View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2498_high_42 (Length: 262)
Name: NF2498_high_42
Description: NF2498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2498_high_42 |
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Alignment Details
Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 52996814 - 52996918
Alignment:
| Q |
1 |
gtttcacacaaaaataaa-gaagttaataaaaaattactttaaaggaatgtggtactataattgatattactttgtatttcaatttacttgatatataaa |
99 |
Q |
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| T |
52996814 |
gtttcacacaaaaaaaaaagaagttaataaaaaattactttaaaggaatgtggtactataattgatattactttgtatttcaatttacttgatatataaa |
52996913 |
T |
|
| Q |
100 |
actac |
104 |
Q |
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||||| |
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| T |
52996914 |
actac |
52996918 |
T |
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