View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2496_high_15 (Length: 266)

Name: NF2496_high_15
Description: NF2496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2496_high_15
NF2496_high_15
[»] chr4 (54 HSPs)
chr4 (120-260)||(38173517-38173659)
chr4 (118-260)||(3533275-3533419)
chr4 (119-259)||(13110522-13110664)
chr4 (118-260)||(34199237-34199381)
chr4 (118-259)||(6290560-6290703)
chr4 (120-260)||(33077842-33077983)
chr4 (118-260)||(55560447-55560591)
chr4 (119-260)||(8991744-8991887)
chr4 (122-260)||(52017308-52017450)
chr4 (119-253)||(33604618-33604754)
chr4 (143-260)||(16020832-16020951)
chr4 (119-260)||(48506574-48506717)
chr4 (119-260)||(3618422-3618564)
chr4 (119-260)||(40720996-40721139)
chr4 (119-260)||(56053978-56054120)
chr4 (118-260)||(13094358-13094502)
chr4 (118-260)||(23540394-23540538)
chr4 (155-260)||(2215250-2215357)
chr4 (119-260)||(28899293-28899436)
chr4 (155-260)||(46917479-46917586)
chr4 (155-263)||(35809160-35809270)
chr4 (118-260)||(45081379-45081524)
chr4 (118-260)||(48403867-48404012)
chr4 (118-260)||(31336322-31336466)
chr4 (119-260)||(33523231-33523375)
chr4 (143-260)||(16174983-16175102)
chr4 (119-260)||(19272745-19272887)
chr4 (155-260)||(4981506-4981613)
chr4 (166-260)||(18469336-18469432)
chr4 (189-260)||(27142298-27142369)
chr4 (119-260)||(39113724-39113866)
chr4 (118-260)||(52772714-52772857)
chr4 (155-259)||(17329881-17329987)
chr4 (155-260)||(27863712-27863819)
chr4 (166-255)||(23389901-23389993)
chr4 (166-260)||(53184065-53184160)
chr4 (162-260)||(31848743-31848842)
chr4 (155-260)||(39049052-39049158)
chr4 (155-260)||(54356865-54356971)
chr4 (166-260)||(34463992-34464087)
chr4 (155-260)||(47750194-47750299)
chr4 (157-260)||(53348029-53348134)
chr4 (155-254)||(34564121-34564221)
chr4 (174-260)||(55408537-55408625)
chr4 (155-260)||(12158135-12158241)
chr4 (163-260)||(40596731-40596829)
chr4 (166-255)||(51392239-51392327)
chr4 (155-260)||(10089845-10089950)
chr4 (155-255)||(19409128-19409229)
chr4 (154-260)||(39533250-39533357)
chr4 (118-255)||(39418293-39418427)
chr4 (155-255)||(33526714-33526815)
chr4 (166-262)||(55883-55979)
chr4 (163-263)||(36656566-36656664)
[»] chr1 (46 HSPs)
chr1 (118-260)||(48404287-48404431)
chr1 (118-260)||(48388076-48388220)
chr1 (118-260)||(51494440-51494584)
chr1 (118-260)||(31159344-31159488)
chr1 (118-260)||(36230314-36230458)
chr1 (123-263)||(37691255-37691396)
chr1 (118-260)||(45456119-45456263)
chr1 (118-260)||(2478297-2478440)
chr1 (155-260)||(31468127-31468234)
chr1 (118-259)||(45623499-45623642)
chr1 (150-260)||(19578877-19578990)
chr1 (118-260)||(23092726-23092870)
chr1 (155-260)||(27630428-27630535)
chr1 (139-260)||(29523681-29523804)
chr1 (155-260)||(37420312-37420419)
chr1 (155-260)||(45239132-45239239)
chr1 (119-260)||(29919328-29919472)
chr1 (123-259)||(14096653-14096791)
chr1 (139-253)||(30878518-30878635)
chr1 (119-260)||(37822527-37822671)
chr1 (166-260)||(37646528-37646624)
chr1 (130-260)||(8468293-8468425)
chr1 (155-260)||(8464093-8464199)
chr1 (157-260)||(33164408-33164513)
chr1 (155-260)||(44929259-44929365)
chr1 (163-263)||(47300462-47300564)
chr1 (166-263)||(10266925-10267022)
chr1 (166-260)||(44451239-44451334)
chr1 (166-260)||(44651078-44651173)
chr1 (155-260)||(17783371-17783477)
chr1 (155-244)||(44334283-44334374)
chr1 (129-232)||(35847117-35847222)
chr1 (155-260)||(41542324-41542428)
chr1 (155-255)||(48729316-48729417)
chr1 (165-260)||(51156856-51156952)
chr1 (121-263)||(43738940-43739084)
chr1 (166-260)||(52933737-52933832)
chr1 (166-260)||(52941372-52941467)
chr1 (141-260)||(17681229-17681352)
chr1 (130-245)||(3755011-3755128)
chr1 (166-251)||(51520222-51520310)
chr1 (166-260)||(643791-643886)
chr1 (155-255)||(36302976-36303077)
chr1 (143-199)||(20584882-20584938)
chr1 (118-213)||(45362675-45362772)
chr1 (157-255)||(40500396-40500494)
[»] chr7 (35 HSPs)
chr7 (119-256)||(40302463-40302602)
chr7 (118-260)||(33078753-33078897)
chr7 (118-260)||(42881318-42881462)
chr7 (120-263)||(22656629-22656774)
chr7 (119-260)||(47159463-47159605)
chr7 (119-260)||(36518476-36518618)
chr7 (129-260)||(39769700-39769833)
chr7 (123-260)||(37887812-37887951)
chr7 (141-260)||(30720103-30720224)
chr7 (155-260)||(5813095-5813202)
chr7 (120-256)||(37951709-37951849)
chr7 (166-260)||(35029077-35029173)
chr7 (143-260)||(30566585-30566704)
chr7 (118-260)||(33508494-33508639)
chr7 (155-260)||(32748794-32748901)
chr7 (155-260)||(45549587-45549694)
chr7 (129-260)||(20354194-20354327)
chr7 (141-260)||(22737564-22737684)
chr7 (155-260)||(26812110-26812218)
chr7 (129-263)||(38351550-38351686)
chr7 (143-260)||(28318012-28318130)
chr7 (156-260)||(32130238-32130345)
chr7 (154-260)||(43571062-43571170)
chr7 (166-260)||(22191228-22191322)
chr7 (157-260)||(25218777-25218881)
chr7 (166-260)||(21654854-21654949)
chr7 (166-255)||(35193093-35193183)
chr7 (166-254)||(25038568-25038657)
chr7 (166-260)||(24793499-24793594)
chr7 (166-260)||(30630783-30630878)
chr7 (166-260)||(48984915-48985010)
chr7 (155-260)||(38970028-38970136)
chr7 (155-244)||(114487-114578)
chr7 (155-263)||(43202102-43202215)
chr7 (165-255)||(26013173-26013263)
[»] chr3 (65 HSPs)
chr3 (123-260)||(41183240-41183379)
chr3 (119-260)||(6048664-6048807)
chr3 (118-263)||(29701643-29701790)
chr3 (119-260)||(50415798-50415941)
chr3 (118-260)||(36178672-36178817)
chr3 (119-254)||(55026701-55026838)
chr3 (118-260)||(32120406-32120550)
chr3 (118-260)||(27847370-27847514)
chr3 (118-260)||(30418398-30418541)
chr3 (118-260)||(50733977-50734121)
chr3 (118-260)||(50778734-50778878)
chr3 (119-256)||(44084271-44084410)
chr3 (127-256)||(52000034-52000165)
chr3 (118-254)||(6832345-6832483)
chr3 (141-260)||(10426399-10426520)
chr3 (119-260)||(51999204-51999348)
chr3 (155-260)||(5845108-5845215)
chr3 (155-260)||(17466513-17466620)
chr3 (155-260)||(25790743-25790850)
chr3 (155-260)||(26165522-26165629)
chr3 (119-260)||(38572122-38572265)
chr3 (118-260)||(4045941-4046085)
chr3 (119-260)||(20139322-20139466)
chr3 (155-260)||(47144171-47144278)
chr3 (129-260)||(11907991-11908124)
chr3 (118-232)||(43473851-43473967)
chr3 (118-260)||(48886954-48887093)
chr3 (143-260)||(42560887-42561006)
chr3 (121-260)||(138939-139081)
chr3 (129-260)||(12974640-12974774)
chr3 (118-260)||(46572894-46573037)
chr3 (155-260)||(25450603-25450709)
chr3 (155-260)||(42601759-42601865)
chr3 (128-256)||(46123897-46124027)
chr3 (157-260)||(51304338-51304443)
chr3 (119-225)||(37183840-37183948)
chr3 (166-260)||(25832693-25832788)
chr3 (154-260)||(35853160-35853268)
chr3 (166-260)||(37410388-37410483)
chr3 (166-260)||(41890543-41890638)
chr3 (166-260)||(42601474-42601569)
chr3 (154-260)||(49710357-49710465)
chr3 (166-260)||(49823139-49823234)
chr3 (166-260)||(15493791-15493884)
chr3 (166-255)||(51427109-51427199)
chr3 (155-255)||(35423983-35424084)
chr3 (119-212)||(7008017-7008112)
chr3 (154-260)||(28410391-28410499)
chr3 (154-260)||(43022645-43022753)
chr3 (155-255)||(33748683-33748784)
chr3 (166-260)||(33935000-33935094)
chr3 (118-260)||(28155194-28155340)
chr3 (155-230)||(49147287-49147363)
chr3 (119-260)||(47701031-47701174)
chr3 (155-260)||(49407306-49407412)
chr3 (155-223)||(35472631-35472701)
chr3 (217-260)||(37183031-37183074)
chr3 (166-244)||(49357481-49357561)
chr3 (155-229)||(50017051-50017126)
chr3 (166-221)||(7521145-7521201)
chr3 (205-260)||(42258376-42258432)
chr3 (143-203)||(53722093-53722153)
chr3 (163-202)||(744222-744261)
chr3 (163-202)||(50176113-50176152)
chr3 (189-263)||(30862763-30862838)
[»] scaffold0054 (2 HSPs)
scaffold0054 (118-260)||(57711-57855)
scaffold0054 (159-231)||(55068-55141)
[»] chr5 (43 HSPs)
chr5 (118-260)||(30648081-30648225)
chr5 (118-260)||(42806968-42807112)
chr5 (118-260)||(19241275-19241419)
chr5 (119-260)||(27942451-27942594)
chr5 (119-259)||(25670875-25671017)
chr5 (118-260)||(23089477-23089621)
chr5 (118-260)||(14278788-14278931)
chr5 (119-260)||(40888854-40888997)
chr5 (118-260)||(32976545-32976688)
chr5 (119-260)||(7650963-7651106)
chr5 (155-260)||(31013812-31013919)
chr5 (119-260)||(4219413-4219552)
chr5 (119-260)||(27407010-27407154)
chr5 (129-260)||(39008450-39008583)
chr5 (119-260)||(23649136-23649279)
chr5 (119-260)||(23809292-23809435)
chr5 (155-260)||(29618982-29619089)
chr5 (119-260)||(31008353-31008497)
chr5 (118-260)||(42317847-42317990)
chr5 (155-260)||(3454732-3454838)
chr5 (155-260)||(13479792-13479899)
chr5 (143-260)||(36572388-36572507)
chr5 (166-256)||(39238421-39238513)
chr5 (158-260)||(25652812-25652915)
chr5 (118-255)||(37882405-37882541)
chr5 (155-255)||(41263358-41263459)
chr5 (155-260)||(8176272-8176378)
chr5 (166-260)||(4577012-4577107)
chr5 (155-260)||(41152975-41153081)
chr5 (120-260)||(32363583-32363725)
chr5 (118-260)||(4938144-4938289)
chr5 (139-254)||(34529357-34529473)
chr5 (166-260)||(10569779-10569874)
chr5 (157-260)||(27407713-27407819)
chr5 (119-254)||(42608019-42608155)
chr5 (166-244)||(8681272-8681352)
chr5 (193-260)||(34709913-34709980)
chr5 (166-254)||(34918453-34918540)
chr5 (178-260)||(11954796-11954879)
chr5 (155-221)||(9274458-9274524)
chr5 (167-229)||(25032361-25032424)
chr5 (157-260)||(15972565-15972669)
chr5 (166-254)||(12912877-12912967)
[»] chr8 (43 HSPs)
chr8 (118-260)||(45100993-45101137)
chr8 (119-260)||(15053592-15053735)
chr8 (119-260)||(43525057-43525200)
chr8 (119-260)||(43524359-43524502)
chr8 (118-254)||(12272456-12272594)
chr8 (118-260)||(1958149-1958292)
chr8 (119-260)||(35931822-35931964)
chr8 (155-260)||(40283471-40283578)
chr8 (155-260)||(43618317-43618424)
chr8 (166-260)||(42859932-42860028)
chr8 (155-260)||(35099431-35099538)
chr8 (155-259)||(26244493-26244599)
chr8 (164-260)||(23549718-23549816)
chr8 (166-260)||(13947373-13947469)
chr8 (155-260)||(29731691-29731797)
chr8 (166-260)||(44503174-44503270)
chr8 (167-260)||(1634809-1634904)
chr8 (155-265)||(41477179-41477290)
chr8 (141-260)||(36912399-36912519)
chr8 (166-260)||(44149877-44149973)
chr8 (166-260)||(18029468-18029563)
chr8 (123-260)||(29637124-29637262)
chr8 (155-260)||(30470787-30470893)
chr8 (155-255)||(8609955-8610056)
chr8 (166-254)||(34955641-34955730)
chr8 (147-260)||(31129470-31129586)
chr8 (155-260)||(17741708-17741814)
chr8 (155-260)||(26632122-26632228)
chr8 (166-260)||(5212298-5212393)
chr8 (166-260)||(5735294-5735389)
chr8 (119-260)||(38206982-38207131)
chr8 (166-255)||(42860721-42860811)
chr8 (155-254)||(26749383-26749483)
chr8 (166-255)||(4625468-4625558)
chr8 (119-202)||(7511885-7511967)
chr8 (119-221)||(23353191-23353294)
chr8 (166-255)||(38584868-38584958)
chr8 (166-254)||(13814954-13815043)
chr8 (119-184)||(42859863-42859928)
chr8 (165-260)||(30289699-30289795)
chr8 (166-260)||(30532419-30532514)
chr8 (165-255)||(39811032-39811123)
chr8 (155-255)||(24431840-24431938)
[»] chr2 (34 HSPs)
chr2 (119-260)||(22351583-22351726)
chr2 (129-260)||(43021713-43021846)
chr2 (118-260)||(1073052-1073196)
chr2 (119-260)||(7588471-7588616)
chr2 (119-260)||(14382929-14383072)
chr2 (155-260)||(4296740-4296847)
chr2 (155-260)||(12855017-12855124)
chr2 (155-260)||(24997078-24997185)
chr2 (155-260)||(30822552-30822659)
chr2 (119-255)||(17929229-17929367)
chr2 (119-254)||(17485779-17485916)
chr2 (118-256)||(36526782-36526922)
chr2 (155-260)||(8852055-8852162)
chr2 (119-254)||(9117774-9117911)
chr2 (155-260)||(1308666-1308773)
chr2 (143-260)||(44279978-44280097)
chr2 (143-260)||(13151452-13151572)
chr2 (143-255)||(14152040-14152155)
chr2 (155-260)||(37245499-37245605)
chr2 (118-255)||(6362915-6363054)
chr2 (155-260)||(39490141-39490247)
chr2 (166-260)||(36209444-36209539)
chr2 (166-260)||(9074194-9074289)
chr2 (155-260)||(927861-927967)
chr2 (155-260)||(31192953-31193059)
chr2 (166-260)||(7763458-7763552)
chr2 (155-260)||(1987117-1987223)
chr2 (155-260)||(31174155-31174260)
chr2 (166-255)||(38901729-38901819)
chr2 (155-260)||(5146680-5146787)
chr2 (119-199)||(38997290-38997370)
chr2 (155-255)||(39433986-39434087)
chr2 (166-244)||(36855758-36855838)
chr2 (142-202)||(6333406-6333466)
[»] scaffold0362 (1 HSPs)
scaffold0362 (118-260)||(5291-5435)
[»] chr6 (25 HSPs)
chr6 (119-260)||(30446204-30446347)
chr6 (118-260)||(10883831-10883975)
chr6 (143-263)||(8660543-8660665)
chr6 (123-260)||(8669854-8669992)
chr6 (119-260)||(24348393-24348536)
chr6 (118-260)||(34838540-34838683)
chr6 (155-260)||(631514-631621)
chr6 (155-260)||(34328277-34328384)
chr6 (155-260)||(197800-197907)
chr6 (155-260)||(17961232-17961339)
chr6 (144-260)||(12512898-12513016)
chr6 (119-260)||(12501792-12501935)
chr6 (189-260)||(2503257-2503328)
chr6 (155-260)||(24933250-24933358)
chr6 (155-260)||(29428487-29428593)
chr6 (166-260)||(26654304-26654400)
chr6 (166-260)||(26760274-26760370)
chr6 (178-260)||(8218964-8219048)
chr6 (166-260)||(6380458-6380553)
chr6 (154-260)||(6725593-6725701)
chr6 (119-224)||(12480277-12480384)
chr6 (166-253)||(32359753-32359841)
chr6 (143-221)||(22627820-22627899)
chr6 (196-260)||(34242345-34242409)
chr6 (119-184)||(34242232-34242297)
[»] scaffold0016 (1 HSPs)
scaffold0016 (166-260)||(66040-66136)
[»] scaffold0012 (1 HSPs)
scaffold0012 (155-265)||(124012-124121)
[»] scaffold0100 (1 HSPs)
scaffold0100 (155-260)||(30507-30613)


Alignment Details
Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 38173517 - 38173659
Alignment:
Q  120 gaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcat 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||  ||||||||||||||||| ||||    
T  38173517 gaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcat 38173616  T
Q  218 tcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     ||||||||||||||||||||||||||||||||||||||||||    
T  38173617 ccaatttttacctctccaatggttttttcattcaacaccctac 38173659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 3533419 - 3533275
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  3533419 aagaccatttacaatggtaacaaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 3533320  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3533319 attcaatttttacctctccaatggttttttcattcaacaccctac 3533275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 259
Target Start/End: Original strand, 13110522 - 13110664
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattca 216  Q
    |||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||||||| |||| ||||||  ||||||||||||||||  ||    
T  13110522 agaccatttacaatggtcacaaatattcaacaacgcttaacacccactttttcaattcccaacactccacaacattttttctctcttaattcaacaccca 13110621  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacacccta 259  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13110622 ttcaatttttacctctccaatggttttttcattcaacacccta 13110664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 34199381 - 34199237
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  34199381 aagaccatttacaatggtaaaatacattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 34199282  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  34199281 attcaatttttacctctccaatgattttttcattcaacaccctac 34199237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 6290560 - 6290703
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  |    
T  6290560 aagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 6290659  T
Q  216 attcaatttttacctctccaatggttttttcattcaacacccta 259  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6290660 attcaatttttacctctccaatggttttttcattcaacacccta 6290703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 120 - 260
Target Start/End: Complemental strand, 33077983 - 33077842
Alignment:
Q  120 gaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcatt 218  Q
    |||||||||||||||| | | | |||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||| |||||| ||||  ||||    
T  33077983 gaccatttacaatggtaaaacaaattcaacaaccctcaatatccactttttcaatttccaacactccacatcattttctctctttaatttaacacccatt 33077884  T
Q  219 caatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33077883 caatttttacctctccaatggttttttcattcaacaccctac 33077842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 55560591 - 55560447
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||||||||||||||   | | |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||       
T  55560591 aagaccatttacaatgccaaaatatattcaacaactctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacct 55560492  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55560491 attcaatttttacctctccaatggttttttcattcaacaccctac 55560447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 8991744 - 8991887
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| ||||| ||||||||||||| ||||||||||||||  |||||||||||||  ||    
T  8991744 agaccatttacaatggtaatatacattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacaccca 8991843  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8991844 ttcaatttttacctctccaatggttttttcattcaacaccctac 8991887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 52017308 - 52017450
Alignment:
Q  122 ccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattc 219  Q
    |||||||||||||||||||||||||||||||||| |||| | | |||||||||||| ||||||  |||||||||  ||||||||||||||||| ||||||    
T  52017308 ccatttacaatggtcacaaatattcaacaacccttaacacctactttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattc 52017407  T
Q  220 aatttttacctctccaatggttttttca--ttcaacaccctac 260  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  52017408 aatttttacctctccaatggttttttcattttcaacaccctac 52017450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 33604618 - 33604754
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctct--cttaattcaacattca 216  Q
    |||||||||||||| ||   |||| ||||| ||||||||||| ||| ||||||||||||||||||| |||||||||||||||  |||||||||||| |||    
T  33604618 agaccatttacaatagttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacatcattttctctatcttaattcaacactca 33604717  T
Q  217 ttcaatttttacctctccaatggttttttcattcaac 253  Q
    |||||||||||||||||||||||||||||||||||||    
T  33604718 ttcaatttttacctctccaatggttttttcattcaac 33604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 16020832 - 16020951
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| ||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacctctccaatggt 16020931  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||||||||    
T  16020932 tttttcattcaacaccctac 16020951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 48506717 - 48506574
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | |||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||  |||||||||||||| |||    
T  48506717 agaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacatcattttctctctcttaattcaacactca 48506618  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||    
T  48506617 ttcaatttttaactctccaatggttttttcatgcaacactctac 48506574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 3618564 - 3618422
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |     
T  3618564 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccct 3618465  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  3618464 ttcaatttttacctctccaatggtttttt-attcaacaccctac 3618422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 40720996 - 40721139
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    |||||||||| |||||| | | | |||||||||   |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  ||    
T  40720996 agaccatttataatggtaaaatacattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 40721095  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  40721096 ttcaatttttacctctccaatggttttttcattcaacaccctac 40721139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 56053978 - 56054120
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||||||| |||  ||    
T  56053978 agaccatttacaatggttaaacatattcaacaacccttaacatccactttttcaattcccaacactccacatcattttctctctcttaattctacaccca 56054077  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||    
T  56054078 ttcaattttt-cctctccaatgattttttcattcaacactctac 56054120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 13094502 - 13094358
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||| ||||||||  | |||| ||||| | || |||||| ||||||||||||||||||||||| |||||||||||||||||  ||||||||||  |    
T  13094502 aagaccatgtacaatgggaaaaaattttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctcataattcaacaccc 13094403  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||    
T  13094402 attcaatttttatctctccaatagttttttcattcaacaccctac 13094358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 23540538 - 23540394
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||| |||||||||||| | | ||||||||||||| |||||| ||| |||||||||| ||||||||  ||||||||||||||||  ||||||||||  |    
T  23540538 aagactatttacaatggttaaacatattcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacaccc 23540439  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  23540438 attcaatttttacctctccaatgattttttcattcaacactctac 23540394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 2215357 - 2215250
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2215357 tcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattcaa 2215258  T
Q  253 caccctac 260  Q
    ||||||||    
T  2215257 caccctac 2215250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 28899293 - 28899436
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    ||||||||||||||||| | | | |||||||||||||||||| ||| ||||||||||||||| | | |||||| |||||||  |||||||||||||  ||    
T  28899293 agaccatttacaatggttaaacacattcaacaaccctcaacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacaccca 28899392  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||    
T  28899393 ttcaatttttacctctctaatggttttttcattcaacactctac 28899436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 46917586 - 46917479
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  46917586 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaa 46917487  T
Q  253 caccctac 260  Q
    ||||||||    
T  46917486 caccctac 46917479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 263
Target Start/End: Original strand, 35809160 - 35809270
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  35809160 tcaacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaa 35809259  T
Q  253 caccctactcc 263  Q
    |||||||||||    
T  35809260 caccctactcc 35809270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 45081524 - 45081379
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||| ||||||||  | | || ||||| | || |||||| ||| ||||||||||||||||||| |||||||||||||||||  |||||||||| ||    
T  45081524 aagaccatgtacaatgggaaaatattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactc 45081425  T
Q  216 attcaatttttacctctccaatggtt-ttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  45081424 attcaatttttacctctccaatggtttttttcattcaacaccctac 45081379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 48404012 - 48403867
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||| | ||||||| |||||| ||||| | || ||||||| || |||||||||| |||||||| |||||||||||||||||  |||||||||| ||    
T  48404012 aagaccatgtgcaatggttacaaattttcaatacccttcaacattcactttttcaatttccaacactccacatcattttctctctcataattcaacactc 48403913  T
Q  216 attcaatttttacctctccaatggtttttt-cattcaacaccctac 260  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||    
T  48403912 attcaatttttacctctccaatgattttttccattcaacaccctac 48403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 31336466 - 31336322
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||||||||| |||||| | | |||||||||||||||||| | | ||||||||||||| ||||||| ||| |||||||||||||  ||||||||||  |    
T  31336466 aagaccatttataatggttaaacatattcaacaaccctcaatacctattttttcaattctcaacactccacgtcattttctctctcttaattcaacaccc 31336367  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     |||||||||||||||||||| |||||||||||||||||| ||||    
T  31336366 tttcaatttttacctctccaaaggttttttcattcaacactctac 31336322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 33523231 - 33523375
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    |||||||||||||||||   |||| ||||| ||||||||||||||| ||||||||||||||||| | ||||||||||  |||||||||||||||||| ||    
T  33523231 agaccatttacaatggttgaaaattttcaataaccctcaacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatcca 33523330  T
Q  217 ttcaa-tttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| |||||| |||||||||| |||||| ||||||||| ||||    
T  33523331 ttcaattttttatctctccaatgatttttttattcaacactctac 33523375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 16175102 - 16174983
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| |||||| ||||||||||||||  ||||||| ||||||||||||||  |||||||||||||  | ||||||||||||||||||||| ||    
T  16175102 attcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacaccctttcaatttttacctctccaatagt 16175003  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||||||||    
T  16175002 tttttcattcaacaccctac 16174983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 19272745 - 19272887
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||||||||||||  | |||| ||||| | || |||||||  | ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||    
T  19272745 agaccatttacaatggaaaaaaat-ttcaatacccttcaacatttactttttcaattcccaacactccacatcattttctctctcataattcaacatcca 19272843  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||    
T  19272844 ttcaatttttatctctccaatagttttttcattcaacatcctac 19272887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 4981506 - 4981613
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  ||||||||||   ||| |||||||||||||||||| ||||||||||||||    
T  4981506 tcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacacctatttaatttttacctctccaatagttttttcattcaa 4981605  T
Q  253 caccctac 260  Q
    ||||||||    
T  4981606 caccctac 4981613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 18469432 - 18469336
Alignment:
Q  166 tttttcaattcccaacacttcacatcatttt---ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  18469432 tttttcaattcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacctctccaatggt-ttttcattcaacactctac 18469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 27142369 - 27142298
Alignment:
Q  189 atcattttctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  27142369 atcattttctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaacaccctac 27142298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 39113866 - 39113724
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcat 217  Q
    ||||||||||||||||| | ||| |||||||||| |||||||   | ||||||||||||||||||| |||||||||||||||| || |||||||| ||||    
T  39113866 agaccatttacaatggtgaaaaacattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctcttttattcaacactcat 39113767  T
Q  218 tcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    |||| ||||||| | | |||||| ||||||||||||||| ||||    
T  39113766 tcaacttttaccattttcaatgg-tttttcattcaacactctac 39113724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 52772714 - 52772857
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctctt--aattcaacattc 215  Q
    |||||||| ||||||||| |   | ||||||||||| | |||| |||||||||||||||  |||||| ||||| ||||||||||||  |||||||||  |    
T  52772714 aagaccatgtacaatggtaaaccaaattcaacaacctttaacacccattttttcaattct-aacactccacattattttctctcttttaattcaacaccc 52772812  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     ||||||||||| ||||||||| ||||||||||||||||||||||    
T  52772813 tttcaatttttatctctccaatagttttttcattcaacaccctac 52772857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 17329987 - 17329881
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt-acctctccaatggttttttcattca 251  Q
    |||||||||| |||||||||||| |||| | |||||||||||||||||  |||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  17329987 tcaacatccactttttcaattcc-aacattccacatcattttctctctcataattcaacatctattcaattttttacctccccaatggttttttcattca 17329889  T
Q  252 acacccta 259  Q
    ||||||||    
T  17329888 acacccta 17329881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 27863712 - 27863819
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctctta--attcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| | ||||||||||||| ||||||| ||| ||||||||||| |||  ||||||||| |||||||||||||||||||||||  |||||||||||||    
T  27863712 tcaacacctattttttcaattctcaacactccacgtcattttctctgttataattcaacatccattcaatttttacctctccaataattttttcattcaa 27863811  T
Q  253 caccctac 260  Q
    ||| ||||    
T  27863812 cactctac 27863819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 23389993 - 23389901
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggtt-ttttcattcaacac 255  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||| | |||||||||| ||||||||||||||||| ||||||||||||||    
T  23389993 tttttcaattcccaacactccacattattttctctctcataattcaatactcattcaattgttacctctccaatggtttttttcattcaacac 23389901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 53184160 - 53184065
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||| ||||||||||||||| ||||    
T  53184160 tttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctccaatgg-tttttcattcaacactctac 53184065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 31848842 - 31848743
Alignment:
Q  162 ccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacacccta 259  Q
    |||||||||||||| |||||||| ||||||||||||||||| | |||||||| ||||||||  |||| |||||||||||| ||||||||||||||| |||    
T  31848842 ccattttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatgg-tttttcattcaacactcta 31848744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 39049158 - 39049052
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||| |||| |||||||| ||||||||||||||| | | ||||||||||||||||| ||||| ||||||| |||| ||||||||||||    
T  39049158 tcaacatccacttttttaatttccaacactccacatcattttctctttcttattcaacattcattcaacttttaccctctccgatgg-tttttcattcaa 39049060  T
Q  253 caccctac 260  Q
    ||| ||||    
T  39049059 cactctac 39049052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 54356971 - 54356865
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||| | ||||||||  ||||||| |||||| ||||| ||||| ||||||||||||    
T  54356971 tcaacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctctctaatgg-tttttcattcaa 54356873  T
Q  253 caccctac 260  Q
    ||| ||||    
T  54356872 cactctac 54356865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 34464087 - 34463992
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| |||| |||||| |||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||||||| |||||    
T  34464087 ttttttaatttccaacatttcacatcattttctctctcttaattcaacaccctttcaatttttacctctccaatag-tttttcattcaacatcctac 34463992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 47750299 - 47750194
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||||| | |||||||| |||||||| ||||| |||||||||| | ||||||||||||    
T  47750299 tcaacatccactttttcaattccc-acactccacgtcattttctctctcttattcaacactcattcaacttttaccctctccaat-gatttttcattcaa 47750202  T
Q  253 caccctac 260  Q
    ||| ||||    
T  47750201 cactctac 47750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 53348134 - 53348029
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaac 253  Q
    |||||||| ||||||||||  ||||| |||||||||||||||  ||||| |||||||| ||||| || ||||| |||||||||| | |||||||||||||    
T  53348134 aacatccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaat-gatttttcattcaac 53348036  T
Q  254 accctac 260  Q
    |||||||    
T  53348035 accctac 53348029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 254
Target Start/End: Original strand, 34564121 - 34564221
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||||||||| ||||| |||||||| | || ||||||||||| | |||||||||||||| || ||||| ||||| |||||||||||| ||||||    
T  34564121 tcaacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctcttcaatggtttttt-attcaa 34564219  T
Q  253 ca 254  Q
    ||    
T  34564220 ca 34564221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 260
Target Start/End: Complemental strand, 55408625 - 55408537
Alignment:
Q  174 ttcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    |||||| |||| ||||||||||||||||| | |||||||| |||||||| ||||||  |||||||| ||||||||||||||||| ||||    
T  55408625 ttcccagcactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatagttttttcattcaacactctac 55408537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 12158135 - 12158241
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    ||||||||||  ||||| |||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| | | | |||||| ||||||||||||    
T  12158135 tcaacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaacttttatctttttcaatgg-tttttcattcaa 12158233  T
Q  253 caccctac 260  Q
    ||| ||||    
T  12158234 cactctac 12158241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 40596829 - 40596731
Alignment:
Q  163 cattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||  ||||||| ||| |||||||||||| || |||||||| | |||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  40596829 cattttttcaattttcaacactccacgtcattttctctcttttattcaacacttattcaacttttactctctccaatgg-tttttcattcaacactctac 40596731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 51392239 - 51392327
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    ||||| ||||| ||||||| ||||||||||| |||||| ||||||||||| ||||| ||||| ||||| |||||| |||||||||||||||    
T  51392239 ttttttaattctcaacactccacatcattttttctctt-attcaacattcgttcaacttttaccctcttcaatgg-tttttcattcaacac 51392327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 10089845 - 10089950
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatca-ttttctctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||  ||| ||| ||||||| ||||||||||| |||||||| |||||||| ||||| |||||||||| | ||||||||||||    
T  10089845 tcaacacccactttttcaattttcaatactccacatcatttttctctctt-attcaacactcattcaacttttaccctctccaat-gatttttcattcaa 10089942  T
Q  253 caccctac 260  Q
    ||| ||||    
T  10089943 cactctac 10089950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 19409128 - 19409229
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||| |||||||||| |||| |||  |||| ||||||||||| | |||||| |||||||||| ||||| | |||||||||| ||||||||||||    
T  19409128 tcaacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattcattcaacttttatcatctccaatgg-tttttcattcaa 19409226  T
Q  253 cac 255  Q
    |||    
T  19409227 cac 19409229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 39533357 - 39533250
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattca 251  Q
    ||||||| ||| |||||||||| |||| | | ||| ||||||||||| | | ||||||||||||||||| ||||||| ||| |||| | |||||||||||    
T  39533357 ctcaacacccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttaccatctacaat-gatttttcattca 39533259  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  39533258 acactctac 39533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 39418427 - 39418293
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctcttaattcaacattcat 217  Q
    |||| |||||| |||| | | ||| |||||||||| || ||||| |||||||||||||| ||||| | |||||  || ||||| || ||| |||||| ||    
T  39418427 aagatcatttataatgttgaaaaacattcaacaacacttaacattcattttttcaattctcaacattccacat--ttctctct-tttatttaacatttat 39418331  T
Q  218 tcaatttttac-ctctccaatggttttttcattcaacac 255  Q
    ||||||||||| |||| |||| | |||||||||||||||    
T  39418330 tcaatttttactctcttcaatag-tttttcattcaacac 39418293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 33526714 - 33526815
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||| ||||||| |  |||||||||| || || |||||| | |||||||| ||||| ||||||||||   ||||||||||||    
T  33526714 tcaacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctccaat-aatttttcattcaa 33526812  T
Q  253 cac 255  Q
    |||    
T  33526813 cac 33526815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 262
Target Start/End: Complemental strand, 55979 - 55883
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctactc 262  Q
    |||||||||| |||||||| | ||||||||||| ||| | ||||||| |||||| | ||||  | ||| |||||| ||||||||||||||| ||||||    
T  55979 tttttcaatttccaacactccgcatcattttctttctcttattcaactttcattaacttttatcatcttcaatgg-tttttcattcaacactctactc 55883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 36656566 - 36656664
Alignment:
Q  163 cattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||   ||||| ||||||||||||||||| | | |||| | |||||||| |||||| |||||| || | ||||||||||||||| ||||    
T  36656566 cattttttcaattc---acactccacatcattttctctctcttaatcaatactcattcaacttttacactctccgat-gatttttcattcaacactctac 36656661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 2e-55; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 48404287 - 48404431
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||||  ||||||||||||||||| ||    
T  48404287 aagaccatttacaatggtcacaaatattcaacaaccctcaacaccaactttttcaattcccaacactccacatcattttctctctcttaattcaacactc 48404386  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  48404387 attcaatttttacctctccaatgattttttcattcaacaccctac 48404431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 48388220 - 48388076
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| || |||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  48388220 aagaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 48388121  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48388120 attcaatttttacctctccaatggttttttcattcaacaccctac 48388076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 51494584 - 51494440
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||||||||||||| | | ||||||||||||| |||||| ||| ||||| ||||| ||||||| |||||||||||||||||  |||||||||||||    
T  51494584 aagaccatttacaatggtaaaatatattcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacattc 51494485  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  51494484 attcaatttttacctctccaatggttttttcattcaacaccctac 51494440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 31159344 - 31159488
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    ||||||||||||||||||   |||  ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||  |||||||||||||  |    
T  31159344 aagaccatttacaatggttgaaaagtttcaacaaccctcaacatctactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 31159443  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31159444 attcaatttttacctctccaatggttttttcattcaacaccctac 31159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 36230314 - 36230458
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattc 215  Q
    |||| ||||||||||||| | | | |||||||||||||||||| | | |||||||||||||||||||||||||||||||  ||||||||||||||||  |    
T  36230314 aagatcatttacaatggttaaacacattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacaccc 36230413  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36230414 attcaatttttacctctccaatggttttttcattcaacactctac 36230458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 123 - 263
Target Start/End: Complemental strand, 37691396 - 37691255
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattca 220  Q
    |||||||||||| || | ||||||||||| ||||| ||| || ||||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||||    
T  37691396 catttacaatgg-caaatatattcaacaatcctcatcattcactttttcaattcccaacactccacattattttctctctcttaattcaacatccattca 37691298  T
Q  221 atttttacctctccaatggttttttcattcaacaccctactcc 263  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37691297 atttttacctctccaatggttttttcattcaacaccctactcc 37691255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 45456263 - 45456119
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||||||||||||||||   |||| ||||| ||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||  |||||||||| ||    
T  45456263 aagaccatttacaatggttgaaaattttcaataaccctcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactc 45456164  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  45456163 attcaatttttacctctccaatggatttttcattcaacactctac 45456119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 2478440 - 2478297
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  2478440 aagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 2478341  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     ||||||||||||||||||||||||||||| ||||||||||||||    
T  2478340 tttcaatttttacctctccaatggtttttt-attcaacaccctac 2478297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 31468127 - 31468234
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31468127 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaatttttacctctccaatagttttttcattcaa 31468226  T
Q  253 caccctac 260  Q
    ||||||||    
T  31468227 caccctac 31468234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 118 - 259
Target Start/End: Complemental strand, 45623642 - 45623499
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||  | | |||||||||||| ||||||||| | |||||||||||| |||||| |||||||||||||  |||||||||||||| ||    
T  45623642 aagaccatttacaatggcaaaatatattcaacaactctcaacatctactttttcaattcctaacactccacatcattttctctctcttaattcaacactc 45623543  T
Q  216 attcaatttttacctctccaatggttttttcattcaacacccta 259  Q
    ||| |||||||| |||||| ||||||||||||||||||||||||    
T  45623542 atttaatttttatctctcctatggttttttcattcaacacccta 45623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 260
Target Start/End: Complemental strand, 19578990 - 19578877
Alignment:
Q  150 aaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaatttttacctctccaa-tggttttttc 246  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  19578990 aaccctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaattggttttttc 19578891  T
Q  247 attcaacaccctac 260  Q
    ||||||||||||||    
T  19578890 attcaacaccctac 19578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 23092726 - 23092870
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    |||||||||||||||||  | | |||||||| | ||||||||| ||| ||||||||||||||||||| ||| ||||||||||  |||||||||||||  |    
T  23092726 aagaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacgtcattttctctctcttaattcaacaccc 23092825  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  23092826 attcagtttttacctctccaatgattttttcattcaacaccctac 23092870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 27630535 - 27630428
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  27630535 tcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaa 27630436  T
Q  253 caccctac 260  Q
    ||||||||    
T  27630435 caccctac 27630428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 29523681 - 29523804
Alignment:
Q  139 aaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaa 236  Q
    |||| ||||||| || |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||| |||||||    
T  29523681 aaattttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacatctccaa 29523780  T
Q  237 tggttttttcattcaacaccctac 260  Q
    || |||||||||||||||||||||    
T  29523781 tgattttttcattcaacaccctac 29523804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 37420419 - 37420312
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  37420419 tcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaa 37420320  T
Q  253 caccctac 260  Q
    ||||||||    
T  37420319 caccctac 37420312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 45239132 - 45239239
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  45239132 tcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaacactcattcaatttttacctctccaatggttttttcattcaa 45239231  T
Q  253 caccctac 260  Q
    ||||||||    
T  45239232 caccctac 45239239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 29919328 - 29919472
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||  | | ||||||||||| |||||||||| | ||||||||||||||||||| || |||||||  |||||||||||||||||   |    
T  29919328 agaccatttacaatggcaaaatatattcaacaaacctcaacatctactttttcaattcccaacactccatatcattttctctctcttaattcaacaccta 29919427  T
Q  217 ttcaa-tttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||    
T  29919428 ttcaattttttacctctccaatggttttttcattcaacactctac 29919472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 123 - 259
Target Start/End: Original strand, 14096653 - 14096791
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattca 220  Q
    ||||||||||||  | | ||||||||||| | |||||| | | ||||||||||||||||||| || ||||||||  |||||||||||||||| |||||||    
T  14096653 catttacaatggcaaaatatattcaacaatcttcaacacctactttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattca 14096752  T
Q  221 atttttacctctccaatggttttttcattcaacacccta 259  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  14096753 atttttacctctccaataattttttcattcaacacccta 14096791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 253
Target Start/End: Complemental strand, 30878635 - 30878518
Alignment:
Q  139 aaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaatttttacctctccaa 236  Q
    |||| ||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  30878635 aaattttcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaa 30878536  T
Q  237 t-ggttttttcattcaac 253  Q
    | | ||||||||||||||    
T  30878535 tagtttttttcattcaac 30878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 37822527 - 37822671
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc---ttaattcaacattc 215  Q
    |||||||||||||||||   |||| ||||| |||||| ||||  || ||||||||||| ||||||| ||||||||||||||||   ||||||||||| ||    
T  37822527 agaccatttacaatggttgaaaattttcaataaccctgaacactcactttttcaattctcaacactccacatcattttctctcctcttaattcaacactc 37822626  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  37822627 attcaatttttacctctccaatgattttttctttcaacactctac 37822671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 37646624 - 37646528
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||||||||| |||||||||||||||||  ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  37646624 ttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgattttttcattcaacaccctac 37646528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 260
Target Start/End: Original strand, 8468293 - 8468425
Alignment:
Q  130 aatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattcaattttta 227  Q
    |||||| | ||| |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  |||| || |||||    
T  8468293 aatggttaaaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaactttta 8468392  T
Q  228 cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||  ||| | |||||||||||||| ||||    
T  8468393 cctctctgatgatattttcattcaacactctac 8468425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 8464093 - 8464199
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  8464093 tcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctctccaatgg-tttttcattcaa 8464191  T
Q  253 caccctac 260  Q
    ||| ||||    
T  8464192 cactctac 8464199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 33164408 - 33164513
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaaca 254  Q
    |||| ||| ||||||||||||||||| | || || |||||  |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  33164408 aacacccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaatttttacatctccaatgattttttcattcaaca 33164507  T
Q  255 ccctac 260  Q
    ||||||    
T  33164508 ccctac 33164513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 44929365 - 44929259
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  44929365 tcaacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaa 44929267  T
Q  253 caccctac 260  Q
    ||| ||||    
T  44929266 cactctac 44929259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 47300564 - 47300462
Alignment:
Q  163 cattttttcaattcccaacacttcacatcattttctctctt--aattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||| || |||| ||||||||||||||||||  |||||||||  |||||||||||||| | ||||||| |||||||||||||||| ||||    
T  47300564 cattttttcaattctcagcactccacatcattttctctcttttaattcaacacacattcaatttttacttttccaatgattttttcattcaacactctac 47300465  T
Q  261 tcc 263  Q
    |||    
T  47300464 tcc 47300462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 263
Target Start/End: Complemental strand, 10267022 - 10266925
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctactcc 263  Q
    |||||||||| ||| || | || |||||||| |||||||||| || || ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  10267022 tttttcaatttccaccattacagatcattttttctcttaatttaatatacattcaatttttacctctctaatggttttttcattcaacactctactcc 10266925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 44451334 - 44451239
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  44451334 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 44451239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 44651078 - 44651173
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  44651078 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 44651173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 17783371 - 17783477
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||| ||||||||||| | ||||||||||||||||| | |||||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  17783371 tcaacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctctccaatgg-tttttcattcaa 17783469  T
Q  253 caccctac 260  Q
    ||| ||||    
T  17783470 cactctac 17783477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 44334283 - 44334374
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttt 244  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||| | |||||||| |||||||| |||||| ||||||||||||||||    
T  44334283 tcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctctccaatggttttt 44334374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 35847222 - 35847117
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| | || |||||||||| ||||| |||| |||||||| |||||||||||||||||  ||||||||||  ||||||||||||    
T  35847222 caatggttacaaattttcaatatccttcaacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaattttt 35847123  T
Q  227 acctct 232  Q
    ||||||    
T  35847122 acctct 35847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 41542324 - 41542428
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||| | |||||||  |||||||| ||||| |||||||||||| ||||||||||||    
T  41542324 tcaacatccactttttcaattcccaacactccacatcatattctctctcttattcaac--tcattcaacttttatcctctccaatgg-tttttcattcaa 41542420  T
Q  253 caccctac 260  Q
    ||| ||||    
T  41542421 cactctac 41542428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 48729316 - 48729417
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||||||||||||||   |||||||||||||||||||||| | | ||||||||  ||||||| ||||| |||||||||||| ||||||||||||    
T  48729316 tcaacatccattttttcaatttttaacacttcacatcattttctctttcttattcaacacacattcaacttttaccctctccaatgg-tttttcattcaa 48729414  T
Q  253 cac 255  Q
    |||    
T  48729415 cac 48729417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 51156952 - 51156856
Alignment:
Q  165 ttttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||  ||||||| ||  |||||||||||||  ||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||    
T  51156952 ttttttcaattttcaacactccatgtcattttctctctcataatttaacacccattcaatttt-acctctccaatggttttttcattcaacaccctac 51156856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 263
Target Start/End: Original strand, 43738940 - 43739084
Alignment:
Q  121 accatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatca--ttttctctcttaattcaacattcatt 218  Q
    ||||||||| ||||| | | | ||||||||||  ||| ||| |||||||||||||  |||||||  || | |  |||||||| ||||||||||| | |||    
T  43738940 accatttacgatggttaaacacattcaacaactttcagcattcattttttcaattttcaacactctacgttattttttctcttttaattcaacacttatt 43739039  T
Q  219 caatttttacctctccaatggttttttcattcaacaccctactcc 263  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||||    
T  43739040 caatttttacctcttaaatggttttttcatttaacactctactcc 43739084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 52933832 - 52933737
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| |||||| ||| ||||||||||||| | |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  52933832 tttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatgg-tttttcattcaacactctac 52933737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 52941467 - 52941372
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| |||||| ||| ||||||||||||| | |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  52941467 tttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatgg-tttttcattcaacactctac 52941372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 17681352 - 17681229
Alignment:
Q  141 atattcaacaaccctcaacatccattttttcaattcccaacacttc-acatcattttctctct----taattcaacattcattcaatttttacctctcca 235  Q
    ||||||||||||| |||||||||| ||||||||||  |||||||   ||||||||||||||||    |  |||||||| |||||||||||||||||| ||    
T  17681352 atattcaacaaccttcaacatccagtttttcaattatcaacactcagacatcattttctctctctcttggttcaacatccattcaatttttacctctaca 17681253  T
Q  236 atggttttttcattcaacaccctac 260  Q
    | | |||||||||||||||| ||||    
T  17681252 a-gattttttcattcaacactctac 17681229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 3755128 - 3755011
Alignment:
Q  130 aatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta- 227  Q
    |||||| | ||| |||||||| |  ||| |||||| ||||||||||| |||||||  |||||||||||||||| | |||||||||||| |||| |||||     
T  3755128 aatggtaaaaaacattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttac 3755029  T
Q  228 cctctccaatggtttttt 245  Q
    |||||||||| |||||||    
T  3755028 cctctccaatagtttttt 3755011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 51520222 - 51520310
Alignment:
Q  166 tttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacc-tctccaatggttttttcattca 251  Q
    ||||||||||  ||||||| |||||||||||  ||||||||||| |||| | |||||| ||||||| ||||||||||||||||||||||    
T  51520222 tttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccctctccaatggttttttcattca 51520310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 643886 - 643791
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||| ||||||||||||| | |||||||| ||||||||  |||| |||||| ||||| ||||||||||||||| ||||    
T  643886 tttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctcaaatgg-tttttcattcaacactctac 643791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 36302976 - 36303077
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||||||||||||||  ||||||| ||||| ||||||||| | | ||||||||   |||||| ||||| |||||||||||| ||||||||||||    
T  36302976 tcaacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctccaatgg-tttttcattcaa 36303074  T
Q  253 cac 255  Q
    |||    
T  36303075 cac 36303077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 20584938 - 20584882
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc 199  Q
    |||||||||  |||||||  || ||||||||||||||||||| ||||||||||||||    
T  20584938 attcaacaaaactcaacacacactttttcaattcccaacactccacatcattttctc 20584882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 45362675 - 45362772
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc--ttaattcaacat 213  Q
    |||| ||||||| ||| | | |||| ||||| | || |||||| ||||||||||||||| ||||||| || |||| ||||||||  ||||||||||||    
T  45362675 aagatcatttactatgctaaaaaattttcaatacccttcaacacccattttttcaattctcaacactccaaatcactttctctctattaattcaacat 45362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 40500396 - 40500494
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    |||| ||| ||||||| |||| |||||||||||| |||||||| || | |||||||| ||||| || ||||| |||||||| ||| ||||||||||||||    
T  40500396 aacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctctccagtgg-tttttcattcaaca 40500493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 40302602 - 40302463
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||    
T  40302602 agaccatttacaatggtcacaaatattcaacaatcctcgacacccattttttcaattcccaacactccacatcattttctctctcttaattcaacactca 40302503  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacacc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40302502 ttcaatttttacctctccaatggttttttcattcaacacc 40302463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 33078897 - 33078753
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||||||||||||| | | |||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||||  |||||||||||||    
T  33078897 aagaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattc 33078798  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  33078797 attcaatttttacctctccaatagttttttcattcaacactctac 33078753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 42881318 - 42881462
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||  |   |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||       
T  42881318 aagaccatttacaatggcaaattatattcaacaaccctcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacca 42881417  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42881418 attcaatttttacctctccaatggttttttcattcaacaccctac 42881462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 120 - 263
Target Start/End: Original strand, 22656629 - 22656774
Alignment:
Q  120 gaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc--ttaattcaacattcat 217  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||  ||||||||||||||||  |||||||||||| |||    
T  22656629 gaccatttacaatggtcacaaatattcaacaaaccttaacatccatttttttaattcctaacacgccacatcattttctctcttttaattcaacatccat 22656728  T
Q  218 tcaatttttacctctccaatggttttttcattcaacaccctactcc 263  Q
    | ||||||||||||| |||||||||||| ||||||||| |||||||    
T  22656729 ttaatttttacctcttcaatggtttttttattcaacactctactcc 22656774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 47159605 - 47159463
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||||||| ||||| ||||||||||||| |||||||||||||||||  ||||||||||  ||    
T  47159605 agaccatttacaatggtaaaatacattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctcttaattcaacaccca 47159507  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47159506 ttcaatttttacctctccaatggttttttcattcaacaccctac 47159463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 36518476 - 36518618
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | |||||| |||| |||||| ||| ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||    
T  36518476 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactca 36518575  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  36518576 ttcaatttttacctctccaatggtttttt-attcaacaccctac 36518618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 39769700 - 39769833
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| |||| |||||| ||| |||||||||| |||||||| |||||||||||||||||  |||||||||| |||||||||||||    
T  39769700 caatggttacaaattttcaataaccttcaacacccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaattttt 39769799  T
Q  227 acctctccaatggttttttcattcaacaccctac 260  Q
    ||||||| ||||||||||||||||||||||||||    
T  39769800 acctctctaatggttttttcattcaacaccctac 39769833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 37887812 - 37887951
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattca 220  Q
    ||||||||||||| | | | ||||||||| | |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||| |    
T  37887812 catttacaatggtaaaataaattcaacaatcttcaacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccattta 37887911  T
Q  221 atttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| |||| ||||||||||||||||| ||||    
T  37887912 atttttacctcttcaatagttttttcattcaacactctac 37887951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 30720103 - 30720224
Alignment:
Q  141 atattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatg 238  Q
    |||||||||||||||||||| | | |||||||||| |||||||| ||||||||||||||  |||||||||||||  |||||||||||||||||| |||||    
T  30720103 atattcaacaaccctcaacacctactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctcttcaatg 30720202  T
Q  239 gttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||    
T  30720203 gttttttcattcaacaccctac 30720224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 5813095 - 5813202
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5813095 tcaacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaatttttacctctccaatggttttttcattcaa 5813194  T
Q  253 caccctac 260  Q
    ||||||||    
T  5813195 caccctac 5813202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 256
Target Start/End: Original strand, 37951709 - 37951849
Alignment:
Q  120 gaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttc----tctcttaattcaacattc 215  Q
    |||||||||||||||| | | | ||||||||||| |||||| | | ||||||||||||||||||| || |||||||||    |||||||||||||||  |    
T  37951709 gaccatttacaatggtaaaatacattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacaccc 37951808  T
Q  216 attcaatttttacctctccaatggttttttcattcaacacc 256  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  37951809 attcaatttttacctctccaatggttttttcattcaacacc 37951849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 35029173 - 35029077
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||| | |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  35029173 tttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattcaacaccctac 35029077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 30566585 - 30566704
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||| |||||||| ||| ||||||||||| ||||||| ||||||||||||||  ||||||||||||| |||||||||||||| ||||||||| ||    
T  30566585 attcaacaatcctcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaatttttatctctccaatagt 30566684  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||| ||||    
T  30566685 tttttcattcaacactctac 30566704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 33508639 - 33508494
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccatttttt-caattcccaacacttcacatcattttctctct--taattcaacatt 214  Q
    ||||||||||||||||||   |||  ||||||||||||||||| ||||||||| ||||||||||||||  || |||||||||||||  |||||||||| |    
T  33508639 aagaccatttacaatggttcaaaagtttcaacaaccctcaacacccatttttttcaattcccaacactctacgtcattttctctctcttaattcaacact 33508540  T
Q  215 cattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||  |||||||||| ||||| ||||    
T  33508539 cattcaatttttacctctccaataattttttcatttaacactctac 33508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 32748794 - 32748901
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||| ||||||||||||||||||||| ||||| |||||||||||  ||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  32748794 tcaacatctattttttcaattcccaacactccacattattttctctctcataatttaacactcattcaatttttacatctccaatgattttttcattcaa 32748893  T
Q  253 caccctac 260  Q
    ||||||||    
T  32748894 caccctac 32748901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 45549694 - 45549587
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||| |||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  45549694 tcaacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaa 45549595  T
Q  253 caccctac 260  Q
    ||||||||    
T  45549594 caccctac 45549587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 20354194 - 20354327
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| | || |||||| | | |||||||||||| |||||| ||||||||||| ||| |  ||||||||||  ||||||||||||    
T  20354194 caatggttacaaattttcaatacccttcaacacctactttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaattttt 20354293  T
Q  227 acctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||    
T  20354294 acctctccaatggttttttcattcaacaccctac 20354327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 22737684 - 22737564
Alignment:
Q  141 atattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatg 238  Q
    |||||||||| |  |||||| ||| ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||    
T  22737684 atattcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaacttttaccttctccaatg 22737585  T
Q  239 gttttttcattcaacaccctac 260  Q
    | ||||||||||||||| ||||    
T  22737584 g-tttttcattcaacactctac 22737564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 26812110 - 26812218
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatgg-ttttttcattca 251  Q
    |||||| ||||||||||||||||||||||| || |||||||| ||| |  |||||||| | |||||||| ||||||||||||||||| ||||||||||||    
T  26812110 tcaacacccattttttcaattcccaacactccatatcattttatctttcataattcaatactcattcaaattttacctctccaatggtttttttcattca 26812209  T
Q  252 acaccctac 260  Q
    ||| |||||    
T  26812210 acatcctac 26812218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 263
Target Start/End: Original strand, 38351550 - 38351686
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| | || | || || || ||||| |||| |||||||| ||||||||||||||| |  |||||||||||||||| |||||||    
T  38351550 caatggttacaaattttcaataccctttaatattcacttttttaatttccaacactccacatcattttctctttcataattcaacattcatttaattttt 38351649  T
Q  227 acctctccaatggttttttcattcaacaccctactcc 263  Q
    |||||||||||  |||||| ||||||| |||||||||    
T  38351650 acctctccaataatttttttattcaacgccctactcc 38351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 28318130 - 28318012
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| | |||||||| ||||| ||||||||||||| |||||||||||||  ||||||||||||||  | || || ||||| |||| |||| ||    
T  28318130 attcaacaacctttaacatccacttttttaattcccaacactccacatcattttctctctcttaattcaacacccttttaa-ttttaactcttcaatagt 28318032  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||||||||    
T  28318031 tttttcattcaacaccctac 28318012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 32130345 - 32130238
Alignment:
Q  156 caacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggtt-ttttcattcaa 252  Q
    ||||| ||| ||||| ||||||||||||| |||||||||||||||||  ||||| || |  ||||||||||||||||||||||||||| |||||||||||    
T  32130345 caacacccacttttttaattcccaacactccacatcattttctctctcataatttaatacccattcaatttttacctctccaatggtttttttcattcaa 32130246  T
Q  253 caccctac 260  Q
    || |||||    
T  32130245 catcctac 32130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 43571170 - 43571062
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  43571170 ctcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattca 43571071  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  43571070 acactctac 43571062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 22191228 - 22191322
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||| |||||||| ||||||||||||||||| | |||||||| |||||||| ||||| ||||||||||||  |||||||||||||| ||||    
T  22191228 tttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg--ttttcattcaacactctac 22191322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 25218881 - 25218777
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    |||||||| |||||||||| ||||||||||| |||||||||||||| | |||||| | ||||| || ||||| |||||||||||| ||||||||||||||    
T  25218881 aacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctccaatgg-tttttcattcaaca 25218783  T
Q  255 ccctac 260  Q
    | ||||    
T  25218782 ctctac 25218777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 21654854 - 21654949
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||| |||||||| ||||||||||||||||| | |||||||| ||||||||  |||| |||||||||||| ||||||||||||||| ||||    
T  21654854 tttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatgg-tttttcattcaacactctac 21654949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 35193183 - 35193093
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacac 255  Q
    ||||||||||||||||||| ||||| ||||||| ||| | |||||||| |||||||| ||||||| |||||||||| |||||||||||||||    
T  35193183 tttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttaccatctccaatgg-tttttcattcaacac 35193093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 25038657 - 25038568
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    ||||| |||||||| |||||||||||||||||||||| | |||| ||| |||||||| ||||| |||||||||||| ||||||||||||||    
T  25038657 ttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctctccaatgg-tttttcattcaaca 25038568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 24793499 - 24793594
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    |||||||| |||||||||| || |||||||||||| | | |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  24793499 tttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttacactctccaatgg-tttttcattcaacactctac 24793594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 30630878 - 30630783
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||||||||| ||||| ||||||||||| | |||||| | |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  30630878 ttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctctccaatgg-tttttcattcaacactctac 30630783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 48984915 - 48985010
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    |||||||||| ||||| || ||||||||||||||||| | |||||||| ||||||||  |||||| |||||||||| ||||||||||||||| ||||    
T  48984915 tttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttaccatctccaatgg-tttttcattcaacactctac 48985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 38970028 - 38970136
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttct----ctcttaattcaacattcattcaatttttacc-tctccaatggttttttcatt 249  Q
    |||||| ||| |||||||||| |||||||| ||||||||||| |    |||||| ||||||| |||||||| ||||||| ||||||||| |||| |||||    
T  38970028 tcaacacccactttttcaatttccaacactccacatcatttttttttcctctta-ttcaacactcattcaacttttaccgtctccaatgatttt-tcatt 38970125  T
Q  250 caacaccctac 260  Q
    |||||||||||    
T  38970126 caacaccctac 38970136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 114487 - 114578
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttt 244  Q
    |||||| ||| ||||| ||||| ||||||| ||||||||||||||||| | |||||||| ||||| || ||||| | |||||||||||||||    
T  114487 tcaacacccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaacttttatcatctccaatggttttt 114578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 43202215 - 43202102
Alignment:
Q  155 tcaacatccattttttcaattcccaa-cacttcacatcattttctctct-taattcaacattc---attcaattttta-cctctccaatggttttttcat 248  Q
    |||||||||| ||||||||| ||||| |||||||||| ||||||||||| | | |||||| ||   |||||| ||||| |||||||||||||||||| ||    
T  43202215 tcaacatccactttttcaatgcccaatcacttcacattattttctctctcttactcaacactcattattcaacttttaccctctccaatggtttttt-at 43202117  T
Q  249 tcaacaccctactcc 263  Q
    ||||||  |||||||    
T  43202116 tcaacattctactcc 43202102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 26013263 - 26013173
Alignment:
Q  165 ttttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaatttttac-ctctccaatggttttttcattcaacac 255  Q
    |||| |||||| |||||||| || ||||||||||||||   ||||| | |||||||| |||||| ||||||||| | |||||||||||||||    
T  26013263 ttttatcaatttccaacactccatatcattttctctctcttttcaatactcattcaacttttactctctccaat-gatttttcattcaacac 26013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 41183240 - 41183379
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattca 220  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  ||| ||    
T  41183240 catttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccataca 41183339  T
Q  221 atttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  41183340 atttttacctctccaatggttttttcattcaacaccctac 41183379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 6048807 - 6048664
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||| || |||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  ||    
T  6048807 agaccatttacaatggtaactaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 6048708  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6048707 ttcaatttttacctctccaatggttttttcattcaacaccctac 6048664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 118 - 263
Target Start/End: Original strand, 29701643 - 29701790
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  |    
T  29701643 aagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 29701742  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctactcc 263  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  29701743 attcaatttttacccctccaatggttttttcattcaacaccctactcc 29701790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 50415941 - 50415798
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| |||||||||| |||||||| |||||||||||||||||  ||||||||||  ||    
T  50415941 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccca 50415842  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  50415841 ttcaatttttacctctccaatggttttttcattcaacaccctac 50415798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 36178817 - 36178672
Alignment:
Q  118 aagaccatttacaatggtcacaaata-ttcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacatt 214  Q
    |||||||| ||||||||| | ||| | ||||||| || |||||| ||| |||||||||||||||||||||| ||||||||||||||  |||||||||||     
T  36178817 aagaccatgtacaatggtaaaaaaaaattcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatc 36178718  T
Q  215 cattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  36178717 cattcaatttttacctctccaatggttttttcattcaacaccctac 36178672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 55026701 - 55026838
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    |||| |||||||||||| | | | |||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||  ||||||||||||| |||    
T  55026701 agactatttacaatggtaaaataaattcaacaaccctcaacacccattttttcaattttcaacacttcacttcattttctctctcttaattcaacactca 55026800  T
Q  217 ttcaatttttacctctccaatggttttttcattcaaca 254  Q
    ||||||||||||||||||||||||||||||||||||||    
T  55026801 ttcaatttttacctctccaatggttttttcattcaaca 55026838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 32120550 - 32120406
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  32120550 aagaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 32120451  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     ||||||||||||||||||||| ||||||||||||||||||||||    
T  32120450 tttcaatttttacctctccaatagttttttcattcaacaccctac 32120406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 27847370 - 27847514
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||| ||||||||  | |||||||||| | ||||||||||||| |||||||||| |||||||| ||||||||||  |||||||||||||||||  |    
T  27847370 aagaccatgtacaatggaaaaaaatattcaatacccctcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccc 27847469  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||    
T  27847470 atttaatttttacctcttcaatggttttttcattcaacaccctac 27847514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 30418541 - 30418398
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | |||||| |||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  30418541 aagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 30418442  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  30418441 attcaatttttacctctccaatggtttttt-attcaacaccctac 30418398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 50733977 - 50734121
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||| | | ||||||||||| |||||||||||| |||||||||| |||| ||| ||||||||||  ||||||||||||||| |       
T  50733977 aagaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacct 50734076  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  50734077 attcaatttttacctctccaatggttttttcattcaacatcctac 50734121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 50778878 - 50778734
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | ||||||||||| |||||||||||| |||||||||| |||| ||| |||||||||||||  |||||||||||| |       
T  50778878 aagaccatttacaatggtaaaatatattcaacaatcctcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacct 50778779  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  50778778 attcaatttttacctctccaatggttttttcattcaacatcctac 50778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 44084271 - 44084410
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  |     
T  44084271 agaccatttacaatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccct 44084370  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacacc 256  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  44084371 ttcaatttttacctctccaatagttttttcattcaacacc 44084410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 127 - 256
Target Start/End: Complemental strand, 52000165 - 52000034
Alignment:
Q  127 tacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattt 224  Q
    ||||||||| |||||| ||||| |||| |||||||  ||||||| ||||||||||||| |||||||||||||||||  |||||||||||| |||||||||    
T  52000165 tacaatggttacaaattttcaataaccttcaacatttatttttttaattcccaacactccacatcattttctctctcataattcaacatttattcaattt 52000066  T
Q  225 ttacctctccaatggttttttcattcaacacc 256  Q
    |||| |||||||||||||||||||||||||||    
T  52000065 ttacatctccaatggttttttcattcaacacc 52000034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 254
Target Start/End: Original strand, 6832345 - 6832483
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttc--tctcttaattcaacattc 215  Q
    ||||||||||||| ||||   | || || |||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||| ||||||||||| ||    
T  6832345 aagaccatttacattggttcaacatttttaacaaccctcaacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactc 6832444  T
Q  216 attcaatttttacctctccaatggttttttcattcaaca 254  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  6832445 attcaatttttatctctccaatggttttttcattcaaca 6832483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 10426520 - 10426399
Alignment:
Q  141 atattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc--ttaattcaacattcattcaatttttacctctccaatg 238  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||  |||||| || |  ||||||||||||||||||||||||    
T  10426520 atattcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctcttttaatttaatacccattcaatttttacctctccaatg 10426421  T
Q  239 gttttttcattcaacaccctac 260  Q
     |||||||||||||||||||||    
T  10426420 attttttcattcaacaccctac 10426399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 51999348 - 51999204
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||  | | ||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  ||    
T  51999348 agaccatttacaatggcaaaatatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 51999249  T
Q  217 ttcaatttttacctctcc-aatggttttttcattcaacaccctac 260  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||    
T  51999248 ttcaatttttatctctccaaatagttttttcattcaacaccctac 51999204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 5845215 - 5845108
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  5845215 tcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaa 5845116  T
Q  253 caccctac 260  Q
    ||||||||    
T  5845115 caccctac 5845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 17466513 - 17466620
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  17466513 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaa 17466612  T
Q  253 caccctac 260  Q
    ||||||||    
T  17466613 caccctac 17466620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 25790850 - 25790743
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  25790850 tcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatggttttttcattcaa 25790751  T
Q  253 caccctac 260  Q
    ||||||||    
T  25790750 caccctac 25790743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 26165629 - 26165522
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26165629 tcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacctctccaatggttttttcattcaa 26165530  T
Q  253 caccctac 260  Q
     |||||||    
T  26165529 aaccctac 26165522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 38572265 - 38572122
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||||||||||||| | | | |||||||||||||||| | | | ||||||||||| ||||||| ||||| |||||||||||  |||||||||||  |    
T  38572265 agaccatttacaatggtaaaacaaattcaacaaccctcaatacctactttttcaattctcaacactccacattattttctctctcttaattcaacatcta 38572166  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  38572165 ttcaatttttacctctccaatggttttttcattcaacactctac 38572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 4045941 - 4046085
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||| ||||||||| |   | ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  |    
T  4045941 aagaccatgtacaatggtaaatcaaattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 4046040  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     || |||||||||||||||||| | ||||||||||||||||||||    
T  4046041 ttttaatttttacctctccaatagctttttcattcaacaccctac 4046085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 20139322 - 20139466
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||| ||||||||| | ||  |||||||||| ||||| | ||| ||||||||||| ||||||||||||||||||  ||||||||||||||||| |||    
T  20139322 agaccatctacaatggttaaaaccattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactca 20139421  T
Q  217 ttcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||||    
T  20139422 ttcaacttttaccttctccaatggttttttcattcaacactctac 20139466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 47144171 - 47144278
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  ||||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  47144171 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaatttttacctctccaatagttttttcattcaa 47144270  T
Q  253 caccctac 260  Q
    ||||||||    
T  47144271 caccctac 47144278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 11907991 - 11908124
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| | || |||||| ||| |||||||||| |||||||| ||||||||||| |||||  ||||||||||  ||||||||||||    
T  11907991 caatggttacaaattttcaatacccttcaacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaattttt 11908090  T
Q  227 acctctccaatggttttttcattcaacaccctac 260  Q
    |||||| |||||||||||||||||||||||||||    
T  11908091 acctcttcaatggttttttcattcaacaccctac 11908124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 232
Target Start/End: Original strand, 43473851 - 43473967
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||| | | |||||||||||||||||||||||| ||||||||||||||||| | || |||||||  |||||||||||||||||  |    
T  43473851 aagaccatttacaatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacaccc 43473950  T
Q  216 attcaatttttacctct 232  Q
    |||||||||||||||||    
T  43473951 attcaatttttacctct 43473967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 48887093 - 48886954
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||| |||||||||   |||| |||||||||| |||||||||| ||||||||||||||||||     || |||||||||||  ||||| ||||| |    
T  48887093 aagaccatatacaatggttgaaaattttcaacaaccttcaacatccactttttcaattcccaacac-----attattttctctctcttaatttaacatcc 48886999  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  48886998 attcaatttttacctctccaatggttttttcattcaacactctac 48886954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 42560887 - 42561006
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| |||||| ||| ||||||||||||||||| | ||||||||||||||  |||||||||||||  | ||||||||||| ||||||||| ||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacaccctttcaatttttaactctccaatagt 42560986  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||||||||    
T  42560987 tttttcattcaacaccctac 42561006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 260
Target Start/End: Original strand, 138939 - 139081
Alignment:
Q  121 accatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcatt 218  Q
    ||||| ||||||||| | ||  |||||||||| ||||||||||  ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||    
T  138939 accatgtacaatggttaaaaccattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcatt 139038  T
Q  219 caattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||| ||||| ||||||||||| |||||| ||||||||| ||||    
T  139039 caacttttaccctctccaatgattttttaattcaacactctac 139081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 12974640 - 12974774
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattca-atttt 225  Q
    ||||||| | |||| ||||| | || |||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  ||||||  ||||    
T  12974640 caatggttaaaaattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcatttttt 12974739  T
Q  226 tacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||| ||||    
T  12974740 tacctctccaatggttttttcattcaacactctac 12974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 46573037 - 46572894
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattca 216  Q
    |||||||| ||||||||| | ||| ||||||||||  |||||| ||| ||||||||||||||||||| ||||||||||||||||| | |||||| | |||    
T  46573037 aagaccatctacaatggtgaaaaacattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactca 46572938  T
Q  217 ttcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||| |||||||||| | ||||||||||||||| ||||    
T  46572937 ttcaacttttaccctctccaatag-tttttcattcaacactctac 46572894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 25450709 - 25450603
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| | ||||||||||||    
T  25450709 tcaacacccattttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttatcctctccaatag-tttttcattcaa 25450611  T
Q  253 caccctac 260  Q
    ||| ||||    
T  25450610 cactctac 25450603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 42601759 - 42601865
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  42601759 tcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccttctccaatgg-tttttcattcaa 42601857  T
Q  253 caccctac 260  Q
    ||| ||||    
T  42601858 cactctac 42601865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 256
Target Start/End: Original strand, 46123897 - 46124027
Alignment:
Q  128 acaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttt 225  Q
    |||||||| | ||| |||||| | || |||||| | | |||||||||| |||||| |  ||||||||||||||||  |||||||||| ||||||||||||    
T  46123897 acaatggtaaaaaaaattcaatacccgtcaacacctactttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaatttt 46123996  T
Q  226 tacctctccaatggttttttcattcaacacc 256  Q
    |||||||||| || |||||||||||||||||    
T  46123997 tacctctccattgattttttcattcaacacc 46124027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 51304338 - 51304443
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaaca 254  Q
    |||||| ||||||||||||  ||||||| ||| ||||||||||| |  ||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  51304338 aacatctattttttcaattttcaacactccacgtcattttctctatcataattcaacacccattcaatttttacctctccaatagttttttcattcaaca 51304437  T
Q  255 ccctac 260  Q
    | ||||    
T  51304438 ctctac 51304443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 225
Target Start/End: Complemental strand, 37183948 - 37183840
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    ||||||||||||||||  | | ||||||||||||||||||||  || |||||||||||| |||||| |||||||||||||  ||||||||||||||  ||    
T  37183948 agaccatttacaatggcaaaatatattcaacaaccctcaacactcactttttcaattcctaacactccacatcattttctctctcttaattcaacaccca 37183849  T
Q  217 ttcaatttt 225  Q
    |||||||||    
T  37183848 ttcaatttt 37183840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 25832788 - 25832693
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||| || ||||||||| ||||||||||||||| ||||    
T  25832788 tttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaacttttaccccctccaatgg-tttttcattcaacactctac 25832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 35853268 - 35853160
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  35853268 ctcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattca 35853169  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  35853168 acactctac 35853160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 37410483 - 37410388
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||| ||| ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  37410483 tttttcaattcccaatactccacatcattttctctctcttattcaacattcattcaacttttaccctctccaatgg-tttttcattcaacactctac 37410388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 41890543 - 41890638
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  41890543 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 41890638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 42601569 - 42601474
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  42601569 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 42601474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 49710465 - 49710357
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||  ||||||||||||||||||||||    
T  49710465 ctcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattca 49710366  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  49710365 acactctac 49710357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 49823234 - 49823139
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  49823234 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatgg-tttttcattcaacactctac 49823139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 15493884 - 15493791
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaatttttacc-tctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| |||||||| | ||||||||||||||| ||||    
T  15493884 tttttcaattcccaacactccacatcactttctctctt-attcaacattcattcaacttttaccatctccaat-gatttttcattcaacactctac 15493791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 51427109 - 51427199
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacac 255  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||| |||||||||| |||||||||||||||    
T  51427109 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatgg-tttttcattcaacac 51427199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 35424084 - 35423983
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||| |||||| | ||||| |||||| ||||| ||||||||||||    
T  35424084 tcaacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctcaaatgg-tttttcattcaa 35423986  T
Q  253 cac 255  Q
    |||    
T  35423985 cac 35423983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 7008017 - 7008112
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaaca 212  Q
    ||||||||||||||||| | | | |||||||||||||||||| ||| |||||||||| ||||||||  |||||||||  |||||||||||||||||    
T  7008017 agaccatttacaatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactctacatcattttctctctcttaattcaaca 7008112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 28410391 - 28410499
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaatttttacc-tctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||| |||||||||||| || |||||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  28410391 ctcaacacccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttaccatctccaatgattttttcattca 28410490  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  28410491 acactctac 28410499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 43022645 - 43022753
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||  ||| ||||||||||||||||||    
T  43022645 ctcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattca 43022744  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  43022745 acactctac 43022753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 33748683 - 33748784
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||||| | |||||||||||| |||||||| |||||||||||||||| || | |||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  33748683 tcaacacctattttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttaccttctccaatgg-tttttcattcaa 33748781  T
Q  253 cac 255  Q
    |||    
T  33748782 cac 33748784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 33935000 - 33935094
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| ||| |||| ||||| ||||||||||||  |||||||||||||| ||||    
T  33935000 tttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctccaatgg--ttttcattcaacactctac 33935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 28155340 - 28155194
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||||  ||||||| | |||  ||||| | || |||||| ||| |||||||||| | ||||||  |||| |||||||||||  |||||||||| ||    
T  28155340 aagaccattctcaatggtaaaaaaatttcaatacccttcaacacccactttttcaatttctaacactctacataattttctctctcataattcaacactc 28155241  T
Q  216 attcaattttta--cctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||   |||||||||||||||||||| ||||||| ||||    
T  28155240 attcaatttttttgcctctccaatggttttttcagtcaacactctac 28155194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 49147363 - 49147287
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacct 230  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||||    
T  49147363 tcaacatctactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacct 49147287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 47701174 - 47701031
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatca---ttttctctcttaattcaacattc 215  Q
    ||||||| ||||||||| | ||  | |||||||| ||||||| ||| ||||||||||| ||||||| |||||||   ||||||||||| |||||||| ||    
T  47701174 agaccatatacaatggttaaaaccaatcaacaacactcaacacccactttttcaattctcaacactccacatcatttttttctctctt-attcaacactc 47701076  T
Q  216 attcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    ||| || |||||| |||||| ||||||||||| |||||||| ||||    
T  47701075 attaaacttttactctctcc-atggttttttctttcaacactctac 47701031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 49407412 - 49407306
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||||||||| |||||||||| | |||||||||| | |||||||||| || |||||| | |||||||| ||||||| ||| |||||| ||||||||||||    
T  49407412 tcaacatccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttaccttcttcaatgg-tttttcattcaa 49407314  T
Q  253 caccctac 260  Q
    ||||||||    
T  49407313 caccctac 49407306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 35472701 - 35472631
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatt 223  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||||  ||||||||||| |||| ||||    
T  35472701 tcaacatccactttttcaattcccaacactccacattattttctctctcataattcaacatccatttaatt 35472631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 37183074 - 37183031
Alignment:
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  37183074 ttcaatttttacctctccaatggttttttcatttaacaccctac 37183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 49357561 - 49357481
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttt 244  Q
    ||||| |||||| |||| |||| |||||||||||||| | |||||||| |||||||| ||||| |||||||||||||||||    
T  49357561 ttttttaattcctaacatttcatatcattttctctctcttattcaacactcattcaacttttaccctctccaatggttttt 49357481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 50017051 - 50017126
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc 229  Q
    |||| ||||| |||||||||||||||||||  |||||||||||||| | | |||||||| |||||||| |||||||    
T  50017051 tcaaaatccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttacc 50017126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 7521201 - 7521145
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaa 221  Q
    |||||||||| ||||||||||| |||||||||||||| | |||||||| ||||||||    
T  7521201 tttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaa 7521145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 42258376 - 42258432
Alignment:
Q  205 attcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||| ||||| ||||| |||| ||||||||||||||||| ||||    
T  42258376 attcaacattcattcaacttttaccctcttcaatagttttttcattcaacactctac 42258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 203
Target Start/End: Original strand, 53722093 - 53722153
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctctt 203  Q
    |||||||||| |||||||   |||||||||||| |||||||| ||||||||||||| ||||    
T  53722093 attcaacaacactcaacagttattttttcaatttccaacactccacatcattttctttctt 53722153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 744222 - 744261
Alignment:
Q  163 cattttttcaattcccaacacttcacatcattttctctct 202  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  744222 cattttttcaattaccaacactccacatcattttctctct 744261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 202
Target Start/End: Complemental strand, 50176152 - 50176113
Alignment:
Q  163 cattttttcaattcccaacacttcacatcattttctctct 202  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  50176152 cattttttcaattcccaacactccacatcattttatctct 50176113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 30862838 - 30862763
Alignment:
Q  189 atcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaacaccctactcc 263  Q
    |||||||||||||| | |||||||| ||||| ||| |||||| ||||||||| ||||| |||||||||| |||||||    
T  30862838 atcattttctctctcttattcaacactcatttaatatttaccctctccaatgattttt-cattcaacactctactcc 30862763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 57855 - 57711
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    ||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  57855 aagaccatttataatggtcacaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 57756  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  57755 attcaatttttacctcttcaatggttttttcattcaacaccctac 57711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 55068 - 55141
Alignment:
Q  159 catccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacctc 231  Q
    |||||||||||||||||| ||||||| | ||||||||| | | | ||||||||||  |||| ||||||||||||    
T  55068 catccattttttcaattctcaacactccgcatcattttttttttgtaattcaacacccatttaatttttacctc 55141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 30648225 - 30648081
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattc 215  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||||| |||| ||||||  |||||||||||||||| ||    
T  30648225 aagaccatttacaatggtcacaaacattcaacaaccctcaacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactc 30648126  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  30648125 attcaatttttacctctccaatggttttttcattcaacactctac 30648081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 42807112 - 42806968
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||  ||||||||||||||  |    
T  42807112 aagaccatttacaatggtcacaaatattcaacaaccctcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacaccc 42807013  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  42807012 attcaatttttacatctctaatggttttttcattcaacaccctac 42806968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 19241275 - 19241419
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||| ||||||| ||||||||||||||  |||||||||||||  |    
T  19241275 aagaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacaccc 19241374  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19241375 attcaatttttacctctccaatggttttttcattcaacaccctac 19241419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 27942451 - 27942594
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||  |||||||||||||  ||    
T  27942451 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacaccca 27942550  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27942551 ttcaatttttacctctccaatggttttttcattcaacaccctac 27942594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 119 - 259
Target Start/End: Complemental strand, 25671017 - 25670875
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||| ||||||||| |||||| ||||| |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||  |||||||||| |||    
T  25671017 agaccatgtacaatggttacaaattttcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactca 25670918  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacacccta 259  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  25670917 ttcaatttttaactctccaatggtgttttcattcaacacccta 25670875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 23089477 - 23089621
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||| | ||||||| |||||| ||||| | || |||||| ||| ||||| |||||||||||||||||||||||||||||||  ||||||||||  |    
T  23089477 aagaccatgtgcaatggttacaaattttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacaccc 23089576  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23089577 attcaatttttacctctccaatggttttttcattcaacaccctac 23089621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 14278788 - 14278931
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattca 216  Q
    |||||||||||||||||| | ||| |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  14278788 aagaccatttacaatggtgaaaaacattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattca 14278887  T
Q  217 ttcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  14278888 ttcaacttttaccctctccaatgg-tttttcattcaacactctac 14278931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 40888854 - 40888997
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    ||||||||||||||||| | | | |||||| |||| |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  ||    
T  40888854 agaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 40888953  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  40888954 ttcaatttttacctctccaatagttttttcattcaacaccctac 40888997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 32976688 - 32976545
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | |||||| |||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  32976688 aagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 32976589  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  32976588 attcaatttttacctctccaatggtttttt-attcaacaccctac 32976545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 7650963 - 7651106
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| | |||| | ||||||||||||||||||||| ||||||||||||||  |||||||||||||  ||    
T  7650963 agaccatttacaatggtaaaatacattcaacaacctttaacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 7651062  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    || |||||||||| ||||||||||||||||||||||||||||||    
T  7651063 tttaatttttacccctccaatggttttttcattcaacaccctac 7651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 31013919 - 31013812
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31013919 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattcaa 31013820  T
Q  253 caccctac 260  Q
    ||||||||    
T  31013819 caccctac 31013812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 4219552 - 4219413
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctcttaattcaacattcatt 218  Q
    ||||||| | ||||||| |||||| ||||| | || |||||| ||| ||||||||||||||||||||||||||||||||||   ||||||||||  ||||    
T  4219552 agaccatgtgcaatggttacaaattttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctca--taattcaacacccatt 4219455  T
Q  219 caatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  4219454 caatttttacctctccaatggttttttcattcaacactctac 4219413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 27407154 - 27407010
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattc-aacattc 215  Q
    ||||||||||||||||||||||| ||||||||||| | ||||  || ||||||||||||||||||| ||||| |||||||  |||||||||| |||| ||    
T  27407154 agaccatttacaatggtcacaaacattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctcttaattctaacactc 27407055  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||    
T  27407054 attcaacttttacctctccaatgattttttcattcaacactctac 27407010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 39008450 - 39008583
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaattttt 226  Q
    ||||||| |||||| ||||| | || |||||||||| ||||||||||||||||||| || ||| ||||||||||  ||||||||||| ||||||||||||    
T  39008450 caatggttacaaattttcaatacccttcaacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaattttt 39008549  T
Q  227 acctctccaatggttttttcattcaacaccctac 260  Q
    || |||||||||||||||||||||||| ||||||    
T  39008550 acatctccaatggttttttcattcaacgccctac 39008583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 23649279 - 23649136
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctct--cttaattcaacattca 216  Q
    ||||||||||| |||||   |||  ||||||||||||||||   || ||||||||||||||||||| || ||||||||||||  |||||||||||||| |    
T  23649279 agaccatttacgatggttgaaaagtttcaacaaccctcaactctcactttttcaattcccaacactccatatcattttctctttcttaattcaacattta 23649180  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    || ||||||||||||| |||||||||||||||||||||||||||    
T  23649179 tttaatttttacctcttcaatggttttttcattcaacaccctac 23649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 23809292 - 23809435
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctct--cttaattcaacattca 216  Q
    ||||||||||| |||||   |||  ||||||||||||||||   || ||||||||||||||||||| || ||||||||||||  |||||||||||||| |    
T  23809292 agaccatttacgatggttgaaaagtttcaacaaccctcaactctcactttttcaattcccaacactccatatcattttctctttcttaattcaacattta 23809391  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    || ||||||||||||| |||||||||||||||||||||||||||    
T  23809392 tttaatttttacctcttcaatggttttttcattcaacaccctac 23809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29619089 - 29618982
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  29619089 tcaacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacctctccaatggttttttcattcaa 29618990  T
Q  253 caccctac 260  Q
    ||||||||    
T  29618989 caccctac 29618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 31008497 - 31008353
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctc-aacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||||||||||||||| | | | ||||||||||| |  |||| ||| ||||||||||| |||||||||||||||||||||||||  ||||| ||||  |    
T  31008497 agaccatttacaatggtaaaatacattcaacaaccttataacacccactttttcaattctcaacacttcacatcattttctctctcttaatttaacaccc 31008398  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  31008397 attcaatttttacctttccaatggttttttcattcaacatcctac 31008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 42317847 - 42317990
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | ||||||||||| ||||||| || |||||||||| |||||||| || |||||||  |||||||||||||||||  |    
T  42317847 aagaccatttacaatggtaaaacaaattcaacaaccttcaacattcactttttcaatttccaacactccatatcattttctctctcttaattcaacaccc 42317946  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
     ||||||||||||||||||||| | ||||||||||||||||||||    
T  42317947 tttcaatttttacctctccaatag-tttttcattcaacaccctac 42317990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 3454732 - 3454838
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||||  |||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  3454732 tcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaattttta-ctctccaatgattttttcattcaa 3454830  T
Q  253 caccctac 260  Q
    ||||||||    
T  3454831 caccctac 3454838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 13479899 - 13479792
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||| ||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  13479899 tcaacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacatctccaatagttttttcattcaa 13479800  T
Q  253 caccctac 260  Q
    ||||||||    
T  13479799 caccctac 13479792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 36572507 - 36572388
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||||||||||| || |||||||||| |||| ||| |||||||||||||||||  ||||||||||  |||||||||||||  |||||||||||    
T  36572507 attcaacaaccctcaacattcactttttcaatttccaatactccacatcattttctctctcttaattcaacacccattcaatttttatttctccaatggt 36572408  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||| ||||| ||||    
T  36572407 tttttcatttaacactctac 36572388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 39238421 - 39238513
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacacc 256  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||| |||||||||  |||||||||||||||||    
T  39238421 tttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaatttttatctctccaataattttttcattcaacacc 39238513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 260
Target Start/End: Original strand, 25652812 - 25652915
Alignment:
Q  158 acatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||| |||||||||||| |||||||||||||||    
T  25652812 acatccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctccaatgg-tttttcattcaacac 25652910  T
Q  256 cctac 260  Q
     ||||    
T  25652911 tctac 25652915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 37882541 - 37882405
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctcttaattcaacattcat 217  Q
    |||||||| ||||||||| | ||| ||||||||||  |||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||||  ||||    
T  37882541 aagaccatctacaatggtgaaaaacattcaacaacgttcaacacccattttttcaattcccaacactccacatcattttttctctt-attcaacgctcat 37882443  T
Q  218 tcaatttttacc-tctccaatggttttttcattcaacac 255  Q
    |||| ||||||| | |||||| | |||||||||||||||    
T  37882442 tcaacttttaccatttccaatag-tttttcattcaacac 37882405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 41263358 - 41263459
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||| ||||||||||||    
T  41263358 tcaacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacattcattcaacttttaccctctccaatgg-tttttcattcaa 41263456  T
Q  253 cac 255  Q
    |||    
T  41263457 cac 41263459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 8176378 - 8176272
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  8176378 tcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaa 8176280  T
Q  253 caccctac 260  Q
    ||| ||||    
T  8176279 cactctac 8176272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 4577012 - 4577107
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  4577012 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 4577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 41153081 - 41152975
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| | |||||||| |||||||| ||||||| ||| |||| | ||||||||||||    
T  41153081 tcaacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttaccttcttcaat-gatttttcattcaa 41152983  T
Q  253 caccctac 260  Q
    ||| ||||    
T  41152982 cactctac 41152975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 260
Target Start/End: Complemental strand, 32363725 - 32363583
Alignment:
Q  120 gaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctctt--aattcaacattcat 217  Q
    ||||||||||||||||   |||| || || |||| |||||| ||| ||||| ||||  ||||||| ||||| ||||||||||||  |||||||||  |||    
T  32363725 gaccatttacaatggttgaaaatttttaataaccttcaacacccacttttttaattttcaacactccacattattttctctcttttaattcaacacccat 32363626  T
Q  218 tcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    | |||||||||||||| ||| |||||||| |||||||| ||||    
T  32363625 ttaatttttacctctctaatagttttttcgttcaacactctac 32363583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 4938144 - 4938289
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||| ||| ||||| | ||  |||||||||   ||||||  |||||||||||||| ||| |||  |||||||||  ||||||||||||||||| |     
T  4938144 aagaccatctacgatggttaaaatcattcaacaatattcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacacta 4938243  T
Q  216 attcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    |||||| ||||| ||||||||||| |||||||||||||||| ||||    
T  4938244 attcaacttttaccctctccaatgattttttcattcaacactctac 4938289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 254
Target Start/End: Complemental strand, 34529473 - 34529357
Alignment:
Q  139 aaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaa 236  Q
    ||||||||||||||  |||||| | | ||||| ||||| |||||| ||||||||||||||||| || ||| |||||||||| || ||||| |||||||||    
T  34529473 aaatattcaacaacattcaacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaacttttatcctctccaa 34529374  T
Q  237 tggttttttcattcaaca 254  Q
    ||| ||||||||||||||    
T  34529373 tgg-tttttcattcaaca 34529357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 10569874 - 10569779
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||| | ||| | |||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  10569874 tttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctctccaatgg-tttttcattcaacactctac 10569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 260
Target Start/End: Complemental strand, 27407819 - 27407713
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttctctct---taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||| |||||||||| |||| ||| ||||||||||| |||||   | |||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  27407819 aacatccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaa 27407721  T
Q  253 caccctac 260  Q
    ||| ||||    
T  27407720 cactctac 27407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 42608155 - 42608019
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcat 217  Q
    ||||||| ||||||||| | ||| ||||||||||  ||||||||| |||||||||||   |||||| ||| |||||||||||| || |||||||| | ||    
T  42608155 agaccatctacaatggtgaaaaacattcaacaacattcaacatccgttttttcaattattaacactccacgtcattttctctcttttattcaacacttat 42608056  T
Q  218 tcaattttta-cctctccaatggttttttcattcaaca 254  Q
    |||| ||||| ||| |||||| | ||||||||||||||    
T  42608055 tcaacttttaccctttccaatag-tttttcattcaaca 42608019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 8681352 - 8681272
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttt 244  Q
    |||||||||| |||||||| || |||||||||||| | | ||||||||||||||||| ||||| |||||||||||||||||    
T  8681352 tttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctccaatggttttt 8681272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 34709913 - 34709980
Alignment:
Q  193 ttttctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||  |||| ||||||||||| | ||||| |||||||||||||||| ||||    
T  34709913 ttttctctcttaattcaacacccatttaatttttacctattcaatgattttttcattcaacactctac 34709980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 34918540 - 34918453
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    |||||||||| |||||||| ||||||||||||| |||| |||||||| |||||||| ||||| ||||||| || | ||||||||||||||    
T  34918540 tttttcaatttccaacactccacatcattttctttctt-attcaacactcattcaacttttaccctctcc-attgatttttcattcaaca 34918453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 11954796 - 11954879
Alignment:
Q  178 caacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||| ||||| ||||  |||||| ||||||||||||||| ||||    
T  11954796 caacactccacatcattttctctctcttattcaacattcattcaacttttatcctcgtcaatgg-tttttcattcaacactctac 11954879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 9274524 - 9274458
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatca-ttttctctcttaattcaacattcattcaa 221  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||| |||| ||||||||    
T  9274524 tcaacatccactttttcaattcccaacactccacatcatttttctctctt-atttaacactcattcaa 9274458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Original strand, 25032361 - 25032424
Alignment:
Q  167 ttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc 229  Q
    ||||||||| |||||||| ||||||||||||||||| | |||||||| |||||||| |||||||    
T  25032361 ttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacttttacc 25032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 260
Target Start/End: Original strand, 15972565 - 15972669
Alignment:
Q  157 aacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaaca 254  Q
    |||||||| |||||||||| |||||| |  |||| ||||||||||| | ||||||||||||||||| ||||||| ||| ||||  |||| ||||||||||    
T  15972565 aacatccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctcttcaataatttt-tcattcaaca 15972663  T
Q  255 ccctac 260  Q
    | ||||    
T  15972664 ctctac 15972669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 12912877 - 12912967
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    ||||| |||||| |||||| ||||||||||| ||||| | ||| |||| |||||||| ||||| |||||| |||| ||||||| |||||||    
T  12912877 ttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctctaatgattttttctttcaaca 12912967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 45101137 - 45100993
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||||||||||||  | | |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  |    
T  45101137 aagaccatttacaatggcaaaatatattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 45101038  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45101037 attcaatttttacctctccaatggttttttcattcaacaccctac 45100993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 15053592 - 15053735
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||||| | ||||||||  |||||||||||||||||  ||    
T  15053592 agaccatttacaatggtcacaaatattcaacaatcatcaacacccactttttcaattcccaacactccgcatcattttctctctcttaattcaacaccca 15053691  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  15053692 ttcaatttttaccactccaatggttttttcattcaacaccctac 15053735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 43525200 - 43525057
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctctt--aattcaacattca 216  Q
    ||||||||||| ||||| | | | |||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||  ||||||||| |||    
T  43525200 agaccatttacgatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactca 43525101  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  43525100 ttcaatttttacctctccaatggttttttcattcaacaccctac 43525057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 43524502 - 43524359
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||| ||||||||| | |||  ||||| | || |||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||| |||    
T  43524502 agaccatgtacaatggttaaaaaatttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactca 43524403  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  43524402 ttcaatttttacctctccaatgattttttcattcaacaccctac 43524359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 118 - 254
Target Start/End: Complemental strand, 12272594 - 12272456
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    ||||| |||||||||||| | | | |||||||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||  |||||||||| ||    
T  12272594 aagactatttacaatggtaaaataaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactc 12272495  T
Q  216 attcaatttttacctctccaatggttttttcattcaaca 254  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12272494 attcaatttttacctctccaatggttttttcattcaaca 12272456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 1958292 - 1958149
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | |||||| |||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||||||||||||||  |    
T  1958292 aagaccatttacaatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 1958193  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  1958192 attcaatttttacctctccaatggtttttt-attcaacaccctac 1958149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 35931822 - 35931964
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | ||||||||||| |||||||||| |||||||||| |||||||| ||||||||||  |||||||||||||||||  |     
T  35931822 agaccatttacaatggtaaaacaaattcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccct 35931921  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  35931922 ttcaatttttacctctccaatag-tttttcattcaacaccctac 35931964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 40283471 - 40283578
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  40283471 tcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaa 40283570  T
Q  253 caccctac 260  Q
    ||||||||    
T  40283571 caccctac 40283578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 43618424 - 43618317
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||| ||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43618424 tcaacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaatggttttttcattcaa 43618325  T
Q  253 caccctac 260  Q
    ||||||||    
T  43618324 caccctac 43618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 42859932 - 42860028
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  42859932 tttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaacaccctac 42860028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 35099431 - 35099538
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| |||||||||||||||||||  |||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35099431 tcaacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgattttttcattcaa 35099530  T
Q  253 caccctac 260  Q
    ||||||||    
T  35099531 caccctac 35099538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 155 - 259
Target Start/End: Original strand, 26244493 - 26244599
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  26244493 tcaacattcactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaatttttacctctccaatagttttttcattcaa 26244592  T
Q  253 cacccta 259  Q
    |||||||    
T  26244593 cacccta 26244599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 260
Target Start/End: Original strand, 23549718 - 23549816
Alignment:
Q  164 attttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||| ||||  |||||||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23549718 attttttcaattcccaacactccacactattttctctctcataattcaacacccattcaatttttacctctccaatggttttttcattcaacaccctac 23549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 13947373 - 13947469
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13947373 tttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacctctccaatggttttttcattcaacacactac 13947469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 29731691 - 29731797
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcatttt-ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaac 253  Q
    |||||| ||| ||||||||||||||||||| ||| ||||||| ||||| ||||||||||  ||||||||||||| ||||||||| |||||||||||||||    
T  29731691 tcaacacccactttttcaattcccaacactccacgtcatttttctctcataattcaacacccattcaatttttaactctccaatagttttttcattcaac 29731790  T
Q  254 accctac 260  Q
    |||||||    
T  29731791 accctac 29731797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 44503174 - 44503270
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||| ||||||||||  |||||||| ||||  ||||||||||||| |||| |||||||||||||||||||||||||||    
T  44503174 tttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaatttttatctcttcaatggttttttcattcaacaccctac 44503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 1634904 - 1634809
Alignment:
Q  167 ttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||| ||||||| |||||||||||||||||  ||||||||||  |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  1634904 ttttcaattctcaacactccacatcattttctctctcataattcaacacccattcagtttttacctctctaatggttctttcattcaacaccctac 1634809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 41477179 - 41477290
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||||| | |||||||| |||||||| ||||||| |||||||||| ||||||||||||    
T  41477179 tcaacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttaccatctccaatgg-tttttcattcaa 41477277  T
Q  253 caccctactcctc 265  Q
    ||| |||| ||||    
T  41477278 cactctacccctc 41477290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 36912399 - 36912519
Alignment:
Q  141 atattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatg 238  Q
    |||||||||| |  |||||| ||| |||||||||||||||||||  |||||||||||||||| | |||||||| |||||||| ||||| |||||||||||    
T  36912399 atattcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactcattcaacttttaccctctccaatg 36912498  T
Q  239 gttttttcattcaacaccctac 260  Q
    | ||||||||||||||| ||||    
T  36912499 g-tttttcattcaacactctac 36912519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 44149877 - 44149973
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||| |||| |||||| | ||||||||||||||| |  |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  44149877 ttttttaatttccaacattccacatcattttctctttcataattcaatacccattcaatttttacctctccaatggttttttcattcaacaccctac 44149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 18029563 - 18029468
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  18029563 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 18029468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 260
Target Start/End: Complemental strand, 29637262 - 29637124
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaa 221  Q
    ||||||||||||| | ||| |||||||||| || ||||||||||||||||||| |||||||| ||||| ||||||||| | | ||| |||| ||||||||    
T  29637262 catttacaatggtgaaaaacattcaacaacacttaacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaa 29637163  T
Q  222 ttttta-cctctccaatggttttttcattcaacaccctac 260  Q
     ||||| ||||| |||| | ||||||||||||||| ||||    
T  29637162 cttttaccctcttcaatag-tttttcattcaacactctac 29637124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 30470893 - 30470787
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||| | |||||||| |||||||| |||||| |||| |||||| ||||||||||||    
T  30470893 tcaagatccattttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttactctcttcaatgg-tttttcattcaa 30470795  T
Q  253 caccctac 260  Q
    ||| ||||    
T  30470794 cactctac 30470787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 8610056 - 8609955
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    ||||||| || ||||||||||||||||||| || ||||||||||||| || |||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  8610056 tcaacattcactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaa 8609958  T
Q  253 cac 255  Q
    |||    
T  8609957 cac 8609955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 34955730 - 34955641
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||    
T  34955730 tttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaaca 34955641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 31129586 - 31129470
Alignment:
Q  147 aacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaatttttacc-tctccaatggtttt 243  Q
    |||||| ||||||| | | ||||||||||| ||||||| |||||||||||||  |||||||||| ||| |||||||| ||||||| |||| |||| ||||    
T  31129586 aacaacactcaacaccaactttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttaccatctctaatgatttt 31129487  T
Q  244 ttcattcaacaccctac 260  Q
    |||||||||||| ||||    
T  31129486 ttcattcaacactctac 31129470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 17741708 - 17741814
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||||||| | |||||| | |||||||| ||||| |||||||||| | ||||||||||||    
T  17741708 tcaacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaat-gatttttcattcaa 17741806  T
Q  253 caccctac 260  Q
    ||| ||||    
T  17741807 cactctac 17741814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 26632228 - 26632122
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||  ||| ||||||||||||| | |||||||| |||||||| |||||| ||||||||||| ||||||||||||    
T  26632228 tcaacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactcattcaacttttactctctccaatgg-tttttcattcaa 26632130  T
Q  253 caccctac 260  Q
    ||| ||||    
T  26632129 cactctac 26632122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 5212298 - 5212393
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||| | ||||||||||||||| ||||    
T  5212298 ttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaat-gatttttcattcaacactctac 5212393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 260
Target Start/End: Original strand, 5735294 - 5735389
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||  ||| |||  |||||||||||||||| | |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  5735294 tttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctccaatgg-tttttcattcaacaccctac 5735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 38207131 - 38206982
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttc----tctctt----aattcaa 210  Q
    ||||||| ||||||||| | ||  |||||| | || ||||||| || ||||||||||||||||||| ||||| ||||||    ||| ||    |||||||    
T  38207131 agaccatgtacaatggtaaaaataattcaatatccttcaacattcactttttcaattcccaacactccacattattttcattttcttttttataattcaa 38207032  T
Q  211 cattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||  ||| |||||||||||||| ||||| |||||||||||||||||||||    
T  38207031 cacacatccaatttttacctcttcaatgattttttcattcaacaccctac 38206982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 42860721 - 42860811
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaa-tttttacctctccaatggttttttcattcaacac 255  Q
    ||||||||||||||||||| ||||||||||||||| | | |||||||| ||||||||  ||| ||||||||||||| |||||||||||||||    
T  42860721 tttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacatttaacctctccaatgg-tttttcattcaacac 42860811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 254
Target Start/End: Complemental strand, 26749483 - 26749383
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||||||||| ||||| ||||||| || ||||||||||| | || ||||||||||||||||| ||||| ||||| |||||| ||||||||||||    
T  26749483 tcaacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctcttcaatgg-tttttcattcaa 26749385  T
Q  253 ca 254  Q
    ||    
T  26749384 ca 26749383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 4625558 - 4625468
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    ||||||||||||||||||| || || ||||||||||| | |||||||| |||||||| ||||| | |||||||||| |||||||||||||||    
T  4625558 tttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaacttttatcatctccaatgg-tttttcattcaacac 4625468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 7511967 - 7511885
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct 202  Q
    ||||||||||  ||||| | ||| |||||||||||||||| ||| ||||||| |||| |||||||| |||||||||||||||||    
T  7511967 agaccatttagtatggttaaaaacattcaacaaccctcaagatc-atttttttaatttccaacactccacatcattttctctct 7511885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 23353294 - 23353191
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcat 217  Q
    ||||||||||||||||| | ||  | |||||||| |||||| |||| |||||||||| |||||||| ||||||  ||||||||| | ||| |||||||||    
T  23353294 agaccatttacaatggtgaaaagcaatcaacaacactcaacgtccactttttcaatttccaacactccacatccctttctctctcttatttaacattcat 23353195  T
Q  218 tcaa 221  Q
    ||||    
T  23353194 tcaa 23353191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 255
Target Start/End: Complemental strand, 38584958 - 38584868
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    ||||||||||||||||||| ||| ||||||||||||| | |||||||| || ||||| ||||| || ||||||||| |||||||||||||||    
T  38584958 tttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttacccactccaatgg-tttttcattcaacac 38584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 13814954 - 13815043
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaaca 254  Q
    |||||||||| |||||||| ||||||||||||||||| | |||||||| | ||||||  |||| |||||||||||| ||||||||||||||    
T  13814954 tttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctccaatgg-tttttcattcaaca 13815043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 42859863 - 42859928
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacact 184  Q
    ||||||||||||||||  | | ||||||||||||||||||||  || |||||||||||||||||||    
T  42859863 agaccatttacaatggcaaaatatattcaacaaccctcaacactcactttttcaattcccaacact 42859928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 30289795 - 30289699
Alignment:
Q  165 ttttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| |||||||  |||||||||||||||| | |||||| |  ||||||| ||||| |||||||||| | ||||||||||||||| ||||    
T  30289795 ttttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctccaattg-tttttcattcaacactctac 30289699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 30532514 - 30532419
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||| |||||| |  ||||||||||||||  | ||||||||||||||||| |||   ||| ||||| | ||||||||||||||||||||    
T  30532514 tttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaactttatactcaccaat-gatttttcattcaacaccctac 30532419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 39811123 - 39811032
Alignment:
Q  165 ttttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    |||||| |||||| | |||| ||||||||||| ||||| | |||||||| |||||||| ||||| |||||||||| | |||||||||||||||    
T  39811123 tttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctccaatag-tttttcattcaacac 39811032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 24431938 - 24431840
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaattttta-cctctccaatggttttttcattcaac 253  Q
    |||||||||| ||||||||||  ||||||| || |||| |||||||||| |||||| | | |||||| ||||| |||||||||| | |||||||||||||    
T  24431938 tcaacatccactttttcaattttcaacactccaaatcactttctctctt-attcaatact-attcaacttttaccctctccaat-gatttttcattcaac 24431842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 22351726 - 22351583
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||||||||||||| |  |||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||  ||||||||||  ||    
T  22351726 agaccatttacaatggtaatcaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccca 22351627  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22351626 ttcaatttttacctctccaatggttttttcattcaacaccctac 22351583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 43021713 - 43021846
Alignment:
Q  129 caatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattcaattttt 226  Q
    ||||||| ||||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||  |||||||||||||||||  ||||||||||||    
T  43021713 caatggtaacaaatattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 43021812  T
Q  227 acctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||| ||||||||||||||||||    
T  43021813 acctctccaatggttctttcattcaacaccctac 43021846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 1073196 - 1073052
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattc 215  Q
    |||||||||||||||||| | | | |||||||||||||||||||||| ||||||||||  ||||||| ||| |||||||||||||  |||||||||| ||    
T  1073196 aagaccatttacaatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactc 1073097  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  1073096 attcaatttttacctctccaatggttttttcattcaacactctac 1073052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 7588616 - 7588471
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct----taattcaacatt 214  Q
    ||||||||||||||||| | | | ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||    ||||||||||      
T  7588616 agaccatttacaatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaacacc 7588517  T
Q  215 cattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7588516 cattcaatttttacctctccaatggttttttcattcaacaccctac 7588471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 14382929 - 14383072
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||  | | |||||||| ||||||||||||||| |||||||||||| |||||| ||||||||||  |||||||||||||||||        
T  14382929 agaccatttacaatggcaaaatatattcaaaaaccctcaacatccactttttcaattcctaacactccacatcattttctctctcttaattcaacacctt 14383028  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14383029 ttcaatttttacctctccaatggttttttcattcaacaccctac 14383072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 4296847 - 4296740
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4296847 tcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattcaa 4296748  T
Q  253 caccctac 260  Q
    ||||||||    
T  4296747 caccctac 4296740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 12855017 - 12855124
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  12855017 tcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatggttttttcattcaa 12855116  T
Q  253 caccctac 260  Q
    ||||||||    
T  12855117 caccctac 12855124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 24997078 - 24997185
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  24997078 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatagttttttcattcaa 24997177  T
Q  253 caccctac 260  Q
    ||||||||    
T  24997178 caccctac 24997185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 30822659 - 30822552
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  30822659 tcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatggttttttcattcaa 30822560  T
Q  253 caccctac 260  Q
    ||||||||    
T  30822559 caccctac 30822552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 255
Target Start/End: Complemental strand, 17929367 - 17929229
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||| | ||||||| | |||| ||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||  ||    
T  17929367 agaccatgtgcaatggttaaaaattttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctcataatttaacaccca 17929268  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacac 255  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  17929267 ttcaatttttacatctccaatggttttttcattcaacac 17929229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 17485779 - 17485916
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattca 216  Q
    ||||||| | ||||| | |||||| ||||| | || |||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||| |||    
T  17485779 agaccatgtgcaatgcttacaaattttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactca 17485878  T
Q  217 ttcaatttttacctctccaatggttttttcattcaaca 254  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  17485879 ttcaatttttacctctctaatgattttttcattcaaca 17485916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 118 - 256
Target Start/End: Original strand, 36526782 - 36526922
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||  | | ||||||||||||||| |||| ||| ||||||||||||||||||| ||||| ||||  |||||||||||| ||||  |    
T  36526782 aagaccatttacaatggcaaaatatattcaacaacccttaacacccactttttcaattcccaacactccacattattttctctctcttaatttaacaccc 36526881  T
Q  216 attcaatttttacctctccaatggttttttcattcaacacc 256  Q
    ||| ||||||||||||||||||| |||||||||||||||||    
T  36526882 atttaatttttacctctccaatgattttttcattcaacacc 36526922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 8852055 - 8852162
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  8852055 tcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaatttttatctctccaatggttttttcattcaa 8852154  T
Q  253 caccctac 260  Q
    ||||||||    
T  8852155 caccctac 8852162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 254
Target Start/End: Original strand, 9117774 - 9117911
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    |||||||||| |||||| | | | |||||||||| ||||||| ||| ||||||||||  ||||||| ||  ||||||||||  ||||||||||||| |||    
T  9117774 agaccatttataatggtaaaacaaattcaacaactctcaacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacactca 9117873  T
Q  217 ttcaatttttacctctccaatggttttttcattcaaca 254  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9117874 ttcaatttttacctctccaatggttttttcattcaaca 9117911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 1308773 - 1308666
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||||  |||| |||||  |||| ||||||||| |||||||||||||||||||||||    
T  1308773 tcaacatccactttttcaatttccaacactccacatcattttctctctcataatccaacacacatttaatttttacttctccaatggttttttcattcaa 1308674  T
Q  253 caccctac 260  Q
    ||||||||    
T  1308673 caccctac 1308666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 260
Target Start/End: Original strand, 44279978 - 44280097
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| | |||| ||| ||||||||||  ||||||| ||||||||||||||  |||||||||||||  | ||||||||||||||||||||| ||    
T  44279978 attcaacaacctttaacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacaccctttcaatttttacctctccaatagt 44280077  T
Q  241 tttttcattcaacaccctac 260  Q
    ||||||||||||||||||||    
T  44280078 tttttcattcaacaccctac 44280097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 13151572 - 13151452
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatca--ttttctctcttaattcaacattcattcaattttta-cctctccaatgg 239  Q
    ||||||||||  |||||| ||| ||||||||||||||||||| ||||| |  |||| ||||||||||||||| |||||||| ||||| ||||||||||||    
T  13151572 attcaacaacattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccctctccaatgg 13151473  T
Q  240 ttttttcattcaacaccctac 260  Q
    |||||||||||||||| ||||    
T  13151472 ttttttcattcaacactctac 13151452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 14152155 - 14152040
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc--ttaattcaacattcattcaatttttacc-tctccaatgg 239  Q
    ||||||||||  |||||| ||| ||||||||||||||||||| ||||||||||||||||  |||||||||||  ||||||| ||||||| ||| ||||||    
T  14152155 attcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaacttttaccatcttcaatgg 14152056  T
Q  240 ttttttcattcaacac 255  Q
    ||||||||||||||||    
T  14152055 ttttttcattcaacac 14152040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 37245499 - 37245605
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||    
T  37245499 tcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaa 37245597  T
Q  253 caccctac 260  Q
    ||| ||||    
T  37245598 cactctac 37245605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 6362915 - 6363054
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    |||||||| ||||||||| | |   ||||||||||  |||||||||| |||||||||||| ||||||  |||||||||||||  ||||||||||||| ||    
T  6362915 aagaccatgtacaatggttaaacccattcaacaacggtcaacatccactttttcaattcc-aacactctacatcattttctctctcttaattcaacactc 6363013  T
Q  216 attcaattttta-cctctccaatggttttttcattcaacac 255  Q
    |||||| ||||| ||||| |||| |||||||||||||||||    
T  6363014 attcaacttttaccctctacaattgttttttcattcaacac 6363054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 39490141 - 39490247
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| || |||||| ||||  ||||||||||||| |||||||||||||| ||||||||| | ||||||||||||    
T  39490141 tcaacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaatttttatctctccaat-gatttttcattcaa 39490239  T
Q  253 caccctac 260  Q
    ||| ||||    
T  39490240 cactctac 39490247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 36209539 - 36209444
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctct--cttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| ||||||| |||||||||||||||  |||||||||||| |||||||||||||| |||||| |||| |||| |||||||||| ||||    
T  36209539 tttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaatttttatctctcctatgg-ttttccattcaacactctac 36209444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 9074289 - 9074194
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||| ||||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  9074289 ttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg-tttttcattcaacactctac 9074194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 927967 - 927861
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||| ||||||||||||| ||||||||||||||||| | |||||||| |||||||| |||||| ||||| ||||| ||||||||||||    
T  927967 tcaacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctctaatgg-tttttcattcaa 927869  T
Q  253 caccctac 260  Q
    ||| ||||    
T  927868 cactctac 927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 31193059 - 31192953
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| | |||||||||||| |||||||| ||||||||||||||||| | |||||| | |||||||| ||||| |||||||||||| ||||||||||||    
T  31193059 tcaacacctattttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatgg-tttttcattcaa 31192961  T
Q  253 caccctac 260  Q
    ||| ||||    
T  31192960 cactctac 31192953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 7763552 - 7763458
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| ||||||| |||||||||||||  ||||||||||||||  |||||||||||||  ||||||||  ||||||||||||||| |||||    
T  7763552 tttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttta--tctccaataattttttcattcaacatcctac 7763458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 1987117 - 1987223
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    ||||||| || ||||||||||| ||||||| ||||||||||||| ||| | |||||||| |||||||| ||||| |||||||||| | ||||||||||||    
T  1987117 tcaacattcactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctctccaat-gatttttcattcaa 1987215  T
Q  253 caccctac 260  Q
    ||| ||||    
T  1987216 cactctac 1987223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 31174260 - 31174155
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattt-tctctcttaattcaacattcattcaatttttacc-tctccaatggttttttcattcaa 252  Q
    |||| ||||| ||||||||||||||||||| ||||| |||| |||||||| |||||||| |||||||| ||||||| || ||||||| ||||||||||||    
T  31174260 tcaatatccactttttcaattcccaacactccacattatttatctctctt-attcaacactcattcaacttttaccatccccaatgg-tttttcattcaa 31174163  T
Q  253 caccctac 260  Q
    ||| ||||    
T  31174162 cactctac 31174155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 38901729 - 38901819
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacac 255  Q
    |||||||||||| |||||| ||||||||||||||||| | |||||||| || ||||| ||||| |||||||||||| |||||||||||||||    
T  38901729 tttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctccaatgg-tttttcattcaacac 38901819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 5146787 - 5146680
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattcattcaattttta-cctctccaatggttttttcattca 251  Q
    |||||| ||||||||| |||| |||||||| |||||||||||||  ||||| |||||||| ||||| || ||||| ||||| |||| | |||||||||||    
T  5146787 tcaacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactcatttaacttttaccctctgcaat-gatttttcattca 5146689  T
Q  252 acaccctac 260  Q
    |||||||||    
T  5146688 acaccctac 5146680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 38997370 - 38997290
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc 199  Q
    |||||||||||||||||   |||  |||||||||| |||||| ||| ||||||||||| ||||||  ||||||||||||||    
T  38997370 agaccatttacaatggttgaaaagtttcaacaaccttcaacacccactttttcaattcgcaacacaccacatcattttctc 38997290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 39434087 - 39433986
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaattttta-cctctccaatggttttttcattcaa 252  Q
    |||||| ||| |||||||||| |||||| | ||||||||||| |||| || ||| |||| |||||||| ||||| |||||||||| | ||||||||||||    
T  39434087 tcaacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaacttttatcctctccaat-gatttttcattcaa 39433989  T
Q  253 cac 255  Q
    |||    
T  39433988 cac 39433986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 36855838 - 36855758
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttt 244  Q
    ||||||||||||||||||| | ||| ||||| ||||| | |||||||| |||||||| ||||| ||||||||||| |||||    
T  36855838 tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctccaatgattttt 36855758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 6333466 - 6333406
Alignment:
Q  142 tattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctct 202  Q
    |||||||||||  |||||||||| |||||||||||| || | | || ||||||||||||||    
T  6333466 tattcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctct 6333406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 118 - 260
Target Start/End: Complemental strand, 5435 - 5291
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctct--cttaattcaacattc 215  Q
    |||||||||||||||||  | | |||||||| | ||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||||| |    
T  5435 aagaccatttacaatggcaaaatatattcaatacccctcaacacccactttttcaattcccaacactccacatcattttctctttcttaattcaacatcc 5336  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  5335 attcaatttttacctctccactggttttttcattcaacaccctac 5291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 6e-43; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 30446204 - 30446347
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattca 216  Q
    ||||||||||||||||| | | | |||||||||||||||||| |||||||||||||||| |||||| ||||||||||  |||||||||||||||||  ||    
T  30446204 agaccatttacaatggtaaaacaaattcaacaaccctcaacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacaccca 30446303  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||| |||||||||||||||| ||||    
T  30446304 ttcaatttttacctctccaatgattttttcattcaacactctac 30446347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 10883831 - 10883975
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattc 215  Q
    ||||||||||||||||||   |||  ||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||  |||||||||||||  |    
T  10883831 aagaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccc 10883930  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  10883931 attcaatttttacctctccaatgattttttcattcaacatcctac 10883975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 143 - 263
Target Start/End: Original strand, 8660543 - 8660665
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggt 240  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  8660543 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaatttttacctctccaatggt 8660642  T
Q  241 tttttcattcaacaccctactcc 263  Q
    ||||||||||||||||||| |||    
T  8660643 tttttcattcaacaccctantcc 8660665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 123 - 260
Target Start/End: Original strand, 8669854 - 8669992
Alignment:
Q  123 catttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattcattca 220  Q
    ||||||||||||| | | | ||||||||||| |||||||||| |||||||||| |||||||||||||| ||||  |||||||||||||||||  ||||||    
T  8669854 catttacaatggtaaaatacattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacccattca 8669953  T
Q  221 atttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8669954 atttttacctctccaatgg-tttttcattcaacaccctac 8669992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 24348393 - 24348536
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctctt--aattcaacattca 216  Q
    ||||||| |||||||||   |||| ||||| |||| |||||| ||| ||||||||||||||||||| ||||||||||||||||||  |||||||||| ||    
T  24348393 agaccatatacaatggttgaaaattttcaataaccatcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacatcca 24348492  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  24348493 ttcaatttttacctcttcaatggttttttcattcaacactctac 24348536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 260
Target Start/End: Original strand, 34838540 - 34838683
Alignment:
Q  118 aagaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattt--tctctcttaattcaacattc 215  Q
    |||||||||||||||||| | | | |||||| |||| ||||||  || ||||||||||||||||||| ||||||||||  |||||||||||||||||  |    
T  34838540 aagaccatttacaatggtaaaatacattcaataaccttcaacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacaccc 34838639  T
Q  216 attcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||||||||||||||||||||||||| ||||||||||||||    
T  34838640 attcaatttttacctctccaatggtttttt-attcaacaccctac 34838683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 631514 - 631621
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||    
T  631514 tcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactcattcaatttttacctctccaatggttttttcattcaa 631613  T
Q  253 caccctac 260  Q
    ||||||||    
T  631614 caccctac 631621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 34328277 - 34328384
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  34328277 tcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaa 34328376  T
Q  253 caccctac 260  Q
    ||||||||    
T  34328377 caccctac 34328384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Original strand, 197800 - 197907
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||  |||||||||||||  |||||||||||||| ||||||||| |||||||||||||    
T  197800 tcaacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaatttttacatctccaatgattttttcattcaa 197899  T
Q  253 caccctac 260  Q
    ||||||||    
T  197900 caccctac 197907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 17961339 - 17961232
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaa 252  Q
    |||||| ||| ||||||||||||||||||| ||||| |||||||||||  ||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  17961339 tcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaatttttacctctccaatggttttttcattcaa 17961240  T
Q  253 caccctac 260  Q
    ||||||||    
T  17961239 caccctac 17961232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 260
Target Start/End: Original strand, 12512898 - 12513016
Alignment:
Q  144 ttcaacaaccctcaacatccattttttcaattcccaacacttcacatcatttt--ctctcttaattcaacattcattcaatttttacctctccaatggtt 241  Q
    |||||||||||| |||||||| ||||||||||  ||||| | |||||||||||  ||||||||||||||||  |||||||||||||||||||||||| ||    
T  12512898 ttcaacaaccctgaacatccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaatttttacctctccaatgatt 12512997  T
Q  242 ttttcattcaacaccctac 260  Q
    |||||||||||||| ||||    
T  12512998 ttttcattcaacactctac 12513016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 12501792 - 12501935
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctc--tcttaattcaacattca 216  Q
    |||||||||| ||||||   |||  |||||||||||||| || ||| ||||||||||| ||||| | ||||||||||||||  |||||||||||||  ||    
T  12501792 agaccatttataatggttgaaaagtttcaacaaccctcaccacccactttttcaattctcaacaatccacatcattttctctctcttaattcaacaccca 12501891  T
Q  217 ttcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||    
T  12501892 ttcaatttttacctctctaatgattttttcattcaacactctac 12501935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 2503257 - 2503328
Alignment:
Q  189 atcattttctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  2503257 atcattttctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaacaccctac 2503328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 24933358 - 24933250
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaat--ttttacctctccaatggttttttcattc 250  Q
    ||||||||||||||||||||| | |||||| ||||| |||||||||||  |||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  24933358 tcaacatccattttttcaatttc-aacactccacattattttctctctcataattcaacactcattcaatatttttacctctccaatggttttttcattc 24933260  T
Q  251 aacaccctac 260  Q
    |||| |||||    
T  24933259 aacatcctac 24933250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 29428593 - 29428487
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||| |||||| ||||| ||||| ||||||||||||    
T  29428593 tcaacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctcaaatgg-tttttcattcaa 29428495  T
Q  253 caccctac 260  Q
    ||| ||||    
T  29428494 cactctac 29428487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 26654400 - 26654304
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| |||||||  |  |||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26654400 tttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaacaccctac 26654304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 26760370 - 26760274
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| |||||||  |  |||||||||||||  ||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  26760370 tttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaacaccctac 26760274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 260
Target Start/End: Original strand, 8218964 - 8219048
Alignment:
Q  178 caacacttcacatcattttctc--tcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||| ||||| ||||||||  |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttacctctccaatggttttttcattcaacactctac 8219048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 6380553 - 6380458
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||  ||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  6380553 tttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctccaatgg-tttttcattcaacactctac 6380458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 6725701 - 6725593
Alignment:
Q  154 ctcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattca 251  Q
    ||||||| ||| ||||||  ||||||||||| ||||||||||||||||| | |||||||| |||||||| ||||||  ||| ||||||||||||||||||    
T  6725701 ctcaacacccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattca 6725602  T
Q  252 acaccctac 260  Q
    |||| ||||    
T  6725601 acactctac 6725593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 12480277 - 12480384
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttct--ctcttaattcaacattca 216  Q
    |||||||||||||||||   |||  ||||||||||||||||||||| |||||||||| | ||||||  ||||||||||||  ||||||||||||||  ||    
T  12480277 agaccatttacaatggttgaaaagtttcaacaaccctcaacatccactttttcaatttcaaacactctacatcattttctcactcttaattcaacaccca 12480376  T
Q  217 ttcaattt 224  Q
    ||||||||    
T  12480377 ttcaattt 12480384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 32359753 - 32359841
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaattttta-cctctccaatggttttttcattcaac 253  Q
    ||||||||||||||||| | ||||||||||||||||| | |||||||| |||||| ||||||| |||||||||| | |||||||||||||    
T  32359753 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattccatttttaccctctccaatag-tttttcattcaac 32359841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 22627820 - 22627899
Alignment:
Q  143 attcaacaaccctcaacatccattttttcaattcccaacacttcacatcattttctctc-ttaattcaacattcattcaa 221  Q
    |||||||||| ||||||| |||  ||||||||| |||||||| |||||||||||||||| || ||||||||| |||||||    
T  22627820 attcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaa 22627899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 34242345 - 34242409
Alignment:
Q  196 tctctcttaattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    |||||||  ||||||||  ||||||||| |||||||||||||| |||||||||||||||| ||||    
T  34242345 tctctctctattcaacacccattcaattcttacctctccaatgattttttcattcaacactctac 34242409  T

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Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 34242232 - 34242297
Alignment:
Q  119 agaccatttacaatggtcacaaatattcaacaaccctcaacatccattttttcaattcccaacact 184  Q
    |||||||||||||||||   |||  |||||||||||||||||  || |||||||||||||||||||    
T  34242232 agaccatttacaatggttcaaaactttcaacaaccctcaacactcactttttcaattcccaacact 34242297  T

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Target: scaffold0016 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 260
Target Start/End: Complemental strand, 66136 - 66040
Alignment:
Q  166 tttttcaattcccaacacttcacatcattttctctct--taattcaacattcattcaatttttacctctccaatggttttttcattcaacaccctac 260  Q
    ||||||||||| ||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||    
T  66136 tttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttacctcttcaataattttttcattcaacaccctac 66040  T

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Target: scaffold0012 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 265
Target Start/End: Original strand, 124012 - 124121
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctcttaattcaacattcattcaatttttacc-tctccaatggttttttcattcaac 253  Q
    |||||||||| |||||||||| |||||||| ||||||||||| |||||| |||||||| |||||||| ||||||| |||||||||| |||||||||||||    
T  124012 tcaacatccactttttcaatttccaacactccacatcattttttctctt-attcaacactcattcaacttttaccatctccaatgg-tttttcattcaac 124109  T
Q  254 accctactcctc 265  Q
    || |||| ||||    
T  124110 actctacccctc 124121  T

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Target: scaffold0100 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 30613 - 30507
Alignment:
Q  155 tcaacatccattttttcaattcccaacacttcacatcattttctctct-taattcaacattcattcaatttttac-ctctccaatggttttttcattcaa 252  Q
    |||||||||| ||||||||||| ||||||| || || ||||||||||| | |||||||| | |||||| |||||| ||||||||||| ||||||||||||    
T  30613 tcaacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttattcaacttttactctctccaatgg-tttttcattcaa 30515  T
Q  253 caccctac 260  Q
    ||| ||||    
T  30514 cactctac 30507  T

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