View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2496-Insertion-17 (Length: 144)
Name: NF2496-Insertion-17
Description: NF2496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2496-Insertion-17 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 137; Significance: 6e-72; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 137; E-Value: 6e-72
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 3352998 - 3353134
Alignment:
| Q |
8 |
cttaaaaaactacaaactccttaaagatcacgaaactcgtgcacgctcaaccattctcattcaatacaatacataagtacactagaaagtagaaacacta |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3352998 |
cttaaaaaactacaaactccttaaagatcacgaaactcgtgcacgctcaaccattctcattcaatacaatacataagtacactagaaagtagaaacacta |
3353097 |
T |
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| Q |
108 |
caaacaatgtccccaaaatattaactcttcaaaaaca |
144 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
3353098 |
caaacaatgtccccaaaatattaactcttcaaaaaca |
3353134 |
T |
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