 (19-81)||(28976855-28976917)
chr5 (19-81)||(30213799-30213861)
chr5 (13-70)||(38685185-38685242)
chr5 (19-79)||(13561384-13561444)
chr5 (19-78)||(1287578-1287637)
chr5 (33-80)||(28411914-28411961)
chr5 (25-79)||(11675760-11675814)
chr5 (19-73)||(20456997-20457051)
chr5 (19-81)||(32442122-32442183)
chr5 (29-83)||(43557827-43557881)
chr5 (19-72)||(218057-218110)
chr5 (33-78)||(7678715-7678760)
chr5 (24-81)||(14668000-14668057)
chr5 (24-81)||(28276467-28276524)
chr5 (33-74)||(38501421-38501462)
chr5 (16-73)||(39040977-39041034)
chr5 (24-81)||(41894302-41894359)
chr5 (19-80)||(42576234-42576295)
chr5 (20-80)||(1275489-1275549)
chr5 (33-73)||(3000977-3001017)
chr5 (33-81)||(4653490-4653538)
chr5 (19-79)||(5860058-5860118)
chr5 (19-79)||(9400735-9400795)
chr5 (33-73)||(25938207-25938247)
chr5 (48-80)||(38661415-38661447)
[»] chr1 (49 HSPs)
chr1 (23-81)||(4029350-4029408)
chr1 (19-81)||(25979227-25979289)
chr1 (19-81)||(28090690-28090752)
chr1 (19-81)||(30202126-30202188)
chr1 (19-80)||(1210969-1211030)
chr1 (22-79)||(4415576-4415633)
chr1 (20-73)||(28533692-28533745)
chr1 (24-81)||(34444585-34444642)
chr1 (40-81)||(42340099-42340140)
chr1 (19-79)||(696494-696554)
chr1 (15-79)||(9592954-9593018)
chr1 (19-79)||(29577476-29577536)
chr1 (19-78)||(8796433-8796492)
chr1 (19-81)||(4318841-4318903)
chr1 (19-81)||(26299292-26299354)
chr1 (19-81)||(41165506-41165568)
chr1 (19-73)||(49347397-49347451)
chr1 (19-81)||(51602280-51602342)
chr1 (19-73)||(52921304-52921358)
chr1 (19-72)||(6025829-6025882)
chr1 (20-81)||(15086147-15086208)
chr1 (19-80)||(19936684-19936745)
chr1 (19-80)||(37311752-37311813)
chr1 (19-80)||(41560453-41560514)
chr1 (24-81)||(43481794-43481851)
chr1 (19-80)||(44751708-44751769)
chr1 (20-80)||(22090321-22090381)
chr1 (19-79)||(34792347-34792407)
chr1 (33-81)||(38758016-38758064)
chr1 (19-79)||(44941774-44941834)
chr1 (33-80)||(4707218-4707265)
chr1 (19-78)||(32079176-32079235)
chr1 (33-80)||(38807668-38807715)
chr1 (19-78)||(51440764-51440823)
chr1 (23-81)||(3818852-3818910)
chr1 (23-73)||(4380188-4380237)
chr1 (15-81)||(8672138-8672204)
chr1 (19-73)||(37462880-37462934)
chr1 (19-73)||(46423220-46423274)
chr1 (33-71)||(49377539-49377577)
chr1 (32-81)||(7922062-7922111)
chr1 (39-80)||(11584241-11584282)
chr1 (40-81)||(41017213-41017254)
chr1 (40-81)||(49102324-49102365)
chr1 (24-73)||(52561593-52561642)
chr1 (33-81)||(2914119-2914167)
chr1 (36-80)||(3059554-3059598)
chr1 (19-71)||(38877349-38877401)
chr1 (16-60)||(45510850-45510894)
[»] scaffold0157 (1 HSPs)
scaffold0157 (20-80)||(25529-25589)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-81)||(31694-31754)
[»] scaffold1318 (1 HSPs)
scaffold1318 (19-78)||(555-614)
[»] scaffold0006 (1 HSPs)
scaffold0006 (36-81)||(163190-163235)
[»] scaffold0491 (1 HSPs)
scaffold0491 (35-71)||(3677-3713)
[»] scaffold0022 (1 HSPs)
scaffold0022 (33-81)||(99282-99330)


Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 322
Target Start/End: Original strand, 37798076 - 37798377
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttgaaataatgtatgtttttattttatcttttgtaaag 119  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37798076 cgtcatttgatcaatgtagccgactccatttagtgggataaggcttggttattgttgttgttttgaaataatgtatgtttttattttatcttttgtaaag 37798175  T
Q  120 acaggaatgtatctttactctcaattaaaatgctcatatactagtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgct 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37798176 acaggaatgtatcttcactctcaattaaaatgctcatatactagtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgct 37798275  T
Q  220 ttaacctcagcaacatttatgctagctatgttcaaccttactccaggcattaccttcatcatggcaatattatttgggtactcactctatactcgttata 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37798276 ttaacctcagcaacatttatgctagctatgttcaaccttactccaggcattaccttcatcatggcaatattatttgggtactcactc-atactcgttata 37798374  T
Q  320 cct 322  Q
    |||    
T  37798375 cct 37798377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 305
Target Start/End: Original strand, 37789412 - 37789554
Alignment:
Q  163 gtcacgtaatatttcaggggaagtttatttataaacctttatgccgagggtattgctttaacctcagcaacatttatgctagctatgttcaaccttactc 262  Q
    |||| ||| |||| |||||||||||||||||| ||  | | |||||| || ||  ||||||||||| ||||||||||| | |||||||||||||||||||    
T  37789412 gtcatgtattattccaggggaagtttatttatgaatatgtttgccgaaggcatgactttaacctcatcaacatttatgttcgctatgttcaaccttactc 37789511  T
Q  263 caggcattaccttcatcatggcaatattatttgggtactcact 305  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  37789512 caggcattaccttcatcatggcaatattcttcgggtactcact 37789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 28236411 - 28236467
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  28236411 atttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgttgt 28236467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 48622601 - 48622547
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  48622601 gcgtcatttaatccatgtagccgaccccacttagtgggataaggcttggttgttg 48622547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 50238673 - 50238611
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  50238673 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 50238611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 50238759 - 50238697
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  50238759 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 50238697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 40424559 - 40424616
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||||| ||||  |||||||| ||||||||||||||||||| |||||||    
T  40424559 atttaatctatgtagtcgacctcatttagtaggataagacttggttgttgttgttgtt 40424616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 52569573 - 52569512
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  52569573 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 52569512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 12494888 - 12494948
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| ||||||    
T  12494888 cgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgttgt 12494948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 436456 - 436514
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  436456 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 436514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 2557724 - 2557670
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||| ||| |||||||| |||||||||||||||||||| ||||||||||| ||||    
T  2557724 atttgatccatgtagccaactccatttagtgggataaggcttggttgttgttgtt 2557670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 7066557 - 7066495
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||  ||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  7066557 gcgtcatttgattcatgtagctgaccccatttagtgggataaggcttggttgttgttgttgtt 7066495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 19061993 - 19061931
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| |||  |||||||||||| ||||||||||| |||||||    
T  19061993 gcgtcatttgatccatgtagccgaccccacctagtgggataaggcttggttgttgttgttgtt 19061931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 21528516 - 21528574
Alignment:
Q  23 catttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  21528516 catttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 21528574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 30634164 - 30634102
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30634164 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30634102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 31959872 - 31959818
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  31959872 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 31959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 35690495 - 35690557
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  35690495 gcgtaatttgatccatgtagccgaccccacttagtgggataagacttggtttttgttgttgtt 35690557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 48174151 - 48174089
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  48174151 gcgtcatttgatccatgtagcagaccccacttagtgggataaggcttggttgttgttgttgtt 48174089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 56375515 - 56375573
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||||| ||| |||||||||||  || ||||||||||||||||||||||||| ||||    
T  56375515 cgtcatttgatccatgtagccgacctcacttagtgggataagacttggttgttgttgtt 56375573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 6957823 - 6957884
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| ||||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  6957823 cgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgttgttgttgtt 6957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 8286664 - 8286725
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| ||||||||| | ||| ||||||||||||| ||||||||||| |||||||    
T  8286664 cgtcatttgatccatgtagccgcccccacttagtgggataaggcttggttgttgttgttgtt 8286725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19969405 - 19969466
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||||    
T  19969405 gcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 19969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 25575053 - 25575110
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||| ||| ||||||||||||||||| ||||||||||| |||||||    
T  25575053 atttgatccatgtagcagaccccatttagtgggataaggcttggttgttgttgttgtt 25575110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 39100586 - 39100533
Alignment:
Q  27 taatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  39100586 taatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 39100533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 55007975 - 55008032
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  55007975 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 55008032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 1211436 - 1211388
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||    
T  1211436 atgtagccgaccccacttaatgggataagacttggttgttgttgttgtt 1211388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 8459098 - 8459058
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  8459098 atgtagccaaccccatttagtgggataagacttggttgttg 8459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 44719405 - 44719357
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  44719405 atgtagccgaccctacttagtgggataagacttggttgttgttgttgtt 44719357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 45209249 - 45209201
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  45209249 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 45209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 46153946 - 46153994
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  46153946 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 46153994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 49686931 - 49686971
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  49686931 atgtagccgaccccacttagtgggataagacttggttgttg 49686971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 49738594 - 49738554
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  49738594 atgtagccgaccccatttagtgggataaggcttggttgttg 49738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 56130403 - 56130455
Alignment:
Q  28 aatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  56130403 aatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 56130455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1777075 - 1777016
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| ||| ||||||||| ||||||||||| ||||    
T  1777075 gcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgtt 1777016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 27450238 - 27450187
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttg 70  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||    
T  27450238 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 27450187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 35555694 - 35555655
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgtt 72  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  35555694 atgtagccgactccatttagtgggacaaggcttggttgtt 35555655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 42293320 - 42293261
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||||||||||| | ||| ||||||| ||||| | ||||||||| |||||||    
T  42293320 tcatttaatctatgtagccggccccacttagtggaataaggcctggttgttgttgttgtt 42293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 49939792 - 49939733
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||    
T  49939792 gcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgtt 49939733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 22873661 - 22873603
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||| |||||||| |||||||| || ||||||||||||||||| |||||| ||||    
T  22873661 tataacgtaatttaatccatgtagccaaccccatttagtgggataaggcttggtagttg 22873603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 23906355 - 23906301
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||| ||| ||| ||||||||||||| |||||||||||    
T  23906355 gcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttg 23906301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 43434148 - 43434210
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||| |||  ||| ||||||||||||| ||||||||||| |||||||    
T  43434148 gcgtcatttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgttgttgtt 43434210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 82
Target Start/End: Original strand, 8327143 - 8327188
Alignment:
Q  37 agccgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    ||||||| ||| ||||||||||||| ||||||||||| ||||||||    
T  8327143 agccgaccccacttagtgggataaggcttggttgttgttgttgttt 8327188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 38841657 - 38841608
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||||||||| |||||| ||||||||||||||| ||||| ||||||    
T  38841657 atttgatctatgtaaccgacttcatttagtgggataaaacttgattgttg 38841608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 43774098 - 43774143
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||||||||||||||||| |||| |||||| |||||||    
T  43774098 tagccgaccccatttagtgggataaggcttgattgttgttgttgtt 43774143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45204898 - 45204837
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| |||||||||||| || | | ||||||||||||| ||||||||||| ||||||    
T  45204898 gcgtaatttgatctatgtagcccacccaacttagtgggataaggcttggttgttgttgttgt 45204837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Complemental strand, 51051483 - 51051450
Alignment:
Q  49 ttagtgggataagacttggttgttgatgttgttt 82  Q
    ||||||||||||||||||||||||| ||||||||    
T  51051483 ttagtgggataagacttggttgttgttgttgttt 51051450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 54529647 - 54529696
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||| |||||||||   |||||||||||||||||||||||||||||    
T  54529647 atttgatccatgtagccggacccatttagtgggataagacttggttgttg 54529696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 7947166 - 7947214
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  7947166 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 7947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 20047672 - 20047712
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| | ||| |||||||||||||||||||||||||    
T  20047672 atgtagccggccccacttagtgggataagacttggttgttg 20047712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 31961310 - 31961262
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||  || ||||||||||||| ||||||||||| |||||||    
T  31961310 atgtagccgacctcacttagtgggataaggcttggttgttgttgttgtt 31961262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 32479262 - 32479326
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 83  Q
    ||||||||| ||| ||||||||||| ||| ||||||| | ||| ||||||||||| |||| ||||    
T  32479262 gcgtcatttgatccatgtagccgaccccacttagtggaaaaaggcttggttgttgttgttctttt 32479326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 35585855 - 35585891
Alignment:
Q  45 ccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  35585855 ccatttagtgggataaggcttggttgttgttgttgtt 35585891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 42285747 - 42285699
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| || ||| ||||| ||||||||||||||||||| |||||||    
T  42285747 atgtagccaaccccacttagttggataagacttggttgttgttgttgtt 42285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 50862860 - 50862908
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||    
T  50862860 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 50862908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 53517735 - 53517783
Alignment:
Q  25 tttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||| ||||||||||| | | ||||||| |||||||||||||||||    
T  53517735 tttaatccatgtagccgaccctacttagtggaataagacttggttgttg 53517783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 32569767 - 32569706
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  32569767 cgtcatttgatttatgtagccgaccccatttagtgggataagacttggttgttgttgttgtt 32569706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 25473465 - 25473402
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  25473465 tatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 25473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 14742140 - 14742078
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14742140 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 39702181 - 39702239
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  39702181 tcatttgatctatgtagccgaccacatttagtgggataaaacttggttgttgatattgt 39702239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 11523781 - 11523720
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  11523781 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 11523720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 36545374 - 36545434
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  36545374 cgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 36545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 31309591 - 31309637
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  31309591 atgtagccgacaccacttagtgggataagacttggttgttgttgttg 31309637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 42854062 - 42854000
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||  ||||| |||| |||||||    
T  42854062 gcgtcatttgatccatgtagccgaccccatttagtgggataaggtttggtggttgttgttgtt 42854000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 44047590 - 44047528
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  44047590 gcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgtt 44047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 32931189 - 32931246
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||| ||| |||||||||||||||||||    
T  32931189 atttgatccatgtagccgaccccacttagtgggaaaagccttggttgttgatgttgtt 32931246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 39953308 - 39953263
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  39953308 atgtagccgaccccacttagtgggataagacttggttgttgttgtt 39953263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 1064958 - 1065006
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  1064958 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 1065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 1928645 - 1928585
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  1928645 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 1928585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 18474016 - 18473976
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  18474016 atgtagccgacaccacttagtgggataagacttggttgttg 18473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 30198314 - 30198263
Alignment:
Q  29 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| |||||| ||| ||||||||||||| ||||||||||| ||||||    
T  30198314 atctatgttgccgaccccacttagtgggataaggcttggttgttgttgttgt 30198263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 30559936 - 30559983
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  30559936 atgtagccgaccccagttagtgggataaggcttggttgttgttgttgt 30559983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 44529452 - 44529503
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  44529452 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 44529503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 45041374 - 45041315
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||| |||| ||| ||||||| ||| ||| ||||||||||||| ||||||||||||||||    
T  45041374 gcgtaatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgatgtt 45041315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 45419464 - 45419523
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 83  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||| |||||    
T  45419464 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtagtttt 45419523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 490559 - 490621
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| |||| |||||| |||||||    
T  490559 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgttgtt 490621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 10668553 - 10668495
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||| ||| |||||||||||  || ||||||||||||| ||||||||||| |||||    
T  10668553 gtcatttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgttgttg 10668495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12491196 - 12491142
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||| |||||||    
T  12491196 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttagttgttg 12491142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 16008432 - 16008390
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||    
T  16008432 cgaccccacttagtgggataagacttggttgttgttgttgttt 16008390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 23492260 - 23492318
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||||| ||||||||||| ||| |||||| |||||| |||| |||||| |||||    
T  23492260 gtcatttaatccatgtagccgaccccacttagtgagataaggcttgtttgttgttgttg 23492318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 42469785 - 42469723
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||| ||| ||| ||| ||||||||| ||||||||||| |||||||    
T  42469785 gcgtcatttgatccatgtagctgaccccacttattgggataaggcttggttgttgttgttgtt 42469723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 42584597 - 42584643
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||| ||| |||||||||||||||||| |||||| ||||||    
T  42584597 tgtagccgaccccacttagtgggataagacttgattgttgttgttgt 42584643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 40982949 - 40982892
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| |||| |||||| ||||||||||||| ||| ||||||||||| |||||||    
T  40982949 atttgatccatgttgccgaccccatttagtgggaaaaggcttggttgttgttgttgtt 40982892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 41031461 - 41031416
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  41031461 tagccgaccccacttagtgggataaggcttggttgttgttgttgtt 41031416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 41031567 - 41031522
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  41031567 tagccgaccccacttagtgggataaggcttggttgttgttgttgtt 41031522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 5205413 - 5205453
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||| |||| ||| |||||||||||||||||||||||||    
T  5205413 atgtaggcgaccccacttagtgggataagacttggttgttg 5205453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 5266178 - 5266230
Alignment:
Q  29 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||||||| |||||||||||||||   ||| |||||| |||||||    
T  5266178 atctatgtagccgactgcatttagtgggataaactttgattgttgttgttgtt 5266230  T

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Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 15215469 - 15215409
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||| | ||| ||||||||||| ||| ||||| ||||||| ||||||||||| ||||||    
T  15215469 cgtcatatgatccatgtagccgaccccacttagtaggataaggcttggttgttgttgttgt 15215409  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 18741872 - 18741908
Alignment:
Q  35 gtagccgactccatttagtgggataagacttggttgt 71  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  18741872 gtagccgaccccacttagtgggataagacttggttgt 18741908  T

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Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 18746836 - 18746872
Alignment:
Q  35 gtagccgactccatttagtgggataagacttggttgt 71  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  18746836 gtagccgaccccacttagtgggataagacttggttgt 18746872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21121383 - 21121431
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  21121383 atgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 21121431  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 35324013 - 35324057
Alignment:
Q  35 gtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  35324013 gtagccgaccccacttagtgggataaggcttggttgttgttgttg 35324057  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 36565299 - 36565239
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| || |||||||| |||||    
T  36565299 gcgttatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttg 36565239  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 81
Target Start/End: Original strand, 39947102 - 39947134
Alignment:
Q  49 ttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||||||||||||||| |||||||    
T  39947102 ttagtgggataagacttggttgttgttgttgtt 39947134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 16802 - 16856
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  16802 gcgtcatttgatctatgtagccgactccacttagtgggataaggcttggttgttg 16856  T

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Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 32631788 - 32631850
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  32631788 gcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 32631850  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 21078141 - 21078200
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| |||||||||||| |||||||||||||||| ||||||||||| ||||    
T  21078141 gcgtcatttgatccatgtagccgacttcatttagtgggataaggcttggttgttgttgtt 21078200  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12841333 - 12841271
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12841333 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12841271  T

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Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 28208386 - 28208324
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28208386 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28208324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 29650608 - 29650670
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  29650608 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 29650670  T

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Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 31682660 - 31682598
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31682660 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31682598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 39906430 - 39906368
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  39906430 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 39906368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 11594184 - 11594245
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  11594184 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 11594245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 31005431 - 31005491
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31005431 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31005491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 31869160 - 31869101
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  31869160 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 31869101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 1011275 - 1011329
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  1011275 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 1011329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 6375092 - 6375146
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  6375092 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 6375146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 24598242 - 24598185
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||    
T  24598242 tcatttgatccatgtagccgactc-atttaatgggataagacttggttgttgttgttgt 24598185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 27649004 - 27649070
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttga 85  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||| ||||||    
T  27649004 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtttttttga 27649070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 33349868 - 33349802
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||| ||| |||||||||||  || ||| ||||||||| ||||||||||| |||||||    
T  33349868 tatagcgtcatttgatccatgtagccgacctcacttaatgggataaggcttggttgttgttgttgtt 33349802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 37618171 - 37618229
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  37618171 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 37618229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 38607216 - 38607278
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||| ||| ||||||||||||||| |||||||| |||| ||||||||||| |||||||    
T  38607216 gcgtcgtttgatccatgtagccgactccacttagtgggttaaggcttggttgttgttgttgtt 38607278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 38900181 - 38900242
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38900181 gcgtcatttgatccatgtagccgac-ccacttagtgggataaggcttggttgttgttgttgtt 38900242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 40630658 - 40630720
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  40630658 gcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 40630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5418298 - 5418359
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| |||||| |||| ||||||||||||||||| ||||||||||| ||||||    
T  5418298 gcgtaatttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgttgttgt 5418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 40149066 - 40149017
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||||||||||||| |||| ||||||||||||| |||||||||||    
T  40149066 atttgatctatgtagccgaatccacttagtgggataaggcttggttgttg 40149017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 43281898 - 43281959
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| ||||||    
T  43281898 gcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgt 43281959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 43491537 - 43491594
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43491537 atttcatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43491594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 45836540 - 45836479
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||||    
T  45836540 gcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 45836479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 2885775 - 2885719
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  2885775 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 2885719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 89
Target Start/End: Original strand, 6807745 - 6807785
Alignment:
Q  49 ttagtgggataagacttggttgttgatgttgttttgaaata 89  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  6807745 ttagtgggataagatttggttgttgttgttgttttgaaata 6807785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14593990 - 14594038
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14593990 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14594038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 16013513 - 16013561
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  16013513 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 16013561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 17907782 - 17907722
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||| ||||||||||| ||||||||  ||||||||||||||||||| |||||    
T  17907782 gcgtaatttgatccatgtagccgaccccatttagcaggataagacttggttgttgttgttg 17907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 44855218 - 44855170
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  44855218 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 44855170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 35906259 - 35906208
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttg 70  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||    
T  35906259 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 35906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 38103658 - 38103619
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  38103658 tgtagccgaccccagttagtgggataagacttggttgttg 38103619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 21244327 - 21244277
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 83  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||| ||||    
T  21244327 atgtagccgaccccacttagtgggataaggcttggttgttgttgttttttt 21244277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 22349844 - 22349906
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||| |||| ||| ||||||||||||| |||| |||||| |||||||    
T  22349844 gcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgttgttgtt 22349906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 28627991 - 28627937
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||| ||| ||||||||||||||| ||||||||||||| ||| |||||||    
T  28627991 gcgtaatttgatccatgtagccgactccacttagtgggataaggcttagttgttg 28627937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34035212 - 34035158
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| |||||||||| || |||||||||||    
T  34035212 gcgtcatttgatccatgtagccgaccccacttagtgggattaggcttggttgttg 34035158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 34869644 - 34869698
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| | | ||||||||||||| |||||||||||    
T  34869644 gcgtcatttgatccatgtagccgaccctaattagtgggataaggcttggttgttg 34869698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 36652216 - 36652278
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| || ||||| || |||||||    
T  36652216 gcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgctgttgttgtt 36652278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40979986 - 40979932
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  40979986 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 40979932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 41483725 - 41483771
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||||| ||| |||||||||||||| |||||||||| |||||    
T  41483725 atgtagccgaccccacttagtgggataagatttggttgttgttgttg 41483771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 48515514 - 48515560
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||| ||| ||||||||||||||||||||| ||| ||||||    
T  48515514 tgtagccgaccccacttagtgggataagacttggtttttgttgttgt 48515560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 6263488 - 6263537
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  6263488 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 6263537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 28708605 - 28708666
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| |||||||| || ||||||    
T  28708605 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgatgttgttgt 28708666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 29318857 - 29318792
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| |||| ||| ||||||||||| |   ||||||||||||| ||||||||||| ||||||    
T  29318857 tatagcgtaatttgatccatgtagccgacccagcttagtgggataaggcttggttgttgttgttgt 29318792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 30200015 - 30199962
Alignment:
Q  29 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    ||||||||||||| | ||  ||||||||||||| ||||||||||| ||||||||    
T  30200015 atctatgtagccggccccgcttagtgggataaggcttggttgttgttgttgttt 30199962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 42187665 - 42187726
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||| ||||||| ||||||    
T  42187665 gcgtaatttgatccatgtagccgaccccacttagtgggataaggctttgttgttgttgttgt 42187726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 42969927 - 42969984
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||| ||| |||||||||||    
T  42969927 atttgatccatgtagccgaccccacttagtgggataaggctttgttattgatgttgtt 42969984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 4604785 - 4604833
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| || ||| ||||||||||||||||||||| ||| |||||||    
T  4604785 atgtagccaaccccacttagtgggataagacttggttcttgttgttgtt 4604833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 12966254 - 12966302
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||  ||| ||||||||||||| ||||||||||| |||||||    
T  12966254 atgtagccgatcccacttagtgggataaggcttggttgttgttgttgtt 12966302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 33073154 - 33073206
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    |||||||| ||| ||||||||||  ||| ||||||||||||| ||||||||||    
T  33073154 cgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgtt 33073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 34745985 - 34746025
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  34745985 atgtagccgaccccacttagtgggataaggcttggttgttg 34746025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 36869281 - 36869233
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||| ||||||||| ||||||||||| |||||||    
T  36869281 atgtagccgaccccacttaatgggataaggcttggttgttgttgttgtt 36869233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 45841040 - 45840992
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||| ||| ||| ||||||| ||||||||||||||||| |||||||    
T  45841040 atgtagctgaccccaattagtggtataagacttggttgttgttgttgtt 45840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 47652786 - 47652830
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  47652786 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 47652830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 53262365 - 53262427
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  53262365 gcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 53262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 22296 - 22358
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||||||||||||||| ||| ||||||||||||  ||||||||||| |||||||    
T  22296 gcgtcatttgatctatgtagccgaccccacttagtgggataaagcttggttgttgttgttgtt 22358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 5169056 - 5169118
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  5169056 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 5169118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12096763 - 12096701
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12096763 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12096701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 52927901 - 52927844
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  52927901 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgatgttgtt 52927844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 45834658 - 45834595
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    ||||||||| ||| |||||||| || ||| ||||||||||||| ||||||||||| ||||||||    
T  45834658 gcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgttt 45834595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 53519805 - 53519868
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 83  Q
    |||||||| ||| ||||||||||| ||| |||||| |||||| ||||||||||| |||||||||    
T  53519805 cgtcatttgatccatgtagccgaccccacttagtgagataaggcttggttgttgttgttgtttt 53519868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 311367 - 311305
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||  ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  311367 gcgtcatttgatacatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 4660213 - 4660163
Alignment:
Q  31 ctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||    
T  4660213 ctatgtagccgactccaattagtggaataaggcttggttgttgttgttgtt 4660163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 7895938 - 7895876
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||| ||||||||| ||||||||||| |||||||    
T  7895938 gcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttgtt 7895876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 45374535 - 45374473
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| |||||||    
T  45374535 gcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgttgtt 45374473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 47555390 - 47555328
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  47555390 gcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 47555328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 48508459 - 48508521
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  48508459 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 48508521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 6988126 - 6988179
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    ||||||||| ||| |||||||||||||| |||||||||||||| ||| ||||||    
T  6988126 gcgtcatttgatcaatgtagccgactccttttagtgggataaggcttagttgtt 6988179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 31146928 - 31146985
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||||||| ||||||||||||| || |||||||| |||||||    
T  31146928 atttgatccatgtagccgactccacttagtgggataaggctcggttgttgttgttgtt 31146985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 51447775 - 51447714
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||  ||||||||| | ||||||||||||||||| ||||||||||| ||||||    
T  51447775 gcgtcatttgattcatgtagccggccccatttagtgggataaggcttggttgttgttgttgt 51447714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 14415304 - 14415264
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  14415304 atgtagccgaccccacttagtgggataagacttggttgttg 14415264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 31566217 - 31566165
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  31566217 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 31566165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 43694828 - 43694768
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| |||||||||| |||| ||||||||||||||||  || |||||||| ||||||    
T  43694828 cgtcatttgatctatgtagtcgaccccatttagtgggataaagctgggttgttgttgttgt 43694768  T

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Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 48532196 - 48532243
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  48532196 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 48532243  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 52139029 - 52139084
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  52139029 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 52139084  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 35032810 - 35032764
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  35032810 atgtagccgaccccacttagtgggataaggcttggttattgatgttg 35032764  T

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Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 38060938 - 38060992
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||| ||| ||||||||||| ||| |||||||||||||| ||||||||||    
T  38060938 gcgtaatttgatccatgtagccgaccccacttagtgggataagaattggttgttg 38060992  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 40273263 - 40273201
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| |||  |||||||||| |||||||    
T  40273263 gcgtcatttgatccatgtagccgaccccacttagtgggaaaaggtttggttgttgttgttgtt 40273201  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 41529985 - 41530039
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  41529985 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 41530039  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 47233654 - 47233600
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||  ||||||||||| ||| ||||||||||||| |||||||||||    
T  47233654 gcgtcatttgattcatgtagccgaccccagttagtgggataaggcttggttgttg 47233600  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 39512781 - 39512826
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  39512781 atgtagccgaccccacttagtgggataaggcttggttgttgttgtt 39512826  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 49179621 - 49179662
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| |||||||||||||||||||||| ||||||||||    
T  49179621 cgaccccacttagtgggataagacttggttgctgatgttgtt 49179662  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 49503626 - 49503565
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| | | ||||||||||||| ||||||||||| ||||||    
T  49503626 gcgtaatttgatccatgtagccgaccctacttagtgggataaggcttggttgttgttgttgt 49503565  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 52156142 - 52156081
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||| | ||| ||||||||||| ||| ||||||||||||| || |||||||| ||||||    
T  52156142 gcgtcatctgatccatgtagccgaccccacttagtgggataaggctcggttgttgttgttgt 52156081  T

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Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 3987572 - 3987620
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||||| ||| || |||||||||||||||||||||| |||||||    
T  3987572 atgtacccgaccccactttgtgggataagacttggttgttgttgttgtt 3987620  T

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Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 21862809 - 21862745
Alignment:
Q  9 gaagaatatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| | ||||||| ||| ||||||||||| ||| |||||| |||||| |||| ||||||    
T  21862809 gaagaatatggtgtcatttgatccatgtagccgaccccacttagtgagataaggcttgcttgttg 21862745  T

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Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 37083335 - 37083291
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  37083335 tgtagccgaccccacttagtgggataaggcttggttgttgttgtt 37083291  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 16113678 - 16113722
Alignment:
Q  29 atctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  16113678 atctatgtagccgactccatttagtgggagaagacttggttgttg 16113722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 227413 - 227475
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  227413 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 227475  T

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Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 3635381 - 3635319
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  3635381 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 3635319  T

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Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 17670692 - 17670754
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  17670692 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 17670754  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 30306256 - 30306318
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30306256 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30306318  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 4807819 - 4807880
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  4807819 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4807880  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 25834902 - 25834963
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  25834902 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 25834963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 28508902 - 28508961
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  28508902 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 28508961  T

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Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 35643175 - 35643234
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||  ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  35643175 tcatttaatacatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 35643234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 38328425 - 38328366
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38328425 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 38328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 451706 - 451644
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  451706 gcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgttgttgtt 451644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 12474985 - 12474931
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  12474985 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 12474931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 41763101 - 41763047
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  41763101 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 41763047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 43573188 - 43573126
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43573188 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43573126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 45483038 - 45482988
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttga 74  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  45483038 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttga 45482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7326218 - 7326157
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| |||||||| || ||| ||||||||||||| ||||||||||| ||||||    
T  7326218 gcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgt 7326157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 9531658 - 9531597
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  9531658 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 9531597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 28960255 - 28960210
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||    
T  28960255 atgtagtcgactccatttagtgggataaggcttggttgttgttgtt 28960210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 8560850 - 8560802
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| | | ||||||||||||||||||||||||| |||||||    
T  8560850 atgtagccgacccaacttagtgggataagacttggttgttgttgttgtt 8560802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 12520120 - 12520060
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  12520120 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 12520060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 44437765 - 44437717
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  44437765 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 44437717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 3866299 - 3866358
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||| ||| ||||||||||| ||| ||||| ||||||| ||||||||||| |||||||    
T  3866299 tcatttgatccatgtagccgaccccacttagtaggataaggcttggttgttgttgttgtt 3866358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 9556413 - 9556366
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||||||| |||||||||| || ||||||||||| ||||||    
T  9556413 atgtagccgactccacttagtgggatgaggcttggttgttgttgttgt 9556366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 12470941 - 12470894
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  12470941 atgtagccgaccccatttagtgggataaggcttggtggttgttgttgt 12470894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 12489846 - 12489799
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  12489846 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 12489799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 13443966 - 13443907
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||| ||| ||| ||| ||||    
T  13443966 gcgtcatttgatcgatgtagccgaccccatttagtgggataaggcttagttattgttgtt 13443907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 43610717 - 43610670
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttg 66  Q
    ||||| ||||||| ||||||||||| |||||| |||||||||||||||    
T  43610717 gcgtcgtttaatccatgtagccgaccccatttggtgggataagacttg 43610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 3243711 - 3243657
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| | ||||||||| ||| ||||||||||||| |||||||||||    
T  3243711 gcgtcatttgatccaggtagccgaccccacttagtgggataaggcttggttgttg 3243657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 8181000 - 8181058
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||| ||||||| ||| ||||||||||| ||| ||||||||||||| ||| |||||||    
T  8181000 tatagtgtcatttgatccatgtagccgaccccacttagtgggataaggcttcgttgttg 8181058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 24214010 - 24214072
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||||||| ||||||||||| |||  | ||||||||||| |||||||||| |||||||    
T  24214010 gcgtaatttaatccatgtagccgaccccaccttgtgggataagatttggttgttgttgttgtt 24214072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 25284997 - 25284951
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    |||||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  25284997 tagccgactccacttactgggataaggcttggttgttgttgttgttt 25284951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 33287660 - 33287706
Alignment:
Q  34 tgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||| |||||| ||||||||| ||||||||||||||| ||||||    
T  33287660 tgtagccaactccacttagtgggacaagacttggttgttgttgttgt 33287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 36608724 - 36608678
Alignment:
Q  35 gtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||||||||  |||||||||||||||||||||||| |||||||    
T  36608724 gtagtcgactccacgtagtgggataagacttggttgttgttgttgtt 36608678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 12734929 - 12734986
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| |||||| |||| ||| ||||||||||||| ||||||||||| |||||||    
T  12734929 atttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgttgttgtt 12734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 13474251 - 13474218
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| |||||||||||||||||||||||||    
T  13474251 cgactccacttagtgggataagacttggttgttg 13474218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 19235041 - 19234988
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||||||| |||||||| |||||| ||||||||||||| ||| |||||||    
T  19235041 cgtcgtttaatccatgtagccaactccacttagtgggataaggcttagttgttg 19234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 45367682 - 45367621
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| |||| |||||| ||| |||||||||||| ||||| |||||| |||||||    
T  45367682 cgtcatttgatccatgtcgccgaccccacttagtgggataaaacttgtttgttgttgttgtt 45367621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 6230312 - 6230280
Alignment:
Q  29 atctatgtagccgactccatttagtgggataag 61  Q
    |||||||||||| ||||||||||||||||||||    
T  6230312 atctatgtagcctactccatttagtgggataag 6230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 15775889 - 15775841
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||| ||||| ||||||||||| |||||||    
T  15775889 atgtagccgaccccacttagtggaataaggcttggttgttgttgttgtt 15775841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 35704260 - 35704220
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  35704260 atgtagccgacatcatttagtgggataagacttgattgttg 35704220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 38452730 - 38452690
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  38452730 atgtagccgaccccacttagtgggataaggcttggttgttg 38452690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 1006 - 935
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt-ttgaaata 89  Q
    ||||||||| ||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  1006 gcgtcatttgatccatgtagctgaccccatttagtgggataaggcttggttgttgttgttgttattgaaata 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 28947 - 28885
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28947 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 3206517 - 3206455
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||||||||||| ||| |||||||    
T  3206517 gcgtcatttgatccatgtagccgaccccacttagtgggataagacttggttattgttgttgtt 3206455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 1615280 - 1615227
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| ||| |||||||||||  ||||||||||||||||||||||||||||    
T  1615280 cgtcatttgatccatgtagccgacctcatttagtgggataagacttggttgttg 1615227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 28085602 - 28085662
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28085602 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28085662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 30679616 - 30679680
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||||||| ||||||||||||||  ||| ||| ||||||||||||||||||||| |||||    
T  30679616 tataacgtcatttgatctatgtagccgatcccacttaatgggataagacttggttgttgttgttg 30679680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 34563 - 34500
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttt 82  Q
    |||| |||| ||| ||||||| ||| ||| ||||||||||||||||||||||||| ||||||||    
T  34563 gcgtaatttgatccatgtagctgaccccacttagtgggataagacttggttgttgttgttgttt 34500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 12890799 - 12890866
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgttttgaa 86  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||| |||||    
T  12890799 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtattgaa 12890866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 5258206 - 5258144
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| | ||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  5258206 gcgtcatttgatccacgtagccgaccccacttagtgggataagtcttggttgttgttgttgtt 5258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 608386 - 608439
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| ||| ||||||||||| | | |||||||||||||||||||||||||    
T  608386 cgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttg 608439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 9706997 - 9707048
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  9706997 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 9707048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 20427691 - 20427632
Alignment:
Q  23 catttaatctatgtagccgactccatttagtgggat-aagacttggttgttgatgttgtt 81  Q
    ||||||||| ||||||||||| | | |||||||||| ||||||||||||||| |||||||    
T  20427691 catttaatcaatgtagccgacccgacttagtgggataaagacttggttgttgttgttgtt 20427632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 34934885 - 34934834
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  34934885 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 34934834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 579642 - 579704
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||||||||||||||  ||| ||||||||||||  ||||||||||| |||||||    
T  579642 gcgtaatttgatctatgtagccgatcccacttagtgggataaagcttggttgttgttgttgtt 579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 5053750 - 5053804
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||| ||| ||| ||||||||||| ||||||||| ||||||| |||||||||||    
T  5053750 gcgtcgtttgatcaatgtagccgaccccatttagtaggataaggcttggttgttg 5053804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 34143823 - 34143761
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||| |||| ||| ||| ||||||||| ||||||||||| |||||||    
T  34143823 gcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgttgtt 34143761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 34156439 - 34156377
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||| |||| ||| ||| ||||||||| ||||||||||| |||||||    
T  34156439 gcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttgttgttgttgtt 34156377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 2079501 - 2079558
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    |||||||| |||||||| ||||||||||||| | |||||||| ||||  |||||||||    
T  2079501 tatagcgtaatttaatccatgtagccgactcgacttagtggggtaaggtttggttgtt 2079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 10098953 - 10098892
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| |||||  |||| ||| |||||||||||||||||| |||||| |||||||    
T  10098953 cgtcatttgatccatgtaatcgaccccacttagtgggataagacttgattgttgttgttgtt 10098892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 21886329 - 21886382
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| ||| ||||||||||| ||||||||||| ||||| ||| |||||||    
T  21886329 cgtcatttgatccatgtagccgaccccatttagtggtataaggcttagttgttg 21886382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 31819055 - 31819116
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||  ||||||||| | ||||||    
T  31819055 gcgtcatttgatccatgtagccgaccccacttagtgggataatgcttggttgtggttgttgt 31819116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 33730194 - 33730243
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  33730194 atttcatccatgtagccgaccccacttagtgggataaggcttggttgttg 33730243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 30642998 - 30643054
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| ||||||||||||||| ||| |||| ||| |||| ||||||||||| ||||||    
T  30642998 atttgatctatgtagccgaccccacttagcgggttaaggcttggttgttgttgttgt 30643054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 14665936 - 14665998
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  14665936 gcgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 14665998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 29816606 - 29816667
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  29816606 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 29816667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 408552 - 408492
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  408552 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 4496611 - 4496670
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  4496611 tcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 4496670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 18855827 - 18855890
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||| | |||| ||| ||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  18855827 tatagcataatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgtt 18855890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 2915554 - 2915492
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||| ||| |||||||    
T  2915554 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttattgttgttgtt 2915492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3302068 - 3302122
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  3302068 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 3302122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 10639526 - 10639588
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| || |||||||||| ||||||||||| |||||||    
T  10639526 gcgtcatttgatccatgtagccgaccccactttgtgggataaggcttggttgttgttgttgtt 10639588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12492442 - 12492380
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||  ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  12492442 gcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 12492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16347438 - 16347384
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| | | |||||||||||||||||||||||||    
T  16347438 gcgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttg 16347384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 28976917 - 28976855
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||  ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  28976917 gcgtcatttgattcatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 28976855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 30213799 - 30213861
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||  |||||||    
T  30213799 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtttttgttgtt 30213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 38685185 - 38685242
Alignment:
Q  13 aatatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttg 70  Q
    ||||| ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||    
T  38685185 aatatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 38685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 13561444 - 13561384
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||| |||||| |||||    
T  13561444 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgttgttg 13561384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 1287637 - 1287578
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||||| || ||| ||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  1287637 gcgtcagttgatccatgtagccgaccccacttagtgggataaggcttggttattgatgtt 1287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 28411914 - 28411961
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  28411914 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 28411961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 11675760 - 11675814
Alignment:
Q  25 tttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||| ||||||||||| ||| ||||| ||||||| ||||||||||| |||||    
T  11675760 tttaatccatgtagccgaccccacttagttggataaggcttggttgttgttgttg 11675814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20456997 - 20457051
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||| ||||||    
T  20456997 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttg 20457051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 32442183 - 32442122
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||||||| ||||||||||||| ||||||| ||| |||||||    
T  32442183 gcgtaatttgatccatgtagccgactccacttagtgggataag-cttggttattgttgttgtt 32442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 43557881 - 43557827
Alignment:
Q  29 atctatgtagccgactccatttagtgggataagacttggttgttgatgttgtttt 83  Q
    ||||||||||||||| ||| ||||||||||||| | ||||||||| ||| |||||    
T  43557881 atctatgtagccgaccccacttagtgggataaggcctggttgttgttgtagtttt 43557827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 218110 - 218057
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    ||||||||  ||| ||||||||||| |||  |||||||||||||||||||||||    
T  218110 gcgtcattagatccatgtagccgaccccacctagtgggataagacttggttgtt 218057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 7678715 - 7678760
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||||    
T  7678715 atgtagccgaccccacttagtgggataaaacttggttgttgttgtt 7678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 14668000 - 14668057
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||| ||||| ||| ||||||||||||||||||||||| | |||||||    
T  14668000 atttgatccatgtaaccgaccccacttagtgggataagacttggttgtagttgttgtt 14668057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 28276467 - 28276524
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| |||||||| |||||| |||| |||||||| ||||||||||| |||||||    
T  28276467 atttgatccatgtagccaactccacttagcgggataaggcttggttgttgttgttgtt 28276524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 38501462 - 38501421
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttga 74  Q
    ||||||||||  ||| ||||||||||||||||||||||||||    
T  38501462 atgtagccgatcccacttagtgggataagacttggttgttga 38501421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 39040977 - 39041034
Alignment:
Q  16 atagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||||||| ||| ||||||||||| ||| ||| |||||||||||||| ||||||    
T  39040977 atagtgtcatttgatccatgtagccgaccccacttaatgggataagacttgattgttg 39041034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 41894302 - 41894359
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| |||||||| || ||| ||||||||||||||||| ||||||| |||||||    
T  41894302 atttgatccatgtagccaaccccacttagtgggataagactttgttgttgttgttgtt 41894359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 42576234 - 42576295
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| | | ||||||||||||| ||||||||||| ||||||    
T  42576234 gcgtaatttgatccatgtagccgacccgacttagtgggataaggcttggttgttgttgttgt 42576295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 1275489 - 1275549
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| ||| ||||||||||| ||| ||||||||||||| | | ||||||| ||||||    
T  1275489 cgtcatttgatccatgtagccgaccccacttagtgggataaggcatagttgttgttgttgt 1275549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 3000977 - 3001017
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||||| ||| ||||||||||||| |||||||||||    
T  3000977 atgtagccgaccccacttagtgggataaggcttggttgttg 3001017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 4653490 - 4653538
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||||| ||| |||||| |||||||||||||||||| |||||||    
T  4653490 atgtatccgaccccacttagtgagataagacttggttgttgttgttgtt 4653538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 5860058 - 5860118
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||||||||||||||| | | ||||||||||||| |||| |||||| |||||    
T  5860058 gcgtaatttgatctatgtagccgaccctacttagtgggataaggcttgattgttgttgttg 5860118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 9400735 - 9400795
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| | ||||||||| |||||||||||||| || ||||||| ||| |||||    
T  9400735 gcgtcatttgatccaggtagccgaccccatttagtgggattaggcttggttattgttgttg 9400795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 25938207 - 25938247
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||||||||||  ||||| ||||||||||||||||||    
T  25938207 atgtagccgactccacatagtgagataagacttggttgttg 25938247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 80
Target Start/End: Original strand, 38661415 - 38661447
Alignment:
Q  48 tttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||||||||||||||||||| ||||||    
T  38661415 tttagtgggataagacttggttgttgttgttgt 38661447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 4029350 - 4029408
Alignment:
Q  23 catttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  4029350 catttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgtt 4029408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 25979289 - 25979227
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  25979289 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 25979227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 28090752 - 28090690
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  28090752 gcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgtt 28090690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 30202188 - 30202126
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  30202188 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 30202126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 1210969 - 1211030
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  1210969 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 1211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 4415576 - 4415633
Alignment:
Q  22 tcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||||| ||| ||||||||||||||||||||||| | ||||||||||||||| |||||    
T  4415576 tcatttgatccatgtagccgactccatttagtggaaaaagacttggttgttgttgttg 4415633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 28533692 - 28533745
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||||||| ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  28533692 cgtcatttgatccatgtagccgaccccacttagtgggataagacttggttgttg 28533745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 34444585 - 34444642
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  34444585 atttgatctatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 34444642  T

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Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 42340099 - 42340140
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  42340099 cgactccatttagtgggataagacttggttgttgttgttgtt 42340140  T

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Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 696494 - 696554
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  696494 gcgtcatttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 696554  T

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Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9592954 - 9593018
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||||||| ||| ||||||||||| ||| ||| ||||||||| ||||||||||| |||||    
T  9592954 tatagcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttg 9593018  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 29577476 - 29577536
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  29577476 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 29577536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 8796433 - 8796492
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    |||| |||||||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  8796433 gcgtaatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgttgtt 8796492  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 4318903 - 4318841
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  4318903 gcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 4318841  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 26299292 - 26299354
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| |||| ||| ||||||||||| ||| |||||||||||||||||||||| || |||||||    
T  26299292 gcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgctgttgttgtt 26299354  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 41165506 - 41165568
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| |||||||    
T  41165506 gcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgtt 41165568  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 49347451 - 49347397
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  49347451 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 49347397  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 51602280 - 51602342
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  51602280 gcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 51602342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 52921304 - 52921358
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  52921304 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52921358  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 6025829 - 6025882
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgtt 72  Q
    ||||||||| ||| |||||||||| |||| |||||||||||| |||||||||||    
T  6025829 gcgtcatttgatccatgtagccgattccacttagtgggataatacttggttgtt 6025882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 15086147 - 15086208
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  15086147 cgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 15086208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 19936684 - 19936745
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||||||  |||||||||||||||||| |||||| ||||||    
T  19936684 gcgtaatttgatccatgtagccgactccgcttagtgggataagacttgattgttgttgttgt 19936745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 37311813 - 37311752
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| ||||||||||| ||| ||||||||| ||| ||||||||||| ||||||    
T  37311813 gcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttgttgt 37311752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 41560453 - 41560514
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  41560453 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 41560514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 43481851 - 43481794
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 43481794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 44751708 - 44751769
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| ||| |||||||||||  || ||||||||||||| ||||||||||| ||||||    
T  44751708 gcgtcatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgttgttgt 44751769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 22090321 - 22090381
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||| ||| ||||||||||| ||| | ||||||||||| ||||||||||| ||||||    
T  22090321 cgtcatttgatccatgtagccgaccccactaagtgggataaggcttggttgttgttgttgt 22090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 34792407 - 34792347
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    ||||||||| ||| ||||||||||| ||| ||| ||||||||| ||||||||||| |||||    
T  34792407 gcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgttgttg 34792347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 38758064 - 38758016
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  38758064 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 38758016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 44941834 - 44941774
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttg 79  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  44941834 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttg 44941774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 4707265 - 4707218
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  4707265 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 4707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 32079235 - 32079176
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| || |||||||||| ||||||||||| ||||    
T  32079235 gcgtcatttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgttgtt 32079176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 38807715 - 38807668
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| ||||||    
T  38807715 atgtagccgaccccacttagtgggataaggcttggttgttgttgttgt 38807668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 51440823 - 51440764
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||  ||||| ||||| ||| ||||||||||||||||||||||||| ||||    
T  51440823 gcgtcatttgattcatgtaaccgaccccacttagtgggataagacttggttgttgttgtt 51440764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 3818910 - 3818852
Alignment:
Q  23 catttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||| ||| |||||||||||| || ||||||||||||| |||||| |||| |||||||    
T  3818910 catttgatccatgtagccgactgcacttagtgggataaggcttggtcgttgttgttgtt 3818852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 4380188 - 4380237
Alignment:
Q  23 catttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||| ||| ||||||||||| ||| |||||||||||||||||||||||||    
T  4380188 cattttatccatgtagccgac-ccacttagtgggataagacttggttgttg 4380237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 8672138 - 8672204
Alignment:
Q  15 tatagcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||||| ||| || ||||| || ||| ||||| ||||||| ||||||||||| |||||||    
T  8672138 tatagcgtcatttgatccatatagccaaccccacttagtaggataaggcttggttgttgttgttgtt 8672204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 37462934 - 37462880
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  37462934 gcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 37462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 46423274 - 46423220
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| || ||||||||    
T  46423274 gcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttg 46423220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 49377539 - 49377577
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgt 71  Q
    ||||||||||||||| ||||||||||||| |||||||||    
T  49377539 atgtagccgactccagttagtgggataaggcttggttgt 49377577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 7922062 - 7922111
Alignment:
Q  32 tatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||  ||| ||| ||||||||||||||||||||||||| |||||||    
T  7922062 tatgtagttgaccccacttagtgggataagacttggttgttgttgttgtt 7922111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 11584241 - 11584282
Alignment:
Q  39 ccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    ||||||||| |||||||||||||||||| |||||| ||||||    
T  11584241 ccgactccacttagtgggataagacttgattgttgttgttgt 11584282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 41017254 - 41017213
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| ||||||| ||||||||||||||||| |||||||    
T  41017254 cgactccacttagtggaataagacttggttgttgttgttgtt 41017213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 49102324 - 49102365
Alignment:
Q  40 cgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||||||||||||| | ||||||||| |||||||    
T  49102324 cgactccatttagtgggataaggcatggttgttgttgttgtt 49102365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 52561642 - 52561593
Alignment:
Q  24 atttaatctatgtagccgactccatttagtgggataagacttggttgttg 73  Q
    |||| ||| ||||||||||| ||| ||||||||||||| |||||||||||    
T  52561642 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52561593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 2914167 - 2914119
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||| || ||| ||||||||||||| ||||||||||| |||||||    
T  2914167 atgtagccaaccccacttagtgggataaggcttggttgttgttgttgtt 2914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 3059554 - 3059598
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||||| || |||||||||| ||||||||||| ||||||    
T  3059554 tagccgactccacttggtgggataaggcttggttgttgttgttgt 3059598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38877401 - 38877349
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgt 71  Q
    ||||||||| ||| ||||||||||  ||| ||||||||||||| |||||||||    
T  38877401 gcgtcatttgatccatgtagccgaacccacttagtgggataaggcttggttgt 38877349  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 45510894 - 45510850
Alignment:
Q  16 atagcgtcatttaatctatgtagccgactccatttagtgggataa 60  Q
    ||||||| |||||||| ||||||||||| ||| ||||||||||||    
T  45510894 atagcgtaatttaatccatgtagccgaccccacttagtgggataa 45510850  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 25589 - 25529
Alignment:
Q  20 cgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgt 80  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||| ||||||    
T  25589 cgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgttgttgt 25529  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 31694 - 31754
Alignment:
Q  21 gtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| |||||||    
T  31694 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtt 31754  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 555 - 614
Alignment:
Q  19 gcgtcatttaatctatgtagccgactccatttagtgggataagacttggttgttgatgtt 78  Q
    ||||||||| ||| ||||||||||| ||| ||||||||||||| |||| |||||| ||||    
T  555 gcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgttgtt 614  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 163235 - 163190
Alignment:
Q  36 tagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||||    
T  163235 tagccgactccatttagtggaataaaacttgattgttgttgttgtt 163190  T

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Target: scaffold0491 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 3677 - 3713
Alignment:
Q  35 gtagccgactccatttagtgggataagacttggttgt 71  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  3677 gtagccgaccccacttagtgggataagacttggttgt 3713  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 99330 - 99282
Alignment:
Q  33 atgtagccgactccatttagtgggataagacttggttgttgatgttgtt 81  Q
    ||||||||||| |||  |||||||||||| ||||||||||| |||||||    
T  99330 atgtagccgacaccacatagtgggataaggcttggttgttgttgttgtt 99282  T

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