View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2495_high_69 (Length: 265)

Name: NF2495_high_69
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2495_high_69
NF2495_high_69
[»] chr3 (21 HSPs)
chr3 (1-248)||(54081634-54081878)
chr3 (1-41)||(44069473-44069513)
chr3 (1-34)||(21169669-21169702)
chr3 (1-38)||(41998164-41998201)
chr3 (1-40)||(14353397-14353436)
chr3 (1-40)||(45871694-45871733)
chr3 (1-39)||(28691112-28691150)
chr3 (1-34)||(2829410-2829443)
chr3 (1-38)||(4846946-4846983)
chr3 (1-38)||(12123089-12123126)
chr3 (1-38)||(45171067-45171104)
chr3 (5-38)||(46766968-46767001)
chr3 (1-41)||(7274649-7274689)
chr3 (1-37)||(8846076-8846112)
chr3 (1-37)||(8846426-8846462)
chr3 (1-41)||(10756714-10756754)
chr3 (1-41)||(17102380-17102420)
chr3 (1-37)||(44069123-44069159)
chr3 (1-33)||(49222040-49222072)
chr3 (2-34)||(54081287-54081319)
chr3 (1-37)||(54107669-54107705)
[»] chr5 (23 HSPs)
chr5 (1-38)||(5088478-5088515)
chr5 (1-39)||(10656092-10656130)
chr5 (1-39)||(38416484-38416522)
chr5 (1-46)||(3878472-3878517)
chr5 (3-40)||(5460185-5460222)
chr5 (1-34)||(5624382-5624415)
chr5 (1-34)||(14051892-14051925)
chr5 (1-38)||(26288990-26289027)
chr5 (1-42)||(29023932-29023973)
chr5 (1-37)||(28392120-28392156)
chr5 (1-37)||(42710700-42710736)
chr5 (1-40)||(15670501-15670540)
chr5 (1-40)||(41860029-41860068)
chr5 (4-38)||(39706054-39706088)
chr5 (1-38)||(7399076-7399113)
chr5 (1-38)||(19204943-19204980)
chr5 (1-38)||(35263493-35263530)
chr5 (4-40)||(3879365-3879401)
chr5 (2-38)||(18514287-18514323)
chr5 (3-35)||(32272192-32272224)
chr5 (1-41)||(35263844-35263884)
chr5 (1-37)||(40589054-40589090)
chr5 (1-37)||(40589657-40589693)
[»] chr6 (10 HSPs)
chr6 (1-45)||(25551339-25551383)
chr6 (1-37)||(9173901-9173937)
chr6 (1-41)||(13155835-13155875)
chr6 (1-41)||(13160691-13160731)
chr6 (1-40)||(35132940-35132979)
chr6 (1-37)||(1860835-1860871)
chr6 (1-41)||(24604871-24604911)
chr6 (4-40)||(25551689-25551725)
chr6 (1-41)||(33548207-33548247)
chr6 (1-41)||(33971924-33971964)
[»] chr2 (27 HSPs)
chr2 (1-37)||(36211749-36211785)
chr2 (1-40)||(16261220-16261259)
chr2 (1-38)||(27476717-27476754)
chr2 (1-37)||(4104509-4104545)
chr2 (2-38)||(18565065-18565101)
chr2 (1-37)||(20908861-20908897)
chr2 (1-40)||(20908508-20908547)
chr2 (1-40)||(31450663-31450702)
chr2 (1-39)||(16736099-16736137)
chr2 (1-39)||(28203210-28203248)
chr2 (1-39)||(40694193-40694231)
chr2 (1-39)||(41377353-41377390)
chr2 (1-38)||(13354527-13354564)
chr2 (1-34)||(16655956-16655989)
chr2 (1-38)||(17856539-17856576)
chr2 (1-38)||(25642618-25642655)
chr2 (1-34)||(27132514-27132547)
chr2 (1-34)||(34820629-34820662)
chr2 (1-34)||(39912630-39912663)
chr2 (1-37)||(4104159-4104195)
chr2 (1-33)||(16655610-16655642)
chr2 (1-37)||(27132860-27132896)
chr2 (4-40)||(27914246-27914282)
chr2 (1-37)||(28202860-28202896)
chr2 (5-41)||(28631628-28631664)
chr2 (1-37)||(32933941-32933977)
chr2 (1-37)||(41377704-41377740)
[»] chr8 (22 HSPs)
chr8 (1-39)||(3869299-3869337)
chr8 (1-38)||(29027318-29027355)
chr8 (4-40)||(1825807-1825843)
chr8 (4-40)||(1860252-1860288)
chr8 (1-41)||(24456730-24456770)
chr8 (1-40)||(8653933-8653972)
chr8 (3-34)||(32733708-32733739)
chr8 (4-38)||(12873399-12873433)
chr8 (1-34)||(1826141-1826174)
chr8 (1-34)||(1860586-1860619)
chr8 (1-38)||(5416811-5416848)
chr8 (1-34)||(6844790-6844823)
chr8 (1-38)||(11639051-11639088)
chr8 (1-42)||(11639385-11639426)
chr8 (1-38)||(24457002-24457039)
chr8 (1-34)||(26736128-26736161)
chr8 (1-38)||(30872782-30872819)
chr8 (1-34)||(37393480-37393513)
chr8 (1-38)||(44678316-44678353)
chr8 (2-38)||(21512412-21512448)
chr8 (3-35)||(30568628-30568660)
chr8 (1-37)||(40040162-40040198)
[»] chr1 (27 HSPs)
chr1 (2-40)||(37198929-37198967)
chr1 (1-37)||(34279240-34279276)
chr1 (1-40)||(34279591-34279630)
chr1 (1-44)||(50118340-50118383)
chr1 (4-38)||(4550953-4550987)
chr1 (1-35)||(5117995-5118029)
chr1 (4-38)||(6181969-6182003)
chr1 (2-40)||(32563956-32563994)
chr1 (4-46)||(36657854-36657896)
chr1 (1-38)||(1831663-1831700)
chr1 (1-38)||(9881551-9881588)
chr1 (1-38)||(14118529-14118566)
chr1 (1-38)||(16268039-16268076)
chr1 (4-41)||(19269356-19269393)
chr1 (1-38)||(23281360-23281397)
chr1 (1-38)||(25088015-25088052)
chr1 (1-38)||(28112720-28112757)
chr1 (1-38)||(33753224-33753261)
chr1 (1-38)||(34028720-34028757)
chr1 (1-38)||(34029071-34029108)
chr1 (4-45)||(40702860-40702901)
chr1 (1-38)||(45305759-45305796)
chr1 (1-46)||(51810128-51810173)
chr1 (1-37)||(14776085-14776121)
chr1 (1-37)||(24590575-24590611)
chr1 (5-37)||(32516776-32516808)
chr1 (1-37)||(51691874-51691910)
[»] chr7 (16 HSPs)
chr7 (1-38)||(23472592-23472629)
chr7 (1-38)||(31715632-31715669)
chr7 (1-41)||(31715971-31716011)
chr7 (1-41)||(47250896-47250936)
chr7 (1-39)||(10625434-10625472)
chr7 (2-43)||(473186-473227)
chr7 (4-41)||(2357063-2357100)
chr7 (1-38)||(9034665-9034702)
chr7 (4-37)||(11679055-11679088)
chr7 (1-38)||(32706731-32706768)
chr7 (1-38)||(35085738-35085775)
chr7 (1-34)||(39118013-39118046)
chr7 (1-38)||(43726592-43726629)
chr7 (4-37)||(47305127-47305160)
chr7 (1-37)||(23472906-23472942)
chr7 (1-41)||(47251246-47251286)
[»] chr4 (27 HSPs)
chr4 (1-38)||(38866397-38866434)
chr4 (4-41)||(44169975-44170012)
chr4 (1-38)||(52914951-52914988)
chr4 (1-37)||(32384653-32384689)
chr4 (1-37)||(34958832-34958868)
chr4 (1-41)||(40067344-40067384)
chr4 (1-37)||(46200835-46200871)
chr4 (1-37)||(46535523-46535559)
chr4 (1-40)||(45911924-45911963)
chr4 (1-40)||(46200481-46200520)
chr4 (1-36)||(46535872-46535907)
chr4 (1-40)||(54136088-54136127)
chr4 (1-39)||(9010855-9010893)
chr4 (1-39)||(21217845-21217883)
chr4 (1-35)||(29864525-29864559)
chr4 (1-34)||(8247096-8247129)
chr4 (4-37)||(9657667-9657700)
chr4 (3-36)||(54191936-54191969)
chr4 (1-37)||(10014465-10014501)
chr4 (1-37)||(10017815-10017851)
chr4 (1-37)||(10021606-10021642)
chr4 (1-37)||(18862791-18862827)
chr4 (1-45)||(37515803-37515847)
chr4 (1-37)||(40067698-40067734)
chr4 (1-37)||(44710403-44710439)
chr4 (1-37)||(45683467-45683503)
chr4 (1-41)||(48209944-48209984)
[»] scaffold0809 (1 HSPs)
scaffold0809 (1-38)||(4668-4705)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-37)||(93188-93221)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-37)||(11837-11873)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-37)||(40702-40738)


Alignment Details
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 54081634 - 54081878
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaaatcaaatctatgtaatttaaaggcactatgcaatgccaagtccaaccaaccaacca 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54081634 acctaaatagttaagggaccaaaaatacaatttagcctttaaaaatcgaatctatgtaatttaaaggcactatgcaatg-caagtccaaccaaccaacca 54081732  T
Q  101 tgggttgtactttgtcaacaacaacatcaacnnnnnnnnnnncatgtgttgtcctttgttgttaaagacaaacattgttgttagttacagaaacaagcaa 200  Q
    |||||||||||||||||||||||||||||||           |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  54081733 tgggttgtactttgtcaacaacaacatcaac--aacaaaaaacatgtgttgtactttgttgttaaagacaaacatagttgttagttacataaacaagcaa 54081830  T
Q  201 aaaagtaaaggcggagaaaataaagtgtcaaaactgacgtaatgaaat 248  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  54081831 aaaagtaaaggcggagaaaataaagtgtcaaaactgacataatgaaat 54081878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44069473 - 44069513
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  44069473 acctaaatagttaagggaccaaaaatacaatttagccttta 44069513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21169702 - 21169669
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  21169702 acctaaatagttaagagaccaaaaatacaattta 21169669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41998164 - 41998201
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  41998164 acctaaatagttaagggaccaaaaatacaatttagcct 41998201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 14353397 - 14353436
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  14353397 acctaaatagttaagggaccaaaaatacaatttatccttt 14353436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45871733 - 45871694
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  45871733 acctaaatagttaagggaccaaaaatgcaatttagccttt 45871694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28691150 - 28691112
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  28691150 acctaaataattaagggaccaaaaatacaatttagcctt 28691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2829443 - 2829410
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  2829443 acctaaatagttaagggaccaaaaatacaattta 2829410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4846946 - 4846983
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  4846946 acctaaatagttaagggaccaaaaatgcaatttagcct 4846983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12123126 - 12123089
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  12123126 acctaaatagttaagggaccaaaaatgcaatttagcct 12123089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45171104 - 45171067
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||| ||||||||||||||||    
T  45171104 acctaaatagttaagggaccagaaatacaatttagcct 45171067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 46766968 - 46767001
Alignment:
Q  5 aaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||| ||||||||||||||||||||||    
T  46766968 aaatagttaagggaccaaaaatacaatttagcct 46767001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7274689 - 7274649
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||| ||||| |||||||||| ||||||||||||||    
T  7274689 acctaaatatttaagggaccaaaaatgcaatttagccttta 7274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8846112 - 8846076
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  8846112 acctaaatagttaagggaccaaaaatgcaatttagcc 8846076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8846426 - 8846462
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  8846426 acctaaatagttaagggaccaaaaatgcaatttagcc 8846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10756754 - 10756714
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    |||||||||| |||| ||||||||||||||||||| |||||    
T  10756754 acctaaatagctaagggaccaaaaatacaatttagtcttta 10756714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17102420 - 17102380
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||| |||||| ||||||||| ||||||||||||||    
T  17102420 acctaaataattaagaaaccaaaaatgcaatttagccttta 17102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44069159 - 44069123
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  44069159 acctaaatagttaagggaccaaaaatgcaatttagcc 44069123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49222072 - 49222040
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattt 33  Q
    ||||||||||||||| |||||||||||||||||    
T  49222072 acctaaatagttaagggaccaaaaatacaattt 49222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 54081319 - 54081287
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaattta 34  Q
    |||||||||||||| ||||||||||||||||||    
T  54081319 cctaaatagttaagggaccaaaaatacaattta 54081287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 54107705 - 54107669
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  54107705 acctaaatagttaagggaccaaaaatgcaatttagcc 54107669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5088478 - 5088515
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5088478 acctaaatagttaagagaccaaaaatacaatttagcct 5088515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10656130 - 10656092
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10656130 acctaaatagttaagggaccaaaaatacaatttagcctt 10656092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38416484 - 38416522
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  38416484 acctaaataattaagagaccaaaaatacaatttagcctt 38416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3878517 - 3878472
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaaat 46  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  3878517 acctaaataattaagggaccaaaaatacaatttagccttaaaaaat 3878472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 5460222 - 5460185
Alignment:
Q  3 ctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  5460222 ctaaatagttaagggaccaaaaatacaatttagccttt 5460185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5624415 - 5624382
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5624415 acctaaatagttaagagaccaaaaatacaattta 5624382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14051925 - 14051892
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14051925 acctaaatagttaagagaccaaaaatacaattta 14051892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26289027 - 26288990
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  26289027 acctaaatagttaagggaccaaaaatacaatttagcct 26288990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29023973 - 29023932
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaa 42  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  29023973 acctaaatagttaagggaccaaaaatgcaatttagcctttaa 29023932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28392120 - 28392156
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28392120 acctaaatagttaagagaccaaaaatagaatttagcc 28392156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42710700 - 42710736
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42710700 acctaaatagttaagggaccaaaaatacaatttagcc 42710736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 15670501 - 15670540
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  15670501 acctaaatagttaagggaccaaaaatacaatttaaccttt 15670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 41860029 - 41860068
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||||||||||||||||| ||||||| |||||    
T  41860029 acctaaatagttaagagaccaaaaatgcaatttaaccttt 41860068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 39706088 - 39706054
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  39706088 taaatagttaagagaccaaaaatgcaatttagcct 39706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7399113 - 7399076
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  7399113 acctaaatagttaagggaccaaaaatgcaatttagcct 7399076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19204980 - 19204943
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  19204980 acctaaatagttaagggaccaaaaatgcaatttagcct 19204943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35263530 - 35263493
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  35263530 acctaaatagttaagggaccaaaaatgcaatttagcct 35263493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 3879365 - 3879401
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||| |||||||||| |||||||||||||    
T  3879365 taaatagttaagggaccaaaaatgcaatttagccttt 3879401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 18514323 - 18514287
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||||||| |||||||||| |||||||||||    
T  18514323 cctaaatagttaagggaccaaaaatgcaatttagcct 18514287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 32272192 - 32272224
Alignment:
Q  3 ctaaatagttaagagaccaaaaatacaatttag 35  Q
    |||||||||||||||||||||||| ||||||||    
T  32272192 ctaaatagttaagagaccaaaaatgcaatttag 32272224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35263844 - 35263884
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||| ||||| |||||||||| ||||||||||||||    
T  35263844 acctaaataattaagggaccaaaaatgcaatttagccttta 35263884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40589090 - 40589054
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  40589090 acctaaatagttaagggaccaaaaatgcaatttagcc 40589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40589693 - 40589657
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  40589693 acctaaatagttaagggaccaaaaatgcaatttagcc 40589657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000006; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25551383 - 25551339
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaaa 45  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  25551383 acctaaatagttaagggaccaaaaatacaatttagccttaaaaaa 25551339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9173937 - 9173901
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9173937 acctaaatagttaagggaccaaaaatacaatttagcc 9173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13155875 - 13155835
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  13155875 acctaaatagttaagagaccaaaaatataatttatccttta 13155835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13160731 - 13160691
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  13160731 acctaaatagttaagagaccaaaaatataatttatccttta 13160691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 35132940 - 35132979
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  35132940 acctaaatagttaagggaccgaaaatacaatttagccttt 35132979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1860835 - 1860871
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  1860835 acctaaatagttaagggaccaaaaatgcaatttagcc 1860871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24604911 - 24604871
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  24604911 acctaaatagttaagggaccaaaaatgcaatttaaccttta 24604871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 25551689 - 25551725
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||| |||||||||||||||||| |||||    
T  25551689 taaatagttaagggaccaaaaatacaatttaaccttt 25551725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 33548207 - 33548247
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| ||| |||||| ||||||||||||||    
T  33548207 acctaaatagttaagggactaaaaattcaatttagccttta 33548247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33971964 - 33971924
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  33971964 acctaaatagttaagggaccaaaaatgcaatttaaccttta 33971924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 36211749 - 36211785
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  36211749 acctaaatagttaagagaccaaaaatacaatttagcc 36211785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16261220 - 16261259
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  16261220 acctaaatagttaagggaccaaaaatacaatttagccttt 16261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27476717 - 27476754
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||||||||||||||||||| |||||||||||    
T  27476717 acctaaatagttaagagaccaaaaatgcaatttagcct 27476754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4104509 - 4104545
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4104509 acctaaatagttaagggaccaaaaatacaatttagcc 4104545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 18565101 - 18565065
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18565101 cctaaatagttaagagaccaaaaatgcaatttagcct 18565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20908861 - 20908897
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20908861 acctaaatagttaagggaccaaaaatacaatttagcc 20908897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20908547 - 20908508
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  20908547 acctaaataattaagggaccaaaaatacaatttagccttt 20908508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31450702 - 31450663
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  31450702 acctaaatagttaagggaccaaaaatgcaatttagccttt 31450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16736137 - 16736099
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  16736137 acctaaatagttaagggaccaaaaatgcaatttagcctt 16736099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28203210 - 28203248
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  28203210 acctaaatagttaagggaccaaaaatgcaatttagcctt 28203248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40694231 - 40694193
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  40694231 acctaaatagttaagggaccaaaaatataatttagcctt 40694193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41377390 - 41377353
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  41377390 acctaaatagttaag-gaccaaaaatacaatttagcctt 41377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13354527 - 13354564
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  13354527 acctaaatagttaagggaccaaaattacaatttagcct 13354564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16655956 - 16655989
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  16655956 acctaaatagttaagggaccaaaaatacaattta 16655989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17856539 - 17856576
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  17856539 acctaaatagttaagggaccaaaaatgcaatttagcct 17856576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25642618 - 25642655
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| || |||||||||||||||||||    
T  25642618 acctaaatagttaagggaacaaaaatacaatttagcct 25642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27132547 - 27132514
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  27132547 acctaaatagttaagggaccaaaaatacaattta 27132514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34820629 - 34820662
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  34820629 acctaaatagttaagggaccaaaaatacaattta 34820662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39912663 - 39912630
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  39912663 acctaaatagttaagggaccaaaaatacaattta 39912630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4104195 - 4104159
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  4104195 acctaaatagttaagggaccaaaaatgcaatttagcc 4104159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16655642 - 16655610
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattt 33  Q
    ||||||||||||||| |||||||||||||||||    
T  16655642 acctaaatagttaagggaccaaaaatacaattt 16655610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27132860 - 27132896
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  27132860 acctaaatagttaagggaccaaaaatgcaatttagcc 27132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 27914246 - 27914282
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||| || |||||||||||||||||||||    
T  27914246 taaatagttaagggatcaaaaatacaatttagccttt 27914282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28202896 - 28202860
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  28202896 acctaaatagttaagggaccaaaaatgcaatttagcc 28202860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 28631628 - 28631664
Alignment:
Q  5 aaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  28631628 aaatagttaagggaccaaaaatacaatttaaccttta 28631664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 32933941 - 32933977
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  32933941 acctaaatagttaagggaccaaaaatgcaatttagcc 32933977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41377704 - 41377740
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  41377704 acctaaatagttaagggaccaaaaatgcaatttagcc 41377740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3869299 - 3869337
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3869299 acctaaatagttaagggaccaaaaatacaatttagcctt 3869337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29027318 - 29027355
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  29027318 acctaaatagttaagagaccaaaaatataatttagcct 29027355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 1825843 - 1825807
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1825843 taaatagttaagggaccaaaaatacaatttagccttt 1825807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 1860288 - 1860252
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1860288 taaatagttaagggaccaaaaatacaatttagccttt 1860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24456770 - 24456730
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  24456770 acctaaatagttaagggaccaaaaatgcaatttagccttta 24456730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8653972 - 8653933
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  8653972 acctaaatagttaggggaccaaaaatacaatttagccttt 8653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 32733739 - 32733708
Alignment:
Q  3 ctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||||||||||||||||||||    
T  32733739 ctaaatagttaagagaccaaaaatacaattta 32733708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 12873399 - 12873433
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||||| ||||||||||||||||||||||    
T  12873399 taaatagttaagggaccaaaaatacaatttagcct 12873433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1826141 - 1826174
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  1826141 acctaaatagttaagggaccaaaaatacaattta 1826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1860586 - 1860619
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  1860586 acctaaatagttaagggaccaaaaatacaattta 1860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5416848 - 5416811
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  5416848 acctaaatagttaggggaccaaaaatacaatttagcct 5416811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6844790 - 6844823
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    |||||||||||||||||||||||||| |||||||    
T  6844790 acctaaatagttaagagaccaaaaatgcaattta 6844823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11639088 - 11639051
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  11639088 acctaaatagttaagggacaaaaaatacaatttagcct 11639051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11639385 - 11639426
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaa 42  Q
    ||||||||||||||| ||| |||||| |||||||||||||||    
T  11639385 acctaaatagttaagggacgaaaaatgcaatttagcctttaa 11639426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24457002 - 24457039
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  24457002 acctaaatagttaagggaccaaaaatgcaatttagcct 24457039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 26736161 - 26736128
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    |||||||||||||||||||||||||| |||||||    
T  26736161 acctaaatagttaagagaccaaaaatgcaattta 26736128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30872819 - 30872782
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  30872819 acctaaatagttaagggaccaaaaatgcaatttagcct 30872782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37393513 - 37393480
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  37393513 acctaaatagttaagggaccaaaaatacaattta 37393480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44678353 - 44678316
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  44678353 acctaaatagttaagggaccaaaaatgcaatttagcct 44678316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 21512448 - 21512412
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  21512448 cctaaatagttaagggacgaaaaatacaatttagcct 21512412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 30568628 - 30568660
Alignment:
Q  3 ctaaatagttaagagaccaaaaatacaatttag 35  Q
    ||||||||||||| |||||||||||||||||||    
T  30568628 ctaaatagttaagggaccaaaaatacaatttag 30568660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40040198 - 40040162
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  40040198 acctaaatagttaagggaccaaaaatgcaatttagcc 40040162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 37198967 - 37198929
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  37198967 cctaaatagttaagaaaccaaaaatacaatttagccttt 37198929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34279276 - 34279240
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  34279276 acctaaatagttaagagaccaaaaatgcaatttagcc 34279240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34279591 - 34279630
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  34279591 acctaaatagttaagggaccaaaaatgcaatttagccttt 34279630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 50118383 - 50118340
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaa 44  Q
    ||||||||||||||| |||||||||||||||||| || ||||||    
T  50118383 acctaaatagttaagggaccaaaaatacaatttaaccattaaaa 50118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 4550953 - 4550987
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||||||| |||||||||||    
T  4550953 taaatagttaagagaccaaaaatgcaatttagcct 4550987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5118029 - 5117995
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttag 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  5118029 acctaaatagttaagggaccaaaaatacaatttag 5117995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 38
Target Start/End: Original strand, 6181969 - 6182003
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||| ||||||||||||||||||||||||    
T  6181969 taaatagttatgagaccaaaaatacaatttagcct 6182003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 32563994 - 32563956
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  32563994 cctaaatagttaagggaccaaaaatgcaatttagccttt 32563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 36657854 - 36657896
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcctttaaaaat 46  Q
    |||||||||||| ||||||||||||||||| |||| |||||||    
T  36657854 taaatagttaagggaccaaaaatacaattttgcctgtaaaaat 36657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1831700 - 1831663
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  1831700 acctaaatagttaagagaccgaaaattcaatttagcct 1831663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9881588 - 9881551
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  9881588 acctaaatagttaagggaccaaaaatgcaatttagcct 9881551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14118566 - 14118529
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  14118566 acctaaatagttaagggaccaaaaatgcaatttagcct 14118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16268039 - 16268076
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  16268039 acctaaatagttaagggaccaaaaatgcaatttagcct 16268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 19269393 - 19269356
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttta 41  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  19269393 taaatagttaagggaccaaaaatgcaatttagccttta 19269356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23281360 - 23281397
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  23281360 acctaaatagttaagggaccaaaaatgcaatttagcct 23281397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25088052 - 25088015
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  25088052 acctaaatagttaagggaccaaaaatgcaatttagcct 25088015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28112757 - 28112720
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  28112757 acctaaatagttaagggaccaaaaatgcaatttagcct 28112720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33753261 - 33753224
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  33753261 acctaaatagttaagggaccaaaaatgcaatttagcct 33753224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34028757 - 34028720
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  34028757 acctaaatagttaagggaccaaaaatgcaatttagcct 34028720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34029071 - 34029108
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  34029071 acctaaatagttaagggaccaaaaatgcaatttagcct 34029108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 40702901 - 40702860
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcctttaaaaa 45  Q
    |||||||||||| ||||||||| | |||||||||||||||||    
T  40702901 taaatagttaagggaccaaaaacataatttagcctttaaaaa 40702860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45305759 - 45305796
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  45305759 acctaaatagttaagggaccaaaaatgcaatttagcct 45305796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 51810173 - 51810128
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaaat 46  Q
    ||||||||||||||||||| |||||| |||||| ||||| ||||||    
T  51810173 acctaaatagttaagagactaaaaatgcaattttgccttaaaaaat 51810128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14776085 - 14776121
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  14776085 acctaaatagttaagtgaccaaaaatgcaatttagcc 14776121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 24590575 - 24590611
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  24590575 acctaaatagttaagggaccaaaaatataatttagcc 24590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 32516808 - 32516776
Alignment:
Q  5 aaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||||||||||| |||||||||    
T  32516808 aaatagttaagagaccaaaaatataatttagcc 32516776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51691910 - 51691874
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  51691910 acctaaatagttaagggaccaaaaatgcaatttagcc 51691874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23472629 - 23472592
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  23472629 acctaaatagttaagggaccaaaaatacaatttagcct 23472592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31715669 - 31715632
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31715669 acctaaatagttaagagacaaaaaatacaatttagcct 31715632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31715971 - 31716011
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  31715971 acctaaatagttaagggaccaaaaatgcaatttagccttta 31716011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47250896 - 47250936
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| |||||||||| ||||||||||||||    
T  47250896 acctaaatagttaagggaccaaaaatgcaatttagccttta 47250936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10625434 - 10625472
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  10625434 acctaaatagttaagggaccaaaaatgcaatttagcctt 10625472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 473227 - 473186
Alignment:
Q  2 cctaaatagttaagagaccaaaaatacaatttagcctttaaa 43  Q
    |||||||||||||| || ||||||| ||||||||||||||||    
T  473227 cctaaatagttaagcgatcaaaaatgcaatttagcctttaaa 473186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 2357100 - 2357063
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  2357100 taaatagttaagagatcaaaaatgcaatttagccttta 2357063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9034665 - 9034702
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  9034665 acctaaatagttaaaggaccaaaaatacaatttagcct 9034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 11679055 - 11679088
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||| |||||||||||||||||||||    
T  11679055 taaatagttaagggaccaaaaatacaatttagcc 11679088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32706768 - 32706731
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  32706768 acctaaatagttaagggaccaaaaatgcaatttagcct 32706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35085775 - 35085738
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  35085775 acctaaatagttaagggaccaaaaatgcaatttagcct 35085738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39118046 - 39118013
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  39118046 acctaaatagttaagggaccaaaaatacaattta 39118013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43726592 - 43726629
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  43726592 acctaaatagttaagggaccaaaaatgcaatttagcct 43726629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 47305160 - 47305127
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||| |||||||||||||||||||||    
T  47305160 taaatagttaagggaccaaaaatacaatttagcc 47305127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23472906 - 23472942
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  23472906 acctaaatagttaagggaccaaaaatgcaatttagcc 23472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47251246 - 47251286
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| ||| |||||| ||||||||||||||    
T  47251246 acctaaatagttaagggacaaaaaatgcaatttagccttta 47251286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38866434 - 38866397
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38866434 acctaaatagttaagggaccaaaaatacaatttagcct 38866397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 44170012 - 44169975
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagccttta 41  Q
    |||||||||||| |||||||||||||||||||||||||    
T  44170012 taaatagttaagggaccaaaaatacaatttagccttta 44169975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 52914988 - 52914951
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  52914988 acctaaatagttaagggaccaaaaatacaatttagcct 52914951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 32384689 - 32384653
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32384689 acctaaatagttaagggaccaaaaatacaatttagcc 32384653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 34958868 - 34958832
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34958868 acctaaatagttaagggaccaaaaatacaatttagcc 34958832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40067384 - 40067344
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  40067384 acctaaatagttaagggacaaaaaatacaatttagccttta 40067344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46200835 - 46200871
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46200835 acctaaatagttaagagaccaaaaatgcaatttagcc 46200871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46535559 - 46535523
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||||||||||||||    
T  46535559 acctaaatagttaagggaccaaaaatacaatttagcc 46535523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 45911924 - 45911963
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  45911924 acctaaatagttaggggaccaaaaatacaatttagccttt 45911963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 46200520 - 46200481
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  46200520 acctaaatagttaagggaccaaaaatgcaatttagccttt 46200481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 46535872 - 46535907
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagc 36  Q
    ||||||||||||||| ||||||||||||||||||||    
T  46535872 acctaaatagttaagtgaccaaaaatacaatttagc 46535907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 54136127 - 54136088
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttt 40  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  54136127 acctaaatagttaagggaccaaaaatgcaatttagccttt 54136088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9010855 - 9010893
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  9010855 acctaaatagttaagggaccaaaaatataatttagcctt 9010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21217883 - 21217845
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctt 39  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  21217883 acctaaatagttaagggaccaaaaatgcaatttagcctt 21217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 29864525 - 29864559
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttag 35  Q
    ||||||||||||||| |||||||||||||||||||    
T  29864525 acctaaatagttaagggaccaaaaatacaatttag 29864559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8247096 - 8247129
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaattta 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  8247096 acctaaatagttaagggaccaaaaatacaattta 8247129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 9657700 - 9657667
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||| |||||||||||||||||||||    
T  9657700 taaatagttaagggaccaaaaatacaatttagcc 9657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 54191936 - 54191969
Alignment:
Q  3 ctaaatagttaagagaccaaaaatacaatttagc 36  Q
    ||||||||||||| ||||||||||||||||||||    
T  54191936 ctaaatagttaagggaccaaaaatacaatttagc 54191969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10014501 - 10014465
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  10014501 acctaaatagttaagggaccaaaaatgcaatttagcc 10014465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10017851 - 10017815
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  10017851 acctaaatagttaagggaccaaaaatgcaatttagcc 10017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10021642 - 10021606
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  10021642 acctaaatagttaagggaccaaaaatgcaatttagcc 10021606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18862791 - 18862827
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  18862791 acctaaatagttaagggaccaaaaatgcaatttagcc 18862827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37515803 - 37515847
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcctttaaaaa 45  Q
    ||||||||||||||| ||| ||||||| |||||| ||||||||||    
T  37515803 acctaaatagttaagggactaaaaataaaatttaacctttaaaaa 37515847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40067698 - 40067734
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| || ||||||||||||||||||    
T  40067698 acctaaatagttaagggatcaaaaatacaatttagcc 40067734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44710439 - 44710403
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  44710439 acctaaatagttaagggaccaaaaatgcaatttagcc 44710403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 45683467 - 45683503
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||||||  ||||||||||||||||||||    
T  45683467 acctaaatagttaaggaaccaaaaatacaatttagcc 45683503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48209984 - 48209944
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagccttta 41  Q
    ||||||||||||||| ||||||||||  |||||||||||||    
T  48209984 acctaaatagttaagggaccaaaaatgtaatttagccttta 48209944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4668 - 4705
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcct 38  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  4668 acctaaatagttaagggaccaaaaatgcaatttagcct 4705  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 93221 - 93188
Alignment:
Q  4 taaatagttaagagaccaaaaatacaatttagcc 37  Q
    |||||||||||| |||||||||||||||||||||    
T  93221 taaatagttaagggaccaaaaatacaatttagcc 93188  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11837 - 11873
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  11837 acctaaatagttaagggaccaaaaatgcaatttagcc 11873  T

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Target: scaffold0051 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40702 - 40738
Alignment:
Q  1 acctaaatagttaagagaccaaaaatacaatttagcc 37  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  40702 acctaaatagttaagggaccaaaaatgcaatttagcc 40738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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