View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_low_112 (Length: 238)
Name: NF2495_low_112
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_low_112 |
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Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 222
Target Start/End: Complemental strand, 14779042 - 14778823
Alignment:
| Q |
3 |
gataatcaattttacaaaatttaagtttattcaaaatcatacagtaaagttaataaaaacatggattaaatttgataagaatatgtttttaacaggtgtt |
102 |
Q |
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| T |
14779042 |
gataatcaattttacaaaattgaagtttattcaaaatgacacagtaaagttgatgaatacatggattgaatttgataagaatatgtttttaacaggtgtt |
14778943 |
T |
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| Q |
103 |
aagaggtatggaaaaagttgcaggcttaggtggagtaactccatgtctgatccaaagcatgatgataagttcacatcccaagaagaagatctaattgtta |
202 |
Q |
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| T |
14778942 |
aaaaggtatggaaaaagttgcaggcttaggtggagtaactccatgtctgatccaaagcatgatgataagttcacatcccaagaagaagatctaattgtta |
14778843 |
T |
|
| Q |
203 |
agcttcatgcagccataggt |
222 |
Q |
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|||||||||||||||||||| |
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| T |
14778842 |
agcttcatgcagccataggt |
14778823 |
T |
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