View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2496_low_24 (Length: 213)
Name: NF2496_low_24
Description: NF2496
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2496_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 125; Significance: 1e-64; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 1323530 - 1323701
Alignment:
| Q |
14 |
gagaagaaatgggaaagggctatgatgaagctattgaagaactccaaaaattgttgaggtaaatctcaaacaccttctcctattagaattatataaacaa |
113 |
Q |
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| T |
1323530 |
gagaagaaatgggaaagggctatgatgaagctattgaagaactccaaaaattgttgaggtaaatctcaaacaacttctcctattagaattatatacacaa |
1323629 |
T |
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| Q |
114 |
tattaattcattcatcgttaacgtaaatattttttacaccgtcagtcgttcataattgtcaaatcattaaaataacctaactt |
196 |
Q |
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| T |
1323630 |
tattaattcattcatc-----------tattttttacaccgtcaatcgttcataattatcagatcattaaaataacctaactt |
1323701 |
T |
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