View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2495_low_97 (Length: 246)
Name: NF2495_low_97
Description: NF2495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2495_low_97 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 50153676 - 50153436
Alignment:
| Q |
1 |
ctttatacgtttcaaataaggacatatgttctacaacagaaaaacctttagactgacaaatgatttaaggagcttgtaaataaggcatagataaaaatta |
100 |
Q |
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| T |
50153676 |
ctttatacgtttcaaataaggacatatgttctacaacagaaaaagctttagactggccaatgatttaaggagcttgtaa-taaggcatagataaaaatta |
50153578 |
T |
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| Q |
101 |
ggcggtatactcattcattatggagtcactagaacccact--actatatatacatgtttcttgaacattttgtttggtttgtcttggtaaaatttacata |
198 |
Q |
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|||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
50153577 |
ggcggtatacccattcattatggagtcactagaacccactctactatatatacatgtttattgaacattttgtttggtttgtcttggtaaaatttacata |
50153478 |
T |
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| Q |
199 |
gcaagtccttcattgatttgtttcatccatatattagtataa |
240 |
Q |
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| T |
50153477 |
gcaagtccttcactgatttgtttcatccatatattagtataa |
50153436 |
T |
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