View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_81 (Length: 250)
Name: NF2495_high_81
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_81 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 12642955 - 12643199
Alignment:
| Q |
1 |
ccaaagaaaaatgttgtattatccttagccattaaggtttttgcttaggcattaaggtctcatgatcctgtaagcaccgtgatgcagcaccgccgtttac |
100 |
Q |
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||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
12642955 |
ccaaagaaaaacgttgcattatccttagccattaaggtttttgcttaggcattaaggtctcatgatcctgtaagcaccgcgatgcagcaccgccgtttac |
12643054 |
T |
|
| Q |
101 |
tttctaagcatataagactttcttttcttaagtattaagtaactaagcctataaaagactatgctaataacctttcatgaatcaatattgcaaatcaatt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12643055 |
tttctaagcatataagacttgcttttcttaagtattaagtaactaagcctataaaagactatgctaataacctttcatgaatcaatattgcaaatcaatt |
12643154 |
T |
|
| Q |
201 |
tgtgaatgaaaatatagtgttgttgtaaaatctcttcttctctct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
12643155 |
tgtgaatgaaaatatagtgttgttgtaaaatctcttcttctctct |
12643199 |
T |
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