View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_high_95 (Length: 241)
Name: NF2495_high_95
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_high_95 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 30033150 - 30032925
Alignment:
| Q |
1 |
atataatttctattaaaggaaagaaagtagaaactccaatgtattccaattacttacacataattgagggaagtcattttagttaagtctggcaaagaac |
100 |
Q |
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| T |
30033150 |
atatcatttctattaaaggaaagaaagtagaaactccaatgtattccaattacttacacataattgagggaagtcattttagttaagtctggcaaagaac |
30033051 |
T |
|
| Q |
101 |
ctgacaaattgttgtgtgctaaattcctggaagaaaacagtatcgcataagtatccattgatgttattatgaaattcttttatatgtgtatatctcaaat |
200 |
Q |
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| T |
30033050 |
ctgacaaattgttgtgtgctaaattcctggaagaaaacagtattgcataaatatccattgatgttattatgaaattcttttatatgtgtatatatcaaat |
30032951 |
T |
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| Q |
201 |
ctaagtactcacaactcgttgatgtt |
226 |
Q |
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|||||||||||||| ||||||||||| |
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| T |
30032950 |
ctaagtactcacaattcgttgatgtt |
30032925 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 30044453 - 30044232
Alignment:
| Q |
6 |
atttctattaaaggaaagaaagtagaaactccaatgtattccaattacttacacataattgagggaagtcattttagttaagtctggcaaagaacctgac |
105 |
Q |
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|||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||||||| | |||| |||||||||||||||| ||||||| |
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| T |
30044453 |
atttctcttataggaaagaaagtagaaatgccaactcatgccaattacttacacataattgaggttatccattgatgttaagtctggcaaaggacctgac |
30044354 |
T |
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| Q |
106 |
aaattgttgtgtgctaaattcctggaagaaaacagtatcgcataagtatccattgatgttattatgaaattcttttatatgtgtatatctcaaatctaag |
205 |
Q |
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| T |
30044353 |
aaactgttgtgtgctaaattcctggaatgaagtaacactgtataattatccattgatgttattataaaatccttttatatatccgcgtctcaaatctaag |
30044254 |
T |
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| Q |
206 |
tactcacaactcgttgatgttg |
227 |
Q |
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||||||||| ||| |||||||| |
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| T |
30044253 |
tactcacaattcggtgatgttg |
30044232 |
T |
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