View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_low_19 (Length: 450)
Name: NF2495_low_19
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 41289191 - 41289626
Alignment:
| Q |
1 |
tattgaagagggaacctatgagaaaccaaaagaaaaagttgttcgactctataactttagggactaaattagcgattcactgtgtatagttgggtatatt |
100 |
Q |
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| T |
41289191 |
tattgaagagggaacctatgagaaaccaaaagaaaaagttgttcgactctataactttagggactaaattagcgattcactgtgtatagttgggtatatt |
41289290 |
T |
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| Q |
101 |
ttagacagttgactgaaattgcataattgaccagtttctgcgtgtgtgaattattttggaagctggcatatactgannnnnnncagagatggtaaatact |
200 |
Q |
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| T |
41289291 |
ttagacagttgattgaaattgcataattgaccagtttctgcgtgtgtgaattattttggaagctggcatatactgatttttttcagagatggtaaatact |
41289390 |
T |
|
| Q |
201 |
tcatattaaaataagctctttccatttcttgttctgcttcaacatatgggagttataggtcatccaagcttttagtcagtgcttatttgttttgtagaac |
300 |
Q |
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| T |
41289391 |
tcatattaaaataagctctttccatttcttgttctgctttaacatatgggagttataggtcatccaagcttttagtcagtgtttatttgttttgtagaac |
41289490 |
T |
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| Q |
301 |
caaactcatgagtgtaaattcttacacatatcagtaacttacagaagcacattgagatactgaagtgttagctttctatatataacttatatgattgcaa |
400 |
Q |
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| T |
41289491 |
caaactcatgagtgtaaattcttacacatatcagtaacttacagaagcacattgagatactgaagtgttagctttctatatataacttatatgattgcaa |
41289590 |
T |
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| Q |
401 |
tttatatgagaaggtgacccagtctagggagataat |
436 |
Q |
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| T |
41289591 |
tttatatgagaaggtgacccagtctagggagataat |
41289626 |
T |
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